Query 040501
Match_columns 228
No_of_seqs 164 out of 1302
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 09:05:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040501.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040501hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0581 Mitogen-activated prot 100.0 1.2E-51 2.5E-56 306.7 16.1 212 2-224 121-334 (364)
2 KOG0615 Serine/threonine prote 100.0 8.2E-52 1.8E-56 310.7 12.6 209 4-224 222-436 (475)
3 KOG0591 NIMA (never in mitosis 100.0 1.7E-50 3.8E-55 290.5 9.1 215 2-224 62-280 (375)
4 KOG0575 Polo-like serine/threo 100.0 6E-49 1.3E-53 308.0 17.3 207 2-224 62-268 (592)
5 KOG0192 Tyrosine kinase specif 100.0 6.9E-48 1.5E-52 297.9 18.9 213 2-227 83-301 (362)
6 KOG0197 Tyrosine kinases [Sign 100.0 2.1E-48 4.6E-53 301.3 14.4 212 3-227 246-459 (468)
7 KOG0598 Ribosomal protein S6 k 100.0 1.2E-46 2.6E-51 279.9 14.9 201 2-217 69-269 (357)
8 KOG0578 p21-activated serine/t 100.0 7.2E-47 1.6E-51 294.2 14.2 209 2-224 314-522 (550)
9 KOG0595 Serine/threonine-prote 100.0 1.5E-45 3.2E-50 276.8 15.6 207 2-222 53-265 (429)
10 KOG0583 Serine/threonine prote 100.0 7.4E-45 1.6E-49 283.3 18.4 207 3-224 64-274 (370)
11 KOG0582 Ste20-like serine/thre 100.0 8.5E-45 1.8E-49 275.5 17.8 213 2-224 68-292 (516)
12 KOG0198 MEKK and related serin 100.0 2.6E-45 5.6E-50 276.0 14.0 210 3-225 59-276 (313)
13 KOG0592 3-phosphoinositide-dep 100.0 5.9E-45 1.3E-49 282.1 16.0 206 3-224 118-337 (604)
14 KOG0593 Predicted protein kina 100.0 2.4E-45 5.1E-50 266.5 11.4 216 3-224 46-283 (396)
15 KOG0589 Serine/threonine prote 100.0 9.1E-45 2E-49 280.0 13.4 211 2-225 47-258 (426)
16 KOG1187 Serine/threonine prote 100.0 2.3E-43 4.9E-48 274.4 20.1 224 3-227 116-350 (361)
17 PHA02988 hypothetical protein; 100.0 1.6E-42 3.4E-47 264.6 18.7 208 3-227 63-277 (283)
18 KOG1026 Nerve growth factor re 100.0 3.7E-43 8.1E-48 284.9 15.9 214 2-227 533-760 (774)
19 KOG0599 Phosphorylase kinase g 100.0 1.3E-43 2.8E-48 254.6 10.8 209 3-224 67-282 (411)
20 KOG0661 MAPK related serine/th 100.0 2E-43 4.4E-48 269.8 12.1 213 6-225 56-291 (538)
21 KOG0616 cAMP-dependent protein 100.0 1.2E-42 2.6E-47 251.5 15.4 194 4-216 90-283 (355)
22 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.7E-42 5.8E-47 269.8 18.6 215 3-228 55-333 (338)
23 cd05571 STKc_PKB Catalytic dom 100.0 1.3E-42 2.8E-47 269.8 16.4 206 3-224 40-250 (323)
24 cd05585 STKc_YPK1_like Catalyt 100.0 2.1E-42 4.6E-47 267.5 15.9 204 3-222 38-241 (312)
25 KOG0033 Ca2+/calmodulin-depend 100.0 1E-42 2.2E-47 246.3 12.5 210 2-224 54-266 (355)
26 cd05096 PTKc_DDR1 Catalytic do 100.0 3.7E-42 8.1E-47 265.3 16.9 221 2-228 63-304 (304)
27 KOG0201 Serine/threonine prote 100.0 8.7E-44 1.9E-48 269.4 6.8 207 3-224 56-262 (467)
28 KOG0588 Serine/threonine prote 100.0 2.8E-42 6.1E-47 272.8 15.5 204 4-224 58-262 (786)
29 KOG2345 Serine/threonine prote 100.0 1.5E-42 3.2E-47 245.3 11.9 217 2-227 62-298 (302)
30 cd05048 PTKc_Ror Catalytic Dom 100.0 2.4E-41 5.1E-46 258.3 19.3 214 3-228 53-282 (283)
31 KOG0600 Cdc2-related protein k 100.0 3.9E-42 8.5E-47 264.5 14.8 214 5-224 163-399 (560)
32 cd05595 STKc_PKB_beta Catalyti 100.0 8.5E-42 1.8E-46 265.2 16.6 206 3-224 40-250 (323)
33 cd05584 STKc_p70S6K Catalytic 100.0 1.3E-41 2.7E-46 264.3 17.3 206 3-224 45-255 (323)
34 KOG0597 Serine-threonine prote 100.0 1.6E-42 3.4E-47 270.3 12.0 205 3-224 46-250 (808)
35 cd05593 STKc_PKB_gamma Catalyt 100.0 1.3E-41 2.8E-46 264.7 17.1 206 3-224 40-250 (328)
36 KOG0611 Predicted serine/threo 100.0 4.2E-42 9E-47 259.0 13.7 203 4-224 99-302 (668)
37 cd06649 PKc_MEK2 Catalytic dom 100.0 3.9E-41 8.5E-46 262.4 19.2 213 3-224 48-300 (331)
38 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.5E-41 9.8E-46 254.6 19.0 212 3-228 51-264 (266)
39 PTZ00267 NIMA-related protein 100.0 2.5E-41 5.4E-46 274.7 18.6 210 3-224 110-322 (478)
40 cd05049 PTKc_Trk Catalytic dom 100.0 5.5E-41 1.2E-45 255.9 19.4 215 2-228 52-280 (280)
41 cd05094 PTKc_TrkC Catalytic do 100.0 4.2E-41 9.2E-46 257.9 18.8 214 2-227 51-280 (291)
42 PTZ00263 protein kinase A cata 100.0 1.6E-41 3.5E-46 264.3 16.4 203 3-224 63-270 (329)
43 cd05631 STKc_GRK4 Catalytic do 100.0 2E-41 4.3E-46 259.0 16.6 210 4-224 46-260 (285)
44 cd08228 STKc_Nek6 Catalytic do 100.0 4.2E-41 9.1E-46 254.9 18.1 217 3-228 47-264 (267)
45 cd05582 STKc_RSK_N N-terminal 100.0 4.2E-42 9.1E-47 266.5 12.7 203 3-221 43-245 (318)
46 cd05612 STKc_PRKX_like Catalyt 100.0 1.1E-41 2.3E-46 261.2 14.7 203 3-224 46-253 (291)
47 KOG0032 Ca2+/calmodulin-depend 100.0 4.8E-41 1E-45 261.9 18.4 209 2-224 79-292 (382)
48 cd08229 STKc_Nek7 Catalytic do 100.0 5E-41 1.1E-45 254.5 18.1 217 3-228 47-264 (267)
49 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.9E-41 6.3E-46 258.4 16.9 216 3-224 48-284 (288)
50 cd05093 PTKc_TrkB Catalytic do 100.0 7.1E-41 1.5E-45 256.3 18.7 214 3-228 52-278 (288)
51 cd07848 STKc_CDKL5 Catalytic d 100.0 2.2E-41 4.7E-46 259.0 15.8 216 3-224 45-283 (287)
52 cd05084 PTKc_Fes Catalytic dom 100.0 1.3E-40 2.8E-45 250.2 19.5 212 3-228 38-252 (252)
53 cd08529 STKc_FA2-like Catalyti 100.0 6.8E-41 1.5E-45 252.1 18.0 210 2-224 43-252 (256)
54 cd05052 PTKc_Abl Catalytic dom 100.0 1.1E-40 2.4E-45 252.1 18.9 213 3-228 47-261 (263)
55 cd05608 STKc_GRK1 Catalytic do 100.0 4.2E-41 9.1E-46 256.6 16.7 213 3-224 38-256 (280)
56 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.3E-40 2.9E-45 250.7 19.2 212 2-227 43-256 (256)
57 KOG0659 Cdk activating kinase 100.0 3.5E-41 7.7E-46 240.5 15.0 216 4-225 47-281 (318)
58 cd05588 STKc_aPKC Catalytic do 100.0 3.9E-41 8.4E-46 262.2 16.5 207 3-219 40-250 (329)
59 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.6E-40 3.5E-45 251.6 19.5 218 2-228 46-264 (267)
60 PTZ00426 cAMP-dependent protei 100.0 3.9E-41 8.4E-46 262.9 16.5 203 3-224 76-283 (340)
61 PHA03212 serine/threonine kina 100.0 1.2E-40 2.6E-45 264.2 19.4 216 2-224 127-375 (391)
62 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.3E-40 2.9E-45 251.3 18.8 214 2-228 46-260 (261)
63 cd05607 STKc_GRK7 Catalytic do 100.0 5.8E-41 1.3E-45 255.4 16.9 212 4-225 39-250 (277)
64 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.6E-41 5.6E-46 264.2 15.3 215 3-224 44-289 (338)
65 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.9E-41 8.5E-46 262.7 16.1 207 3-224 46-256 (333)
66 cd05594 STKc_PKB_alpha Catalyt 100.0 2.1E-41 4.5E-46 263.4 14.4 206 3-224 40-251 (325)
67 cd05104 PTKc_Kit Catalytic dom 100.0 6.9E-41 1.5E-45 264.8 17.6 216 2-228 82-373 (375)
68 PLN00034 mitogen-activated pro 100.0 4.5E-41 9.8E-46 264.2 16.4 207 2-224 116-327 (353)
69 cd05106 PTKc_CSF-1R Catalytic 100.0 4.9E-41 1.1E-45 265.5 16.5 215 3-228 86-371 (374)
70 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.6E-40 3.5E-45 250.2 18.5 212 2-227 43-256 (256)
71 KOG4721 Serine/threonine prote 100.0 1.6E-41 3.4E-46 265.1 13.1 207 6-227 160-366 (904)
72 cd05062 PTKc_IGF-1R Catalytic 100.0 1.6E-40 3.4E-45 253.0 18.5 214 3-228 54-277 (277)
73 KOG0660 Mitogen-activated prot 100.0 1.9E-41 4.1E-46 251.4 12.7 216 2-224 65-309 (359)
74 cd05072 PTKc_Lyn Catalytic dom 100.0 2.2E-40 4.7E-45 250.2 18.5 214 2-228 45-260 (261)
75 cd05092 PTKc_TrkA Catalytic do 100.0 2.4E-40 5.2E-45 252.4 18.9 214 3-228 52-280 (280)
76 cd05590 STKc_nPKC_eta Catalyti 100.0 7E-41 1.5E-45 259.8 16.1 201 3-219 40-241 (320)
77 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.1E-40 2.4E-45 256.9 17.0 210 4-224 49-287 (303)
78 KOG0585 Ca2+/calmodulin-depend 100.0 3.7E-41 8E-46 257.5 14.0 208 3-224 153-371 (576)
79 KOG0194 Protein tyrosine kinas 100.0 2.3E-41 4.9E-46 265.7 13.2 212 2-227 205-418 (474)
80 cd06650 PKc_MEK1 Catalytic dom 100.0 2.7E-40 5.8E-45 257.8 19.0 213 3-224 48-298 (333)
81 cd05116 PTKc_Syk Catalytic dom 100.0 4.1E-40 8.8E-45 248.2 19.3 210 3-228 41-254 (257)
82 cd05115 PTKc_Zap-70 Catalytic 100.0 4.1E-40 8.8E-45 248.2 19.1 211 3-228 40-254 (257)
83 cd05033 PTKc_EphR Catalytic do 100.0 4E-40 8.7E-45 249.4 19.1 213 2-228 49-264 (266)
84 PF07714 Pkinase_Tyr: Protein 100.0 2.7E-41 5.9E-46 254.8 12.6 212 2-226 45-259 (259)
85 cd05591 STKc_nPKC_epsilon Cata 100.0 1.1E-40 2.4E-45 258.9 16.3 206 3-224 40-253 (321)
86 cd05068 PTKc_Frk_like Catalyti 100.0 7.4E-40 1.6E-44 247.3 20.2 214 2-228 45-260 (261)
87 cd05059 PTKc_Tec_like Catalyti 100.0 3.9E-40 8.5E-45 248.1 18.6 211 3-227 44-256 (256)
88 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.3E-40 2.7E-45 259.1 16.3 208 3-219 40-248 (327)
89 cd05589 STKc_PKN Catalytic dom 100.0 2E-40 4.2E-45 257.8 17.3 205 3-224 44-256 (324)
90 cd05618 STKc_aPKC_iota Catalyt 100.0 1.5E-40 3.3E-45 258.8 16.7 207 3-219 40-250 (329)
91 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.7E-40 8.1E-45 251.7 18.5 218 2-228 50-280 (283)
92 KOG0610 Putative serine/threon 100.0 3.3E-40 7.1E-45 248.5 17.7 209 3-223 122-390 (459)
93 cd00192 PTKc Catalytic domain 100.0 4.8E-40 1E-44 248.1 18.8 214 2-227 40-262 (262)
94 cd05570 STKc_PKC Catalytic dom 100.0 1.6E-40 3.4E-45 257.7 16.5 206 3-224 40-251 (318)
95 cd05090 PTKc_Ror1 Catalytic do 100.0 6.6E-40 1.4E-44 250.4 19.3 214 3-228 52-282 (283)
96 cd05596 STKc_ROCK Catalytic do 100.0 2E-40 4.4E-45 261.7 16.9 209 3-224 88-303 (370)
97 cd08221 STKc_Nek9 Catalytic do 100.0 6.2E-40 1.3E-44 247.0 18.7 211 3-226 44-254 (256)
98 cd05614 STKc_MSK2_N N-terminal 100.0 1.4E-40 3.1E-45 259.4 15.7 210 3-224 49-266 (332)
99 cd05032 PTKc_InsR_like Catalyt 100.0 4.5E-40 9.7E-45 250.5 17.8 214 3-228 54-277 (277)
100 cd05592 STKc_nPKC_theta_delta 100.0 3E-40 6.5E-45 255.8 17.1 204 4-223 41-246 (316)
101 KOG0604 MAP kinase-activated p 100.0 1.5E-40 3.2E-45 241.3 14.2 217 1-224 97-321 (400)
102 cd05575 STKc_SGK Catalytic dom 100.0 1.9E-40 4E-45 257.8 15.9 201 4-220 41-242 (323)
103 cd06613 STKc_MAP4K3_like Catal 100.0 8.3E-40 1.8E-44 247.0 18.8 212 2-224 44-259 (262)
104 KOG1095 Protein tyrosine kinas 100.0 3.3E-41 7.2E-46 282.3 12.2 213 2-227 739-959 (1025)
105 cd05053 PTKc_FGFR Catalytic do 100.0 4.7E-40 1E-44 252.3 17.6 214 3-228 60-290 (293)
106 cd05051 PTKc_DDR Catalytic dom 100.0 7.1E-40 1.5E-44 251.7 18.5 218 2-228 63-296 (296)
107 cd05573 STKc_ROCK_NDR_like Cat 100.0 8.4E-41 1.8E-45 262.6 13.6 209 3-224 46-284 (350)
108 cd05040 PTKc_Ack_like Catalyti 100.0 8.4E-40 1.8E-44 246.4 18.5 214 2-228 40-257 (257)
109 cd05602 STKc_SGK1 Catalytic do 100.0 1.9E-40 4.2E-45 257.9 15.5 203 5-223 42-245 (325)
110 KOG1989 ARK protein kinase fam 100.0 1.1E-40 2.3E-45 271.5 14.5 210 4-227 80-309 (738)
111 cd08219 STKc_Nek3 Catalytic do 100.0 5.3E-40 1.1E-44 247.3 17.3 210 3-225 43-252 (255)
112 cd05620 STKc_nPKC_delta Cataly 100.0 3.4E-40 7.4E-45 255.5 16.7 204 4-223 41-246 (316)
113 cd06646 STKc_MAP4K5 Catalytic 100.0 4.6E-40 9.9E-45 249.2 16.9 212 3-226 51-266 (267)
114 cd05091 PTKc_Ror2 Catalytic do 100.0 9.2E-40 2E-44 249.6 18.4 213 3-227 53-281 (283)
115 cd05055 PTKc_PDGFR Catalytic d 100.0 1.1E-39 2.4E-44 251.2 19.0 214 3-228 83-300 (302)
116 cd06645 STKc_MAP4K3 Catalytic 100.0 9.2E-40 2E-44 247.6 17.9 209 4-224 52-264 (267)
117 cd05045 PTKc_RET Catalytic dom 100.0 8.8E-40 1.9E-44 250.5 17.9 214 3-228 48-285 (290)
118 KOG0694 Serine/threonine prote 100.0 2.1E-40 4.6E-45 263.2 14.7 202 1-219 411-613 (694)
119 cd05089 PTKc_Tie1 Catalytic do 100.0 1.1E-39 2.3E-44 250.8 18.3 212 3-227 47-273 (297)
120 cd05069 PTKc_Yes Catalytic dom 100.0 2.2E-39 4.7E-44 244.6 19.7 212 3-228 46-259 (260)
121 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.9E-39 4E-44 245.0 19.3 213 2-228 45-259 (260)
122 cd05060 PTKc_Syk_like Catalyti 100.0 1.7E-39 3.6E-44 244.8 19.0 210 3-228 41-254 (257)
123 cd07861 STKc_CDK1_euk Catalyti 100.0 6.5E-40 1.4E-44 250.6 16.9 218 3-224 44-281 (285)
124 cd05097 PTKc_DDR_like Catalyti 100.0 8.6E-40 1.9E-44 251.1 17.6 220 3-228 62-295 (295)
125 cd05619 STKc_nPKC_theta Cataly 100.0 7.5E-40 1.6E-44 253.5 17.3 204 4-223 41-246 (316)
126 cd06625 STKc_MEKK3_like Cataly 100.0 1.9E-39 4E-44 245.3 19.0 208 3-225 49-260 (263)
127 cd05066 PTKc_EphR_A Catalytic 100.0 2.1E-39 4.5E-44 245.7 19.2 213 2-228 49-265 (267)
128 cd05095 PTKc_DDR2 Catalytic do 100.0 1.3E-39 2.8E-44 250.3 18.2 221 2-228 63-296 (296)
129 cd05599 STKc_NDR_like Catalyti 100.0 3.4E-40 7.5E-45 260.3 15.4 209 3-224 46-295 (364)
130 cd05047 PTKc_Tie Catalytic dom 100.0 1.6E-39 3.4E-44 246.7 18.4 213 3-228 40-267 (270)
131 cd05044 PTKc_c-ros Catalytic d 100.0 1.9E-39 4.2E-44 246.0 18.8 215 2-228 43-269 (269)
132 cd06643 STKc_SLK Catalytic dom 100.0 1.8E-39 4E-44 247.8 18.7 210 3-224 47-261 (282)
133 cd05601 STKc_CRIK Catalytic do 100.0 1.5E-40 3.2E-45 259.2 12.9 210 3-224 46-262 (330)
134 cd05604 STKc_SGK3 Catalytic do 100.0 2.6E-40 5.7E-45 257.2 14.1 202 4-221 41-243 (325)
135 cd05605 STKc_GRK4_like Catalyt 100.0 6E-40 1.3E-44 250.8 15.8 211 3-224 45-260 (285)
136 cd05088 PTKc_Tie2 Catalytic do 100.0 9.7E-40 2.1E-44 251.7 17.1 212 3-227 52-278 (303)
137 cd05587 STKc_cPKC Catalytic do 100.0 1E-39 2.2E-44 253.8 17.3 201 3-219 45-246 (324)
138 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.8E-39 6E-44 245.1 19.3 213 2-228 50-266 (268)
139 cd06654 STKc_PAK1 Catalytic do 100.0 1.4E-39 3.1E-44 250.0 17.9 208 3-224 62-269 (296)
140 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.3E-39 2.9E-44 258.5 18.2 216 2-228 84-396 (400)
141 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.2E-39 4.8E-44 249.9 19.0 214 3-228 65-295 (304)
142 cd05603 STKc_SGK2 Catalytic do 100.0 5.1E-40 1.1E-44 255.2 15.5 201 4-220 41-242 (321)
143 cd05071 PTKc_Src Catalytic dom 100.0 3.2E-39 6.9E-44 244.0 19.4 213 2-228 45-259 (262)
144 KOG0605 NDR and related serine 100.0 3E-40 6.6E-45 255.8 13.9 203 3-218 186-435 (550)
145 KOG0193 Serine/threonine prote 100.0 1.4E-40 3.1E-45 260.8 12.2 213 3-227 433-651 (678)
146 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.1E-39 4.5E-44 246.9 18.4 214 3-228 54-277 (277)
147 cd06612 STKc_MST1_2 Catalytic 100.0 2.1E-39 4.6E-44 244.0 18.1 210 3-224 43-252 (256)
148 cd05050 PTKc_Musk Catalytic do 100.0 2.5E-39 5.5E-44 247.7 18.4 214 3-228 53-288 (288)
149 KOG0584 Serine/threonine prote 100.0 2.9E-40 6.3E-45 260.0 13.4 208 2-224 85-295 (632)
150 cd05621 STKc_ROCK2 Catalytic d 100.0 8.6E-40 1.9E-44 257.9 16.2 209 3-224 88-303 (370)
151 cd05039 PTKc_Csk_like Catalyti 100.0 3.9E-39 8.4E-44 242.7 19.0 211 2-228 44-255 (256)
152 cd05626 STKc_LATS2 Catalytic d 100.0 1.3E-39 2.9E-44 258.3 17.3 210 3-224 46-304 (381)
153 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.3E-39 2.9E-44 251.6 16.7 216 3-224 49-285 (309)
154 cd05082 PTKc_Csk Catalytic dom 100.0 4.9E-39 1.1E-43 242.2 19.2 210 3-228 44-255 (256)
155 cd05085 PTKc_Fer Catalytic dom 100.0 5.6E-39 1.2E-43 241.0 19.5 211 3-227 37-249 (250)
156 cd06611 STKc_SLK_like Catalyti 100.0 2.5E-39 5.5E-44 246.8 17.7 210 3-224 47-261 (280)
157 cd05625 STKc_LATS1 Catalytic d 100.0 1.2E-39 2.6E-44 258.7 16.5 209 3-224 46-304 (382)
158 cd05058 PTKc_Met_Ron Catalytic 100.0 3.2E-39 7E-44 243.9 18.0 212 3-228 41-258 (262)
159 cd06644 STKc_STK10_LOK Catalyt 100.0 6E-39 1.3E-43 246.1 19.8 210 3-224 54-268 (292)
160 cd05629 STKc_NDR_like_fungal C 100.0 8.6E-40 1.9E-44 259.1 15.5 209 3-224 46-304 (377)
161 cd06655 STKc_PAK2 Catalytic do 100.0 3.4E-39 7.3E-44 247.9 18.3 209 2-224 60-268 (296)
162 cd05075 PTKc_Axl Catalytic dom 100.0 3.8E-39 8.2E-44 244.8 18.4 214 3-228 45-270 (272)
163 cd07862 STKc_CDK6 Catalytic do 100.0 1.8E-39 3.8E-44 248.8 16.6 209 4-224 47-286 (290)
164 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.9E-39 6.2E-44 249.6 17.8 214 3-228 68-298 (307)
165 cd05598 STKc_LATS Catalytic do 100.0 6E-40 1.3E-44 259.9 14.3 209 3-224 46-300 (376)
166 cd05628 STKc_NDR1 Catalytic do 100.0 2.1E-39 4.6E-44 255.6 17.3 210 3-224 46-292 (363)
167 cd05042 PTKc_Aatyk Catalytic d 100.0 3E-39 6.5E-44 245.0 17.5 215 3-227 40-268 (269)
168 cd05035 PTKc_Axl_like Catalyti 100.0 4.7E-39 1E-43 244.3 18.6 214 3-228 46-271 (273)
169 cd05034 PTKc_Src_like Catalyti 100.0 4.4E-39 9.6E-44 243.0 18.3 214 2-228 45-260 (261)
170 cd06609 STKc_MST3_like Catalyt 100.0 4.1E-39 8.8E-44 244.9 18.1 207 3-224 44-250 (274)
171 cd08223 STKc_Nek4 Catalytic do 100.0 5.1E-39 1.1E-43 242.1 18.5 209 3-224 44-253 (257)
172 KOG0579 Ste20-like serine/thre 100.0 3.7E-40 8E-45 260.6 12.7 210 3-224 74-288 (1187)
173 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.2E-39 1.1E-43 242.6 18.5 213 2-228 45-259 (260)
174 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.5E-39 9.7E-44 249.2 18.5 213 3-227 62-291 (314)
175 cd05616 STKc_cPKC_beta Catalyt 100.0 1.9E-39 4.1E-44 252.1 16.4 200 4-219 46-246 (323)
176 cd05046 PTK_CCK4 Pseudokinase 100.0 7E-39 1.5E-43 243.7 19.0 215 3-228 53-275 (275)
177 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.5E-39 7.6E-44 243.7 17.2 204 3-226 49-261 (262)
178 KOG0663 Protein kinase PITSLRE 100.0 8.9E-40 1.9E-44 240.3 13.4 214 5-224 122-360 (419)
179 KOG0580 Serine/threonine prote 100.0 3.1E-40 6.8E-45 232.4 10.5 206 3-224 67-272 (281)
180 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 8.2E-39 1.8E-43 241.2 18.9 204 3-227 46-259 (259)
181 PHA03207 serine/threonine kina 100.0 2.2E-39 4.8E-44 257.7 16.6 214 4-224 132-374 (392)
182 cd05108 PTKc_EGFR Catalytic do 100.0 4.5E-39 9.8E-44 249.4 18.0 210 3-227 54-266 (316)
183 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.5E-39 9.8E-44 244.0 17.6 214 3-227 40-268 (269)
184 KOG0594 Protein kinase PCTAIRE 100.0 3.4E-39 7.4E-44 239.6 16.2 217 5-225 57-302 (323)
185 cd05622 STKc_ROCK1 Catalytic d 100.0 2.9E-39 6.3E-44 255.1 16.9 209 3-224 88-303 (371)
186 cd05054 PTKc_VEGFR Catalytic d 100.0 4.8E-39 1E-43 251.0 17.9 215 3-228 55-332 (337)
187 cd06619 PKc_MKK5 Catalytic dom 100.0 6.4E-39 1.4E-43 244.4 18.2 208 3-224 44-252 (279)
188 cd05111 PTK_HER3 Pseudokinase 100.0 1.1E-38 2.3E-43 243.2 19.3 210 3-227 54-266 (279)
189 cd05041 PTKc_Fes_like Catalyti 100.0 1.3E-38 2.7E-43 239.2 19.2 213 2-228 36-251 (251)
190 cd08218 STKc_Nek1 Catalytic do 100.0 5.2E-39 1.1E-43 242.0 17.1 209 3-224 44-252 (256)
191 cd05630 STKc_GRK6 Catalytic do 100.0 3E-39 6.5E-44 246.9 15.9 210 4-224 46-260 (285)
192 cd05061 PTKc_InsR Catalytic do 100.0 8.1E-39 1.8E-43 245.0 18.3 214 3-228 54-277 (288)
193 cd06640 STKc_MST4 Catalytic do 100.0 1.6E-38 3.5E-43 242.0 19.7 206 3-224 47-252 (277)
194 cd06628 STKc_MAPKKK_Byr2_like 100.0 7.9E-39 1.7E-43 242.4 18.0 207 3-224 51-263 (267)
195 cd06659 STKc_PAK6 Catalytic do 100.0 3.3E-39 7.1E-44 248.1 16.0 209 2-224 62-270 (297)
196 PF00069 Pkinase: Protein kina 100.0 5.2E-40 1.1E-44 247.8 11.4 211 5-224 45-256 (260)
197 cd05112 PTKc_Itk Catalytic dom 100.0 1.3E-38 2.8E-43 239.8 18.9 211 3-227 44-256 (256)
198 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.3E-39 1.2E-43 244.7 17.0 206 3-224 47-252 (277)
199 cd05065 PTKc_EphR_B Catalytic 100.0 1.2E-38 2.6E-43 241.7 18.8 213 2-228 49-267 (269)
200 cd05083 PTKc_Chk Catalytic dom 100.0 1.5E-38 3.1E-43 239.3 18.9 209 3-228 44-253 (254)
201 cd05073 PTKc_Hck Catalytic dom 100.0 1.6E-38 3.5E-43 239.9 19.2 212 3-228 46-259 (260)
202 cd06615 PKc_MEK Catalytic doma 100.0 1.1E-38 2.4E-43 246.4 18.7 213 3-225 44-287 (308)
203 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 6.9E-39 1.5E-43 243.6 17.2 205 3-227 61-274 (274)
204 cd05056 PTKc_FAK Catalytic dom 100.0 1.1E-38 2.4E-43 242.1 18.2 211 2-227 51-263 (270)
205 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.1E-38 2.4E-43 243.7 18.4 218 3-228 51-282 (284)
206 cd06605 PKc_MAPKK Catalytic do 100.0 4.6E-39 1E-43 243.4 16.1 213 2-224 43-256 (265)
207 cd06658 STKc_PAK5 Catalytic do 100.0 3.1E-39 6.7E-44 247.6 15.2 209 3-225 64-272 (292)
208 cd07847 STKc_CDKL1_4 Catalytic 100.0 7E-39 1.5E-43 245.0 17.2 213 3-224 45-282 (286)
209 cd06624 STKc_ASK Catalytic dom 100.0 1.1E-38 2.4E-43 241.8 18.0 212 3-224 50-264 (268)
210 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.4E-38 3E-43 240.0 18.2 204 3-227 44-258 (258)
211 cd06648 STKc_PAK_II Catalytic 100.0 1E-38 2.2E-43 244.0 17.6 208 3-224 61-268 (285)
212 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.2E-38 2.6E-43 241.3 17.9 213 3-224 44-263 (267)
213 cd06656 STKc_PAK3 Catalytic do 100.0 8.1E-39 1.8E-43 245.9 17.0 208 3-224 61-268 (297)
214 cd07868 STKc_CDK8 Catalytic do 100.0 1.3E-38 2.8E-43 247.0 18.3 160 3-166 43-218 (317)
215 smart00219 TyrKc Tyrosine kina 100.0 1.6E-38 3.5E-43 239.4 18.3 212 2-226 45-258 (258)
216 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.6E-38 3.5E-43 248.1 18.9 214 3-228 62-292 (334)
217 cd07876 STKc_JNK2 Catalytic do 100.0 8.5E-39 1.8E-43 251.9 17.4 212 3-224 65-314 (359)
218 PTZ00283 serine/threonine prot 100.0 7.6E-39 1.7E-43 260.5 17.7 210 3-224 76-296 (496)
219 cd08227 PK_STRAD_alpha Pseudok 100.0 1.6E-38 3.4E-43 247.5 18.6 218 3-224 44-306 (327)
220 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1E-38 2.3E-43 243.7 17.2 220 2-228 50-282 (284)
221 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1E-38 2.2E-43 245.9 17.2 216 3-224 49-285 (301)
222 KOG4257 Focal adhesion tyrosin 100.0 3.6E-39 7.9E-44 254.1 14.6 212 1-227 434-647 (974)
223 KOG4717 Serine/threonine prote 100.0 7.6E-39 1.7E-43 247.8 16.1 206 3-224 62-269 (864)
224 cd05043 PTK_Ryk Pseudokinase d 100.0 2.3E-38 4.9E-43 241.5 18.6 213 3-227 53-274 (280)
225 cd07839 STKc_CDK5 Catalytic do 100.0 3.8E-39 8.1E-44 246.3 14.3 211 3-224 44-280 (284)
226 cd05615 STKc_cPKC_alpha Cataly 100.0 8.5E-39 1.8E-43 248.4 16.5 201 3-219 45-246 (323)
227 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.9E-38 4.1E-43 242.5 17.9 218 3-228 50-282 (284)
228 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1E-38 2.2E-43 244.2 16.4 211 3-224 44-261 (286)
229 PHA03211 serine/threonine kina 100.0 1.1E-38 2.3E-43 256.3 17.3 216 4-225 206-455 (461)
230 KOG0596 Dual specificity; seri 100.0 6.1E-39 1.3E-43 249.4 15.2 209 3-224 404-626 (677)
231 cd05627 STKc_NDR2 Catalytic do 100.0 3E-39 6.4E-44 254.6 13.5 208 3-223 46-291 (360)
232 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.7E-38 5.9E-43 239.7 18.3 216 2-227 39-267 (268)
233 cd06631 STKc_YSK4 Catalytic do 100.0 1.2E-38 2.7E-43 241.1 16.4 207 3-224 47-261 (265)
234 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.6E-38 3.4E-43 242.9 17.1 214 2-225 47-266 (284)
235 PRK13184 pknD serine/threonine 100.0 1E-38 2.2E-43 268.5 17.3 216 2-227 46-288 (932)
236 cd05586 STKc_Sck1_like Catalyt 100.0 2.7E-39 5.9E-44 252.0 13.0 205 5-224 40-252 (330)
237 cd05109 PTKc_HER2 Catalytic do 100.0 3.2E-38 6.8E-43 240.6 18.4 210 3-227 54-266 (279)
238 cd06614 STKc_PAK Catalytic dom 100.0 2.9E-38 6.4E-43 241.6 18.3 211 2-224 59-269 (286)
239 cd05572 STKc_cGK_PKG Catalytic 100.0 2.3E-38 5.1E-43 239.2 17.4 208 3-224 38-251 (262)
240 cd06637 STKc_TNIK Catalytic do 100.0 3E-38 6.5E-43 239.8 18.1 211 2-224 46-268 (272)
241 cd06608 STKc_myosinIII_like Ca 100.0 2E-38 4.4E-43 240.9 17.0 212 3-224 47-271 (275)
242 cd08217 STKc_Nek2 Catalytic do 100.0 2.3E-38 5E-43 239.4 17.2 211 2-224 43-261 (265)
243 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.1E-38 6.8E-43 241.6 18.1 216 3-224 44-265 (287)
244 cd06623 PKc_MAPKK_plant_like C 100.0 4.2E-38 9E-43 237.9 18.5 212 2-224 43-255 (264)
245 cd05609 STKc_MAST Catalytic do 100.0 2.5E-38 5.3E-43 244.1 17.5 212 3-227 46-272 (305)
246 cd05632 STKc_GRK5 Catalytic do 100.0 2E-38 4.4E-43 242.4 16.8 210 4-224 46-260 (285)
247 cd05057 PTKc_EGFR_like Catalyt 100.0 6E-38 1.3E-42 239.1 19.3 210 3-227 54-266 (279)
248 cd07853 STKc_NLK Catalytic dom 100.0 4.4E-39 9.6E-44 254.6 13.1 215 3-224 44-287 (372)
249 PTZ00036 glycogen synthase kin 100.0 1.4E-38 3.1E-43 256.0 16.0 216 4-224 105-350 (440)
250 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3E-38 6.4E-43 241.1 17.0 210 3-224 57-278 (282)
251 KOG4278 Protein tyrosine kinas 100.0 2.3E-39 5E-44 255.6 11.1 213 2-227 307-521 (1157)
252 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.6E-38 1E-42 249.7 18.6 215 3-228 85-398 (401)
253 cd07874 STKc_JNK3 Catalytic do 100.0 1.8E-38 3.9E-43 249.7 16.0 212 3-224 61-310 (355)
254 cd08528 STKc_Nek10 Catalytic d 100.0 6.3E-38 1.4E-42 237.7 18.3 213 4-228 54-269 (269)
255 cd07860 STKc_CDK2_3 Catalytic 100.0 2E-38 4.3E-43 242.3 15.6 215 3-224 44-280 (284)
256 cd07863 STKc_CDK4 Catalytic do 100.0 3.1E-38 6.8E-43 241.7 16.6 215 4-224 45-284 (288)
257 cd05574 STKc_phototropin_like 100.0 4.6E-38 1E-42 243.8 17.7 210 3-224 46-288 (316)
258 cd07844 STKc_PCTAIRE_like Cata 100.0 2.7E-38 5.8E-43 242.4 16.2 213 4-224 49-287 (291)
259 cd06630 STKc_MEKK1 Catalytic d 100.0 3.1E-38 6.8E-43 239.2 16.4 211 3-224 48-263 (268)
260 cd07867 STKc_CDC2L6 Catalytic 100.0 8.7E-38 1.9E-42 242.3 19.0 159 4-166 44-218 (317)
261 cd05577 STKc_GRK Catalytic dom 100.0 3.8E-38 8.3E-43 239.9 16.5 211 3-224 38-253 (277)
262 KOG0574 STE20-like serine/thre 100.0 6.5E-40 1.4E-44 238.8 6.4 211 2-224 72-282 (502)
263 cd05580 STKc_PKA Catalytic dom 100.0 6.2E-38 1.3E-42 240.3 17.7 203 3-224 46-253 (290)
264 KOG0658 Glycogen synthase kina 100.0 1.7E-39 3.6E-44 241.5 8.7 214 6-224 65-305 (364)
265 KOG0607 MAP kinase-interacting 100.0 6.7E-39 1.4E-43 234.8 11.6 218 1-224 118-360 (463)
266 cd06917 STKc_NAK1_like Catalyt 100.0 9.9E-38 2.1E-42 237.6 18.5 207 3-224 44-254 (277)
267 cd08225 STKc_Nek5 Catalytic do 100.0 4.5E-38 9.7E-43 236.9 16.4 210 2-224 43-253 (257)
268 PTZ00266 NIMA-related protein 100.0 1.3E-38 2.8E-43 269.0 14.9 213 2-224 56-294 (1021)
269 cd07841 STKc_CDK7 Catalytic do 100.0 5E-38 1.1E-42 241.7 16.9 214 4-225 48-282 (298)
270 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2E-38 4.4E-43 248.4 14.9 211 3-224 59-297 (343)
271 cd08220 STKc_Nek8 Catalytic do 100.0 9.4E-38 2E-42 235.1 18.0 209 2-224 43-252 (256)
272 cd06657 STKc_PAK4 Catalytic do 100.0 5.4E-38 1.2E-42 240.7 17.0 208 3-224 62-269 (292)
273 cd08216 PK_STRAD Pseudokinase 100.0 8E-38 1.7E-42 242.2 17.8 213 3-224 44-294 (314)
274 cd07875 STKc_JNK1 Catalytic do 100.0 5.3E-38 1.1E-42 247.9 16.9 212 3-224 68-317 (364)
275 cd05597 STKc_DMPK_like Catalyt 100.0 6.7E-38 1.4E-42 244.2 17.1 211 3-224 46-265 (331)
276 PHA03209 serine/threonine kina 100.0 2E-38 4.4E-43 249.3 14.2 154 4-164 103-256 (357)
277 cd06638 STKc_myosinIIIA Cataly 100.0 1.2E-37 2.7E-42 238.1 18.1 213 3-225 59-283 (286)
278 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.3E-38 2.8E-43 243.5 12.5 216 3-224 45-282 (286)
279 cd06641 STKc_MST3 Catalytic do 100.0 2E-37 4.2E-42 236.1 18.9 206 3-224 47-252 (277)
280 cd06639 STKc_myosinIIIB Cataly 100.0 1.7E-37 3.7E-42 238.0 18.5 212 3-224 63-286 (291)
281 cd06647 STKc_PAK_I Catalytic d 100.0 9.4E-38 2E-42 239.6 16.9 208 3-224 61-268 (293)
282 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.5E-37 3.3E-42 236.0 17.9 210 3-224 53-268 (272)
283 cd06626 STKc_MEKK4 Catalytic d 100.0 1.7E-37 3.7E-42 234.7 17.8 210 3-224 44-260 (264)
284 cd07835 STKc_CDK1_like Catalyt 100.0 8.3E-38 1.8E-42 238.7 16.1 217 3-224 43-279 (283)
285 cd06632 STKc_MEKK1_plant Catal 100.0 1.9E-37 4.1E-42 233.6 17.8 206 3-224 47-254 (258)
286 cd07833 STKc_CDKL Catalytic do 100.0 4.7E-38 1E-42 240.6 14.6 217 2-224 44-284 (288)
287 cd08215 STKc_Nek Catalytic dom 100.0 2.3E-37 4.9E-42 233.0 17.9 211 2-224 43-254 (258)
288 PHA03210 serine/threonine kina 100.0 1E-37 2.2E-42 254.5 17.2 218 3-224 208-453 (501)
289 cd07832 STKc_CCRK Catalytic do 100.0 2.1E-37 4.5E-42 236.8 17.9 214 3-224 44-281 (286)
290 cd05122 PKc_STE Catalytic doma 100.0 2.4E-37 5.3E-42 232.0 17.6 210 2-224 41-250 (253)
291 cd05623 STKc_MRCK_alpha Cataly 100.0 1.4E-37 2.9E-42 242.6 16.5 210 4-224 47-265 (332)
292 cd05579 STKc_MAST_like Catalyt 100.0 9.4E-38 2E-42 236.0 15.2 210 3-226 38-255 (265)
293 cd07836 STKc_Pho85 Catalytic d 100.0 2.1E-37 4.6E-42 236.6 17.1 218 3-224 43-280 (284)
294 cd07843 STKc_CDC2L1 Catalytic 100.0 2.6E-37 5.6E-42 237.2 17.6 215 4-224 50-289 (293)
295 cd05110 PTKc_HER4 Catalytic do 100.0 2.2E-37 4.9E-42 238.6 17.1 209 4-227 55-266 (303)
296 KOG0577 Serine/threonine prote 100.0 6.2E-39 1.3E-43 251.6 8.4 204 3-224 71-277 (948)
297 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3.3E-37 7.1E-42 236.4 17.7 210 4-224 49-287 (291)
298 cd05624 STKc_MRCK_beta Catalyt 100.0 1.3E-37 2.8E-42 242.6 15.5 210 4-224 47-265 (331)
299 KOG0196 Tyrosine kinase, EPH ( 100.0 2.4E-39 5.3E-44 260.2 5.9 213 2-228 674-890 (996)
300 cd05611 STKc_Rim15_like Cataly 100.0 2.4E-37 5.2E-42 233.5 16.4 206 5-226 43-249 (260)
301 cd06651 STKc_MEKK3 Catalytic d 100.0 4.9E-37 1.1E-41 232.5 18.2 206 3-224 49-260 (266)
302 cd05103 PTKc_VEGFR2 Catalytic 100.0 4.2E-37 9.2E-42 240.8 18.1 214 3-227 55-337 (343)
303 KOG4279 Serine/threonine prote 100.0 2.7E-38 5.9E-43 252.1 11.1 211 4-224 618-831 (1226)
304 cd05578 STKc_Yank1 Catalytic d 100.0 7E-38 1.5E-42 236.1 12.9 208 3-224 45-254 (258)
305 KOG0667 Dual-specificity tyros 100.0 1E-37 2.2E-42 247.2 14.0 155 5-167 229-391 (586)
306 cd06652 STKc_MEKK2 Catalytic d 100.0 8.9E-37 1.9E-41 231.0 18.6 206 3-224 49-260 (265)
307 cd08530 STKc_CNK2-like Catalyt 100.0 3E-37 6.6E-42 232.2 15.7 209 2-224 43-252 (256)
308 cd06627 STKc_Cdc7_like Catalyt 100.0 8.3E-37 1.8E-41 229.5 17.8 207 3-224 44-250 (254)
309 cd07845 STKc_CDK10 Catalytic d 100.0 2.5E-37 5.4E-42 239.0 15.3 212 4-224 52-289 (309)
310 cd05074 PTKc_Tyro3 Catalytic d 100.0 8.8E-37 1.9E-41 231.9 18.1 214 3-228 46-271 (273)
311 cd06607 STKc_TAO Catalytic dom 100.0 1.2E-36 2.6E-41 235.0 18.9 204 3-224 60-266 (307)
312 cd08226 PK_STRAD_beta Pseudoki 100.0 1.2E-36 2.6E-41 237.0 19.0 212 3-224 44-307 (328)
313 cd06606 STKc_MAPKKK Catalytic 100.0 1.2E-36 2.5E-41 229.2 18.2 209 2-224 43-256 (260)
314 cd05118 STKc_CMGC Catalytic do 100.0 3.9E-37 8.5E-42 234.9 15.7 216 3-224 43-279 (283)
315 cd07837 STKc_CdkB_plant Cataly 100.0 4.3E-37 9.2E-42 236.2 15.9 218 3-224 45-290 (295)
316 PLN00009 cyclin-dependent kina 100.0 8.5E-37 1.8E-41 234.4 17.4 217 3-224 46-283 (294)
317 KOG4645 MAPKKK (MAP kinase kin 100.0 6.9E-39 1.5E-43 269.1 5.2 208 4-225 1280-1494(1509)
318 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.3E-37 1.2E-41 239.8 15.0 216 3-225 49-291 (337)
319 cd06635 STKc_TAO1 Catalytic do 100.0 3.8E-36 8.1E-41 233.1 19.4 205 3-225 70-277 (317)
320 cd07834 STKc_MAPK Catalytic do 100.0 5.2E-37 1.1E-41 239.3 14.7 215 3-224 44-288 (330)
321 KOG0603 Ribosomal protein S6 k 100.0 2.5E-37 5.4E-42 244.2 12.8 199 5-224 362-562 (612)
322 cd06616 PKc_MKK4 Catalytic dom 100.0 9.6E-37 2.1E-41 233.5 15.7 214 2-224 46-266 (288)
323 cd05633 STKc_GRK3 Catalytic do 100.0 1.1E-36 2.4E-41 232.1 15.9 205 5-224 41-254 (279)
324 cd06634 STKc_TAO2 Catalytic do 100.0 3E-36 6.5E-41 232.8 18.3 205 3-225 60-267 (308)
325 KOG1094 Discoidin domain recep 100.0 8.9E-38 1.9E-42 244.4 9.7 219 2-227 579-802 (807)
326 cd08222 STKc_Nek11 Catalytic d 100.0 1.2E-36 2.5E-41 229.7 15.4 208 4-224 48-256 (260)
327 PTZ00024 cyclin-dependent prot 100.0 1.6E-36 3.5E-41 236.9 16.4 212 4-224 66-312 (335)
328 cd07850 STKc_JNK Catalytic dom 100.0 2.4E-36 5.2E-41 237.5 17.3 212 3-224 60-310 (353)
329 PHA03390 pk1 serine/threonine- 100.0 2.2E-36 4.7E-41 229.1 16.3 193 16-224 67-261 (267)
330 cd07842 STKc_CDK8_like Catalyt 100.0 3.6E-36 7.9E-41 233.1 17.9 218 3-224 47-312 (316)
331 cd05583 STKc_MSK_N N-terminal 100.0 1.6E-36 3.4E-41 232.3 15.4 213 3-227 49-265 (288)
332 cd07831 STKc_MOK Catalytic dom 100.0 1.8E-36 3.8E-41 231.3 15.6 212 5-224 44-278 (282)
333 cd06633 STKc_TAO3 Catalytic do 100.0 7.2E-36 1.6E-40 231.1 19.1 204 3-224 66-272 (313)
334 cd05123 STKc_AGC Catalytic dom 100.0 3E-36 6.6E-41 226.1 16.5 205 3-223 38-245 (250)
335 KOG0983 Mitogen-activated prot 100.0 1.5E-37 3.3E-42 223.3 8.7 210 3-224 135-348 (391)
336 cd07852 STKc_MAPK15 Catalytic 100.0 2.1E-36 4.6E-41 236.4 15.8 214 3-224 51-294 (337)
337 cd07855 STKc_ERK5 Catalytic do 100.0 1.1E-36 2.3E-41 237.8 14.1 215 3-224 49-293 (334)
338 cd06653 STKc_MEKK3_like_1 Cata 100.0 1E-35 2.2E-40 225.1 18.8 206 3-224 49-260 (264)
339 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.7E-36 1E-40 229.1 16.4 210 4-224 45-260 (283)
340 PTZ00284 protein kinase; Provi 100.0 4.1E-36 8.9E-41 243.9 17.0 211 4-224 171-437 (467)
341 KOG0586 Serine/threonine prote 100.0 9.4E-37 2E-41 239.9 12.3 206 2-224 99-305 (596)
342 cd07840 STKc_CDK9_like Catalyt 100.0 5.6E-36 1.2E-40 228.9 16.3 216 3-224 43-283 (287)
343 cd07829 STKc_CDK_like Catalyti 100.0 2.9E-36 6.4E-41 230.0 14.4 216 3-224 43-278 (282)
344 cd07865 STKc_CDK9 Catalytic do 100.0 4.4E-36 9.5E-41 232.0 15.5 212 4-224 57-306 (310)
345 cd07849 STKc_ERK1_2_like Catal 100.0 2.4E-36 5.1E-41 236.1 14.1 215 3-225 48-292 (336)
346 KOG0199 ACK and related non-re 100.0 5.8E-37 1.3E-41 244.3 10.7 210 2-225 155-368 (1039)
347 cd05606 STKc_beta_ARK Catalyti 100.0 1.4E-35 3E-40 225.9 17.8 199 11-224 50-254 (278)
348 PHA02882 putative serine/threo 100.0 7.9E-36 1.7E-40 229.0 16.4 208 8-227 73-294 (294)
349 PLN00113 leucine-rich repeat r 100.0 1.2E-35 2.7E-40 260.0 19.5 211 6-228 731-950 (968)
350 KOG0690 Serine/threonine prote 100.0 7.1E-37 1.5E-41 225.0 9.7 197 6-218 216-412 (516)
351 cd07838 STKc_CDK4_6_like Catal 100.0 1.2E-35 2.5E-40 227.2 16.8 209 4-224 44-283 (287)
352 KOG0200 Fibroblast/platelet-de 100.0 9.6E-36 2.1E-40 246.7 17.1 216 1-227 344-577 (609)
353 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.5E-35 3.2E-40 230.7 17.0 211 3-224 54-287 (328)
354 cd06618 PKc_MKK7 Catalytic dom 100.0 1.4E-35 3.1E-40 227.8 16.6 209 3-224 58-272 (296)
355 KOG0986 G protein-coupled rece 100.0 4.7E-36 1E-40 228.6 12.7 204 5-219 232-435 (591)
356 cd05581 STKc_PDK1 Catalytic do 100.0 9E-36 1.9E-40 227.0 14.4 206 3-224 46-276 (280)
357 cd07864 STKc_CDK12 Catalytic d 100.0 1.8E-35 3.9E-40 227.8 16.0 213 3-224 51-298 (302)
358 cd05613 STKc_MSK1_N N-terminal 100.0 1.9E-35 4.2E-40 226.5 16.1 210 3-224 49-267 (290)
359 cd07857 STKc_MPK1 Catalytic do 100.0 4.5E-35 9.8E-40 228.5 16.6 215 3-224 46-291 (332)
360 cd05576 STKc_RPK118_like Catal 100.0 1.6E-35 3.5E-40 220.6 13.4 192 5-219 32-223 (237)
361 cd07866 STKc_BUR1 Catalytic do 100.0 1.2E-35 2.7E-40 229.6 12.9 215 4-224 53-307 (311)
362 cd07851 STKc_p38 Catalytic dom 100.0 1.3E-35 2.7E-40 232.5 13.0 211 3-224 59-297 (343)
363 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.4E-35 9.5E-40 229.4 15.9 211 3-224 59-297 (343)
364 cd07830 STKc_MAK_like Catalyti 100.0 1.2E-34 2.6E-39 221.3 17.2 215 4-224 43-279 (283)
365 smart00220 S_TKc Serine/Threon 100.0 1.2E-34 2.5E-39 216.1 15.8 210 2-224 31-240 (244)
366 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.1E-34 2.3E-39 227.4 16.1 211 3-224 61-299 (345)
367 cd07879 STKc_p38delta_MAPK13 C 100.0 1E-34 2.2E-39 227.4 15.1 210 3-224 59-296 (342)
368 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.3E-35 9.4E-40 229.4 12.5 214 3-224 47-299 (342)
369 KOG4250 TANK binding protein k 100.0 9.5E-35 2.1E-39 231.9 13.7 162 1-166 54-226 (732)
370 KOG0666 Cyclin C-dependent kin 100.0 2.3E-34 5.1E-39 210.3 12.0 217 4-224 73-336 (438)
371 KOG0671 LAMMER dual specificit 100.0 1.2E-34 2.5E-39 216.6 10.5 212 2-224 129-405 (415)
372 KOG0614 cGMP-dependent protein 100.0 1.6E-35 3.5E-40 228.7 6.0 201 3-218 465-665 (732)
373 KOG1027 Serine/threonine prote 100.0 1.4E-34 3E-39 234.3 9.7 208 4-224 548-766 (903)
374 KOG0587 Traf2- and Nck-interac 100.0 1.6E-33 3.5E-38 229.2 15.4 211 3-224 60-281 (953)
375 cd05610 STKc_MASTL Catalytic d 100.0 1.3E-32 2.8E-37 231.1 18.4 104 3-112 49-152 (669)
376 KOG1006 Mitogen-activated prot 100.0 2.4E-35 5.1E-40 211.1 1.0 215 2-225 106-327 (361)
377 KOG0669 Cyclin T-dependent kin 100.0 2.2E-33 4.7E-38 200.0 10.0 214 5-224 63-314 (376)
378 KOG0665 Jun-N-terminal kinase 100.0 9.9E-34 2.1E-38 207.3 8.3 212 3-224 60-309 (369)
379 KOG1151 Tousled-like protein k 100.0 6.1E-33 1.3E-37 212.0 12.8 212 4-223 513-739 (775)
380 KOG0696 Serine/threonine prote 100.0 4.5E-33 9.9E-38 210.8 11.0 196 7-218 398-594 (683)
381 KOG1024 Receptor-like protein 100.0 1.5E-32 3.3E-37 206.4 13.0 212 4-227 333-553 (563)
382 KOG1025 Epidermal growth facto 100.0 1.2E-33 2.6E-38 228.8 7.4 211 3-228 743-956 (1177)
383 KOG2052 Activin A type IB rece 100.0 2.8E-32 6E-37 207.5 13.9 220 1-227 246-501 (513)
384 KOG4236 Serine/threonine prote 100.0 2.2E-33 4.7E-38 218.2 7.0 207 3-223 608-817 (888)
385 KOG0695 Serine/threonine prote 100.0 3.1E-32 6.6E-37 201.7 12.6 205 4-218 296-503 (593)
386 KOG0612 Rho-associated, coiled 100.0 3.1E-32 6.7E-37 226.8 10.9 206 4-223 121-336 (1317)
387 KOG0662 Cyclin-dependent kinas 100.0 1.1E-31 2.4E-36 182.5 11.5 216 3-224 46-282 (292)
388 KOG1035 eIF-2alpha kinase GCN2 100.0 5.3E-32 1.1E-36 226.8 12.1 179 33-224 671-870 (1351)
389 PLN00181 protein SPA1-RELATED; 100.0 2.1E-32 4.6E-37 234.5 9.4 197 11-224 25-264 (793)
390 cd00180 PKc Catalytic domain o 100.0 1E-30 2.2E-35 190.7 16.5 179 2-226 35-215 (215)
391 KOG0608 Warts/lats-like serine 100.0 6.5E-31 1.4E-35 208.2 14.0 193 5-209 676-910 (1034)
392 KOG0984 Mitogen-activated prot 100.0 1.1E-31 2.5E-36 185.8 8.5 161 2-166 88-254 (282)
393 KOG3653 Transforming growth fa 100.0 3.5E-31 7.7E-36 202.8 11.8 222 1-227 245-501 (534)
394 smart00750 KIND kinase non-cat 100.0 1.3E-30 2.7E-35 185.7 13.8 164 43-226 1-166 (176)
395 KOG0668 Casein kinase II, alph 100.0 6.7E-31 1.4E-35 184.8 11.1 213 2-224 76-321 (338)
396 KOG0670 U4/U6-associated splic 100.0 2.4E-31 5.1E-36 206.3 7.4 211 6-224 476-745 (752)
397 KOG1152 Signal transduction se 100.0 3.4E-31 7.4E-36 207.5 6.8 151 6-164 614-769 (772)
398 PLN03225 Serine/threonine-prot 100.0 3E-30 6.5E-35 212.3 12.5 194 28-224 205-449 (566)
399 PLN03224 probable serine/threo 100.0 5.7E-29 1.2E-33 200.5 16.3 215 6-224 220-499 (507)
400 KOG0664 Nemo-like MAPK-related 100.0 7.4E-31 1.6E-35 189.3 2.5 216 2-224 96-342 (449)
401 KOG1290 Serine/threonine prote 100.0 2E-28 4.4E-33 188.5 14.8 91 3-97 119-221 (590)
402 KOG0576 Mitogen-activated prot 100.0 7E-30 1.5E-34 202.9 6.1 210 3-224 57-270 (829)
403 KOG1345 Serine/threonine kinas 100.0 4.2E-29 9.1E-34 179.7 7.4 202 3-216 65-275 (378)
404 smart00221 STYKc Protein kinas 99.9 6.5E-27 1.4E-31 172.6 13.7 159 2-165 41-201 (225)
405 KOG1167 Serine/threonine prote 99.9 1.5E-26 3.2E-31 175.3 10.2 154 3-165 79-279 (418)
406 KOG0590 Checkpoint kinase and 99.9 3.2E-27 6.9E-32 194.2 6.0 212 5-224 368-584 (601)
407 KOG1164 Casein kinase (serine/ 99.9 2E-23 4.3E-28 161.9 15.8 214 4-227 62-295 (322)
408 KOG1165 Casein kinase (serine/ 99.9 4E-23 8.7E-28 153.0 13.7 216 3-226 68-296 (449)
409 KOG1023 Natriuretic peptide re 99.9 2.1E-23 4.5E-28 165.1 12.8 208 12-227 1-222 (484)
410 KOG0195 Integrin-linked kinase 99.9 4.5E-24 9.7E-29 154.4 8.0 209 4-228 233-445 (448)
411 COG0515 SPS1 Serine/threonine 99.9 7.8E-22 1.7E-26 153.4 18.0 218 2-224 41-274 (384)
412 KOG1163 Casein kinase (serine/ 99.9 4E-23 8.6E-28 146.8 9.5 214 4-226 56-281 (341)
413 KOG4158 BRPK/PTEN-induced prot 99.9 1.1E-21 2.3E-26 148.9 12.3 194 16-225 274-510 (598)
414 KOG1240 Protein kinase contain 99.9 1.1E-22 2.3E-27 170.4 5.8 197 7-225 71-291 (1431)
415 KOG1033 eIF-2alpha kinase PEK/ 99.9 5.9E-23 1.3E-27 160.3 3.6 172 32-221 330-508 (516)
416 PF14531 Kinase-like: Kinase-l 99.9 3.5E-22 7.6E-27 149.2 6.0 162 34-216 115-288 (288)
417 KOG0603 Ribosomal protein S6 k 99.8 9.2E-22 2E-26 156.5 6.2 188 6-219 44-232 (612)
418 PRK09188 serine/threonine prot 99.8 1.4E-20 3E-25 146.3 10.7 122 2-139 65-195 (365)
419 PRK12274 serine/threonine prot 99.8 3.1E-20 6.7E-25 132.3 11.3 146 4-166 47-209 (218)
420 PRK10359 lipopolysaccharide co 99.8 1.8E-20 3.9E-25 136.1 7.1 128 4-158 81-216 (232)
421 cd05147 RIO1_euk RIO kinase fa 99.8 2.4E-18 5.1E-23 123.4 9.8 101 6-115 67-168 (190)
422 KOG0606 Microtubule-associated 99.7 1.1E-18 2.4E-23 146.2 5.2 139 70-218 152-305 (1205)
423 cd05145 RIO1_like RIO kinase f 99.7 2E-17 4.4E-22 118.9 10.9 101 5-115 66-168 (190)
424 PRK10345 hypothetical protein; 99.7 2.3E-17 5.1E-22 119.4 10.4 101 2-111 40-156 (210)
425 KOG1166 Mitotic checkpoint ser 99.7 9.7E-18 2.1E-22 142.1 9.5 197 10-227 743-951 (974)
426 KOG1243 Protein kinase [Genera 99.7 2.3E-16 4.9E-21 127.2 12.8 147 4-162 55-201 (690)
427 KOG1266 Protein kinase [Signal 99.7 1.6E-17 3.4E-22 123.6 5.4 198 12-223 121-329 (458)
428 KOG0590 Checkpoint kinase and 99.7 3.5E-18 7.5E-23 141.2 0.8 207 7-223 69-284 (601)
429 PRK14879 serine/threonine prot 99.7 4.5E-16 9.8E-21 113.9 10.1 100 3-113 44-143 (211)
430 TIGR03724 arch_bud32 Kae1-asso 99.6 1.1E-15 2.3E-20 110.9 9.3 97 3-113 42-138 (199)
431 PRK09605 bifunctional UGMP fam 99.6 1E-15 2.3E-20 126.5 10.4 96 3-113 381-476 (535)
432 PRK01723 3-deoxy-D-manno-octul 99.6 1.8E-15 3.8E-20 112.3 10.2 100 3-113 85-191 (239)
433 smart00090 RIO RIO-like kinase 99.6 1.6E-15 3.4E-20 112.4 9.6 101 4-115 96-199 (237)
434 cd05144 RIO2_C RIO kinase fami 99.5 2.9E-14 6.3E-19 103.3 9.0 96 4-115 79-176 (198)
435 cd05120 APH_ChoK_like Aminogly 99.5 1.2E-13 2.6E-18 95.5 9.6 101 3-113 36-138 (155)
436 COG4248 Uncharacterized protei 99.5 1.6E-12 3.5E-17 100.5 15.0 193 31-227 83-298 (637)
437 KOG0601 Cyclin-dependent kinas 99.5 1.1E-13 2.3E-18 110.7 8.0 203 6-224 165-378 (524)
438 COG3642 Mn2+-dependent serine/ 99.4 2.6E-12 5.6E-17 89.0 9.1 98 2-113 43-140 (204)
439 cd05146 RIO3_euk RIO kinase fa 99.4 9.2E-12 2E-16 88.8 10.4 99 5-115 73-175 (197)
440 cd05119 RIO RIO kinase family, 99.3 7.2E-12 1.6E-16 89.9 8.7 97 6-115 65-165 (187)
441 KOG2137 Protein kinase [Signal 99.3 1.4E-12 3.1E-17 106.0 2.6 150 67-224 105-264 (700)
442 KOG3087 Serine/threonine prote 99.2 9.4E-11 2E-15 81.2 9.7 109 2-114 54-166 (229)
443 PRK15123 lipopolysaccharide co 99.2 7.5E-11 1.6E-15 88.7 10.2 106 4-113 74-194 (268)
444 cd05151 ChoK Choline Kinase (C 99.2 3.4E-11 7.4E-16 85.0 7.4 96 4-113 38-136 (170)
445 KOG0606 Microtubule-associated 99.2 4.6E-12 1E-16 107.3 3.2 191 17-220 863-1084(1205)
446 PF01163 RIO1: RIO1 family; I 99.2 1.4E-10 3.1E-15 82.4 8.9 101 2-115 52-157 (188)
447 TIGR01982 UbiB 2-polyprenylphe 99.2 7.4E-11 1.6E-15 95.0 8.3 104 4-115 199-308 (437)
448 PF06293 Kdo: Lipopolysacchari 99.2 4.6E-10 9.9E-15 81.7 10.7 107 2-114 55-171 (206)
449 KOG0601 Cyclin-dependent kinas 99.1 6.2E-11 1.4E-15 95.1 4.0 198 6-225 313-514 (524)
450 PRK04750 ubiB putative ubiquin 99.1 8E-10 1.7E-14 90.5 9.8 101 5-115 203-315 (537)
451 COG0478 RIO-like serine/threon 99.0 1.4E-09 3E-14 80.1 7.6 99 2-115 153-253 (304)
452 PRK09902 hypothetical protein; 99.0 5E-09 1.1E-13 75.2 9.4 107 2-113 63-179 (216)
453 KOG3741 Poly(A) ribonuclease s 99.0 3E-08 6.5E-13 79.1 14.0 181 8-225 323-521 (655)
454 cd05154 ACAD10_11_like Acyl-Co 98.9 1.3E-08 2.9E-13 74.8 10.0 107 3-113 40-206 (223)
455 PF06176 WaaY: Lipopolysacchar 98.7 6.8E-08 1.5E-12 69.7 8.0 67 31-112 116-182 (229)
456 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 2.2E-06 4.7E-11 63.3 10.6 110 3-113 37-182 (226)
457 PF12260 PIP49_C: Protein-kina 98.5 1.3E-06 2.9E-11 62.4 9.2 105 6-114 7-112 (188)
458 KOG1035 eIF-2alpha kinase GCN2 98.5 8.7E-07 1.9E-11 77.2 8.7 194 6-225 230-434 (1351)
459 cd05150 APH Aminoglycoside 3'- 98.3 7.9E-06 1.7E-10 61.2 9.9 109 4-112 37-192 (244)
460 COG1718 RIO1 Serine/threonine 98.3 6.3E-06 1.4E-10 60.5 8.8 100 6-115 116-217 (268)
461 KOG0576 Mitogen-activated prot 98.3 4.6E-07 9.9E-12 74.3 2.8 148 6-164 281-430 (829)
462 cd05155 APH_ChoK_like_1 Unchar 98.1 2.7E-05 6E-10 57.9 9.2 31 83-113 164-194 (235)
463 COG0661 AarF Predicted unusual 98.1 2.3E-05 5E-10 64.3 8.1 105 4-116 207-317 (517)
464 PF10707 YrbL-PhoP_reg: PhoP r 98.0 0.00013 2.9E-09 52.5 10.4 98 3-111 56-170 (199)
465 PLN02876 acyl-CoA dehydrogenas 97.9 0.00014 3.1E-09 63.8 11.6 113 3-115 83-259 (822)
466 PF01636 APH: Phosphotransfera 97.8 0.00029 6.4E-09 52.0 10.0 45 3-47 35-84 (239)
467 TIGR02721 ycfN_thiK thiamine k 97.8 0.00016 3.4E-09 54.6 8.2 29 84-113 147-175 (256)
468 KOG1235 Predicted unusual prot 97.7 0.00019 4.2E-09 59.0 8.4 86 20-115 266-356 (538)
469 KOG2268 Serine/threonine prote 97.7 7.6E-05 1.7E-09 57.2 5.2 98 2-115 154-253 (465)
470 KOG1826 Ras GTPase activating 97.6 6.6E-06 1.4E-10 74.1 -2.1 158 8-165 1279-1441(2724)
471 PF01633 Choline_kinase: Choli 97.5 0.00026 5.6E-09 51.8 5.1 30 84-113 144-174 (211)
472 COG3173 Predicted aminoglycosi 97.4 0.0015 3.2E-08 50.6 8.7 32 84-115 199-230 (321)
473 COG2112 Predicted Ser/Thr prot 97.3 0.0011 2.3E-08 46.5 6.7 96 2-114 59-156 (201)
474 PRK10593 hypothetical protein; 97.3 0.0037 8E-08 48.3 10.1 43 3-45 52-100 (297)
475 cd05153 HomoserineK_II Homoser 97.2 0.0029 6.3E-08 48.8 8.7 31 83-113 175-205 (296)
476 PLN02236 choline kinase 97.1 0.0032 6.9E-08 49.7 7.7 30 84-113 201-231 (344)
477 KOG1093 Predicted protein kina 97.0 0.0016 3.5E-08 53.2 5.2 160 3-223 27-192 (725)
478 PLN02421 phosphotransferase, a 96.9 0.0039 8.5E-08 48.9 6.6 30 84-113 183-213 (330)
479 PTZ00384 choline kinase; Provi 96.7 0.009 1.9E-07 47.8 7.7 29 84-113 228-256 (383)
480 KOG2270 Serine/threonine prote 96.6 0.013 2.7E-07 46.3 7.6 103 5-115 213-315 (520)
481 COG5072 ALK1 Serine/threonine 96.5 0.019 4.1E-07 45.2 7.6 75 30-115 298-372 (488)
482 cd05157 ETNK_euk Ethanolamine 96.5 0.0058 1.3E-07 45.4 4.8 30 84-113 171-201 (235)
483 cd05156 ChoK_euk Choline Kinas 96.3 0.013 2.9E-07 45.3 6.1 32 82-113 178-213 (302)
484 PF03881 Fructosamin_kin: Fruc 96.3 0.032 6.9E-07 42.9 8.0 41 3-43 54-97 (288)
485 TIGR00938 thrB_alt homoserine 96.2 0.0098 2.1E-07 46.2 5.0 31 83-113 187-217 (307)
486 PRK05231 homoserine kinase; Pr 96.1 0.0048 1E-07 48.1 2.8 32 82-113 186-217 (319)
487 COG0510 ycfN Thiamine kinase a 96.0 0.016 3.4E-07 44.1 5.2 47 66-113 137-183 (269)
488 TIGR02906 spore_CotS spore coa 96.0 0.02 4.4E-07 44.4 5.9 28 84-112 188-215 (313)
489 PRK10271 thiK thiamine kinase; 95.8 0.0081 1.8E-07 42.8 2.7 29 84-113 78-106 (188)
490 KOG4720 Ethanolamine kinase [L 95.8 0.033 7.1E-07 42.5 5.8 29 85-113 250-279 (391)
491 COG3001 Uncharacterized protei 95.7 0.11 2.3E-06 38.5 7.9 44 3-46 53-99 (286)
492 COG2334 Putative homoserine ki 95.3 0.055 1.2E-06 42.4 5.9 28 85-112 199-227 (331)
493 TIGR02904 spore_ysxE spore coa 95.2 0.044 9.5E-07 42.6 5.0 31 83-113 196-226 (309)
494 PF07914 DUF1679: Protein of u 95.1 0.036 7.8E-07 44.9 4.6 30 85-114 270-304 (414)
495 PF07387 Seadorna_VP7: Seadorn 95.0 0.029 6.3E-07 41.2 3.2 38 71-109 151-188 (308)
496 smart00587 CHK ZnF_C4 abd HLH 94.8 0.031 6.7E-07 40.4 3.1 30 84-113 121-155 (196)
497 PLN02756 S-methyl-5-thioribose 94.4 0.21 4.6E-06 40.3 7.1 28 84-112 231-258 (418)
498 cd05152 MPH2' Macrolide 2'-Pho 94.2 0.049 1.1E-06 41.6 3.1 30 84-113 186-216 (276)
499 PRK06148 hypothetical protein; 93.8 0.18 3.8E-06 45.9 6.2 31 83-113 203-236 (1013)
500 PF13095 FTA2: Kinetochore Sim 93.6 0.67 1.5E-05 33.6 7.7 84 4-111 100-206 (207)
No 1
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-51 Score=306.67 Aligned_cols=212 Identities=27% Similarity=0.431 Sum_probs=187.8
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCe-EEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARH-SFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH- 79 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~- 79 (228)
++++.+|+++++.++||+||++++.|+.+.. .+|+||||++|+|++++...+ .+++.....++.++++||.|||.
T Consensus 121 ~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~~ 197 (364)
T KOG0581|consen 121 QKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHEE 197 (364)
T ss_pred HHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhc
Confidence 6789999999999999999999999999884 999999999999999997653 38999999999999999999996
Q ss_pred CCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 80 DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 80 ~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
. +|+||||||+|+|++..|.+||+|||.+...... ...++.||..|||||-+.+..|+.++||||||+.++|+.+
T Consensus 198 ~---~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~ 272 (364)
T KOG0581|consen 198 R---KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAI 272 (364)
T ss_pred c---CeeeccCCHHHeeeccCCCEEeccccccHHhhhh--hcccccccccccChhhhcCCcCCcccceecccHHHHHHhh
Confidence 7 9999999999999999999999999999876544 4466899999999999999999999999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|+.||... ........+....+.....|..+.. .+++++..+|..||++||.+|||++++++
T Consensus 273 GrfP~~~~-~~~~~~~~~Ll~~Iv~~ppP~lP~~--~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 273 GRFPYPPP-NPPYLDIFELLCAIVDEPPPRLPEG--EFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCCCCCCc-CCCCCCHHHHHHHHhcCCCCCCCcc--cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 99998754 2223456667777777666665544 58889999999999999999999999875
No 2
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.2e-52 Score=310.70 Aligned_cols=209 Identities=27% Similarity=0.404 Sum_probs=184.7
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+.+|+++|++|+|||||+++++|+.....|+||||+.||.|.+.+-.+.. +.+..-..+++|++.|+.|||++
T Consensus 222 ~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~---l~ed~~K~~f~Qll~avkYLH~~--- 295 (475)
T KOG0615|consen 222 DVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKY---LREDLGKLLFKQLLTAVKYLHSQ--- 295 (475)
T ss_pred hhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccc---cccchhHHHHHHHHHHHHHHHHc---
Confidence 357999999999999999999999999999999999999999999876654 66777788999999999999999
Q ss_pred CeeecCCCCCceEEcCC---CceEEeecccccccCCCCCCceecccccceeCCcccccCCc---ccchhhhhHHHHHHHH
Q 040501 84 PIVHRDISSKNVLLDLE---YEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKV---TAKCDVYSFGVLALEV 157 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~---~~~~DiwslG~~l~~~ 157 (228)
||+||||||+|||++.+ -.+||+|||+++..+ ......+.+|||.|.|||++.+... ..+.|+|||||++|-+
T Consensus 296 GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvc 374 (475)
T KOG0615|consen 296 GIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVC 374 (475)
T ss_pred CcccccCCcceEEeccCCcceEEEecccchhhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEE
Confidence 99999999999999877 678999999999877 4455677899999999999987754 3478999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++|.+||... ........++..++....+..+...+++..+||.+||..||++|||++|+++
T Consensus 375 LsG~pPFS~~-----~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 375 LSGYPPFSEE-----YTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred eccCCCcccc-----cCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 9999997522 1222367788889998888889999999999999999999999999999875
No 3
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-50 Score=290.50 Aligned_cols=215 Identities=23% Similarity=0.372 Sum_probs=182.8
Q ss_pred hHHHHHHHHHHhccCCCccceeee-eeeec-CeEEEEEEeecCCChhhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYG-FCTHA-RHSFLVYEYLENGSLSVILNN-DTSAEELGWSRRINVIKGIAHALSYLH 78 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~-~~~~~-~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~lh 78 (228)
|++...|+.+|++|+|||||++++ .|.++ ..++||||+|++|+|...++. ....+.+++..+|+++.|++.||.+||
T Consensus 62 rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH 141 (375)
T KOG0591|consen 62 RQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCH 141 (375)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHh
Confidence 677889999999999999999998 45444 458999999999999999976 233445999999999999999999999
Q ss_pred hCCCC-CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHH
Q 040501 79 HDCIP-PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 79 ~~~~~-~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~ 157 (228)
+..+. -+.||||||.|||++.+|.+||+|||+++..........+..|||.||+||.+.+.+|+.+|||||+||++|||
T Consensus 142 ~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEM 221 (375)
T KOG0591|consen 142 SKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEM 221 (375)
T ss_pred ccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHH
Confidence 93221 38999999999999999999999999999887666666778999999999999999999999999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+..++||... +....-..+.....++.+.. -++..+.++|..|+..||..||+.-.++.
T Consensus 222 caL~~PF~g~------n~~~L~~KI~qgd~~~~p~~--~YS~~l~~li~~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 222 CALQSPFYGD------NLLSLCKKIEQGDYPPLPDE--HYSTDLRELINMCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred HhcCCCcccc------cHHHHHHHHHcCCCCCCcHH--HhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence 9999998643 45556667777766655543 57778999999999999999998544433
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6e-49 Score=308.04 Aligned_cols=207 Identities=24% Similarity=0.421 Sum_probs=181.4
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
|+.+.+||++-++|+|||||+++++|++.+.+|||.|.|..++|..++++. +.+++..+..+++||+.|+.|||+.
T Consensus 62 reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krr---k~ltEpEary~l~QIv~GlkYLH~~- 137 (592)
T KOG0575|consen 62 REKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRR---KPLTEPEARYFLRQIVEGLKYLHSL- 137 (592)
T ss_pred HHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHHhc-
Confidence 577899999999999999999999999999999999999999999998743 4499999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
+|+|||||..|+|++++.++||+|||+|..+..+.....+.+|||-|.|||++.....+..+||||+||+||.++.|+
T Consensus 138 --~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~ 215 (592)
T KOG0575|consen 138 --GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGR 215 (592)
T ss_pred --CceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCC
Confidence 999999999999999999999999999999988877788899999999999999999999999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+||+... ..+....+........ ...+.+..+||.++|++||.+|||+++|+.
T Consensus 216 PPFetk~------vkety~~Ik~~~Y~~P----~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 216 PPFETKT------VKETYNKIKLNEYSMP----SHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred CCcccch------HHHHHHHHHhcCcccc----cccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 9986432 2233333322222111 134456789999999999999999999984
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-48 Score=297.89 Aligned_cols=213 Identities=33% Similarity=0.568 Sum_probs=180.6
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecC-eEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHAR-HSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
+++|.+|+.+|.+++|||||++++.+.... ..++||||+++|+|.+++... ....++...++.++.|++.|+.|||+.
T Consensus 83 ~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~ 161 (362)
T KOG0192|consen 83 RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE 161 (362)
T ss_pred HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 458999999999999999999999999887 799999999999999999874 334599999999999999999999999
Q ss_pred CCCC-eeecCCCCCceEEcCCC-ceEEeecccccccCCCCCCceecccccceeCCcccc--cCCcccchhhhhHHHHHHH
Q 040501 81 CIPP-IVHRDISSKNVLLDLEY-EAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAY--TMKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 81 ~~~~-i~h~di~p~nil~~~~~-~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~DiwslG~~l~~ 156 (228)
+ |+||||||+|||++.++ ++||+|||+++.........+...||+.|||||++. ...++.++||||+|+++||
T Consensus 162 ---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWE 238 (362)
T KOG0192|consen 162 ---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWE 238 (362)
T ss_pred ---CCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHH
Confidence 8 99999999999999997 999999999987664433444468999999999999 5689999999999999999
Q ss_pred HHhCCCCccccccccCCCchhhhhhhc-CCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 157 VIKGKHPRDFLSNVSSSNPNILVNEML-DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
+++|..||..... ......+. ....+..+. .++..+..++..||..||..||++.+++..|+
T Consensus 239 l~t~~~Pf~~~~~------~~~~~~v~~~~~Rp~~p~---~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~ 301 (362)
T KOG0192|consen 239 LLTGEIPFEDLAP------VQVASAVVVGGLRPPIPK---ECPPHLSSLMERCWLVDPSRRPSFLEIVSRLE 301 (362)
T ss_pred HHHCCCCCCCCCH------HHHHHHHHhcCCCCCCCc---cCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHH
Confidence 9999999875433 22233332 222222222 26678999999999999999999999999886
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-48 Score=301.29 Aligned_cols=212 Identities=30% Similarity=0.510 Sum_probs=179.9
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
++|.+|+++|++|+|++||+++++|+.+..+||||||++.|+|.++++... ...++..+.+.++.|||+|++||+++
T Consensus 246 ~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~-~~~l~~~~Ll~~a~qIaeGM~YLes~-- 322 (468)
T KOG0197|consen 246 EAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTRE-GGLLNLPQLLDFAAQIAEGMAYLESK-- 322 (468)
T ss_pred hHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcC-CCccchHHHHHHHHHHHHHHHHHHhC--
Confidence 578999999999999999999999999889999999999999999998732 34489999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-C
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-G 160 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g 160 (228)
++|||||..+|||++.++.+||+|||+++...++... ......+..|.|||.+....++.+|||||||++|||++| |
T Consensus 323 -~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G 401 (468)
T KOG0197|consen 323 -NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYG 401 (468)
T ss_pred -CccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccC
Confidence 9999999999999999999999999999965544332 222344678999999999999999999999999999998 9
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
+.||+.+... +.+..+.++...+.+ ..++.++.+++..||+.+|++|||++.+...|+
T Consensus 402 ~~py~~msn~------ev~~~le~GyRlp~P---~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~ 459 (468)
T KOG0197|consen 402 RVPYPGMSNE------EVLELLERGYRLPRP---EGCPDEVYELMKSCWHEDPEDRPTFETLREVLE 459 (468)
T ss_pred CCCCCCCCHH------HHHHHHhccCcCCCC---CCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHH
Confidence 9997765443 344444333332222 357788999999999999999999999988875
No 7
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-46 Score=279.85 Aligned_cols=201 Identities=27% Similarity=0.380 Sum_probs=176.7
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+...+|..+|.+++||+||+++..|++...+|+|+||+.||.|...+++.+. +++..+..++.+|+.||.|||+.
T Consensus 69 ~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~---F~E~~arfYlaEi~lAL~~LH~~- 144 (357)
T KOG0598|consen 69 VRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGR---FSEDRARFYLAEIVLALGYLHSK- 144 (357)
T ss_pred HHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCC---cchhHHHHHHHHHHHHHHHHHhC-
Confidence 45678899999999999999999999999999999999999999999987654 89999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
||+|||+||+|||++.+|.++|+|||+++..........+.+||+.|+|||++.+..++.++|.||||+++|+|++|.
T Consensus 145 --gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~ 222 (357)
T KOG0598|consen 145 --GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGK 222 (357)
T ss_pred --CeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCC
Confidence 999999999999999999999999999997666656666789999999999999999999999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP 217 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 217 (228)
+||. ..+.......+...+.+..+. -.+.+..++++++|..||++|.
T Consensus 223 pPF~------~~~~~~~~~~I~~~k~~~~p~---~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 223 PPFY------AEDVKKMYDKILKGKLPLPPG---YLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred CCCc------CccHHHHHHHHhcCcCCCCCc---cCCHHHHHHHHHHhccCHHHhc
Confidence 9975 344455666666666333221 2445678999999999999996
No 8
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-47 Score=294.16 Aligned_cols=209 Identities=27% Similarity=0.447 Sum_probs=186.6
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++-+..|+.+|+..+|+|||.+++.|-..+.+|+||||++||+|.|.+.... +++.++..+++++++||+|||.+
T Consensus 314 keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~~----~~E~qIA~Icre~l~aL~fLH~~- 388 (550)
T KOG0578|consen 314 KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKTR----MTEGQIAAICREILQGLKFLHAR- 388 (550)
T ss_pred hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhccc----ccHHHHHHHHHHHHHHHHHHHhc-
Confidence 4557899999999999999999999988899999999999999999987554 88999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
||+|||||.+||+++.+|.+||+|||.|..+........+..|||.|||||+.....|+.+.||||||+++.||+.|.
T Consensus 389 --gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGE 466 (550)
T KOG0578|consen 389 --GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGE 466 (550)
T ss_pred --ceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCC
Confidence 999999999999999999999999999999888777778889999999999999999999999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+||-. .++....+.+.....+... .....+..+.+++.+||..|+.+|+|+.|+|+
T Consensus 467 PPYln------E~PlrAlyLIa~ng~P~lk-~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 467 PPYLN------ENPLRALYLIATNGTPKLK-NPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred CCccC------CChHHHHHHHhhcCCCCcC-CccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 99643 4455566666554444433 33567788999999999999999999999986
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-45 Score=276.84 Aligned_cols=207 Identities=29% Similarity=0.455 Sum_probs=165.9
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++.+..|+.+|+.++|||||.+++++..++.+|+|||||+||+|.+++++.+. +++.++..++.|++.|+++||++
T Consensus 53 ~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~---l~e~t~r~Fm~QLA~alq~L~~~- 128 (429)
T KOG0595|consen 53 VELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGR---LPEATARHFMQQLASALQFLHEN- 128 (429)
T ss_pred HHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHC-
Confidence 45678999999999999999999999999999999999999999999987653 89999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCC------CceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLE------YEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLAL 155 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~------~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~ 155 (228)
+|+||||||+||+++.. -.+||.|||+++..... ....+.+|++.|||||++...+|+.|+|+||+|+++|
T Consensus 129 --~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~-~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ily 205 (429)
T KOG0595|consen 129 --NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG-SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILY 205 (429)
T ss_pred --CeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch-hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHH
Confidence 99999999999999875 35799999999987733 3345679999999999999999999999999999999
Q ss_pred HHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHH
Q 040501 156 EVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i 222 (228)
++++|+.||... ...+....+....- .........+....+++...+..+|.+|.+..+.
T Consensus 206 q~l~g~~Pf~a~------t~~eL~~~~~k~~~-~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~ 265 (429)
T KOG0595|consen 206 QCLTGKPPFDAE------TPKELLLYIKKGNE-IVPVLPAELSNPLRELLISLLQRNPKDRISFEDF 265 (429)
T ss_pred HHHhCCCCcccc------CHHHHHHHHhcccc-ccCchhhhccCchhhhhhHHHhcCccccCchHHh
Confidence 999999998632 22223222211111 1111112233345567777777777777665543
No 10
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-45 Score=283.30 Aligned_cols=207 Identities=26% Similarity=0.366 Sum_probs=175.3
Q ss_pred HHHHHHHHHHhccC-CCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+.+|+.++++++ ||||+++++++.....+|+||||+.||.|.+++...+. +.+..+..+++|+++|++|||+.
T Consensus 64 ~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~---l~E~~ar~~F~Qlisav~y~H~~- 139 (370)
T KOG0583|consen 64 ELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGR---LKEDEARKYFRQLISAVAYCHSR- 139 (370)
T ss_pred hhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCC---CChHHHHHHHHHHHHHHHHHHhC-
Confidence 34568999999998 99999999999999999999999999999999987433 77899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCC-CceEEeecccccccCCCCCCceecccccceeCCcccccCC-cc-cchhhhhHHHHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLE-YEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMK-VT-AKCDVYSFGVLALEVI 158 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~-~~~DiwslG~~l~~~~ 158 (228)
||+||||||+|++++.+ +.+||+|||++.............+|++.|+|||++.+.. |+ .++||||+|+++|.|+
T Consensus 140 --gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml 217 (370)
T KOG0583|consen 140 --GIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLL 217 (370)
T ss_pred --CEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHH
Confidence 99999999999999999 9999999999998743344566789999999999999987 86 6899999999999999
Q ss_pred hCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 159 KGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 159 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+|..||.. .+.......+......-.... . +.+...++.+||..||.+|+|+.++++
T Consensus 218 ~G~~PF~d------~~~~~l~~ki~~~~~~~p~~~-~--S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 218 CGRLPFDD------SNVPNLYRKIRKGEFKIPSYL-L--SPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred hCCCCCCC------ccHHHHHHHHhcCCccCCCCc-C--CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 99999864 233334444444443221111 1 667899999999999999999999973
No 11
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-45 Score=275.47 Aligned_cols=213 Identities=24% Similarity=0.395 Sum_probs=179.7
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+.+|++.++.++||||++++..|..+..+|+||++|++|++.+++...-... +++..+..+++++++||.|||++
T Consensus 68 ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~G-l~E~~Ia~iLre~LkaL~YLH~~- 145 (516)
T KOG0582|consen 68 LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDG-LEEASIATILREVLKALDYLHQN- 145 (516)
T ss_pred HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHcccc-ccHHHHHHHHHHHHHHHHHHHhc-
Confidence 3678999999999999999999999999999999999999999999998765443 89999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC----ceecccccceeCCcccccC--CcccchhhhhHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN----WTEFAGTYGYVAPELAYTM--KVTAKCDVYSFGVLAL 155 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~l~ 155 (228)
|.+|||||+.||+++.+|.++|+|||.+..+-..... .....|+++|+|||++... .|+.|+||||||++..
T Consensus 146 --G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ 223 (516)
T KOG0582|consen 146 --GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITAC 223 (516)
T ss_pred --CceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHH
Confidence 9999999999999999999999999977655433332 2456899999999996543 5899999999999999
Q ss_pred HHHhCCCCccccccccCCCchhhhhhhcCCCCC-----C-CchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 156 EVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLP-----P-LSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|+.+|+.||..... ...+-..++..++ . .......+..++.++|..||++||++|||++++++
T Consensus 224 ELA~G~aPf~k~pP------mkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 224 ELAHGHAPFSKYPP------MKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred HHhcCCCCcccCCh------HHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 99999999865543 3344444444443 1 12224566778999999999999999999999985
No 12
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-45 Score=276.01 Aligned_cols=210 Identities=27% Similarity=0.433 Sum_probs=169.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecC--eEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR--HSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
+.+.+|+++|++++|||||++++...... .++++|||+++|+|.+++.+.+. .+++..+..+.+|+++||+|||++
T Consensus 59 ~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~ 136 (313)
T KOG0198|consen 59 ESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSK 136 (313)
T ss_pred HHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 45899999999999999999999854444 68999999999999999987664 499999999999999999999999
Q ss_pred CCCCeeecCCCCCceEEcC-CCceEEeecccccccCCCCC---CceecccccceeCCcccccC-CcccchhhhhHHHHHH
Q 040501 81 CIPPIVHRDISSKNVLLDL-EYEAHVSDFGIAKFIQPDSS---NWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLAL 155 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~-~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~ 155 (228)
|++|+||||+||+++. ++.+||.|||++........ ......||+.|+|||++... ....++|||||||++.
T Consensus 137 ---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVv 213 (313)
T KOG0198|consen 137 ---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVV 213 (313)
T ss_pred ---CEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEE
Confidence 9999999999999999 79999999999887653111 13347899999999999853 3345999999999999
Q ss_pred HHHhCCCCccccccccCCCchhhhhhhc-CCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 156 EVIKGKHPRDFLSNVSSSNPNILVNEML-DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
||+||..||... .........+. ....|..+ ...+.+..+++.+|+..||.+|||+.++++-
T Consensus 214 EM~Tg~~PW~~~-----~~~~~~~~~ig~~~~~P~ip---~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 214 EMLTGKPPWSEF-----FEEAEALLLIGREDSLPEIP---DSLSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred eccCCCCcchhh-----cchHHHHHHHhccCCCCCCC---cccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 999999998642 11112222222 22222222 2366678999999999999999999999863
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-45 Score=282.12 Aligned_cols=206 Identities=27% Similarity=0.400 Sum_probs=177.9
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+..|-.+|.+| .||+|++++..|.+...+|+|+||+++|.|.+++...++ +++..+..++.+|+.||.|||+.
T Consensus 118 kYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gs---fde~caR~YAAeIldAleylH~~- 193 (604)
T KOG0592|consen 118 KYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGS---FDETCARFYAAEILDALEYLHSN- 193 (604)
T ss_pred chhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCc---chHHHHHHHHHHHHHHHHHHHhc-
Confidence 4456788899999 899999999999999999999999999999999987755 89999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-----------c--eecccccceeCCcccccCCcccchhhh
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-----------W--TEFAGTYGYVAPELAYTMKVTAKCDVY 148 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-----------~--~~~~~~~~y~aPE~~~~~~~~~~~Diw 148 (228)
||+||||||+|||++.+|+++|+|||.+..+...... . ..+.||..|.+||++.....+..+|+|
T Consensus 194 --GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiW 271 (604)
T KOG0592|consen 194 --GIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLW 271 (604)
T ss_pred --CceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchH
Confidence 9999999999999999999999999999877542211 2 458899999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 149 SFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 149 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+|||++|.|+.|.+||...++ ...+.+++....... .+.++.+.+||++.|..||.+|+|+.+|-+
T Consensus 272 AlGCilyQmlaG~PPFra~Ne------yliFqkI~~l~y~fp----~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 272 ALGCILYQMLAGQPPFRAANE------YLIFQKIQALDYEFP----EGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHHHHHHHhcCCCCCccccH------HHHHHHHHHhcccCC----CCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 999999999999999865443 345555555444322 245567899999999999999999988864
No 14
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.4e-45 Score=266.50 Aligned_cols=216 Identities=23% Similarity=0.386 Sum_probs=173.9
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+-.++|+++|++++|+|+|.++++|.....+++|+|||+..-|.+ +.+...+ ++...+..+++|++.|+.|+|+.
T Consensus 46 KIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~e-Le~~p~G--~~~~~vk~~l~Q~l~ai~~cHk~-- 120 (396)
T KOG0593|consen 46 KIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHE-LERYPNG--VPSELVKKYLYQLLKAIHFCHKN-- 120 (396)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHHHHH-HHhccCC--CCHHHHHHHHHHHHHHhhhhhhc--
Confidence 446899999999999999999999999999999999998755544 4444333 88899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
+++||||||+||+++.+|.+||+|||.++....+....+....|..|+|||.+.+ .+|....||||+||++.||++|.
T Consensus 121 -n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~ 199 (396)
T KOG0593|consen 121 -NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGE 199 (396)
T ss_pred -CeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCC
Confidence 9999999999999999999999999999988866667777889999999999887 67999999999999999999999
Q ss_pred CCccccccccCCC--------------------chhhhhhhcCCCC-CCCchhhhhhHHHHHHHHHHhhccCCCCCCCHH
Q 040501 162 HPRDFLSNVSSSN--------------------PNILVNEMLDPRL-PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQ 220 (228)
Q Consensus 162 ~p~~~~~~~~~~~--------------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 220 (228)
+.|+.....+... +....-.+..+.- .+.....++.+.-+.+++++||..||.+|++.+
T Consensus 200 pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~ 279 (396)
T KOG0593|consen 200 PLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCE 279 (396)
T ss_pred cCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHH
Confidence 9997654432210 0000111111110 111222344555689999999999999999999
Q ss_pred HHHH
Q 040501 221 TICQ 224 (228)
Q Consensus 221 ~il~ 224 (228)
++++
T Consensus 280 qll~ 283 (396)
T KOG0593|consen 280 QLLH 283 (396)
T ss_pred HHhc
Confidence 9874
No 15
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.1e-45 Score=279.98 Aligned_cols=211 Identities=25% Similarity=0.404 Sum_probs=188.6
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCe-EEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARH-SFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
|.....|+.++++++|||||.+.++|.+++. .+|+|+||+||++.+.+.+.. ...++++++..|+.|++.|+.|||+.
T Consensus 47 r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~ 125 (426)
T KOG0589|consen 47 RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN 125 (426)
T ss_pred hHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh
Confidence 4577899999999999999999999998888 999999999999999998755 45589999999999999999999998
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhC
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g 160 (228)
+|+|||||+.|||++.++.++|+|||+++..+.......+..||+.|++||.+.+..|..++|||||||++|||++-
T Consensus 126 ---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~l 202 (426)
T KOG0589|consen 126 ---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTL 202 (426)
T ss_pred ---hhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhc
Confidence 99999999999999999999999999999988766556678999999999999999999999999999999999999
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
+.+|. ..+......++......+.+ ..++.++..+|+.||..+|..||++.+++..
T Consensus 203 k~aF~------a~~m~~Li~ki~~~~~~Plp---~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 203 KPAFK------ASNMSELILKINRGLYSPLP---SMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ccccC------ccchHHHHHHHhhccCCCCC---ccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 99965 44555677777766654443 4677889999999999999999999999863
No 16
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-43 Score=274.40 Aligned_cols=224 Identities=41% Similarity=0.715 Sum_probs=182.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecC-eEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR-HSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++|..|++++.+++|||++++++||.+.+ ..++|+||+++|+|.+.+...... .++|.++++|+.++|.||+|||..+
T Consensus 116 ~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~ 194 (361)
T KOG1187|consen 116 REFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGC 194 (361)
T ss_pred hHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCC
Confidence 45999999999999999999999999888 599999999999999999875543 5899999999999999999999998
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceec-ccccceeCCcccccCCcccchhhhhHHHHHHHHHhC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF-AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~-~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g 160 (228)
+..|+|||||++|||+|.+...||+|||++............. .|+..|++||+......+.++||||+|+++.|+++|
T Consensus 195 ~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitg 274 (361)
T KOG1187|consen 195 PPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITG 274 (361)
T ss_pred CCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhC
Confidence 7779999999999999999999999999996544312222222 789999999999888899999999999999999999
Q ss_pred CCCccccccccCCCchh---------hhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 161 KHPRDFLSNVSSSNPNI---------LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
+.+.+............ ...+++++.+.............+..+..+|++.+|.+||++.++++.|+
T Consensus 275 r~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~ 350 (361)
T KOG1187|consen 275 RKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELE 350 (361)
T ss_pred CcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHH
Confidence 98865433111111111 34556666654222211145556889999999999999999999998884
No 17
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-42 Score=264.63 Aligned_cols=208 Identities=22% Similarity=0.329 Sum_probs=169.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeee----cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTH----ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLH 78 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh 78 (228)
+.+.+|+.++++++||||+++++++.+ ....+++|||+++++|.+++.... .+++...+.++.+++.|+.+||
T Consensus 63 ~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH 139 (283)
T PHA02988 63 DITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLY 139 (283)
T ss_pred HHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHH
Confidence 467799999999999999999999876 357899999999999999997643 3788999999999999999999
Q ss_pred hCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc--CCcccchhhhhHHHHHHH
Q 040501 79 HDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT--MKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 79 ~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~~l~~ 156 (228)
+.. +++||||||+||+++.++.+||+|||++....... ....++..|+|||.+.+ ..++.++||||||+++|+
T Consensus 140 ~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~e 214 (283)
T PHA02988 140 KYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWE 214 (283)
T ss_pred hcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHH
Confidence 731 88999999999999999999999999987654322 22457789999999876 578999999999999999
Q ss_pred HHhCCCCccccccccCCCchhhhhhhcCCCC-CCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 157 VIKGKHPRDFLSNVSSSNPNILVNEMLDPRL-PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|++|..||.... .......+..... ...+ ..++..+.+++.+||+.||.+|||++++++.|+
T Consensus 215 l~~g~~Pf~~~~------~~~~~~~i~~~~~~~~~~---~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~ 277 (283)
T PHA02988 215 IFTGKIPFENLT------TKEIYDLIINKNNSLKLP---LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLS 277 (283)
T ss_pred HHHCCCCCCCCC------HHHHHHHHHhcCCCCCCC---CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 999999986432 2222222221111 1111 245668999999999999999999999999886
No 18
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.7e-43 Score=284.93 Aligned_cols=214 Identities=27% Similarity=0.466 Sum_probs=184.4
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC-----------CCCCCHHHHHHHHHHH
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-----------AEELGWSRRINVIKGI 70 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~~l 70 (228)
|++|.+|++++..|+|||||++++.|.+++..++|+||+..|+|..+++.+.. ..+++..+.+.++.||
T Consensus 533 ~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QI 612 (774)
T KOG1026|consen 533 RQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQI 612 (774)
T ss_pred HHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999874221 2337889999999999
Q ss_pred HHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc--eecccccceeCCcccccCCcccchhhh
Q 040501 71 AHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW--TEFAGTYGYVAPELAYTMKVTAKCDVY 148 (228)
Q Consensus 71 ~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Diw 148 (228)
|.|+.||-++ .+|||||..+|++++++..|||+|||+++.+....... ....-+.+|||||.+...+++++||||
T Consensus 613 AaGM~YLs~~---~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVW 689 (774)
T KOG1026|consen 613 AAGMEYLSSH---HFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVW 689 (774)
T ss_pred HHHHHHHHhC---cccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhh
Confidence 9999999999 99999999999999999999999999999775443331 123457899999999999999999999
Q ss_pred hHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 149 SFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 149 slG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|+|+++||+++ |..||... ...+.++.+-.++..+. ..+++.++++|+..||+.+|++||+++||-..|+
T Consensus 690 s~GVvLWEIFsyG~QPy~gl------Sn~EVIe~i~~g~lL~~---Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~ 760 (774)
T KOG1026|consen 690 SFGVVLWEIFSYGKQPYYGL------SNQEVIECIRAGQLLSC---PENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQ 760 (774)
T ss_pred hhhhhhhhhhccccCccccc------chHHHHHHHHcCCcccC---CCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence 99999999997 88886533 34456666666666332 2578889999999999999999999999999886
No 19
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-43 Score=254.56 Aligned_cols=209 Identities=22% Similarity=0.389 Sum_probs=185.8
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++-.+|+.+|+++ .||+|+++.++++.+..+++|+|.++.|.|+|++...- .+++.....+++|+.+++.|||.+
T Consensus 67 EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa~- 142 (411)
T KOG0599|consen 67 EATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHAR- 142 (411)
T ss_pred HHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHHh-
Confidence 4556899999999 69999999999999999999999999999999997644 388999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc------CCcccchhhhhHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT------MKVTAKCDVYSFGVLAL 155 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~~l~ 155 (228)
+|+||||||+||+++++.+++|+|||.+..... .......+|||.|+|||.+.. ..|+...|+|+.|+++|
T Consensus 143 --~IVHRDLKpENILlddn~~i~isDFGFa~~l~~-GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImy 219 (411)
T KOG0599|consen 143 --NIVHRDLKPENILLDDNMNIKISDFGFACQLEP-GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMY 219 (411)
T ss_pred --hhhhcccChhheeeccccceEEeccceeeccCC-chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHH
Confidence 999999999999999999999999999988764 344566899999999998753 35788899999999999
Q ss_pred HHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 156 EVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.++.|-+||-- ..+..+...+..++....+..+.+.+....+||++||+.||.+|.|++|++.
T Consensus 220 TLLaGcpPFwH------RkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 220 TLLAGCPPFWH------RKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHcCCCchhH------HHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 99999999743 2234467778888888888889999999999999999999999999999875
No 20
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-43 Score=269.79 Aligned_cols=213 Identities=20% Similarity=0.328 Sum_probs=175.7
Q ss_pred HHHHHHHhccC-CCccceeeeeeeecC-eEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 6 LREITVLTEIR-HRNIVKFYGFCTHAR-HSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 6 ~~E~~~l~~l~-h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.||++.|++++ ||||+++.+++.++. .+|+|||||+. +|+.++++. ...+++..+..|+.||++||+|+|..
T Consensus 56 LREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~--- 129 (538)
T KOG0661|consen 56 LREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKH--- 129 (538)
T ss_pred HHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhc---
Confidence 58999999997 999999999998877 99999999965 899998876 34599999999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHhCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|+.|||+||+|||+.....+||.|||+++.+. .....+....|..|+|||++... .|+.+.|+|++||+++|+.+.++
T Consensus 130 GfFHRDlKPENiLi~~~~~iKiaDFGLARev~-SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrP 208 (538)
T KOG0661|consen 130 GFFHRDLKPENILISGNDVIKIADFGLAREVR-SKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRP 208 (538)
T ss_pred CcccccCChhheEecccceeEecccccccccc-cCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcc
Confidence 99999999999999988899999999999775 34556777889999999987654 58999999999999999999999
Q ss_pred CccccccccC---------------CCchhhhhhhcCCCCCCC-----chhhhhhHHHHHHHHHHhhccCCCCCCCHHHH
Q 040501 163 PRDFLSNVSS---------------SNPNILVNEMLDPRLPPL-----SVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222 (228)
Q Consensus 163 p~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i 222 (228)
.|++.++.+. ......+.+.+.-.++.. .......+.+..++|.+|+..||.+|||+.++
T Consensus 209 LFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~a 288 (538)
T KOG0661|consen 209 LFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQA 288 (538)
T ss_pred cCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHH
Confidence 9876544321 111123333333333322 22344577788999999999999999999999
Q ss_pred HHH
Q 040501 223 CQL 225 (228)
Q Consensus 223 l~~ 225 (228)
++.
T Consensus 289 l~~ 291 (538)
T KOG0661|consen 289 LQH 291 (538)
T ss_pred hcC
Confidence 863
No 21
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=251.46 Aligned_cols=194 Identities=26% Similarity=0.336 Sum_probs=171.8
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
...+|..+|+.+.||+++++++.|.+...+|+||||++||.|+++++..+. +++..+..++.|++.||+|||+.
T Consensus 90 H~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~r---F~e~~arFYAAeivlAleylH~~--- 163 (355)
T KOG0616|consen 90 HTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGR---FSEPHARFYAAEIVLALEYLHSL--- 163 (355)
T ss_pred HHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCC---CCchhHHHHHHHHHHHHHHHHhc---
Confidence 456799999999999999999999999999999999999999999987654 89999999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p 163 (228)
+|++||+||+|||++++|.+||+|||.++..... .-+.+|||.|+|||++....+..++|.||||+++|||+.|.+|
T Consensus 164 ~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pP 240 (355)
T KOG0616|consen 164 DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPP 240 (355)
T ss_pred CeeeccCChHHeeeccCCcEEEEeccceEEecCc---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999987643 3457999999999999999999999999999999999999999
Q ss_pred ccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCC
Q 040501 164 RDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216 (228)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 216 (228)
|... ++....+.++..+.... .-.+.++.+|+++.|+.|-.+|
T Consensus 241 F~~~------~~~~iY~KI~~~~v~fP----~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 241 FYDD------NPIQIYEKILEGKVKFP----SYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred CcCC------ChHHHHHHHHhCcccCC----cccCHHHHHHHHHHHhhhhHhh
Confidence 7533 34566677777665432 2345578899999999999888
No 22
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.7e-42 Score=269.83 Aligned_cols=215 Identities=24% Similarity=0.417 Sum_probs=169.2
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeec-CeEEEEEEeecCCChhhhhhcCCC--------------------------
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHA-RHSFLVYEYLENGSLSVILNNDTS-------------------------- 54 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~-------------------------- 54 (228)
+.+.+|+.++..+ +||||+++++++... ..++++|||+++|+|.+++.....
T Consensus 55 ~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (338)
T cd05102 55 KALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVD 134 (338)
T ss_pred HHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccc
Confidence 4688999999999 899999999988654 468999999999999999875321
Q ss_pred ---------------------------------CCCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCC
Q 040501 55 ---------------------------------AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY 101 (228)
Q Consensus 55 ---------------------------------~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~ 101 (228)
...+++..+..++.|++.||.|||+. |++||||||+||+++.++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~ 211 (338)
T cd05102 135 RRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENN 211 (338)
T ss_pred cccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCC
Confidence 12367788899999999999999999 999999999999999999
Q ss_pred ceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-CCCCccccccccCCCchhh
Q 040501 102 EAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNIL 178 (228)
Q Consensus 102 ~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~ 178 (228)
.++|+|||++......... .....++..|+|||++.+..++.++||||||+++|+|++ |..||..... ....
T Consensus 212 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~-----~~~~ 286 (338)
T cd05102 212 VVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI-----NEEF 286 (338)
T ss_pred cEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc-----cHHH
Confidence 9999999998765332211 122345678999999988889999999999999999997 9999864321 1111
Q ss_pred hhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 179 VNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
............ ....+..+.+++.+||+.||.+|||+.++++.|++
T Consensus 287 ~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~ 333 (338)
T cd05102 287 CQRLKDGTRMRA---PENATPEIYRIMLACWQGDPKERPTFSALVEILGD 333 (338)
T ss_pred HHHHhcCCCCCC---CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 122222211111 12445678999999999999999999999999873
No 23
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.3e-42 Score=269.85 Aligned_cols=206 Identities=24% Similarity=0.291 Sum_probs=170.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.+|+.++++++||||+++++.+..+...|+||||+.+++|.+++.... .+++.++..++.|++.||+|||+.
T Consensus 40 ~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~-- 114 (323)
T cd05571 40 AHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALGYLHSC-- 114 (323)
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 356789999999999999999999999999999999999999999887543 378999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|||||||++|+|++|..
T Consensus 115 -~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~ 193 (323)
T cd05571 115 -DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 193 (323)
T ss_pred -CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCC
Confidence 9999999999999999999999999998754333333444678999999999998889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP-----NMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~il~ 224 (228)
||.... .......+....... ....+.++.++|.+||+.||++|| ++.++++
T Consensus 194 Pf~~~~------~~~~~~~~~~~~~~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 194 PFYNQD------HEKLFELILMEEIRF----PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCCCC------HHHHHHHHHcCCCCC----CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 985322 122222222222111 123556789999999999999999 7888875
No 24
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.1e-42 Score=267.51 Aligned_cols=204 Identities=25% Similarity=0.319 Sum_probs=167.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.++++++||||+++++.+......|+||||+.+++|.+++.... .+++..+..++.|++.||.|||+.
T Consensus 38 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~-- 112 (312)
T cd05585 38 THTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREG---RFDLSRARFYTAELLCALENLHKF-- 112 (312)
T ss_pred HHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 456789999999999999999999999999999999999999999987543 388899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|||||||++|+|++|..
T Consensus 113 -~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~ 191 (312)
T cd05585 113 -NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLP 191 (312)
T ss_pred -CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCC
Confidence 9999999999999999999999999998754333333344568999999999999889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i 222 (228)
||.... .......+....... ....+..+.+++.+||..||.+||++..+
T Consensus 192 pf~~~~------~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~L~~dp~~R~~~~~~ 241 (312)
T cd05585 192 PFYDEN------VNEMYRKILQEPLRF----PDGFDRDAKDLLIGLLSRDPTRRLGYNGA 241 (312)
T ss_pred CcCCCC------HHHHHHHHHcCCCCC----CCcCCHHHHHHHHHHcCCCHHHcCCCCCH
Confidence 986321 222333333322211 12355678899999999999999864333
No 25
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1e-42 Score=246.32 Aligned_cols=210 Identities=24% Similarity=0.355 Sum_probs=183.8
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
-+.+.+|+.+-+.|+||||+++.+...+....|+|+|++.|+.|..-|-.. ..+++..+...++|++++|.|+|..
T Consensus 54 ~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n- 129 (355)
T KOG0033|consen 54 FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSN- 129 (355)
T ss_pred HHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 357889999999999999999999999999999999999999885544322 3378888899999999999999999
Q ss_pred CCCeeecCCCCCceEEcC---CCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDL---EYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~---~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~ 158 (228)
||+|||+||+|+++.. ..-+||+|||++...+ ....+....|+|.|+|||++....++..+|||+-|+++|-++
T Consensus 130 --~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL 206 (355)
T KOG0033|consen 130 --GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 206 (355)
T ss_pred --CceeccCChhheeeeeccCCCceeecccceEEEeC-CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHH
Confidence 9999999999999943 3558999999999887 556678889999999999999999999999999999999999
Q ss_pred hCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 159 KGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 159 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.|.+||. ..+.....+++..+.....+..+...+++..+|+++||..||.+|+|+.|.++
T Consensus 207 ~G~~PF~------~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 207 VGYPPFW------DEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred hCCCCCC------CccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 9999964 33455677777777776666677888889999999999999999999999875
No 26
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.7e-42 Score=265.32 Aligned_cols=221 Identities=22% Similarity=0.392 Sum_probs=169.4
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC----------------CCCCCHHHHHH
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS----------------AEELGWSRRIN 65 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~----------------~~~~~~~~~~~ 65 (228)
++.|.+|++++.+++||||+++++++......+++|||+.+++|.+++..... ...+++..++.
T Consensus 63 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (304)
T cd05096 63 RNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLH 142 (304)
T ss_pred HHHHHHHHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHH
Confidence 35688999999999999999999999999999999999999999998864321 12367788999
Q ss_pred HHHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCccc
Q 040501 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTA 143 (228)
Q Consensus 66 ~~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~ 143 (228)
++.|++.||.|||+. |++|+||||+||+++.++.+||+|||++......... .....++..|+|||++.+..++.
T Consensus 143 i~~~i~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 219 (304)
T cd05096 143 VALQIASGMKYLSSL---NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTT 219 (304)
T ss_pred HHHHHHHHHHHHHHC---CccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCc
Confidence 999999999999999 9999999999999999999999999998765432211 11234467899999998888999
Q ss_pred chhhhhHHHHHHHHHh--CCCCccccccccCCCchhhhhhhcCCC-CCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHH
Q 040501 144 KCDVYSFGVLALEVIK--GKHPRDFLSNVSSSNPNILVNEMLDPR-LPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQ 220 (228)
Q Consensus 144 ~~DiwslG~~l~~~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 220 (228)
++||||||+++|+|++ +..||....... ............ ..........++..+.+++.+||..||.+|||+.
T Consensus 220 ~~Dv~slG~~l~el~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~ 296 (304)
T cd05096 220 ASDVWAFGVTLWEILMLCKEQPYGELTDEQ---VIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFS 296 (304)
T ss_pred hhhhHHHHHHHHHHHHccCCCCCCcCCHHH---HHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHH
Confidence 9999999999999986 556665332111 011111111100 0000011124456789999999999999999999
Q ss_pred HHHHHhhC
Q 040501 221 TICQLLCK 228 (228)
Q Consensus 221 ~il~~l~~ 228 (228)
++.+.|++
T Consensus 297 ~i~~~l~~ 304 (304)
T cd05096 297 DIHAFLTE 304 (304)
T ss_pred HHHHHHhC
Confidence 99999874
No 27
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-44 Score=269.39 Aligned_cols=207 Identities=27% Similarity=0.453 Sum_probs=180.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
++++.|+.+|..++++||.++++.+..+..+|++|||+.||++.+.+..+.. +.+..+..++++++.|+.|||++
T Consensus 56 ediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~---~~E~~i~~ilre~l~~l~ylH~~-- 130 (467)
T KOG0201|consen 56 EDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNI---LDEFEIAVILREVLKGLDYLHSE-- 130 (467)
T ss_pred HHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCC---CccceeeeehHHHHHHhhhhhhc--
Confidence 5678899999999999999999999999999999999999999999976543 46777778999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
+.+|||||+.||+++.+|.+|+.|||.+...........++.||+.|||||++.+..|+.++||||||++.+||.+|.+
T Consensus 131 -~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GeP 209 (467)
T KOG0201|consen 131 -KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEP 209 (467)
T ss_pred -ceecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCC
Confidence 9999999999999999999999999999888766666678899999999999998899999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|+....+ .....-+....+|.... .++..+.++|..||++||+.||||+++++
T Consensus 210 P~s~~hP------mrvlflIpk~~PP~L~~---~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 210 PHSKLHP------MRVLFLIPKSAPPRLDG---DFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred CCcccCc------ceEEEeccCCCCCcccc---ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 9765443 33444444444443332 67778999999999999999999999986
No 28
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-42 Score=272.81 Aligned_cols=204 Identities=26% Similarity=0.418 Sum_probs=180.5
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+.+|+-+|+.+.|||++.+++.++.+.++|+|.||+.||-|++++-+++. +++..+.++++|++.|+.|||..
T Consensus 58 ~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~---l~e~eaa~ff~QIi~gv~yCH~~--- 131 (786)
T KOG0588|consen 58 GIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGP---LPEREAAHFFRQILDGVSYCHAF--- 131 (786)
T ss_pred chhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHhhh---
Confidence 478999999999999999999999999999999999999999999987665 88899999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcc-cchhhhhHHHHHHHHHhCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVT-AKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslG~~l~~~~~g~~ 162 (228)
+|+|||+||+|++++..+.+||.|||++..... .....+-+|+|.|.+||++.|.+|. .++||||-|+++|.+++|+.
T Consensus 132 ~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~-gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~L 210 (786)
T KOG0588|consen 132 NICHRDLKPENLLLDVKNNIKIADFGMASLEVP-GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKL 210 (786)
T ss_pred cceeccCCchhhhhhcccCEeeeccceeecccC-CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCC
Confidence 999999999999999999999999999987543 3345567999999999999999985 58999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||+ ..+....+..+.++.+.-. ...+.+..+|+.+||..||..|.|.++|++
T Consensus 211 PFd------DdNir~LLlKV~~G~f~MP----s~Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 211 PFD------DDNIRVLLLKVQRGVFEMP----SNISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred CCC------CccHHHHHHHHHcCcccCC----CcCCHHHHHHHHHHhccCccccccHHHHhh
Confidence 975 4556666666666655322 366778899999999999999999999986
No 29
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-42 Score=245.30 Aligned_cols=217 Identities=22% Similarity=0.304 Sum_probs=172.3
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeec-----CeEEEEEEeecCCChhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHH
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHA-----RHSFLVYEYLENGSLSVILNNDTS-AEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~ 75 (228)
.+..++|++..++++|||+++++++...+ ...|++++|...|+|.+.+.+... ...+++.+++.++.++++||+
T Consensus 62 ~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~ 141 (302)
T KOG2345|consen 62 IEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLE 141 (302)
T ss_pred HHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHH
Confidence 56788999999999999999999987433 359999999999999999886433 335899999999999999999
Q ss_pred HhhhCCCCC--eeecCCCCCceEEcCCCceEEeecccccccCCCCCC---------ceecccccceeCCcccccC---Cc
Q 040501 76 YLHHDCIPP--IVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN---------WTEFAGTYGYVAPELAYTM---KV 141 (228)
Q Consensus 76 ~lh~~~~~~--i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~---~~ 141 (228)
+||.. . +.||||||.||++++++.+++.|||.++...-.... +.....+..|+|||.+.-. ..
T Consensus 142 ~lH~~---~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti 218 (302)
T KOG2345|consen 142 ALHEK---EPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTI 218 (302)
T ss_pred HHhcc---CCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCccc
Confidence 99999 6 999999999999999999999999988765322111 3345678899999988644 46
Q ss_pred ccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHH
Q 040501 142 TAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQT 221 (228)
Q Consensus 142 ~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 221 (228)
++++|||||||++|.|+.|..||+...+.... ....+..+...... ...+++.+.++|++||+.||.+||++.+
T Consensus 219 ~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgS----laLAv~n~q~s~P~--~~~yse~l~~lik~mlqvdP~qRP~i~~ 292 (302)
T KOG2345|consen 219 TERTDIWSLGCTLYAMMFGESPFERIYQQGGS----LALAVQNAQISIPN--SSRYSEALHQLIKSMLQVDPNQRPTIPE 292 (302)
T ss_pred ccccchhhhhHHHHHHHHcCCcchHHhhcCCe----EEEeeeccccccCC--CCCccHHHHHHHHHHhcCCcccCCCHHH
Confidence 78999999999999999999999765442211 11112222221111 1237788999999999999999999999
Q ss_pred HHHHhh
Q 040501 222 ICQLLC 227 (228)
Q Consensus 222 il~~l~ 227 (228)
++..+.
T Consensus 293 ll~~~d 298 (302)
T KOG2345|consen 293 LLSKLD 298 (302)
T ss_pred HHHHHH
Confidence 998775
No 30
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.4e-41 Score=258.31 Aligned_cols=214 Identities=25% Similarity=0.448 Sum_probs=174.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC-------------CCCCCHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-------------AEELGWSRRINVIKG 69 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~~ 69 (228)
++|.+|++++++++||||+++++++......|+++||+.+++|.+++..... ...++...++.++.|
T Consensus 53 ~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 132 (283)
T cd05048 53 QEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQ 132 (283)
T ss_pred HHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHH
Confidence 4688999999999999999999999988899999999999999999875322 134788899999999
Q ss_pred HHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhh
Q 040501 70 IAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDV 147 (228)
Q Consensus 70 l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di 147 (228)
++.||+|||+. |++|+||||+||+++.++.++|+|||++......... .....+++.|+|||.+.+..++.++|+
T Consensus 133 l~~al~~lH~~---~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv 209 (283)
T cd05048 133 IAAGMEYLSSH---HFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDI 209 (283)
T ss_pred HHHHHHHHHhC---CeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhH
Confidence 99999999999 9999999999999999999999999998765332211 122345678999999988889999999
Q ss_pred hhHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHh
Q 040501 148 YSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226 (228)
Q Consensus 148 wslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 226 (228)
||||+++|+|++ |..||.... .......+........ ...++.++.+++.+||+.||.+|||+.++++.|
T Consensus 210 ~slG~il~el~~~g~~p~~~~~------~~~~~~~i~~~~~~~~---~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l 280 (283)
T cd05048 210 WSFGVVLWEIFSYGLQPYYGFS------NQEVIEMIRSRQLLPC---PEDCPARVYALMIECWNEIPARRPRFKDIHTRL 280 (283)
T ss_pred HHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHcCCcCCC---cccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 999999999998 999975322 1222233322222221 235677899999999999999999999999998
Q ss_pred hC
Q 040501 227 CK 228 (228)
Q Consensus 227 ~~ 228 (228)
++
T Consensus 281 ~~ 282 (283)
T cd05048 281 RS 282 (283)
T ss_pred hc
Confidence 74
No 31
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.9e-42 Score=264.46 Aligned_cols=214 Identities=26% Similarity=0.384 Sum_probs=169.8
Q ss_pred HHHHHHHHhccCCCccceeeeeeeec--CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 5 FLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 5 ~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+||.+|++|.||||+++.+...+. ..+|+|+|||+. +|.-++....- .+++.++..++.||+.||.|||++
T Consensus 163 ~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~v--kft~~qIKc~mkQLl~Gl~~cH~~-- 237 (560)
T KOG0600|consen 163 AIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGV--KFTEPQIKCYMKQLLEGLEYCHSR-- 237 (560)
T ss_pred HHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCc--ccChHHHHHHHHHHHHHHHHHhhc--
Confidence 46999999999999999999999876 689999999976 67777655432 399999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHhC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~g 160 (228)
|+.|||||.+|||++.+|.+||.|||++++....... .+....|..|+|||.+.|. .|+.+.|+||.||++.||+.|
T Consensus 238 -gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~g 316 (560)
T KOG0600|consen 238 -GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLG 316 (560)
T ss_pred -CeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcC
Confidence 9999999999999999999999999999977655433 6667789999999998876 599999999999999999999
Q ss_pred CCCccccccccCCCch--------hhhhh--------hcCCCCC---CCchhhhhhHHHHHHHHHHhhccCCCCCCCHHH
Q 040501 161 KHPRDFLSNVSSSNPN--------ILVNE--------MLDPRLP---PLSVDIRGKVISIMEVAFLCLDNNPESRPNMQT 221 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~--------~~~~~--------~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 221 (228)
++.|+...++...+.. +.... ...+..+ .........+....+|+..+|..||.+|.|+.+
T Consensus 317 kPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~ 396 (560)
T KOG0600|consen 317 KPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASS 396 (560)
T ss_pred CCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHH
Confidence 9998765444321110 00011 0001000 011113344556789999999999999999999
Q ss_pred HHH
Q 040501 222 ICQ 224 (228)
Q Consensus 222 il~ 224 (228)
+++
T Consensus 397 aL~ 399 (560)
T KOG0600|consen 397 ALQ 399 (560)
T ss_pred Hhc
Confidence 875
No 32
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=8.5e-42 Score=265.23 Aligned_cols=206 Identities=24% Similarity=0.290 Sum_probs=168.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.+|+++++.++||||+++++.|......|+||||+.+++|..++.... .+++..+..++.|++.||.|||+.
T Consensus 40 ~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~-- 114 (323)
T cd05595 40 AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR-- 114 (323)
T ss_pred HHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 346789999999999999999999999999999999999999988886543 378999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||.+.+..++.++|+|||||++|+|++|..
T Consensus 115 -~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~ 193 (323)
T cd05595 115 -DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 193 (323)
T ss_pred -CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCC
Confidence 9999999999999999999999999988754333333334568899999999988889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP-----NMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~il~ 224 (228)
||.... .......+....... ....+.++.++|.+||+.||.+|| ++.++++
T Consensus 194 Pf~~~~------~~~~~~~~~~~~~~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 194 PFYNQD------HERLFELILMEEIRF----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCCCCC------HHHHHHHHhcCCCCC----CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 985322 122222222222111 123456789999999999999998 7888764
No 33
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.3e-41 Score=264.32 Aligned_cols=206 Identities=23% Similarity=0.319 Sum_probs=169.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.+|+.+++.++||||+++++.|..+...|+||||+.+++|.+++.... .+....+..++.|++.||.|||+.
T Consensus 45 ~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~-- 119 (323)
T cd05584 45 AHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQ-- 119 (323)
T ss_pred HHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 346789999999999999999999999999999999999999999987543 277888889999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++||||||+++|+|++|..
T Consensus 120 -~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~ 198 (323)
T cd05584 120 -GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAP 198 (323)
T ss_pred -CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCC
Confidence 9999999999999999999999999998754333333334568899999999988888999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP-----NMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~il~ 224 (228)
||.... .......+....... ....+..+.++|.+||+.+|.+|| ++.++++
T Consensus 199 pf~~~~------~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 199 PFTAEN------RKKTIDKILKGKLNL----PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CCCCCC------HHHHHHHHHcCCCCC----CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 986432 222333333333211 123455788999999999999999 7887765
No 34
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.6e-42 Score=270.28 Aligned_cols=205 Identities=27% Similarity=0.396 Sum_probs=178.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++||||+.++++|+...++|+|.||+.| +|+.++..... ++++++..++.+++.||.|||+.
T Consensus 46 ~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~d~~---lpEe~v~~~a~~LVsaL~yLhs~-- 119 (808)
T KOG0597|consen 46 KNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQDGK---LPEEQVRAIAYDLVSALYYLHSN-- 119 (808)
T ss_pred HHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHhc--
Confidence 4578999999999999999999999999999999999977 99999876543 89999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
+|.|||+||.||+++.+|.+|++|||+++.++......+...|||.|||||...+..|+..+|+|||||++||+++|++
T Consensus 120 -rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~P 198 (808)
T KOG0597|consen 120 -RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQP 198 (808)
T ss_pred -CcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999998877777778899999999999999999999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||-. .........+........ ...+..+..++...|.+||.+|.|..+++.
T Consensus 199 PF~a------~si~~Lv~~I~~d~v~~p----~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 199 PFYA------RSITQLVKSILKDPVKPP----STASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred CchH------HHHHHHHHHHhcCCCCCc----ccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 9742 122334444444333222 255567889999999999999999988764
No 35
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.3e-41 Score=264.66 Aligned_cols=206 Identities=25% Similarity=0.303 Sum_probs=169.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.+|+++++.++||||+++.+.+......|+||||+.+++|.+++.... .+++.++..++.|++.||.|||+.
T Consensus 40 ~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~-- 114 (328)
T cd05593 40 AHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRER---VFSEDRTRFYGAEIVSALDYLHSG-- 114 (328)
T ss_pred HHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 457789999999999999999999999999999999999999998886543 388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++||||||+||+++.++.+||+|||++..............|++.|+|||.+.+..++.++|||||||++|+|++|..
T Consensus 115 -~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~ 193 (328)
T cd05593 115 -KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 193 (328)
T ss_pred -CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCC
Confidence 9999999999999999999999999998754333333334568999999999988889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP-----NMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~il~ 224 (228)
||..... ......+....... ....+.++.++|.+||+.||.+|+ ++.++++
T Consensus 194 Pf~~~~~------~~~~~~~~~~~~~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 194 PFYNQDH------EKLFELILMEDIKF----PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred CCCCCCH------HHHHHHhccCCccC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 9853221 12222222221111 123456788999999999999997 8888875
No 36
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.2e-42 Score=259.05 Aligned_cols=203 Identities=24% Similarity=0.405 Sum_probs=175.7
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+.+|+++++.|+||||+.++++|+..+.+.|||||..+|.|+|++.+.+. +++..+..+++||.+|+.|+|..
T Consensus 99 hIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~---LsErEaRhfFRQIvSAVhYCHkn--- 172 (668)
T KOG0611|consen 99 HIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGS---LSEREARHFFRQIVSAVHYCHKN--- 172 (668)
T ss_pred HHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHhhc---
Confidence 467899999999999999999999999999999999999999999998765 89999999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcc-cchhhhhHHHHHHHHHhCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVT-AKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslG~~l~~~~~g~~ 162 (228)
+++|||||.+||+++.++++||.|||++...... ....+++|++-|.+||++.+..|. ...|.||||+++|.++.|..
T Consensus 173 rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~-kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtM 251 (668)
T KOG0611|consen 173 RVVHRDLKLENILLDQNNNIKIADFGLSNLYADK-KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTM 251 (668)
T ss_pred cceecccchhheeecCCCCeeeeccchhhhhccc-cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhccc
Confidence 9999999999999999999999999999876643 334668999999999999999885 57999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||+. .+-.....++..+..... ..+....-||++||..||.+|.|+.+|..
T Consensus 252 PFDG------~Dhk~lvrQIs~GaYrEP-----~~PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 252 PFDG------RDHKRLVRQISRGAYREP-----ETPSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred ccCC------chHHHHHHHhhcccccCC-----CCCchHHHHHHHHHhcCcccchhHHHHhh
Confidence 9763 334445555555544321 22234568999999999999999998864
No 37
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.9e-41 Score=262.39 Aligned_cols=213 Identities=23% Similarity=0.361 Sum_probs=168.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++++..+...++||||+++++|.+++.... .++...+..++.|++.||.|||+.+
T Consensus 48 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~- 123 (331)
T cd06649 48 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKH- 123 (331)
T ss_pred HHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcC-
Confidence 568899999999999999999999999999999999999999999987543 3788999999999999999999862
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
+++|+||||+||+++.++.++|+|||++....... .....+++.|+|||.+.+..++.++|||||||++|+|++|..
T Consensus 124 -~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~ 200 (331)
T cd06649 124 -QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRY 200 (331)
T ss_pred -CEEcCCCChhhEEEcCCCcEEEccCcccccccccc--cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCC
Confidence 69999999999999999999999999987653222 233468899999999998889999999999999999999999
Q ss_pred CccccccccCCC-----------c-----------------------------hhhhhhhcCCCCCCCchhhhhhHHHHH
Q 040501 163 PRDFLSNVSSSN-----------P-----------------------------NILVNEMLDPRLPPLSVDIRGKVISIM 202 (228)
Q Consensus 163 p~~~~~~~~~~~-----------~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (228)
||.......... . ......+.....+.. ....++.++.
T Consensus 201 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ 278 (331)
T cd06649 201 PIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKL--PNGVFTPDFQ 278 (331)
T ss_pred CCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCC--CCccccHHHH
Confidence 985322110000 0 000000000000000 0123566799
Q ss_pred HHHHHhhccCCCCCCCHHHHHH
Q 040501 203 EVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 203 ~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++|.+||+.||++|||+.++++
T Consensus 279 ~li~~~L~~~P~~Rpt~~ell~ 300 (331)
T cd06649 279 EFVNKCLIKNPAERADLKMLMN 300 (331)
T ss_pred HHHHHHccCCcccCCCHHHHhc
Confidence 9999999999999999999986
No 38
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.5e-41 Score=254.61 Aligned_cols=212 Identities=24% Similarity=0.372 Sum_probs=171.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.+|+++++.++||||+++++++..+...++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+.
T Consensus 51 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~-- 126 (266)
T cd05064 51 RGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEM-- 126 (266)
T ss_pred HHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 468899999999999999999999999999999999999999999987643 2388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-C
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-G 160 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g 160 (228)
|++|+||||+||+++.++.++++|||.+......... .....++..|+|||.+.+..++.++||||||+++|++++ |
T Consensus 127 -~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g 205 (266)
T cd05064 127 -GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYG 205 (266)
T ss_pred -CEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999977654322111 111234568999999988889999999999999999775 9
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
..||..... ......+.+....+. ...++..+.+++.+||+.+|.+|||+.++++.|.+
T Consensus 206 ~~p~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 206 ERPYWDMSG------QDVIKAVEDGFRLPA---PRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred CCCcCcCCH------HHHHHHHHCCCCCCC---CCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 999864322 122222222221111 12456678999999999999999999999999864
No 39
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.5e-41 Score=274.67 Aligned_cols=210 Identities=24% Similarity=0.290 Sum_probs=172.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND-TSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
..+.+|+.+++.++||||++++++|..+...|+||||+.+++|.+++... .....++...+..++.|++.||.|||+.
T Consensus 110 ~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~- 188 (478)
T PTZ00267 110 AYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR- 188 (478)
T ss_pred HHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 35678999999999999999999999999999999999999999887542 2233478899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCC--CceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS--NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
|++||||||+||+++.++.++|+|||++........ ......|++.|+|||++.+..++.++|||||||++|+|++
T Consensus 189 --~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t 266 (478)
T PTZ00267 189 --KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLT 266 (478)
T ss_pred --CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHh
Confidence 999999999999999999999999999986543322 1234568999999999998889999999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|..||.... .......+......+.. ...+..+.++|.+||..||.+|||+.++++
T Consensus 267 g~~Pf~~~~------~~~~~~~~~~~~~~~~~---~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 267 LHRPFKGPS------QREIMQQVLYGKYDPFP---CPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCCCCCCCC------HHHHHHHHHhCCCCCCC---ccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 999985322 22333333333322211 234567899999999999999999999874
No 40
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=5.5e-41 Score=255.89 Aligned_cols=215 Identities=30% Similarity=0.514 Sum_probs=175.1
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC-----------CCCCCHHHHHHHHHHH
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-----------AEELGWSRRINVIKGI 70 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~~l 70 (228)
++.+.+|+++++.++|+||+++++++......+++|||+.+++|.+++..... ...+++.++..++.|+
T Consensus 52 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i 131 (280)
T cd05049 52 RKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQI 131 (280)
T ss_pred HHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999875421 2347888999999999
Q ss_pred HHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCC--CceecccccceeCCcccccCCcccchhhh
Q 040501 71 AHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS--NWTEFAGTYGYVAPELAYTMKVTAKCDVY 148 (228)
Q Consensus 71 ~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 148 (228)
+.++.+||+. |++|+||+|+||+++.++.++|+|||.+........ ......+++.|+|||.+.+..++.++|||
T Consensus 132 ~~~l~~lH~~---~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 208 (280)
T cd05049 132 ASGMVYLASQ---HFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW 208 (280)
T ss_pred HHHHHHHhhC---CeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHH
Confidence 9999999999 999999999999999999999999999875432221 11223446789999999988899999999
Q ss_pred hHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 149 SFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 149 slG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|||+++|+|++ |..||.... .......+......... ...+..+.+++.+||..||.+|||+.++++.|+
T Consensus 209 slG~il~e~~~~g~~p~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 209 SFGVVLWEIFTYGKQPWYGLS------NEEVIECITQGRLLQRP---RTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHcCCcCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 99999999998 999975332 12223333333322211 245667899999999999999999999999987
Q ss_pred C
Q 040501 228 K 228 (228)
Q Consensus 228 ~ 228 (228)
+
T Consensus 280 ~ 280 (280)
T cd05049 280 K 280 (280)
T ss_pred C
Confidence 5
No 41
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=4.2e-41 Score=257.92 Aligned_cols=214 Identities=29% Similarity=0.521 Sum_probs=174.3
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC-------------CCCCCHHHHHHHHH
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-------------AEELGWSRRINVIK 68 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~ 68 (228)
++.+.+|++++++++|+||+++++++......++||||+++++|.+++..+.. ...+++.+++.++.
T Consensus 51 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 130 (291)
T cd05094 51 RKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 130 (291)
T ss_pred HHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHH
Confidence 35688999999999999999999999999999999999999999999875431 23478899999999
Q ss_pred HHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchh
Q 040501 69 GIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCD 146 (228)
Q Consensus 69 ~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~D 146 (228)
|++.|++|||+. |++|+||||+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.++|
T Consensus 131 ~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 207 (291)
T cd05094 131 QIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD 207 (291)
T ss_pred HHHHHHHHHHhC---CeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhh
Confidence 999999999999 9999999999999999999999999998765432211 12234567899999998888999999
Q ss_pred hhhHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 147 VYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 147 iwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
|||||+++|+|++ |..||..... ................ ...+..+.+++.+||+.+|.+|||+.++++.
T Consensus 208 i~slG~il~el~t~g~~p~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~ 278 (291)
T cd05094 208 VWSFGVILWEIFTYGKQPWFQLSN------TEVIECITQGRVLERP---RVCPKEVYDIMLGCWQREPQQRLNIKEIYKI 278 (291)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHhCCCCCCCC---ccCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 9999999999998 9999754322 1222223222222211 2345678999999999999999999999999
Q ss_pred hh
Q 040501 226 LC 227 (228)
Q Consensus 226 l~ 227 (228)
|+
T Consensus 279 l~ 280 (291)
T cd05094 279 LH 280 (291)
T ss_pred HH
Confidence 86
No 42
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.6e-41 Score=264.32 Aligned_cols=203 Identities=23% Similarity=0.291 Sum_probs=168.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++||||+++++++......|++|||+.+++|.+++.... .++...+..++.|++.||+|||+.
T Consensus 63 ~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~-- 137 (329)
T PTZ00263 63 QHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSK-- 137 (329)
T ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 457899999999999999999999999999999999999999999987543 378888999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++||||||+||+++.++.++|+|||++....... ....|++.|+|||++.+..++.++|||||||++|+|++|..
T Consensus 138 -~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~ 213 (329)
T PTZ00263 138 -DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT---FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYP 213 (329)
T ss_pred -CeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc---ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCC
Confidence 99999999999999999999999999987654322 23568899999999998889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCC-----HHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPN-----MQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----~~~il~ 224 (228)
||.... .......+....... + ...+..+.++|.+||+.||.+||+ ++++++
T Consensus 214 pf~~~~------~~~~~~~i~~~~~~~-p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 214 PFFDDT------PFRIYEKILAGRLKF-P---NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred CCCCCC------HHHHHHHHhcCCcCC-C---CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 985322 222333333333221 1 124456889999999999999997 566653
No 43
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2e-41 Score=258.96 Aligned_cols=210 Identities=23% Similarity=0.262 Sum_probs=168.0
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+.+|+++++.++|++|+++++.+.++...++++||+.+++|.+.+..... ..+++..+..++.|++.||.|||+.
T Consensus 46 ~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~--- 121 (285)
T cd05631 46 MALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQRE--- 121 (285)
T ss_pred HHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 567899999999999999999999999999999999999999888754322 2488999999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p 163 (228)
|++||||||+||+++.++.++|+|||++....... ......|+..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 122 ~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~p 200 (285)
T cd05631 122 RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSP 200 (285)
T ss_pred CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCC
Confidence 99999999999999999999999999987653222 22345688999999999988999999999999999999999999
Q ss_pred ccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCC-----HHHHHH
Q 040501 164 RDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPN-----MQTICQ 224 (228)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----~~~il~ 224 (228)
|........ ............. . .....+..+.+++.+||+.||.+||+ ++++++
T Consensus 201 f~~~~~~~~--~~~~~~~~~~~~~-~---~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 201 FRKRKERVK--REEVDRRVKEDQE-E---YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred CCCCCcchh--HHHHHHHhhcccc-c---CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 864322110 1111111111111 1 11245667899999999999999997 677765
No 44
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.2e-41 Score=254.88 Aligned_cols=217 Identities=21% Similarity=0.340 Sum_probs=175.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT-SAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
..+.+|+++++.++||||+++++++......++++||+.+++|.+++.... ....++...++.++.|++.|+.|||+.
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~- 125 (267)
T cd08228 47 QDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR- 125 (267)
T ss_pred HHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC-
Confidence 467889999999999999999999999999999999999999998886422 223478899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++|+|||.+..............+++.|+|||.+.+..++.++|+||+|+++|+|++|.
T Consensus 126 --~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~ 203 (267)
T cd08228 126 --RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 203 (267)
T ss_pred --CeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999887654333333456788999999998888899999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
.||.... .........+.....++.. ....+..+.+++.+||..+|.+|||+.++++.|+.
T Consensus 204 ~p~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~ 264 (267)
T cd08228 204 SPFYGDK----MNLFSLCQKIEQCDYPPLP--TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ 264 (267)
T ss_pred CCCcccc----ccHHHHHHHHhcCCCCCCC--hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence 9975321 1112222222222222221 12455678999999999999999999999999863
No 45
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.2e-42 Score=266.53 Aligned_cols=203 Identities=25% Similarity=0.304 Sum_probs=168.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+..|++++++++||||+++++++......|+||||+.+++|.+++.... .+++..+..++.|++.||.|||+.
T Consensus 43 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~-- 117 (318)
T cd05582 43 VRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL-- 117 (318)
T ss_pred HHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 456789999999999999999999999999999999999999999886543 388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||||+||+++.++.++|+|||++..............|++.|+|||.+.+..++.++||||||+++|+|++|..
T Consensus 118 -~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~ 196 (318)
T cd05582 118 -GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSL 196 (318)
T ss_pred -CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCC
Confidence 9999999999999999999999999998765443333344678899999999988888999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQT 221 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 221 (228)
||.... .......+....... ....+..+.+++.+||+.||.+|||+.+
T Consensus 197 p~~~~~------~~~~~~~i~~~~~~~----p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 197 PFQGKD------RKETMTMILKAKLGM----PQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCC------HHHHHHHHHcCCCCC----CCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 985322 222333333322211 1234567889999999999999999655
No 46
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.1e-41 Score=261.17 Aligned_cols=203 Identities=26% Similarity=0.335 Sum_probs=168.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++||||+++++++.+....|+||||+.+++|.+++.... .++...+..++.|++.||+|||+.
T Consensus 46 ~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~-- 120 (291)
T cd05612 46 QHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSK-- 120 (291)
T ss_pred HHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 457789999999999999999999999999999999999999999987543 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++||||||+||+++.++.++|+|||++...... .....|++.|+|||.+.+..++.++||||||+++|+|++|..
T Consensus 121 -~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~ 196 (291)
T cd05612 121 -EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYP 196 (291)
T ss_pred -CeeecCCCHHHeEECCCCCEEEEecCcchhccCC---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999998765432 223468899999999998889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCC-----HHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPN-----MQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----~~~il~ 224 (228)
||.... .......+........ ...+..+.++|++||+.||.+||+ ++++++
T Consensus 197 pf~~~~------~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 197 PFFDDN------PFGIYEKILAGKLEFP----RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred CCCCCC------HHHHHHHHHhCCcCCC----ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 986432 2223333333322111 123557889999999999999995 777764
No 47
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-41 Score=261.91 Aligned_cols=209 Identities=26% Similarity=0.345 Sum_probs=187.1
Q ss_pred hHHHHHHHHHHhccC-CCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 2 KKEFLREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
+..+.+|+++|+++. ||||+.+.+.|+.....++|||++.||.|.+.+... .+++..+..++.|++.+++|||+.
T Consensus 79 ~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~ 154 (382)
T KOG0032|consen 79 REDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSL 154 (382)
T ss_pred HHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 468899999999997 999999999999999999999999999999999876 289999999999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCC----CceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHH
Q 040501 81 CIPPIVHRDISSKNVLLDLE----YEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~----~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 156 (228)
|++|||+||+|+++... +.++++|||++..... ........|++.|+|||++....++..+|+||+|+++|.
T Consensus 155 ---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yi 230 (382)
T KOG0032|consen 155 ---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYI 230 (382)
T ss_pred ---CceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHH
Confidence 99999999999999543 4799999999998876 555677899999999999999999999999999999999
Q ss_pred HHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 157 VIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|++|.+||.... .......+...........+..++....++|+.||..||..|+|+.++++
T Consensus 231 LL~G~~PF~~~~------~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 231 LLSGVPPFWGET------EFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred HhhCCCCCcCCC------hhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 999999975432 33344477777777777778888999999999999999999999999986
No 48
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=5e-41 Score=254.47 Aligned_cols=217 Identities=21% Similarity=0.362 Sum_probs=176.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND-TSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+.+|+.+++.++|+||+++++++..+...++++|++.+++|.+++... .....+++.+++.++.|++.|+.|||+.
T Consensus 47 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~- 125 (267)
T cd08229 47 ADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR- 125 (267)
T ss_pred HHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 56789999999999999999999999999999999999999999988642 2234488999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++++|||.+..............++..|+|||.+.+..++.++|+||||+++|+|++|.
T Consensus 126 --~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~ 203 (267)
T cd08229 126 --RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 203 (267)
T ss_pred --CeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCC
Confidence 999999999999999999999999998876544333333456788999999998888899999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
.||..... ..............++.. ....+..+.+++.+||..||.+|||+.+|++.+++
T Consensus 204 ~p~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~ 264 (267)
T cd08229 204 SPFYGDKM----NLYSLCKKIEQCDYPPLP--SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKR 264 (267)
T ss_pred CCcccccc----hHHHHhhhhhcCCCCCCC--cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence 99853221 111222222222222111 12456689999999999999999999999998864
No 49
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.9e-41 Score=258.42 Aligned_cols=216 Identities=21% Similarity=0.288 Sum_probs=165.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.+|++++++++|+||+++++++......++|||++.+ +|.+++..... .++...+..++.|++.||+|||+.
T Consensus 48 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~-- 122 (288)
T cd07871 48 CTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGN--LMSMHNVKIFMFQLLRGLSYCHKR-- 122 (288)
T ss_pred hhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 3567899999999999999999999998999999999975 88888765432 378889999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++||||||+||+++.++.+||+|||++..............+++.|+|||.+.+ ..++.++|+||+|+++|+|++|.
T Consensus 123 -~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~ 201 (288)
T cd07871 123 -KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGR 201 (288)
T ss_pred -CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999998765433333344567889999998865 45788999999999999999999
Q ss_pred CCccccccccCC---------Cchh---------hhhhhcCCCC--CCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHH
Q 040501 162 HPRDFLSNVSSS---------NPNI---------LVNEMLDPRL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQT 221 (228)
Q Consensus 162 ~p~~~~~~~~~~---------~~~~---------~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 221 (228)
.||......... .... .......+.. .+........+.+..+++++||..||.+|||+++
T Consensus 202 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~ 281 (288)
T cd07871 202 PMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEA 281 (288)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHH
Confidence 998643211000 0000 0000000000 0000111234567889999999999999999999
Q ss_pred HHH
Q 040501 222 ICQ 224 (228)
Q Consensus 222 il~ 224 (228)
+++
T Consensus 282 ~l~ 284 (288)
T cd07871 282 ALR 284 (288)
T ss_pred Hhc
Confidence 985
No 50
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=7.1e-41 Score=256.32 Aligned_cols=214 Identities=29% Similarity=0.490 Sum_probs=173.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCC----------CCCCCCHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT----------SAEELGWSRRINVIKGIAH 72 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----------~~~~~~~~~~~~~~~~l~~ 72 (228)
+.+.+|++++++++|+||+++++++......++++||+.+++|.+++.... ....+++.+++.++.|++.
T Consensus 52 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~ 131 (288)
T cd05093 52 KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAA 131 (288)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999999999999986432 1234889999999999999
Q ss_pred HHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhH
Q 040501 73 ALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSF 150 (228)
Q Consensus 73 ~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diwsl 150 (228)
||+|||+. |++||||||+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.++|+|||
T Consensus 132 aL~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwsl 208 (288)
T cd05093 132 GMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSL 208 (288)
T ss_pred HHHHHHhC---CeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHH
Confidence 99999999 9999999999999999999999999998765432211 122334678999999988889999999999
Q ss_pred HHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 151 GVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 151 G~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|+++|+|++ |..||.... .......+......... ...+.++.+++.+||+.||.+|||+.++++.|++
T Consensus 209 G~il~~l~t~g~~p~~~~~------~~~~~~~i~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~ 278 (288)
T cd05093 209 GVVLWEIFTYGKQPWYQLS------NNEVIECITQGRVLQRP---RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQN 278 (288)
T ss_pred HHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCCcCCCC---CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 999999998 899975332 12222333332222211 2345679999999999999999999999988863
No 51
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.2e-41 Score=259.02 Aligned_cols=216 Identities=24% Similarity=0.339 Sum_probs=166.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+||+++++++..+...|+||||+.++++..+.... ..+++..+..++.|++.||.|||+.
T Consensus 45 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~-- 119 (287)
T cd07848 45 ETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMP---NGVPPEKVRSYIYQLIKAIHWCHKN-- 119 (287)
T ss_pred hhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 56789999999999999999999999999999999999987776654332 2388899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCC-CceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS-NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||||+||+++.++.++|+|||++........ ......+++.|+|||++.+..++.++|+||+|+++|+|++|+
T Consensus 120 -~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~ 198 (287)
T cd07848 120 -DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQ 198 (287)
T ss_pred -CeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCC
Confidence 999999999999999999999999999887543222 223356788999999998888999999999999999999999
Q ss_pred CCccccccccCCC---------chhhhhhh-cCC-----CCCCC-------chhhhhhHHHHHHHHHHhhccCCCCCCCH
Q 040501 162 HPRDFLSNVSSSN---------PNILVNEM-LDP-----RLPPL-------SVDIRGKVISIMEVAFLCLDNNPESRPNM 219 (228)
Q Consensus 162 ~p~~~~~~~~~~~---------~~~~~~~~-~~~-----~~~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 219 (228)
+||+......... +....... ..+ ..+.. .......+.++.+++++||+.||++|||+
T Consensus 199 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~ 278 (287)
T cd07848 199 PLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLT 278 (287)
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCH
Confidence 9986432211000 00000000 000 00000 00011245679999999999999999999
Q ss_pred HHHHH
Q 040501 220 QTICQ 224 (228)
Q Consensus 220 ~~il~ 224 (228)
+++++
T Consensus 279 ~~~l~ 283 (287)
T cd07848 279 EQCLN 283 (287)
T ss_pred HHHhc
Confidence 99885
No 52
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.3e-40 Score=250.19 Aligned_cols=212 Identities=25% Similarity=0.389 Sum_probs=169.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.+|++++++++|+||+++++++......++||||+.+++|.+++.... ..+++..++.++.|++.||.|||+.
T Consensus 38 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~-- 113 (252)
T cd05084 38 AKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG--PRLKVKELIQMVENAAAGMEYLESK-- 113 (252)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 468899999999999999999999999999999999999999999987543 2378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc--eecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW--TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
|++|+||+|+||+++.++.++|+|||.+.......... .....+..|+|||.+.+..++.++|+||||+++|++++
T Consensus 114 -~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~ 192 (252)
T cd05084 114 -HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSL 192 (252)
T ss_pred -CccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999987544221111 11123457999999988889999999999999999997
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|..||..... ............... ...++..+.+++.+||+.+|.+|||+.++++.|++
T Consensus 193 ~~~p~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 193 GAVPYANLSN------QQTREAIEQGVRLPC---PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred CCCCccccCH------HHHHHHHHcCCCCCC---cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 8888753321 111111111111111 12345678999999999999999999999999874
No 53
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=6.8e-41 Score=252.13 Aligned_cols=210 Identities=27% Similarity=0.425 Sum_probs=175.8
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++.+.+|+++++.++|+||+++++++......|+++||+++++|.+++.... ...++..+++.++.+++.||.|||+.
T Consensus 43 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~- 120 (256)
T cd08529 43 REEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSK- 120 (256)
T ss_pred HHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 4678899999999999999999999999999999999999999999987642 23488899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++|+|||.+..............+++.|+|||+..+..++.++|+||||+++|+|++|.
T Consensus 121 --~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 198 (256)
T cd08529 121 --KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGK 198 (256)
T ss_pred --CcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCC
Confidence 999999999999999999999999999887654443344456788999999998888899999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.||.... .............+.... .++.++.+++.+||+.+|++||++.++++
T Consensus 199 ~p~~~~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 199 HPFDANN------QGALILKIIRGVFPPVSQ---MYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred CCCCCCC------HHHHHHHHHcCCCCCCcc---ccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 9986433 222333333333332221 45567899999999999999999999986
No 54
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.1e-40 Score=252.11 Aligned_cols=213 Identities=26% Similarity=0.417 Sum_probs=171.9
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++++..+...+++|||+++++|.+++..... ..++...++.++.|++.+|++||+.
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~-- 123 (263)
T cd05052 47 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKK-- 123 (263)
T ss_pred HHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 5688999999999999999999999999999999999999999999865432 3478899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc-eecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-C
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW-TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-G 160 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g 160 (228)
|++|+||||+||+++.++.++|+|||.+.......... .....+..|+|||.+.+..++.++||||||+++|+|++ |
T Consensus 124 -~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g 202 (263)
T cd05052 124 -NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 202 (263)
T ss_pred -CEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999987654322211 11223567999999988889999999999999999998 9
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
..||+... ............... .....+.++.+++.+||+.||.+|||+.++++.|+.
T Consensus 203 ~~p~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 203 MSPYPGID------LSQVYELLEKGYRME---RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred CCCCCCCC------HHHHHHHHHCCCCCC---CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 99975322 112222221111111 112456689999999999999999999999999863
No 55
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=4.2e-41 Score=256.56 Aligned_cols=213 Identities=23% Similarity=0.273 Sum_probs=170.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND-TSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+..|+++++.++|+||+++.+.+......|+||||+++++|.+.+... .....+++..+..++.|++.||.|||+.
T Consensus 38 ~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~- 116 (280)
T cd05608 38 EGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR- 116 (280)
T ss_pred HHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 35678999999999999999999999999999999999999998877542 2234588999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||||+||+++.++.++|+|||.+..............+++.|+|||.+.+..++.++|+||+|+++|+|++|.
T Consensus 117 --~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~ 194 (280)
T cd05608 117 --RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAAR 194 (280)
T ss_pred --CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999876554433334456888999999999988999999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP-----NMQTICQ 224 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~il~ 224 (228)
.||....... ............... .....+..+.+++.+||+.||.+|| |++++++
T Consensus 195 ~pf~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 195 GPFRARGEKV--ENKELKQRILNDSVT----YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CCCCCCCcch--hHHHHHHhhcccCCC----CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 9986432111 111112222221111 1124566789999999999999999 6677764
No 56
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.3e-40 Score=250.72 Aligned_cols=212 Identities=26% Similarity=0.484 Sum_probs=171.0
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+.+|++++++++||||+++++++......+++|||+.+++|.+++..... .+++..++.++.|++.||.|||+.
T Consensus 43 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~- 119 (256)
T cd05114 43 EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLERN- 119 (256)
T ss_pred HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 35788999999999999999999999999999999999999999999875432 378899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
|++|+||+|+||+++.++.++++|||.+......... .....++..|+|||.+.+..++.++|+||+|+++|++++
T Consensus 120 --~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~ 197 (256)
T cd05114 120 --SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTE 197 (256)
T ss_pred --CccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcC
Confidence 9999999999999999999999999988765322211 112234567999999988889999999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|+.||.... .......+........+ ...+..+.+++.+||+.+|.+|||++++++.|.
T Consensus 198 g~~p~~~~~------~~~~~~~i~~~~~~~~~---~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 198 GKMPFEKKS------NYEVVEMISRGFRLYRP---KLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred CCCCCCCCC------HHHHHHHHHCCCCCCCC---CCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 899975432 22222233222211111 123456899999999999999999999999874
No 57
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3.5e-41 Score=240.52 Aligned_cols=216 Identities=22% Similarity=0.303 Sum_probs=172.9
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
...+|++.|+.++|+||+.+++.|...+.+.+|+||++ .+|...++..... ++...+..++.+++.|++|||+.
T Consensus 47 talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~-tdLe~vIkd~~i~--l~pa~iK~y~~m~LkGl~y~H~~--- 120 (318)
T KOG0659|consen 47 TALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP-TDLEVVIKDKNII--LSPADIKSYMLMTLKGLAYCHSK--- 120 (318)
T ss_pred HHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEecc-ccHHHHhcccccc--cCHHHHHHHHHHHHHHHHHHHhh---
Confidence 46899999999999999999999999999999999996 4899999865543 88899999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHhCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
.|.||||||.|++++.+|.+||.|||+++..+...........|..|+|||.+.|. .|+...|+||.||++.|++-|.+
T Consensus 121 ~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P 200 (318)
T KOG0659|consen 121 WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVP 200 (318)
T ss_pred hhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCC
Confidence 99999999999999999999999999999988777766666788999999988876 58999999999999999998888
Q ss_pred CccccccccCCCch------------------hhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPN------------------ILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
-|+..+..+..... .....+..-..+.........+.+..+++.+||..||.+|+|+.++++
T Consensus 201 ~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~ 280 (318)
T KOG0659|consen 201 FFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK 280 (318)
T ss_pred CCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence 77543322110000 000000000011111122344556789999999999999999999986
Q ss_pred H
Q 040501 225 L 225 (228)
Q Consensus 225 ~ 225 (228)
.
T Consensus 281 ~ 281 (318)
T KOG0659|consen 281 H 281 (318)
T ss_pred c
Confidence 3
No 58
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.9e-41 Score=262.15 Aligned_cols=207 Identities=24% Similarity=0.362 Sum_probs=165.3
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+.+|..+++.+ +||||++++++|......|+||||+++++|.+++.... .+++..+..++.|++.||.|||+.
T Consensus 40 ~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH~~- 115 (329)
T cd05588 40 DWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQR---KLPEEHARFYSAEISLALNFLHER- 115 (329)
T ss_pred HHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 3467899999998 79999999999999999999999999999998886543 389999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|+||||+++|++++|.
T Consensus 116 --~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~ 193 (329)
T cd05588 116 --GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 193 (329)
T ss_pred --CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCC
Confidence 999999999999999999999999999875332233334457899999999999988999999999999999999999
Q ss_pred CCccccccccC--CCc-hhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCH
Q 040501 162 HPRDFLSNVSS--SNP-NILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM 219 (228)
Q Consensus 162 ~p~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 219 (228)
.||........ ... ......+...... .+ ...+..+.+++++||+.||.+|+|+
T Consensus 194 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p---~~~~~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 194 SPFDIVGMSDNPDQNTEDYLFQVILEKQIR-IP---RSLSVKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred CCcccccccccccccchHHHHHHHHcCCCC-CC---CCCCHHHHHHHHHHhccCHHHcCCC
Confidence 99864322211 111 1112222222211 11 2345578899999999999999983
No 59
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.6e-40 Score=251.58 Aligned_cols=218 Identities=22% Similarity=0.354 Sum_probs=177.0
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT-SAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
++.+.+|++++++++|++++++++.+......+++|||+++++|.+++.... ....++..+++.++.+++.|+.+||+.
T Consensus 46 ~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 125 (267)
T cd08224 46 RQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK 125 (267)
T ss_pred HHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 4678899999999999999999999999999999999999999999886532 233478999999999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhC
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g 160 (228)
|++|+||+|+||+++.++.++++|||.+..............++..|+|||.+.+..++.++|+||||+++|++++|
T Consensus 126 ---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g 202 (267)
T cd08224 126 ---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL 202 (267)
T ss_pred ---CEecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHC
Confidence 99999999999999999999999999987654433333345678889999999888899999999999999999999
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
..||.... ...............++.. ....+..+.++|.+||..+|.+|||+.++++.|++
T Consensus 203 ~~p~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~ 264 (267)
T cd08224 203 QSPFYGDK----MNLYSLCKKIEKCDYPPLP--ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKE 264 (267)
T ss_pred CCCcccCC----ccHHHHHhhhhcCCCCCCC--hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHH
Confidence 99975322 1111222222222222221 12456678999999999999999999999999863
No 60
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.9e-41 Score=262.87 Aligned_cols=203 Identities=22% Similarity=0.302 Sum_probs=169.0
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++||||+++++++......|+||||+.+++|.+++.... .+++..+..++.|++.||.|||+.
T Consensus 76 ~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~-- 150 (340)
T PTZ00426 76 DHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSL-- 150 (340)
T ss_pred HHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 457789999999999999999999999999999999999999999987653 388899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++||||||+||+++.++.++|+|||++...... .....|++.|+|||++.+..++.++|+|||||++|+|++|..
T Consensus 151 -~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~ 226 (340)
T PTZ00426 151 -NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCP 226 (340)
T ss_pred -CeEccCCCHHHEEECCCCCEEEecCCCCeecCCC---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCC
Confidence 9999999999999999999999999998765422 234578899999999988889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP-----NMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~il~ 224 (228)
||.... .......+....... + ...+..+.++|++||+.||.+|+ |++++++
T Consensus 227 Pf~~~~------~~~~~~~i~~~~~~~-p---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 227 PFYANE------PLLIYQKILEGIIYF-P---KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred CCCCCC------HHHHHHHHhcCCCCC-C---CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 986432 222333333332211 1 12345678999999999999995 7888765
No 61
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-40 Score=264.21 Aligned_cols=216 Identities=20% Similarity=0.323 Sum_probs=165.9
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++.+.+|++++++++||||++++++|......++++|++. ++|..++.... .+++..++.++.|++.||.|||+.
T Consensus 127 ~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~- 201 (391)
T PHA03212 127 RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLHEN- 201 (391)
T ss_pred hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 3567899999999999999999999999999999999985 57777775443 378899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCC-CCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS-SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g 160 (228)
||+||||||+||+++.++.++|+|||++....... .......|++.|+|||++.+..++.++|||||||++|+|++|
T Consensus 202 --~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg 279 (391)
T PHA03212 202 --RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATC 279 (391)
T ss_pred --CcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999986533221 223345789999999999988899999999999999999999
Q ss_pred CCCccccccccCC-Cchhhhhhh--------------------------c---C--CCCCCCchhhhhhHHHHHHHHHHh
Q 040501 161 KHPRDFLSNVSSS-NPNILVNEM--------------------------L---D--PRLPPLSVDIRGKVISIMEVAFLC 208 (228)
Q Consensus 161 ~~p~~~~~~~~~~-~~~~~~~~~--------------------------~---~--~~~~~~~~~~~~~~~~~~~li~~~ 208 (228)
..||......... ........+ . . +...+........+.++.++|.+|
T Consensus 280 ~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~m 359 (391)
T PHA03212 280 HDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKM 359 (391)
T ss_pred CCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHH
Confidence 9876422111100 000000000 0 0 000001111224566789999999
Q ss_pred hccCCCCCCCHHHHHH
Q 040501 209 LDNNPESRPNMQTICQ 224 (228)
Q Consensus 209 l~~~p~~Rpt~~~il~ 224 (228)
|+.||.+|||++++++
T Consensus 360 L~~dP~~Rpta~elL~ 375 (391)
T PHA03212 360 LAFDAHHRPSAEALLD 375 (391)
T ss_pred hcCChhhCCCHHHHhc
Confidence 9999999999999985
No 62
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.3e-40 Score=251.33 Aligned_cols=214 Identities=24% Similarity=0.477 Sum_probs=175.2
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
...+.+|+.+++.++|+||+++++++......+++|||+++++|.+++.... ...+++.+++.++.|++.|+.|||+.
T Consensus 46 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~- 123 (261)
T cd05148 46 QQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQ- 123 (261)
T ss_pred HHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 3568899999999999999999999999999999999999999999997643 23478999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-C
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-G 160 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g 160 (228)
|++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+.+..++.++|+||||+++|++++ |
T Consensus 124 --~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g 201 (261)
T cd05148 124 --NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYG 201 (261)
T ss_pred --CeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999998765433222223345678999999988889999999999999999998 8
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
..||.... ..............+. ....+.++.+++.+||+.||.+|||++++++.|+.
T Consensus 202 ~~p~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 202 QVPYPGMN------NHEVYDQITAGYRMPC---PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCcCC------HHHHHHHHHhCCcCCC---CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 99985432 1222222222211111 13455678999999999999999999999999874
No 63
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=5.8e-41 Score=255.42 Aligned_cols=212 Identities=24% Similarity=0.279 Sum_probs=169.7
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+..|++++++++||||+++++.+..+...|+||||+.+++|.+++..... ..+++..+..++.|++.|++|||+.
T Consensus 39 ~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~--- 114 (277)
T cd05607 39 MALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGE-RGLEMERVIHYSAQITCGILHLHSM--- 114 (277)
T ss_pred HHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 456799999999999999999999999999999999999999988765432 3378899999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p 163 (228)
|++|+||||+||+++.++.++|+|||++....... ......++..|+|||++.+..++.++|+||+|+++|+|++|..|
T Consensus 115 ~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p 193 (277)
T cd05607 115 DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTP 193 (277)
T ss_pred CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999987654322 22335678899999999888899999999999999999999999
Q ss_pred ccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 164 RDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
|...... ................. ....++.++.+++.+||+.||.+||+++++++.
T Consensus 194 ~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 194 FKDHKEK--VAKEELKRRTLEDEVKF---EHQNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred CCCCcch--hhHHHHHHHhhcccccc---ccccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 8642211 11122222222222211 122456678999999999999999999776543
No 64
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.6e-41 Score=264.24 Aligned_cols=215 Identities=25% Similarity=0.406 Sum_probs=163.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec-----CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA-----RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYL 77 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 77 (228)
.++.+|+++++.++||||+++++++... ...|+||||+. ++|.+++.... .+++..+..++.|++.||.||
T Consensus 44 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~L 119 (338)
T cd07859 44 TRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYI 119 (338)
T ss_pred HHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHH
Confidence 4578999999999999999999988533 35899999995 58888876543 388999999999999999999
Q ss_pred hhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCC---CceecccccceeCCccccc--CCcccchhhhhHHH
Q 040501 78 HHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS---NWTEFAGTYGYVAPELAYT--MKVTAKCDVYSFGV 152 (228)
Q Consensus 78 h~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~ 152 (228)
|+. |++||||||+||+++.++.+||+|||++........ ......+++.|+|||++.+ ..++.++|||||||
T Consensus 120 H~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGv 196 (338)
T cd07859 120 HTA---NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 196 (338)
T ss_pred HHC---CeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHH
Confidence 999 999999999999999999999999999875432221 1234568899999998865 56888999999999
Q ss_pred HHHHHHhCCCCccccccccC---------CCch------------hhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhcc
Q 040501 153 LALEVIKGKHPRDFLSNVSS---------SNPN------------ILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDN 211 (228)
Q Consensus 153 ~l~~~~~g~~p~~~~~~~~~---------~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 211 (228)
++|+|++|+.||........ .... ...................+.+..+.+++.+||+.
T Consensus 197 vl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 276 (338)
T cd07859 197 IFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAF 276 (338)
T ss_pred HHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCc
Confidence 99999999999864321110 0000 00111111111111122234556788999999999
Q ss_pred CCCCCCCHHHHHH
Q 040501 212 NPESRPNMQTICQ 224 (228)
Q Consensus 212 ~p~~Rpt~~~il~ 224 (228)
||.+|||++++++
T Consensus 277 ~P~~Rpt~~e~l~ 289 (338)
T cd07859 277 DPKDRPTAEEALA 289 (338)
T ss_pred CcccCCCHHHHhc
Confidence 9999999999985
No 65
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.9e-41 Score=262.69 Aligned_cols=207 Identities=20% Similarity=0.240 Sum_probs=169.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++||||+++++++......|+||||+.+++|.+++.... .+++..+..++.|++.||.|||+.
T Consensus 46 ~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~-- 120 (333)
T cd05600 46 RHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHEL-- 120 (333)
T ss_pred HHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 457789999999999999999999999999999999999999999997543 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++||||||+||+++.++.++|+|||++..... ......|++.|+|||++.+..++.++|||||||++|+|++|..
T Consensus 121 -~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~ 196 (333)
T cd05600 121 -GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFP 196 (333)
T ss_pred -CccccCCCHHHEEECCCCCEEEEeCcCCccccc---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCC
Confidence 999999999999999999999999999876543 2234568899999999998899999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcC----CCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLD----PRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||..... ......+.. ...+.........+.++.+++.+||..+|.+|||+.++++
T Consensus 197 pf~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 197 PFSGSTP------NETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred CCCCCCH------HHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence 9864322 111111111 0111111111245667899999999999999999999985
No 66
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.1e-41 Score=263.36 Aligned_cols=206 Identities=25% Similarity=0.292 Sum_probs=168.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-CC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH-DC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~ 81 (228)
..+.+|+++++.++||||+++.+.+......|+||||+.+++|..++.... .+++..+..++.|++.||.|||+ .
T Consensus 40 ~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~- 115 (325)
T cd05594 40 AHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK- 115 (325)
T ss_pred HHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhcC-
Confidence 356789999999999999999999999999999999999999998886543 38899999999999999999997 7
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|||||||++|+|++|.
T Consensus 116 --~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~ 193 (325)
T cd05594 116 --NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 193 (325)
T ss_pred --CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCC
Confidence 999999999999999999999999999875433333334456899999999998888999999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP-----NMQTICQ 224 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~il~ 224 (228)
.||.... .......+....... ....+.++.+++.+||+.||++|+ ++.++++
T Consensus 194 ~Pf~~~~------~~~~~~~i~~~~~~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 194 LPFYNQD------HEKLFELILMEEIRF----PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CCCCCCC------HHHHHHHHhcCCCCC----CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 9985322 112222222221111 123456789999999999999997 8888874
No 67
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=6.9e-41 Score=264.79 Aligned_cols=216 Identities=25% Similarity=0.410 Sum_probs=170.1
Q ss_pred hHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC--------------------------
Q 040501 2 KKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-------------------------- 54 (228)
Q Consensus 2 ~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-------------------------- 54 (228)
++.+.+|+++++.+ +||||++++++|......++||||+++|+|.+++.....
T Consensus 82 ~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (375)
T cd05104 82 REALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMS 161 (375)
T ss_pred HHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhccc
Confidence 35688999999999 899999999999999999999999999999998864221
Q ss_pred ----------------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeec
Q 040501 55 ----------------------------------------------AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHR 88 (228)
Q Consensus 55 ----------------------------------------------~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~ 88 (228)
...+++..++.++.|++.||+|||+. |++||
T Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~ 238 (375)
T cd05104 162 CDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHR 238 (375)
T ss_pred chhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---Ceecc
Confidence 12367888899999999999999999 99999
Q ss_pred CCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-CCCCcc
Q 040501 89 DISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRD 165 (228)
Q Consensus 89 di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g~~p~~ 165 (228)
||||+||+++.++.++|+|||++......... .....++..|+|||.+.+..++.++||||||+++|+|++ |..||.
T Consensus 239 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~ 318 (375)
T cd05104 239 DLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYP 318 (375)
T ss_pred CCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999998765433221 112234567999999998889999999999999999997 888875
Q ss_pred ccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 166 FLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
..... ............... ....+.++.+++.+||+.||.+|||+.++++.|++
T Consensus 319 ~~~~~------~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 319 GMPVD------SKFYKMIKEGYRMLS--PECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CCCch------HHHHHHHHhCccCCC--CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 43211 111111111111100 01234578999999999999999999999999975
No 68
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.5e-41 Score=264.21 Aligned_cols=207 Identities=24% Similarity=0.371 Sum_probs=162.4
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++.+.+|+++++.++|+||+++++++......|+||||+.+++|.+.. ......+..++.|++.||.|||+.
T Consensus 116 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~- 187 (353)
T PLN00034 116 RRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRR- 187 (353)
T ss_pred HHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 356889999999999999999999999999999999999999886532 245677888999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-----CcccchhhhhHHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-----KVTAKCDVYSFGVLALE 156 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~DiwslG~~l~~ 156 (228)
|++||||||+||+++.++.+||+|||++..............|+..|+|||.+... ..+.++|||||||++|+
T Consensus 188 --~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~e 265 (353)
T PLN00034 188 --HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILE 265 (353)
T ss_pred --CEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHH
Confidence 99999999999999999999999999988765433333445788999999987432 23568999999999999
Q ss_pred HHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 157 VIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|++|..||..... .........+.....+. .....+.++.++|.+||..||.+|||+.++++
T Consensus 266 l~~g~~pf~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 266 FYLGRFPFGVGRQ---GDWASLMCAICMSQPPE---APATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred HHhCCCCCCCCCC---ccHHHHHHHHhccCCCC---CCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 9999999862211 11111111111111111 11245567899999999999999999999986
No 69
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.9e-41 Score=265.47 Aligned_cols=215 Identities=26% Similarity=0.419 Sum_probs=169.6
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC---------------------------
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS--------------------------- 54 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--------------------------- 54 (228)
+.+.+|+++++.+ +|+||+++++.|......++||||+.+++|.+++.....
T Consensus 86 ~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (374)
T cd05106 86 EALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKK 165 (374)
T ss_pred HHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcc
Confidence 4678999999999 899999999999999999999999999999998854210
Q ss_pred ----------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeecCCCCCc
Q 040501 55 ----------------------------------------AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKN 94 (228)
Q Consensus 55 ----------------------------------------~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~di~p~n 94 (228)
...+++..++.++.|++.||.|||+. |++||||||+|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~N 242 (374)
T cd05106 166 YIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARN 242 (374)
T ss_pred cccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchhe
Confidence 12367888999999999999999999 99999999999
Q ss_pred eEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-CCCCcccccccc
Q 040501 95 VLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVS 171 (228)
Q Consensus 95 il~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g~~p~~~~~~~~ 171 (228)
|+++.++.++|+|||++......... .....++..|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 243 il~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~- 321 (374)
T cd05106 243 VLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN- 321 (374)
T ss_pred EEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc-
Confidence 99999999999999998765432211 112234567999999988889999999999999999997 99998643211
Q ss_pred CCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 172 SSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
............... ....+.++.+++.+||+.||.+|||+.++++.|++
T Consensus 322 -----~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~ 371 (374)
T cd05106 322 -----SKFYKMVKRGYQMSR--PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQR 371 (374)
T ss_pred -----HHHHHHHHcccCccC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111111111111100 01235678999999999999999999999999874
No 70
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.6e-40 Score=250.23 Aligned_cols=212 Identities=26% Similarity=0.476 Sum_probs=171.8
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+.+|+.++++++||||+++++++......+++|||+.+++|.+++..... .+++.+++.++.|++.||.|||+.
T Consensus 43 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~- 119 (256)
T cd05113 43 EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESK- 119 (256)
T ss_pred HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 35688999999999999999999999988899999999999999999875433 388999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
|++|+||+|+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.++|+||||+++|+|++
T Consensus 120 --~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~ 197 (256)
T cd05113 120 --QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSL 197 (256)
T ss_pred --CeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999988765433221 112234567999999988888999999999999999998
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|..||..... ......+......... ...+..+.+++.+||+.+|.+|||+.++++.|+
T Consensus 198 g~~p~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 198 GKMPYERFNN------SETVEKVSQGLRLYRP---HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCcCcCCH------HHHHHHHhcCCCCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 9999754322 1222223222222111 123567899999999999999999999999874
No 71
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-41 Score=265.09 Aligned_cols=207 Identities=28% Similarity=0.456 Sum_probs=174.1
Q ss_pred HHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCe
Q 040501 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPI 85 (228)
Q Consensus 6 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i 85 (228)
..+|+-|++|+|+||+++.++|.....+|||||||+.|-|...++.... +.......|..+|+.|+.|||.. .|
T Consensus 160 ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~---itp~llv~Wsk~IA~GM~YLH~h---KI 233 (904)
T KOG4721|consen 160 ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRP---ITPSLLVDWSKGIAGGMNYLHLH---KI 233 (904)
T ss_pred hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCc---cCHHHHHHHHHHhhhhhHHHHHh---hH
Confidence 3588999999999999999999999999999999999999999976543 78888999999999999999999 99
Q ss_pred eecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCcc
Q 040501 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRD 165 (228)
Q Consensus 86 ~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~ 165 (228)
+|||||.-|||++.+..+||+|||-++....- .....+.||..|||||++.....+.|+||||||++||||+||..||.
T Consensus 234 IHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYk 312 (904)
T KOG4721|consen 234 IHRDLKSPNILISYDDVVKISDFGTSKELSDK-STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYK 312 (904)
T ss_pred hhhccCCCceEeeccceEEeccccchHhhhhh-hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCcc
Confidence 99999999999999999999999988876543 33456889999999999999999999999999999999999999986
Q ss_pred ccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 166 FLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
.....- ..--+....+...+| ..++.-+.-|+++||+-.|..||++.+++.-|.
T Consensus 313 dVdssA--IIwGVGsNsL~LpvP------stcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 313 DVDSSA--IIWGVGSNSLHLPVP------STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred ccchhe--eEEeccCCcccccCc------ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 432211 011122233333333 255667889999999999999999999987653
No 72
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.6e-40 Score=253.05 Aligned_cols=214 Identities=21% Similarity=0.378 Sum_probs=171.0
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC-------CCCCCHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-------AEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~l~ 75 (228)
+.+.+|+.+++.++|+||+++++++..+...++||||+.+++|.+++..... ....++.++..++.|++.||.
T Consensus 54 ~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 133 (277)
T cd05062 54 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMA 133 (277)
T ss_pred HHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999865321 123567888999999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHH
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVL 153 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~ 153 (228)
|||+. |++|+||||+||+++.++.++++|||.+......... .....++..|+|||.+.+..++.++|+||||++
T Consensus 134 ~lH~~---~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 210 (277)
T cd05062 134 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 210 (277)
T ss_pred HHHHC---CcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHH
Confidence 99999 9999999999999999999999999998755432221 112234678999999988889999999999999
Q ss_pred HHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 154 ALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 154 l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
+|++++ |..||.... ................. ...+..+.+++.+||+.||.+|||+.++++.|++
T Consensus 211 l~el~~~~~~p~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 211 LWEIATLAEQPYQGMS------NEQVLRFVMEGGLLDKP---DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHHcCCCCCCCCCC------HHHHHHHHHcCCcCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 999998 788875332 12222222222222111 2345578999999999999999999999999875
No 73
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-41 Score=251.42 Aligned_cols=216 Identities=23% Similarity=0.361 Sum_probs=171.7
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeee-----cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTH-----ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (228)
.++..+|+++|+.++|+||+.+.+++.. -+.+|+|+|++ +.+|...++.+.. ++...+..+++|++.||+|
T Consensus 65 akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elM-etDL~~iik~~~~---L~d~H~q~f~YQiLrgLKy 140 (359)
T KOG0660|consen 65 AKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKSQQD---LTDDHAQYFLYQILRGLKY 140 (359)
T ss_pred HHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHH-hhHHHHHHHcCcc---ccHHHHHHHHHHHHHhcch
Confidence 4667899999999999999999999965 35799999999 5688888876543 7888899999999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCC--CCCceecccccceeCCcccc-cCCcccchhhhhHHHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD--SSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVL 153 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DiwslG~~ 153 (228)
+|+. |++|||+||+|++++.+..+||+|||+++..... ....+....|..|+|||.+. ...|+.+.||||+||+
T Consensus 141 iHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI 217 (359)
T KOG0660|consen 141 IHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCI 217 (359)
T ss_pred hhcc---cccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHH
Confidence 9999 9999999999999999999999999999987543 22346677899999999765 4569999999999999
Q ss_pred HHHHHhCCCCccccccccC---------CCchhhhh------------hhcCCCCCCCchhhhhhHHHHHHHHHHhhccC
Q 040501 154 ALEVIKGKHPRDFLSNVSS---------SNPNILVN------------EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNN 212 (228)
Q Consensus 154 l~~~~~g~~p~~~~~~~~~---------~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 212 (228)
+.||++|++.|++.+.... ....+... ........+.....++..+...+|+.+||..|
T Consensus 218 ~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fd 297 (359)
T KOG0660|consen 218 LAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFD 297 (359)
T ss_pred HHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccC
Confidence 9999999999976544321 11111111 11111112223334566677899999999999
Q ss_pred CCCCCCHHHHHH
Q 040501 213 PESRPNMQTICQ 224 (228)
Q Consensus 213 p~~Rpt~~~il~ 224 (228)
|.+|+|++|+++
T Consensus 298 P~kRita~eAL~ 309 (359)
T KOG0660|consen 298 PKKRITAEEALA 309 (359)
T ss_pred ccccCCHHHHhc
Confidence 999999999875
No 74
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.2e-40 Score=250.17 Aligned_cols=214 Identities=24% Similarity=0.428 Sum_probs=173.0
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+.+|+.++++++|+||+++++.+......++++|++.+++|.+++.... ...+++.+++.++.|++.||+|||+.
T Consensus 45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~- 122 (261)
T cd05072 45 VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERK- 122 (261)
T ss_pred HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 3578899999999999999999999999999999999999999999987543 23478889999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
+++|+||+|+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.++|+||||+++|+|++
T Consensus 123 --~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~ 200 (261)
T cd05072 123 --NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTY 200 (261)
T ss_pred --CeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHcc
Confidence 9999999999999999999999999999865432211 122334667999999988888999999999999999998
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|..||.... .......+......+. ....+.++.+++.+||..+|++|||++++.+.|++
T Consensus 201 g~~p~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 201 GKIPYPGMS------NSDVMSALQRGYRMPR---MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCCCCCC------HHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 999985322 1122222222211111 12355678999999999999999999999999974
No 75
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.4e-40 Score=252.42 Aligned_cols=214 Identities=27% Similarity=0.452 Sum_probs=172.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC------------CCCCCHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS------------AEELGWSRRINVIKGI 70 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~------------~~~~~~~~~~~~~~~l 70 (228)
+.+.+|++++++++|+||+++++++......++++||+.+++|.+++..... ...+++.+++.++.|+
T Consensus 52 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi 131 (280)
T cd05092 52 QDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQI 131 (280)
T ss_pred HHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHH
Confidence 5688999999999999999999999999999999999999999999875432 1237889999999999
Q ss_pred HHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhh
Q 040501 71 AHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVY 148 (228)
Q Consensus 71 ~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diw 148 (228)
+.|++|||+. |++|+||||+||++++++.++|+|||++......... .....+++.|+|||.+.+..++.++|+|
T Consensus 132 ~~al~~LH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 208 (280)
T cd05092 132 ASGMVYLASL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIW 208 (280)
T ss_pred HHHHHHHHHC---CeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHH
Confidence 9999999999 9999999999999999999999999998755322211 1122346789999999888899999999
Q ss_pred hHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 149 SFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 149 slG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|||+++|+|++ |.+||..... ............... ...++..+.+++.+||..||.+||++.++++.|+
T Consensus 209 slG~il~el~~~g~~p~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 209 SFGVVLWEIFTYGKQPWYQLSN------TEAIECITQGRELER---PRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHHHHHHcCCCCCCccCCH------HHHHHHHHcCccCCC---CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 99999999998 8999753221 122222222221111 1245567899999999999999999999999987
Q ss_pred C
Q 040501 228 K 228 (228)
Q Consensus 228 ~ 228 (228)
+
T Consensus 280 ~ 280 (280)
T cd05092 280 A 280 (280)
T ss_pred C
Confidence 4
No 76
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=7e-41 Score=259.79 Aligned_cols=201 Identities=24% Similarity=0.344 Sum_probs=165.6
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+..|..+++.+ +||||+++++++......|+||||+.+++|.+++.... .+++..+..++.|++.||.|||+.
T Consensus 40 ~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~- 115 (320)
T cd05590 40 ECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDK- 115 (320)
T ss_pred HHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 3456788888877 69999999999999999999999999999998887543 388899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||.+.+..++.++|+||||+++|+|++|.
T Consensus 116 --~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 193 (320)
T cd05590 116 --GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGH 193 (320)
T ss_pred --CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCC
Confidence 999999999999999999999999999875433333334457899999999999888999999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM 219 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 219 (228)
.||.... .......+........ ...+.++.+++++||+.||.+||++
T Consensus 194 ~Pf~~~~------~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 194 APFEAEN------EDDLFEAILNDEVVYP----TWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCCCCC------HHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHcccCHHHCCCC
Confidence 9986432 2223333333222111 1345578899999999999999998
No 77
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.1e-40 Score=256.94 Aligned_cols=210 Identities=21% Similarity=0.299 Sum_probs=162.3
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+.+|+++++.++||||+++++++......|+||||+. ++|.+++.... ..++...+..++.|++.||.|||+.
T Consensus 49 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~--- 122 (303)
T cd07869 49 TAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQR--- 122 (303)
T ss_pred hHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 56789999999999999999999999999999999996 46766665432 2378889999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHhCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||||+||+++.++.+||+|||++..............+++.|+|||++.+. .++.++||||+||++|+|++|..
T Consensus 123 ~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~ 202 (303)
T cd07869 123 YILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVA 202 (303)
T ss_pred CeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999987654333333445678899999988654 57889999999999999999999
Q ss_pred CccccccccCCCchhhhhhhc---------------------CCCCCC-Cch------hhhhhHHHHHHHHHHhhccCCC
Q 040501 163 PRDFLSNVSSSNPNILVNEML---------------------DPRLPP-LSV------DIRGKVISIMEVAFLCLDNNPE 214 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~-~~~------~~~~~~~~~~~li~~~l~~~p~ 214 (228)
||....... .....+. ...... ... .....+..+.+++.+||+.||+
T Consensus 203 pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~ 277 (303)
T cd07869 203 AFPGMKDIQ-----DQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPK 277 (303)
T ss_pred CCCCCccHH-----HHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCch
Confidence 986432110 0000000 000000 000 0011235678999999999999
Q ss_pred CCCCHHHHHH
Q 040501 215 SRPNMQTICQ 224 (228)
Q Consensus 215 ~Rpt~~~il~ 224 (228)
+|||+.++++
T Consensus 278 ~R~s~~~~l~ 287 (303)
T cd07869 278 NRLSAQAALS 287 (303)
T ss_pred hccCHHHHhc
Confidence 9999999985
No 78
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-41 Score=257.54 Aligned_cols=208 Identities=24% Similarity=0.347 Sum_probs=165.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeee--cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTH--ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
+...+||.+|++++|+|||+++++..+ .+.+|+|+|||..|.+... ......+++.+++++++++..||.|||.+
T Consensus 153 ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~Q 229 (576)
T KOG0585|consen 153 EKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQ 229 (576)
T ss_pred HHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhc
Confidence 467899999999999999999999864 5689999999998876532 12222389999999999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-----ceecccccceeCCcccccCC----cccchhhhhHH
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-----WTEFAGTYGYVAPELAYTMK----VTAKCDVYSFG 151 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~----~~~~~DiwslG 151 (228)
||+||||||+|+|++.+|.+||+|||.+......... .....|||.|+|||...+.. .+.+.||||+|
T Consensus 230 ---giiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalG 306 (576)
T KOG0585|consen 230 ---GIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALG 306 (576)
T ss_pred ---CeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhh
Confidence 9999999999999999999999999988865322111 23368999999999887632 25678999999
Q ss_pred HHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 152 VLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 152 ~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+++|.++.|+.||... ........+....+..... ......+.+||++||.+||..|.+..+|..
T Consensus 307 VTLYCllfG~~PF~~~------~~~~l~~KIvn~pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 307 VTLYCLLFGQLPFFDD------FELELFDKIVNDPLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred hhHHHhhhccCCcccc------hHHHHHHHHhcCcccCCCc--ccccHHHHHHHHHHhhcChhheeehhhhee
Confidence 9999999999997532 2334455555444432221 245567899999999999999999988753
No 79
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-41 Score=265.68 Aligned_cols=212 Identities=29% Similarity=0.428 Sum_probs=178.1
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++.|++|+++++.++||||++++|++.....+|+|||+|.||+|.++++.... .++..+.+.++.+.+.||+|||+.
T Consensus 205 ~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k- 281 (474)
T KOG0194|consen 205 IKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSK- 281 (474)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHC-
Confidence 46789999999999999999999999999999999999999999999987654 389999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-C
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-G 160 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g 160 (228)
+++||||-.+|+|++.++.+||+|||++..............-+..|+|||.+....++.++||||+|+++||+++ |
T Consensus 282 --~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g 359 (474)
T KOG0194|consen 282 --NCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENG 359 (474)
T ss_pred --CCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccC
Confidence 9999999999999999999999999998765422222222345789999999999999999999999999999998 8
Q ss_pred CCCccccccccCCCchhhhhhhcCCCC-CCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRL-PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
..||..... ......+..... .+.+ ...+.++..++.+||..+|++|||+.++.+.|+
T Consensus 360 ~~Py~g~~~------~~v~~kI~~~~~r~~~~---~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 360 AEPYPGMKN------YEVKAKIVKNGYRMPIP---SKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLE 418 (474)
T ss_pred CCCCCCCCH------HHHHHHHHhcCccCCCC---CCCHHHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence 889765433 234444422222 2211 155667889999999999999999999998875
No 80
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.7e-40 Score=257.77 Aligned_cols=213 Identities=23% Similarity=0.363 Sum_probs=166.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+||++++++|..+...++||||+.+++|.+++.... .++...+..++.|++.|+.|||+.+
T Consensus 48 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~- 123 (333)
T cd06650 48 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH- 123 (333)
T ss_pred HHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC-
Confidence 468899999999999999999999999999999999999999999987543 3788899999999999999999742
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
+++|+||||+||+++.++.++|+|||++...... ......++..|+|||.+.+..++.++|+|||||++|++++|..
T Consensus 124 -~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~ 200 (333)
T cd06650 124 -KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRY 200 (333)
T ss_pred -CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 7999999999999999999999999998754322 1223467889999999988889999999999999999999999
Q ss_pred CccccccccCC----------Cch----------------------------hhhhhhcCCCCCCCchhhhhhHHHHHHH
Q 040501 163 PRDFLSNVSSS----------NPN----------------------------ILVNEMLDPRLPPLSVDIRGKVISIMEV 204 (228)
Q Consensus 163 p~~~~~~~~~~----------~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l 204 (228)
||......... ... .....+.....+... ....+.++.++
T Consensus 201 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 278 (333)
T cd06650 201 PIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLP--SGVFGAEFQDF 278 (333)
T ss_pred CCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCC--CCCcCHHHHHH
Confidence 98643210000 000 000000000000000 01245678999
Q ss_pred HHHhhccCCCCCCCHHHHHH
Q 040501 205 AFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 205 i~~~l~~~p~~Rpt~~~il~ 224 (228)
+.+||+.||++|||+.++++
T Consensus 279 i~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 279 VNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred HHHhccCCcccCcCHHHHhh
Confidence 99999999999999999975
No 81
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=4.1e-40 Score=248.20 Aligned_cols=210 Identities=27% Similarity=0.420 Sum_probs=169.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.+.|+||+++++++. ....+++||++.+++|.+++.... .+++..+..++.|++.|+.+||+.
T Consensus 41 ~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~-- 114 (257)
T cd05116 41 DELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEET-- 114 (257)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 56889999999999999999999875 456789999999999999986543 388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc---eecccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW---TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
|++|+||||.||+++.++.++|+|||.+.......... ....++..|+|||.+....++.++|+||||+++|+|++
T Consensus 115 -~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t 193 (257)
T cd05116 115 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFS 193 (257)
T ss_pred -CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999987665433221 11223568999999888888999999999999999997
Q ss_pred -CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 160 -GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 160 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|..||..... ......+.....+..+ ...+.++.++|.+||+.||.+|||+.+|.+.|++
T Consensus 194 ~g~~p~~~~~~------~~~~~~i~~~~~~~~~---~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 194 YGQKPYKGMKG------NEVTQMIESGERMECP---QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCCCCCH------HHHHHHHHCCCCCCCC---CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 9999864321 1222222222221111 2456678999999999999999999999999874
No 82
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.1e-40 Score=248.19 Aligned_cols=211 Identities=23% Similarity=0.384 Sum_probs=168.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.++++++|+||+++++++.. ...++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+.
T Consensus 40 ~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-- 114 (257)
T cd05115 40 DEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGPLNKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGK-- 114 (257)
T ss_pred HHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhc--
Confidence 568899999999999999999998754 57899999999999999986533 2388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc---eecccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW---TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
|++|+||||+||+++.++.++|+|||++.......... ....++..|+|||.+.+..++.++|+||||+++|++++
T Consensus 115 -~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~ 193 (257)
T cd05115 115 -NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFS 193 (257)
T ss_pred -CeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhc
Confidence 99999999999999999999999999987654332211 11223568999999888888999999999999999996
Q ss_pred -CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 160 -GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 160 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|..||..... ......+........ ...++.++.+++.+||..+|++||++.++.+.|++
T Consensus 194 ~g~~p~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 194 YGQKPYKKMKG------PEVMSFIEQGKRLDC---PAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred CCCCCcCcCCH------HHHHHHHHCCCCCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 9999864322 112222222221111 12456688999999999999999999999999874
No 83
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4e-40 Score=249.40 Aligned_cols=213 Identities=27% Similarity=0.483 Sum_probs=173.3
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++.|.+|+.++++++|+||+++++++......+++||++.+++|.+++..... .++..+++.++.|++.|+.|||+.
T Consensus 49 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~~- 125 (266)
T cd05033 49 RLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSEM- 125 (266)
T ss_pred HHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 35688899999999999999999999999999999999999999999876433 488999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCce--ecccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT--EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
|++|+||+|+||+++.++.++++|||++........... ...++..|+|||.+.+..++.++|+||||+++|++++
T Consensus 126 --~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~ 203 (266)
T cd05033 126 --NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMS 203 (266)
T ss_pred --CcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHc
Confidence 999999999999999999999999999987652222111 2234567999999988889999999999999999997
Q ss_pred -CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 160 -GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 160 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|..||.... .......+......+.. ...+..+.+++.+||+.+|++||++.++++.|++
T Consensus 204 ~g~~p~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 204 YGERPYWDMS------NQDVIKAVEDGYRLPPP---MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred cCCCCCCCCC------HHHHHHHHHcCCCCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 999975322 11222222222111111 2456678999999999999999999999999874
No 84
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.7e-41 Score=254.82 Aligned_cols=212 Identities=36% Similarity=0.587 Sum_probs=166.3
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.|.+|++.+++++||||+++++++......++|+||+.+++|.+++.... ...++..+++.++.|++.|+.|||+.
T Consensus 45 ~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~- 122 (259)
T PF07714_consen 45 EEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSN- 122 (259)
T ss_dssp HHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHT-
T ss_pred ceeeeecccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccc-
Confidence 4688999999999999999999999998888999999999999999998762 23389999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
+++|++|+++||+++.++.+||+|||++......... .........|+|||.+.+..++.++||||||+++|++++
T Consensus 123 --~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~ 200 (259)
T PF07714_consen 123 --NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILT 200 (259)
T ss_dssp --TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHT
T ss_pred --cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999998876322111 122345678999999988889999999999999999999
Q ss_pred -CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHh
Q 040501 160 -GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226 (228)
Q Consensus 160 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 226 (228)
|..||... ........+.+....... ..++..+.+++.+||..+|.+|||+.++++.|
T Consensus 201 ~~~~p~~~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 201 LGKFPFSDY------DNEEIIEKLKQGQRLPIP---DNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TSSGTTTTS------CHHHHHHHHHTTEETTSB---TTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ccccccccc------ccccccccccccccceec---cchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 67886432 222333333333322221 24566789999999999999999999999986
No 85
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.1e-40 Score=258.89 Aligned_cols=206 Identities=23% Similarity=0.325 Sum_probs=168.4
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+..|.+++..+ +||||+++++++......|+||||+.+++|...+.... .+++..+..++.|++.||.|||+.
T Consensus 40 ~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~- 115 (321)
T cd05591 40 DCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRH- 115 (321)
T ss_pred HHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 3567888888876 79999999999999999999999999999998886543 378899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|+||||+++|+|++|.
T Consensus 116 --~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~ 193 (321)
T cd05591 116 --GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQ 193 (321)
T ss_pred --CeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCC
Confidence 999999999999999999999999999875433333334456889999999998888999999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC-------CHHHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP-------NMQTICQ 224 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-------t~~~il~ 224 (228)
.||.... .......+........ ...+.++.+++.+||+.||.+|| ++.++++
T Consensus 194 ~Pf~~~~------~~~~~~~i~~~~~~~p----~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 194 PPFEADN------EDDLFESILHDDVLYP----VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred CCCCCCC------HHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 9986432 2233333333222111 12455788999999999999999 7777764
No 86
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=7.4e-40 Score=247.31 Aligned_cols=214 Identities=26% Similarity=0.473 Sum_probs=173.2
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+.+|++++++++|+||+++++++......|+++|++.+++|.+++.... ...+++..+..++.|++.|+.+||+.
T Consensus 45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~- 122 (261)
T cd05068 45 PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ- 122 (261)
T ss_pred HHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 3568899999999999999999999999999999999999999999987644 23488999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
|++|+||+|+||+++.++.++|+|||++......... ......+..|+|||.+.+..++.++|+||||+++|++++
T Consensus 123 --~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~ 200 (261)
T cd05068 123 --NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTY 200 (261)
T ss_pred --CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998876532211 111223457999999988889999999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|+.||.... .......+........ ....+..+.+++.+||+.+|.+||++.++++.|+.
T Consensus 201 g~~p~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 201 GRMPYPGMT------NAEVLQQVDQGYRMPC---PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCCCCCCCC------HHHHHHHHHcCCCCCC---CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 999985432 2222222222211111 12345678999999999999999999999999874
No 87
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.9e-40 Score=248.15 Aligned_cols=211 Identities=28% Similarity=0.516 Sum_probs=170.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+||+++++++......|+++|++++++|.+++..... .+++..++.++.|++.|+++||+.
T Consensus 44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~-- 119 (256)
T cd05059 44 DDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLESN-- 119 (256)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 4688999999999999999999999999999999999999999999875443 488999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc-eecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-C
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW-TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-G 160 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g 160 (228)
|++|+||+|+||+++.++.++|+|||.+.......... ....++..|+|||.+.+..++.++|+||||+++|++++ |
T Consensus 120 -~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g 198 (256)
T cd05059 120 -GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEG 198 (256)
T ss_pred -CcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccC
Confidence 99999999999999999999999999887654322111 11223457999999988889999999999999999998 8
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
..||..... ............... ....+.++.+++.+||..+|++|||+.++++.|.
T Consensus 199 ~~p~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 199 KMPYERFSN------SEVVESVSAGYRLYR---PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred CCCCCCCCH------HHHHHHHHcCCcCCC---CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 999754321 112222221111111 1235668999999999999999999999999874
No 88
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.3e-40 Score=259.09 Aligned_cols=208 Identities=23% Similarity=0.324 Sum_probs=165.7
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+.+|+.++.++ +|++|+++++++......|+||||+.+++|..++.... .+++..+..++.|++.||+|||+.
T Consensus 40 ~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~- 115 (327)
T cd05617 40 DWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHER- 115 (327)
T ss_pred HHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 3467899999888 69999999999999999999999999999998886543 389999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|+||||+++|+|++|.
T Consensus 116 --~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~ 193 (327)
T cd05617 116 --GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGR 193 (327)
T ss_pred --CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCC
Confidence 999999999999999999999999999875433333334467899999999999888999999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM 219 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 219 (228)
.||..........................+ ...+..+.+++.+||+.||.+|+++
T Consensus 194 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 194 SPFDIITDNPDMNTEDYLFQVILEKPIRIP---RFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCccCCCcccccHHHHHHHHHhCCCCCC---CCCCHHHHHHHHHHhccCHHHcCCC
Confidence 998643222111121222222111111111 1344568899999999999999985
No 89
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2e-40 Score=257.79 Aligned_cols=205 Identities=24% Similarity=0.348 Sum_probs=164.1
Q ss_pred HHHHHHHHHH---hccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 040501 3 KEFLREITVL---TEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH 79 (228)
Q Consensus 3 ~~~~~E~~~l---~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 79 (228)
+.+.+|+.++ +.++||||+++++++......|+||||+.+++|...+... .+++..+..++.|++.||.|||+
T Consensus 44 ~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~ 119 (324)
T cd05589 44 ESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLHE 119 (324)
T ss_pred HHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHh
Confidence 3456666555 4567999999999999999999999999999998887542 38999999999999999999999
Q ss_pred CCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 80 DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 80 ~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
. |++||||||+||+++.++.+||+|||++..............|++.|+|||.+.+..++.++|+||||+++|+|++
T Consensus 120 ~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 196 (324)
T cd05589 120 N---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLV 196 (324)
T ss_pred C---CeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHh
Confidence 9 9999999999999999999999999988754333333344678899999999998889999999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP-----NMQTICQ 224 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~il~ 224 (228)
|..||.... .......+....... ....+..+.++|.+||+.||.+|| ++.++++
T Consensus 197 G~~pf~~~~------~~~~~~~i~~~~~~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 197 GESPFPGDD------EEEVFDSIVNDEVRY----PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred CCCCCCCCC------HHHHHHHHHhCCCCC----CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 999986432 122222232222111 123456788999999999999999 4666654
No 90
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.5e-40 Score=258.79 Aligned_cols=207 Identities=25% Similarity=0.384 Sum_probs=164.7
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+..|+.++.++ +||||+++++++......|+||||+.+++|..++.... .+++..+..++.|++.||.|||+.
T Consensus 40 ~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH~~- 115 (329)
T cd05618 40 DWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER- 115 (329)
T ss_pred HHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 3467888888877 79999999999999999999999999999988886543 388999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|+||||+++|+|++|.
T Consensus 116 --~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~ 193 (329)
T cd05618 116 --GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 193 (329)
T ss_pred --CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCC
Confidence 999999999999999999999999999875432333334457899999999999988999999999999999999999
Q ss_pred CCccccccccCC--Cc-hhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCH
Q 040501 162 HPRDFLSNVSSS--NP-NILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM 219 (228)
Q Consensus 162 ~p~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 219 (228)
.||......... .. ......+...... .+ ...+..+.+++.+||+.||.+|||+
T Consensus 194 ~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~-~p---~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 194 SPFDIVGSSDNPDQNTEDYLFQVILEKQIR-IP---RSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCccCCCcCCcccccHHHHHHHHhcCCCC-CC---CCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 998643221111 11 1111222222211 11 2345578899999999999999984
No 91
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.7e-40 Score=251.75 Aligned_cols=218 Identities=23% Similarity=0.369 Sum_probs=168.6
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeec--CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH 79 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 79 (228)
++.+.+|+++++.++||||+++++++... ...+++||++.+++|.+++... .+++.+++.++.|++.|+.|||+
T Consensus 50 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~ 125 (283)
T cd05080 50 TSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHS 125 (283)
T ss_pred HHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHH
Confidence 35678999999999999999999988653 4689999999999999998653 28999999999999999999999
Q ss_pred CCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC---ceecccccceeCCcccccCCcccchhhhhHHHHHHH
Q 040501 80 DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN---WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 80 ~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 156 (228)
. |++|+||||+||+++.++.++|+|||++......... .....++..|+|||.+.+..++.++||||||+++|+
T Consensus 126 ~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~e 202 (283)
T cd05080 126 Q---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYE 202 (283)
T ss_pred C---CeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHH
Confidence 9 9999999999999999999999999998765432221 112234567999999988888999999999999999
Q ss_pred HHhCCCCccccccccC--------CCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 157 VIKGKHPRDFLSNVSS--------SNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|++|..||........ ................. .....++.++.+++.+||+.+|++|||++++++.|++
T Consensus 203 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~ 280 (283)
T cd05080 203 LLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRL--PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKE 280 (283)
T ss_pred HHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCC--CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 9999999754321100 00000000011111000 0112456789999999999999999999999999863
No 92
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.3e-40 Score=248.52 Aligned_cols=209 Identities=22% Similarity=0.274 Sum_probs=174.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
.+.+.|-+||+.+.||.++.++..|+.+...|++||||+||+|..+.+++.. +.++++.+..++.+++-||+|||-.
T Consensus 122 ~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~-~~fse~~aRFYaAEvl~ALEYLHml-- 198 (459)
T KOG0610|consen 122 KRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPG-KRFSESAARFYAAEVLLALEYLHML-- 198 (459)
T ss_pred HHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCC-CccchhhHHHHHHHHHHHHHHHHhh--
Confidence 3567799999999999999999999999999999999999999999886654 4599999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCC----------------------------------C----------
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD----------------------------------S---------- 118 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~----------------------------------~---------- 118 (228)
||++|||||+|||+.++|++.|+||.++...... .
T Consensus 199 -GivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~ 277 (459)
T KOG0610|consen 199 -GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESAS 277 (459)
T ss_pred -ceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhcccccccccccccc
Confidence 9999999999999999999999999987655210 0
Q ss_pred ------------CCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCC
Q 040501 119 ------------SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPR 186 (228)
Q Consensus 119 ------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 186 (228)
.....+.||-+|+|||++.|...+.++|.|+||+++|||+.|..||.. .+..+.+..++...
T Consensus 278 ~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG------~~~~~Tl~NIv~~~ 351 (459)
T KOG0610|consen 278 RSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKG------SNNKETLRNIVGQP 351 (459)
T ss_pred ccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCC------CCchhhHHHHhcCC
Confidence 001235678899999999999999999999999999999999999754 33445555555544
Q ss_pred CCCCchhhhhhHHHHHHHHHHhhccCCCCCCC----HHHHH
Q 040501 187 LPPLSVDIRGKVISIMEVAFLCLDNNPESRPN----MQTIC 223 (228)
Q Consensus 187 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il 223 (228)
+..... ...+....+||++.|.+||++|.- ++||.
T Consensus 352 l~Fp~~--~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 352 LKFPEE--PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred CcCCCC--CcchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence 432222 256667899999999999999987 66654
No 93
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=4.8e-40 Score=248.05 Aligned_cols=214 Identities=29% Similarity=0.454 Sum_probs=176.6
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC------CCCCCHHHHHHHHHHHHHHHH
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS------AEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~------~~~~~~~~~~~~~~~l~~~l~ 75 (228)
.+.+.+|++.++.++|+||+++++++......+++|||+++++|.+++..... ...+++..++.++.|++.||+
T Consensus 40 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 119 (262)
T cd00192 40 RKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119 (262)
T ss_pred HHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999986521 244899999999999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCC--CCceecccccceeCCcccccCCcccchhhhhHHHH
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVL 153 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~ 153 (228)
+||+. |++|+||+|+||+++.++.++|+|||.+....... .......++..|+|||.+.+..++.++|+||||++
T Consensus 120 ~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 196 (262)
T cd00192 120 YLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVL 196 (262)
T ss_pred HHHcC---CcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHH
Confidence 99999 99999999999999999999999999998765432 11233456788999999988889999999999999
Q ss_pred HHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 154 ALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 154 l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
+|+|++ |..||.... ................ ....+.++.+++.+||..+|.+|||+.++++.|+
T Consensus 197 l~~l~~~g~~p~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 197 LWEIFTLGATPYPGLS------NEEVLEYLRKGYRLPK---PEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHhcCCCCCCCCC------HHHHHHHHHcCCCCCC---CccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 999998 699976432 2223333332222111 1234668999999999999999999999999875
No 94
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.6e-40 Score=257.68 Aligned_cols=206 Identities=25% Similarity=0.323 Sum_probs=168.6
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+.+|.++++.+ +||||+++++++......|+||||+.+++|.+++.... .+++..+..++.|++.||+|||+.
T Consensus 40 ~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~- 115 (318)
T cd05570 40 ECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHER- 115 (318)
T ss_pred HHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 3567888899888 69999999999999999999999999999998887553 388999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||||+||+++.++.++|+|||++..............+++.|+|||++.+..++.++|+|||||++|+|++|.
T Consensus 116 --~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~ 193 (318)
T cd05570 116 --GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQ 193 (318)
T ss_pred --CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCC
Confidence 999999999999999999999999998865332333333456889999999999989999999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCH-----HHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM-----QTICQ 224 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~il~ 224 (228)
.||.... .......+....... ....+..+.++|.+||+.||.+|||+ .++++
T Consensus 194 ~pf~~~~------~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 194 SPFEGDD------EDELFQSILEDEVRY----PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCCCCCC------HHHHHHHHHcCCCCC----CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 9986332 222222232222211 12345678999999999999999999 77764
No 95
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.6e-40 Score=250.38 Aligned_cols=214 Identities=23% Similarity=0.402 Sum_probs=171.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC--------------CCCCCHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS--------------AEELGWSRRINVIK 68 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--------------~~~~~~~~~~~~~~ 68 (228)
+.+.+|++++++++|+||+++++++......|++|||+++++|.+++..... ...+++.+++.++.
T Consensus 52 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 131 (283)
T cd05090 52 GEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAI 131 (283)
T ss_pred HHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999999853221 22377888999999
Q ss_pred HHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchh
Q 040501 69 GIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCD 146 (228)
Q Consensus 69 ~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~D 146 (228)
|++.|++|||+. |++|+||||+||+++.++.++|+|||++......... .....++..|+|||.+.+..++.++|
T Consensus 132 ~i~~al~~lH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 208 (283)
T cd05090 132 QIAAGMEYLSSH---FFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSD 208 (283)
T ss_pred HHHHHHHHHHhc---CeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhh
Confidence 999999999999 9999999999999999999999999999765432211 22234466799999998888999999
Q ss_pred hhhHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 147 VYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 147 iwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
+||||+++|+|++ |..||.... .......+........ ...++..+.+++.+||+.||.+||++.++++.
T Consensus 209 v~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 209 IWSFGVVLWEIFSFGLQPYYGFS------NQEVIEMVRKRQLLPC---SEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred hHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHcCCcCCC---CCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 9999999999998 998975321 1122222222222211 12455678999999999999999999999998
Q ss_pred hhC
Q 040501 226 LCK 228 (228)
Q Consensus 226 l~~ 228 (228)
|..
T Consensus 280 l~~ 282 (283)
T cd05090 280 LRS 282 (283)
T ss_pred hhc
Confidence 863
No 96
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2e-40 Score=261.68 Aligned_cols=209 Identities=20% Similarity=0.259 Sum_probs=168.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++||||+++++++......|+||||+.+++|.+++... .+++..+..++.|++.||+|||+.
T Consensus 88 ~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~-- 161 (370)
T cd05596 88 AFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSM-- 161 (370)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 34678999999999999999999999999999999999999999998653 278888999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCC-CceecccccceeCCcccccC----CcccchhhhhHHHHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS-NWTEFAGTYGYVAPELAYTM----KVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~----~~~~~~DiwslG~~l~~~ 157 (228)
|++||||||+||+++.++.++|+|||.+........ ......|++.|+|||.+.+. .++.++|+|||||++|+|
T Consensus 162 -~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyel 240 (370)
T cd05596 162 -GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 240 (370)
T ss_pred -CeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHH
Confidence 999999999999999999999999999876543222 22345689999999988654 378899999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCC--CCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPES--RPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rpt~~~il~ 224 (228)
++|..||.... .......+...............+.++.++|.+||..+|.+ |+|++++++
T Consensus 241 ltG~~Pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 241 LVGDTPFYADS------LVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred HhCCCCcCCCC------HHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 99999986432 22223333322211111112245678899999999999987 999999875
No 97
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=6.2e-40 Score=247.01 Aligned_cols=211 Identities=25% Similarity=0.402 Sum_probs=176.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+++.+|++++++++|+||+++++++.+....++++||+++++|.+++.... ...++..++..++.|++.++.+||+.
T Consensus 44 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~-- 120 (256)
T cd08221 44 RDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA-- 120 (256)
T ss_pred HHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 568899999999999999999999999999999999999999999987643 23478999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++|+|||.+..............+++.|.|||.+.+..++.++|+||||+++|+|++|..
T Consensus 121 -~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~ 199 (256)
T cd08221 121 -GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKR 199 (256)
T ss_pred -CccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCC
Confidence 9999999999999999999999999998766544333344567889999999988888899999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHh
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 226 (228)
||... ........+......... ...+.++.+++.+||..+|.+|||+.++++.+
T Consensus 200 ~~~~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 200 TFDAT------NPLNLVVKIVQGNYTPVV---SVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CCCCC------CHHHHHHHHHcCCCCCCc---cccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 97532 223333344444333222 34566789999999999999999999998753
No 98
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.4e-40 Score=259.44 Aligned_cols=210 Identities=22% Similarity=0.281 Sum_probs=166.3
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+..|+++++.+ +|++|+++++++......++||||+.+++|.+++.... .+++..+..++.|++.||.|||+.
T Consensus 49 ~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~- 124 (332)
T cd05614 49 EHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKL- 124 (332)
T ss_pred HHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 3567899999999 59999999999999999999999999999999886543 388899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCC-CceecccccceeCCcccccCC-cccchhhhhHHHHHHHHHh
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS-NWTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~~~~ 159 (228)
|++||||||+||+++.++.++|+|||++........ ......|++.|+|||.+.+.. ++.++|||||||++|+|++
T Consensus 125 --~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ellt 202 (332)
T cd05614 125 --GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLT 202 (332)
T ss_pred --CcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhc
Confidence 999999999999999999999999999876433222 223456899999999987654 7889999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP-----NMQTICQ 224 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~il~ 224 (228)
|..||....... ........+.....+ .. ...+..+.+++.+||+.||.+|| +++++++
T Consensus 203 g~~pf~~~~~~~--~~~~~~~~~~~~~~~-~~---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 203 GASPFTLEGERN--TQSEVSRRILKCDPP-FP---SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCCCCCCCCCCC--CHHHHHHHHhcCCCC-CC---CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 999986432211 111122222222111 11 23455788999999999999999 6667764
No 99
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=4.5e-40 Score=250.50 Aligned_cols=214 Identities=24% Similarity=0.383 Sum_probs=172.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC-------CCCCCHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-------AEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~l~ 75 (228)
..+.+|+.+++.++|+||+++++++......+++|||+++++|.+++..... ...+++..++.++.|++.||.
T Consensus 54 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 133 (277)
T cd05032 54 IEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMA 133 (277)
T ss_pred HHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999865322 123678899999999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHH
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVL 153 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~ 153 (228)
|||+. |++|+||+|+||+++.++.++|+|||++......... .....++..|+|||.+.+..++.++||||||++
T Consensus 134 ~lH~~---~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 210 (277)
T cd05032 134 YLAAK---KFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVV 210 (277)
T ss_pred HHHhC---CccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHH
Confidence 99999 9999999999999999999999999998765433221 122345678999999988889999999999999
Q ss_pred HHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 154 ALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 154 l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
+|++++ |..||.... ................+ ...+..+.+++.+||+.+|.+|||+.++++.|++
T Consensus 211 l~el~t~g~~p~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 211 LWEMATLAEQPYQGLS------NEEVLKFVIDGGHLDLP---ENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HHHhhccCCCCCccCC------HHHHHHHHhcCCCCCCC---CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 999998 999975322 12222222222222211 2346678999999999999999999999999875
No 100
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3e-40 Score=255.80 Aligned_cols=204 Identities=26% Similarity=0.370 Sum_probs=164.9
Q ss_pred HHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 4 EFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 4 ~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
.+..|..++... +||||+++++++..+...|+||||+.+++|.+++.... .+++..+..++.|++.||.|||+.
T Consensus 41 ~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~-- 115 (316)
T cd05592 41 CTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKK-- 115 (316)
T ss_pred HHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 455677777655 89999999999999999999999999999999887543 388899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|||||||++|+|++|..
T Consensus 116 -~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~ 194 (316)
T cd05592 116 -GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQS 194 (316)
T ss_pred -CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCC
Confidence 9999999999999999999999999998765433333444578999999999998889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHH-HHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQ-TIC 223 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~-~il 223 (228)
||.... .......+..... ..+ ...+.++.+++.+||+.||.+||++. +++
T Consensus 195 Pf~~~~------~~~~~~~i~~~~~-~~~---~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 195 PFHGED------EDELFDSILNDRP-HFP---RWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCCCCC------HHHHHHHHHcCCC-CCC---CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 986432 1222222222211 111 23455688999999999999999875 443
No 101
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=241.29 Aligned_cols=217 Identities=21% Similarity=0.269 Sum_probs=184.7
Q ss_pred ChHHHHHHHHHHhcc-CCCccceeeeeeee----cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 040501 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTH----ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 1 ~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 75 (228)
|+....+|+++--.. .|+|||.++++|+. ...+.+|||.+.||.|++.++.++. ..+++.++..++.||..|+.
T Consensus 97 Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~ 175 (400)
T KOG0604|consen 97 DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVR 175 (400)
T ss_pred cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHH
Confidence 455677899887777 59999999999853 3567899999999999999987764 45999999999999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcC---CCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHH
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDL---EYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGV 152 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~---~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~ 152 (228)
|||+. +|.||||||+|++++. +..+||+|||.++... ......+++.||.|.|||++...+|+...|+||+|+
T Consensus 176 ~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~-~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgV 251 (400)
T KOG0604|consen 176 YLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ-EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGV 251 (400)
T ss_pred HHHhc---chhhccCChhheeeecCCCCcceEecccccccccC-CCccccCCcccccccCHHHhCchhcCCCCCccchhH
Confidence 99999 9999999999999964 4568999999998644 234456678899999999999999999999999999
Q ss_pred HHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 153 LALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 153 ~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++|-|++|.+||-.... ..-.-....++..+........|...++...++|+++|..+|.+|.|+.++.+
T Consensus 252 imYIlLCGyPPFYS~hg--~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 252 IMYILLCGYPPFYSNHG--LAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred HHHHhhcCCCcccccCC--ccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 99999999999854433 22233456677777777778889999999999999999999999999998864
No 102
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.9e-40 Score=257.81 Aligned_cols=201 Identities=23% Similarity=0.310 Sum_probs=163.1
Q ss_pred HHHHHHH-HHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 4 EFLREIT-VLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 4 ~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
.+..|.. +++.++||||+++++.+......|+||||+.+++|..++.... .+++..+..++.|++.||.|||+.
T Consensus 41 ~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~-- 115 (323)
T cd05575 41 HIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRER---SFPEPRARFYAAEIASALGYLHSL-- 115 (323)
T ss_pred HHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 3445544 4577899999999999999999999999999999999887543 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++||||||+++|+|++|..
T Consensus 116 -givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~ 194 (323)
T cd05575 116 -NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLP 194 (323)
T ss_pred -CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCC
Confidence 9999999999999999999999999998754333333344568999999999998889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQ 220 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 220 (228)
||.... .......+....... ....+..+.++|.+||+.||.+||++.
T Consensus 195 pf~~~~------~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 195 PFYSRD------TAEMYDNILNKPLRL----KPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCCC------HHHHHHHHHcCCCCC----CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 985322 222333333322211 123456789999999999999999985
No 103
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=8.3e-40 Score=247.03 Aligned_cols=212 Identities=27% Similarity=0.418 Sum_probs=171.4
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+.+|++++++++|+||+++++.+......|++||++.+++|.+++.... ..++...+..++.|++.|+.|||+.
T Consensus 44 ~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~- 120 (262)
T cd06613 44 FEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHET- 120 (262)
T ss_pred HHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 3568899999999999999999999999999999999999999999887542 2388999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC---CcccchhhhhHHHHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM---KVTAKCDVYSFGVLALEVI 158 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DiwslG~~l~~~~ 158 (228)
|++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+.+. .++.++|+||+|+++|+|+
T Consensus 121 --~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~ 198 (262)
T cd06613 121 --GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELA 198 (262)
T ss_pred --CceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHH
Confidence 99999999999999999999999999987655433233345677889999998776 7888999999999999999
Q ss_pred hCCCCccccccccCCCchhhhhhhcCCCC-CCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 159 KGKHPRDFLSNVSSSNPNILVNEMLDPRL-PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 159 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+|..||...... ........... +.........+.++.+++.+||..+|.+|||+.++++
T Consensus 199 tg~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 199 ELQPPMFDLHPM------RALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred hCCCCCCCCCHH------HHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 999997532211 11111111111 1111122355678999999999999999999999875
No 104
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-41 Score=282.31 Aligned_cols=213 Identities=27% Similarity=0.448 Sum_probs=178.6
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCC----CCCCCCHHHHHHHHHHHHHHHHHh
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT----SAEELGWSRRINVIKGIAHALSYL 77 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~l 77 (228)
..+|.+|..+|+.++||||+++++++-+....+|++|||.||+|..+++... ....+.+...+.++.++|+|..||
T Consensus 739 ~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YL 818 (1025)
T KOG1095|consen 739 VSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYL 818 (1025)
T ss_pred HHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHH
Confidence 5689999999999999999999999999999999999999999999998751 123488999999999999999999
Q ss_pred hhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCcee--cccccceeCCcccccCCcccchhhhhHHHHHH
Q 040501 78 HHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE--FAGTYGYVAPELAYTMKVTAKCDVYSFGVLAL 155 (228)
Q Consensus 78 h~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~--~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~ 155 (228)
+++ +++||||..+|+|++....+||.|||+++.+......... -..+..|||||.+....++.++||||||+++|
T Consensus 819 e~~---~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllW 895 (1025)
T KOG1095|consen 819 ESK---HFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLW 895 (1025)
T ss_pred HhC---CCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHH
Confidence 999 9999999999999999999999999999965443333211 23467899999999999999999999999999
Q ss_pred HHHh-CCCCccccccccCCCchhhhh-hhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 156 EVIK-GKHPRDFLSNVSSSNPNILVN-EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 156 ~~~~-g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|+++ |..||+..... +... -...+++++ ...++..++++|.+||+.+|.+||++..|++.+.
T Consensus 896 EifslG~~PY~~~~n~------~v~~~~~~ggRL~~----P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~ 959 (1025)
T KOG1095|consen 896 EIFSLGATPYPSRSNF------EVLLDVLEGGRLDP----PSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDP 959 (1025)
T ss_pred HHHhCCCCCCCCcchH------HHHHHHHhCCccCC----CCCCChHHHHHHHHHccCChhhCccHHHHHhhhh
Confidence 9998 99998754433 2222 222233332 2467778999999999999999999999998764
No 105
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=4.7e-40 Score=252.34 Aligned_cols=214 Identities=23% Similarity=0.392 Sum_probs=171.0
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcC-------------CCCCCCCHHHHHHHHH
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND-------------TSAEELGWSRRINVIK 68 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-------------~~~~~~~~~~~~~~~~ 68 (228)
..+.+|+++++++ +|+||+++++++..+...+++|||+.+++|.+++... .....+++..++.++.
T Consensus 60 ~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 139 (293)
T cd05053 60 SDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAY 139 (293)
T ss_pred HHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHH
Confidence 4578899999999 8999999999999999999999999999999998643 2234588999999999
Q ss_pred HHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchh
Q 040501 69 GIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCD 146 (228)
Q Consensus 69 ~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~D 146 (228)
|++.||+|||+. |++|+||||+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.++|
T Consensus 140 qi~~al~~LH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 216 (293)
T cd05053 140 QVARGMEFLASK---KCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSD 216 (293)
T ss_pred HHHHHHHHHHHC---CccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccc
Confidence 999999999999 9999999999999999999999999998865432211 11123456799999988888999999
Q ss_pred hhhHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 147 VYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 147 iwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
||||||++|++++ |..||.... ................ ....+..+.+++.+||..||.+|||+.++++.
T Consensus 217 i~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 217 VWSFGVLLWEIFTLGGSPYPGIP------VEELFKLLKEGYRMEK---PQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred eeehhhHHHHHhcCCCCCCCCCC------HHHHHHHHHcCCcCCC---CCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 9999999999997 889875322 1122222222211111 12345578899999999999999999999999
Q ss_pred hhC
Q 040501 226 LCK 228 (228)
Q Consensus 226 l~~ 228 (228)
|++
T Consensus 288 l~~ 290 (293)
T cd05053 288 LDR 290 (293)
T ss_pred HHH
Confidence 863
No 106
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=7.1e-40 Score=251.69 Aligned_cols=218 Identities=24% Similarity=0.436 Sum_probs=171.5
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC--------CCCCCHHHHHHHHHHHHHH
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS--------AEELGWSRRINVIKGIAHA 73 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~ 73 (228)
++.+.+|++++++++|+||+++++++..+...++++|++.+++|.+++..... ...+++..++.++.|++.|
T Consensus 63 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 142 (296)
T cd05051 63 REDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASG 142 (296)
T ss_pred HHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHH
Confidence 35688999999999999999999999998999999999999999999876431 1247899999999999999
Q ss_pred HHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHH
Q 040501 74 LSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFG 151 (228)
Q Consensus 74 l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG 151 (228)
|+|||+. |++|+||||+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.++||||||
T Consensus 143 l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 219 (296)
T cd05051 143 MRYLESL---NFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFG 219 (296)
T ss_pred HHHHHHc---CccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhH
Confidence 9999999 9999999999999999999999999998764332211 2233456789999998888899999999999
Q ss_pred HHHHHHHh--CCCCccccccccCCCchhhhhhhcCC----CCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 152 VLALEVIK--GKHPRDFLSNVSSSNPNILVNEMLDP----RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 152 ~~l~~~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
+++|++++ +..||..... .......... ............+.++.+++.+||+.||.+|||+.++++.
T Consensus 220 ~~l~el~~~~~~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~ 293 (296)
T cd05051 220 VTLWEILTLCREQPYEHLTD------QQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLF 293 (296)
T ss_pred HHHHHHHhcCCCCCCCCcCh------HHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHH
Confidence 99999997 6677643221 1111111110 0000011112345689999999999999999999999999
Q ss_pred hhC
Q 040501 226 LCK 228 (228)
Q Consensus 226 l~~ 228 (228)
|++
T Consensus 294 L~~ 296 (296)
T cd05051 294 LQR 296 (296)
T ss_pred hcC
Confidence 874
No 107
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=8.4e-41 Score=262.56 Aligned_cols=209 Identities=23% Similarity=0.301 Sum_probs=170.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++..++|+||+++++.+.++...|+||||+.+++|.+++... ..++...+..++.|++.||.|||+.
T Consensus 46 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~-- 120 (350)
T cd05573 46 AHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKL-- 120 (350)
T ss_pred HHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 45788999999999999999999999999999999999999999998765 2388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCC-----------------------------CCceecccccceeCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS-----------------------------SNWTEFAGTYGYVAP 133 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~-----------------------------~~~~~~~~~~~y~aP 133 (228)
|++||||||+||+++.++.++|+|||++....... .......|++.|+||
T Consensus 121 -giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 199 (350)
T cd05573 121 -GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAP 199 (350)
T ss_pred -CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCH
Confidence 99999999999999999999999999988665433 112345688999999
Q ss_pred cccccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCC
Q 040501 134 ELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNP 213 (228)
Q Consensus 134 E~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 213 (228)
|++.+..++.++|||||||++|+|++|..||.... .......+...............+..+.++|.+||. ||
T Consensus 200 E~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp 272 (350)
T cd05573 200 EVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT------LQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DP 272 (350)
T ss_pred HHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC------HHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-Ch
Confidence 99999999999999999999999999999986432 222222222210000000111256778999999997 99
Q ss_pred CCCCC-HHHHHH
Q 040501 214 ESRPN-MQTICQ 224 (228)
Q Consensus 214 ~~Rpt-~~~il~ 224 (228)
.+||+ ++++++
T Consensus 273 ~~R~~s~~~ll~ 284 (350)
T cd05573 273 EDRLGSFEEIKS 284 (350)
T ss_pred hhcCCCHHHHhc
Confidence 99999 999986
No 108
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=8.4e-40 Score=246.44 Aligned_cols=214 Identities=24% Similarity=0.424 Sum_probs=172.6
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+.+|+.++++++|+||+++++.+.. ...++++|++.+++|.+++..... ..+++..++.++.|++.||.+||+.
T Consensus 40 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~- 116 (257)
T cd05040 40 MDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK- 116 (257)
T ss_pred HHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC-
Confidence 3578899999999999999999999988 889999999999999999876543 3489999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC---ceecccccceeCCcccccCCcccchhhhhHHHHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN---WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~ 158 (228)
|++|+||+|+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.++|+||||+++|+|+
T Consensus 117 --~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~ 194 (257)
T cd05040 117 --RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMF 194 (257)
T ss_pred --CccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHH
Confidence 9999999999999999999999999998876543222 11234567899999998888999999999999999999
Q ss_pred h-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 159 K-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 159 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
+ |..||..... ......+...... .. .....+..+.+++.+||+.+|++|||+.++++.|.+
T Consensus 195 t~g~~p~~~~~~------~~~~~~~~~~~~~-~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 195 TYGEEPWAGLSG------SQILKKIDKEGER-LE-RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred hCCCCCCCCCCH------HHHHHHHHhcCCc-CC-CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 8 9999753221 1122211111110 00 112345678999999999999999999999998863
No 109
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.9e-40 Score=257.91 Aligned_cols=203 Identities=23% Similarity=0.281 Sum_probs=163.3
Q ss_pred HHHHHH-HHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 5 FLREIT-VLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 5 ~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
+..|.. +++.++|+||+++++++......|+||||+.+++|.+++.... .++...+..++.|++.||.|||+.
T Consensus 42 ~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~--- 115 (325)
T cd05602 42 IMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL--- 115 (325)
T ss_pred HHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 344443 4677899999999999999999999999999999999887543 277888889999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p 163 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 116 giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p 195 (325)
T cd05602 116 NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 195 (325)
T ss_pred CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCC
Confidence 99999999999999999999999999987543333333445789999999999998899999999999999999999999
Q ss_pred ccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 040501 164 RDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223 (228)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il 223 (228)
|.... .......+....... ....+..+.+++.+||+.||.+||++.+.+
T Consensus 196 f~~~~------~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 196 FYSRN------TAEMYDNILNKPLQL----KPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCCCC------HHHHHHHHHhCCcCC----CCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 85322 222222332222211 124556788999999999999999987443
No 110
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=271.48 Aligned_cols=210 Identities=23% Similarity=0.346 Sum_probs=168.7
Q ss_pred HHHHHHHHHhccC-CCccceeeeee-ee------cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 040501 4 EFLREITVLTEIR-HRNIVKFYGFC-TH------ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 4 ~~~~E~~~l~~l~-h~~i~~~~~~~-~~------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 75 (228)
.+.+|+++|+.|+ |+|||.+++.. .. ...++++||||.|+.|-+++....... +++.++++|++++++|++
T Consensus 80 ~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa 158 (738)
T KOG1989|consen 80 AVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVA 158 (738)
T ss_pred HHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHH
Confidence 4679999999996 99999999943 21 135789999999999999988654433 999999999999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc---------eecccccceeCCcccc---cCCccc
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW---------TEFAGTYGYVAPELAY---TMKVTA 143 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~---~~~~~~ 143 (228)
+||.. +..|+|||||-+|||++.+|..||||||.++......... ....-|+.|+|||++. +...++
T Consensus 159 ~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~e 237 (738)
T KOG1989|consen 159 AMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGE 237 (738)
T ss_pred HHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcc
Confidence 99998 2359999999999999999999999999887654333211 1134588999999864 667899
Q ss_pred chhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 040501 144 KCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223 (228)
Q Consensus 144 ~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il 223 (228)
|+|||+|||+||-++....||+.... ..++........ ...++..+.+||+.||+.||.+||++.+++
T Consensus 238 KsDIWALGclLYkLCy~t~PFe~sg~----------laIlng~Y~~P~--~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~ 305 (738)
T KOG1989|consen 238 KSDIWALGCLLYKLCYFTTPFEESGK----------LAILNGNYSFPP--FPNYSDRLKDLIRTMLQPNPDERPNIYQVL 305 (738)
T ss_pred hhHHHHHHHHHHHHHHhCCCcCcCcc----------eeEEeccccCCC--CccHHHHHHHHHHHHhccCcccCCCHHHHH
Confidence 99999999999999999999874322 223333332211 147888899999999999999999999999
Q ss_pred HHhh
Q 040501 224 QLLC 227 (228)
Q Consensus 224 ~~l~ 227 (228)
+.+.
T Consensus 306 ~~~~ 309 (738)
T KOG1989|consen 306 EEIF 309 (738)
T ss_pred HHHH
Confidence 8875
No 111
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.3e-40 Score=247.29 Aligned_cols=210 Identities=25% Similarity=0.373 Sum_probs=172.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++|+||+++++.+..+...|+++||+++++|.+++.... ...++...++.++.|++.|+.+||+.
T Consensus 43 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~-- 119 (255)
T cd08219 43 EDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEK-- 119 (255)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhC--
Confidence 567889999999999999999999999999999999999999998886432 23378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++++|||.+..............+++.|+|||++.+..++.++|+||+|+++|+|++|..
T Consensus 120 -~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~ 198 (255)
T cd08219 120 -RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKH 198 (255)
T ss_pred -CcccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccC
Confidence 9999999999999999999999999998766543333344567888999999988889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
||.... ................+ ...+..+.+++.+||+.||.+|||+.+++..
T Consensus 199 p~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 199 PFQANS------WKNLILKVCQGSYKPLP---SHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCCCC------HHHHHHHHhcCCCCCCC---cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 986322 12222233222222221 2344568899999999999999999999875
No 112
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.4e-40 Score=255.50 Aligned_cols=204 Identities=25% Similarity=0.350 Sum_probs=165.0
Q ss_pred HHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 4 EFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 4 ~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
.+..|..++... +|++|+++++++......|+||||+.+++|..++.... .++..++..++.|++.||+|||+.
T Consensus 41 ~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH~~-- 115 (316)
T cd05620 41 CTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLHSK-- 115 (316)
T ss_pred HHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 456778888765 89999999999999999999999999999998887543 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++||||||+++|+|++|..
T Consensus 116 -~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~ 194 (316)
T cd05620 116 -GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQS 194 (316)
T ss_pred -CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCC
Confidence 9999999999999999999999999988754333333445678999999999998889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHH-HHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQ-TIC 223 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~-~il 223 (228)
||.... .......+.... +..+ ...+.++.+++.+||+.||.+||++. +++
T Consensus 195 Pf~~~~------~~~~~~~~~~~~-~~~~---~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 195 PFHGDD------EDELFESIRVDT-PHYP---RWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCCCC------HHHHHHHHHhCC-CCCC---CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 986332 122222222111 1111 12455788999999999999999984 554
No 113
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.6e-40 Score=249.22 Aligned_cols=212 Identities=26% Similarity=0.391 Sum_probs=168.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.++++++|+||+++++++......|+|+||+++++|.+++.... .++...+..++.|++.|+.|||+.
T Consensus 51 ~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~-- 125 (267)
T cd06646 51 SLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLHSK-- 125 (267)
T ss_pred HHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 356789999999999999999999999999999999999999999886543 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccc---cCCcccchhhhhHHHHHHHHHh
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAY---TMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~~~~~ 159 (228)
|++|+|++|+||+++.++.++|+|||.+..............++..|+|||.+. ...++.++|+||+|+++|+|++
T Consensus 126 -~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~ 204 (267)
T cd06646 126 -GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAE 204 (267)
T ss_pred -CccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHh
Confidence 999999999999999999999999999886643333333456778999999874 3346789999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCC-CCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHh
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRL-PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 226 (228)
|..||........ ......... +.........+..+.+++++||..+|.+|||++++++.|
T Consensus 205 g~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 205 LQPPMFDLHPMRA------LFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCCccccchhhh------heeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 9999753322111 011111111 111111124556789999999999999999999998754
No 114
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=9.2e-40 Score=249.57 Aligned_cols=213 Identities=20% Similarity=0.346 Sum_probs=172.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCC-------------CCCCCCHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT-------------SAEELGWSRRINVIKG 69 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-------------~~~~~~~~~~~~~~~~ 69 (228)
+.+.+|+.++..++||||+++++++......++++||+.+++|.+++.... ....++...+..++.|
T Consensus 53 ~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q 132 (283)
T cd05091 53 EEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQ 132 (283)
T ss_pred HHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999985321 1223778888999999
Q ss_pred HHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhh
Q 040501 70 IAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDV 147 (228)
Q Consensus 70 l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di 147 (228)
++.||.|||+. |++||||||+||+++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||
T Consensus 133 l~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 209 (283)
T cd05091 133 IAAGMEFLSSH---HVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDI 209 (283)
T ss_pred HHHHHHHHHHc---CccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhH
Confidence 99999999999 9999999999999999999999999988765432211 122345678999999988889999999
Q ss_pred hhHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHh
Q 040501 148 YSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226 (228)
Q Consensus 148 wslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 226 (228)
||||+++|+|++ |..||... ........+......... ..++..+.+++.+||+.+|.+|||+++++..|
T Consensus 210 ~slG~~l~el~~~g~~p~~~~------~~~~~~~~i~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l 280 (283)
T cd05091 210 WSYGVVLWEVFSYGLQPYCGY------SNQDVIEMIRNRQVLPCP---DDCPAWVYTLMLECWNEFPSRRPRFKDIHSRL 280 (283)
T ss_pred HHHHHHHHHHHcCCCCCCCCC------CHHHHHHHHHcCCcCCCC---CCCCHHHHHHHHHHhCCCcccCCCHHHHHHHh
Confidence 999999999998 88887532 222334444343332222 24667789999999999999999999999998
Q ss_pred h
Q 040501 227 C 227 (228)
Q Consensus 227 ~ 227 (228)
+
T Consensus 281 ~ 281 (283)
T cd05091 281 R 281 (283)
T ss_pred h
Confidence 6
No 115
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.1e-39 Score=251.23 Aligned_cols=214 Identities=24% Similarity=0.413 Sum_probs=171.2
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+.+|+++++++ +|+||+++++++......|++|||+.+++|.+++..... ..+++.++..++.|++.||.|||+.
T Consensus 83 ~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~- 160 (302)
T cd05055 83 EALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASK- 160 (302)
T ss_pred HHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 4688999999999 799999999999999999999999999999999875332 2378999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
+++|+||+|+||+++.++.++++|||.+......... .....++..|+|||.+.+..++.++||||+|+++|++++
T Consensus 161 --~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t 238 (302)
T cd05055 161 --NCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 238 (302)
T ss_pred --CeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998765433211 112345678999999988889999999999999999998
Q ss_pred -CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 160 -GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 160 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|..||..... ............... .....+..+.+++.+||+.+|.+|||+.++++.|++
T Consensus 239 ~g~~p~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 239 LGSNPYPGMPV------DSKFYKLIKEGYRMA--QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CCCCCcCCCCc------hHHHHHHHHcCCcCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 9999754321 111111111111110 011234578999999999999999999999999874
No 116
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.2e-40 Score=247.55 Aligned_cols=209 Identities=26% Similarity=0.390 Sum_probs=167.3
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+.+|+.+++.++||||+++++.+......|+++||+.+++|.+++.... .+++.+++.++.|++.++.|||+.
T Consensus 52 ~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~--- 125 (267)
T cd06645 52 VVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSK--- 125 (267)
T ss_pred HHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 46789999999999999999999999999999999999999999986543 388999999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccc---cCCcccchhhhhHHHHHHHHHhC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAY---TMKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~~~~~g 160 (228)
|++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+. ...++.++|+||||+++|+|++|
T Consensus 126 ~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~ 205 (267)
T cd06645 126 GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAEL 205 (267)
T ss_pred CeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcC
Confidence 999999999999999999999999999876654333334456888999999874 34578899999999999999999
Q ss_pred CCCccccccccCCCchhhhhhhcCCCC-CCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRL-PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
..||....... .......... +........++..+.+++.+||..+|.+|||++++++
T Consensus 206 ~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 206 QPPMFDLHPMR------ALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CCCcccccchh------hHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 99975332111 1111111111 1111111234567889999999999999999999875
No 117
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=8.8e-40 Score=250.52 Aligned_cols=214 Identities=26% Similarity=0.445 Sum_probs=171.0
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCC---------------------CCCCCCHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT---------------------SAEELGWS 61 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---------------------~~~~~~~~ 61 (228)
+++.+|+++++.++||||+++++.+......++++||+.+++|.+++.... ....++..
T Consensus 48 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 127 (290)
T cd05045 48 RDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMG 127 (290)
T ss_pred HHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHH
Confidence 467889999999999999999999999999999999999999999876421 11247889
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccC
Q 040501 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTM 139 (228)
Q Consensus 62 ~~~~~~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~ 139 (228)
+++.++.|++.||.|||+. |++|+||+|+||++++++.++|+|||.+......... .....++..|+|||.+.+.
T Consensus 128 ~~~~i~~~i~~~l~~LH~~---~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~ 204 (290)
T cd05045 128 DLISFAWQISRGMQYLAEM---KLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDH 204 (290)
T ss_pred HHHHHHHHHHHHHHHHHHC---CeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccC
Confidence 9999999999999999999 9999999999999999999999999998755332221 1223456689999998888
Q ss_pred CcccchhhhhHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCC
Q 040501 140 KVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPN 218 (228)
Q Consensus 140 ~~~~~~DiwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 218 (228)
.++.++||||||+++|+|++ |..||.... ................ ....+.++.+++.+||+.+|.+|||
T Consensus 205 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~cl~~~P~~Rp~ 275 (290)
T cd05045 205 IYTTQSDVWSFGVLLWEIVTLGGNPYPGIA------PERLFNLLKTGYRMER---PENCSEEMYNLMLTCWKQEPDKRPT 275 (290)
T ss_pred CcchHhHHHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHhCCCCCCC---CCCCCHHHHHHHHHHccCCcccCCC
Confidence 89999999999999999998 999975332 1122222211111111 1245567899999999999999999
Q ss_pred HHHHHHHhhC
Q 040501 219 MQTICQLLCK 228 (228)
Q Consensus 219 ~~~il~~l~~ 228 (228)
++++++.|++
T Consensus 276 ~~~i~~~l~~ 285 (290)
T cd05045 276 FADISKELEK 285 (290)
T ss_pred HHHHHHHHHH
Confidence 9999999874
No 118
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-40 Score=263.22 Aligned_cols=202 Identities=23% Similarity=0.355 Sum_probs=173.5
Q ss_pred ChHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 040501 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH 79 (228)
Q Consensus 1 ~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 79 (228)
|.+..+.|.+++... +||.++.++..|+..+++|+||||+.||++..+++. ..+++.++..++..|+.||.|||+
T Consensus 411 ~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~----~~F~e~rarfyaAev~l~L~fLH~ 486 (694)
T KOG0694|consen 411 EVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHT----DVFSEPRARFYAAEVVLGLQFLHE 486 (694)
T ss_pred cHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEEEEec----ccccHHHHHHHHHHHHHHHHHHHh
Confidence 356778899999888 599999999999999999999999999996555442 239999999999999999999999
Q ss_pred CCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 80 DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 80 ~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
. ||++||||.+||+++.+|.+||.|||+++..........+++|||.|+|||++.+..|+.++|.||||++||+|+.
T Consensus 487 ~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~ 563 (694)
T KOG0694|consen 487 N---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLV 563 (694)
T ss_pred c---CceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHc
Confidence 9 9999999999999999999999999999976655556677999999999999999999999999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCH
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM 219 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 219 (228)
|..||... +..+....++..... .....+.+...+++++|.+||.+|.-+
T Consensus 564 Gq~PF~gd------dEee~FdsI~~d~~~----yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 564 GESPFPGD------DEEEVFDSIVNDEVR----YPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCCCCCC------CHHHHHHHHhcCCCC----CCCcccHHHHHHHHHHhccCcccccCC
Confidence 99997643 344555555444332 124566688999999999999999765
No 119
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.1e-39 Score=250.84 Aligned_cols=212 Identities=25% Similarity=0.375 Sum_probs=168.5
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCC-------------CCCCCCHHHHHHHHH
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT-------------SAEELGWSRRINVIK 68 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-------------~~~~~~~~~~~~~~~ 68 (228)
+.+.+|++++.++ +||||+++++++......|+++||+++++|.+++.... ....++...++.++.
T Consensus 47 ~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 126 (297)
T cd05089 47 RDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFAS 126 (297)
T ss_pred HHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHH
Confidence 4678899999999 79999999999999899999999999999999986532 112478899999999
Q ss_pred HHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhh
Q 040501 69 GIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVY 148 (228)
Q Consensus 69 ~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 148 (228)
|++.||++||+. |++|+||||+||+++.++.++|+|||++....... .......+..|+|||.+.+..++.++|||
T Consensus 127 qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw 202 (297)
T cd05089 127 DVATGMQYLSEK---QFIHRDLAARNVLVGENLASKIADFGLSRGEEVYV-KKTMGRLPVRWMAIESLNYSVYTTKSDVW 202 (297)
T ss_pred HHHHHHHHHHHC---CcccCcCCcceEEECCCCeEEECCcCCCcccccee-ccCCCCcCccccCchhhccCCCCchhhHH
Confidence 999999999999 99999999999999999999999999886432111 11112234579999999888899999999
Q ss_pred hHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 149 SFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 149 slG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|||+++|+|++ |..||..... ................ ..++.++.+++.+||+.+|.+|||++++++.|+
T Consensus 203 SlG~il~el~t~g~~pf~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 273 (297)
T cd05089 203 SFGVLLWEIVSLGGTPYCGMTC------AELYEKLPQGYRMEKP---RNCDDEVYELMRQCWRDRPYERPPFAQISVQLS 273 (297)
T ss_pred HHHHHHHHHHcCCCCCCCCCCH------HHHHHHHhcCCCCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 99999999997 9999854322 2222223222211111 235567899999999999999999999988875
No 120
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.2e-39 Score=244.64 Aligned_cols=212 Identities=25% Similarity=0.468 Sum_probs=169.9
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+++.+|++++++++|+|++++++++.. ...+++||++.+++|.+++.... ...+++..+..++.|++.||.|||+.
T Consensus 46 ~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~-- 121 (260)
T cd05069 46 EAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMGKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERM-- 121 (260)
T ss_pred HHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 568899999999999999999988754 56889999999999999987543 23478899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-C
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-G 160 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g 160 (228)
|++|+||+|+||++++++.++|+|||.+......... .....++..|+|||...+..++.++|+||||+++|++++ |
T Consensus 122 -~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g 200 (260)
T cd05069 122 -NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKG 200 (260)
T ss_pred -CEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999998765433221 122345667999999988889999999999999999999 8
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
..||..... ......+........ ....+..+.+++.+||+.||.+|||++++++.|++
T Consensus 201 ~~p~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 201 RVPYPGMVN------REVLEQVERGYRMPC---PQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCCCCCCH------HHHHHHHHcCCCCCC---CcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 999764321 122222222211111 12456679999999999999999999999999874
No 121
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.9e-39 Score=245.01 Aligned_cols=213 Identities=25% Similarity=0.470 Sum_probs=170.8
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+++.+|+.++++++|++++++++++.. ...|++||++.+++|.+++..... ..+++.+++.++.|++.||.|||+.
T Consensus 45 ~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~- 121 (260)
T cd05070 45 PESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIERM- 121 (260)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 4578999999999999999999998754 568899999999999999875432 3478999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
|++|+||+|+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.++|+||||+++|++++
T Consensus 122 --~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~ 199 (260)
T cd05070 122 --NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTK 199 (260)
T ss_pred --CcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhc
Confidence 9999999999999999999999999999765433221 112234567999999888889999999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|..||.... .......+......+.. ...+..+.+++.+||..+|.+|||++++.+.|++
T Consensus 200 g~~p~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 200 GRVPYPGMN------NREVLEQVERGYRMPCP---QDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCCCCCC------HHHHHHHHHcCCCCCCC---CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 899985422 22222333222111111 2455679999999999999999999999999874
No 122
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.7e-39 Score=244.84 Aligned_cols=210 Identities=27% Similarity=0.428 Sum_probs=169.0
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.+.|+||+++++++. ....+++||++.+++|.+++.... .+++..++.++.|++.++++||+.
T Consensus 41 ~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~-- 114 (257)
T cd05060 41 KEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESK-- 114 (257)
T ss_pred HHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhc--
Confidence 56889999999999999999999876 456899999999999999997654 388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCcee---cccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE---FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
+++|+||+|+||+++.++.++|+|||.+............ ..++..|+|||.+.+..++.++|+||||+++|++++
T Consensus 115 -~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~ 193 (257)
T cd05060 115 -HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFS 193 (257)
T ss_pred -CeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHc
Confidence 9999999999999999999999999998866543332111 122457999999988889999999999999999997
Q ss_pred -CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 160 -GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 160 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|..||..... ......+....... ....++..+.+++.+||..+|.+|||+.++++.|++
T Consensus 194 ~g~~p~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 194 YGAKPYGEMKG------AEVIAMLESGERLP---RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred CCCCCcccCCH------HHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 9999854321 11222221111111 112345678999999999999999999999999874
No 123
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=6.5e-40 Score=250.57 Aligned_cols=218 Identities=19% Similarity=0.248 Sum_probs=166.9
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.++++++|+||+++++++..+...|+||||+. ++|.+++........++...+..++.|++.||.|||+.
T Consensus 44 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-- 120 (285)
T cd07861 44 STAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR-- 120 (285)
T ss_pred HHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 467889999999999999999999999999999999997 57888876544445589999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++|+|||++..............+++.|+|||.+.+. .++.++|+||||+++|++++|.
T Consensus 121 -~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~ 199 (285)
T cd07861 121 -RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKK 199 (285)
T ss_pred -CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999999999987654433333334567889999987654 4688999999999999999999
Q ss_pred CCccccccccCCCc------------------hhhhhhhcCC-CCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHH
Q 040501 162 HPRDFLSNVSSSNP------------------NILVNEMLDP-RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222 (228)
Q Consensus 162 ~p~~~~~~~~~~~~------------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i 222 (228)
.||........... .......... ............+.++.++|.+||..||.+|||+.++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~l 279 (285)
T cd07861 200 PLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKA 279 (285)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence 99864321100000 0000000000 0000011122356678899999999999999999998
Q ss_pred HH
Q 040501 223 CQ 224 (228)
Q Consensus 223 l~ 224 (228)
++
T Consensus 280 l~ 281 (285)
T cd07861 280 LN 281 (285)
T ss_pred hc
Confidence 75
No 124
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=8.6e-40 Score=251.14 Aligned_cols=220 Identities=22% Similarity=0.385 Sum_probs=168.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC---------CCCCCHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS---------AEELGWSRRINVIKGIAHA 73 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~ 73 (228)
+.|.+|++++++++|+|++++++++......++||||+.+++|.+++..... ...+++.+++.++.|++.|
T Consensus 62 ~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~a 141 (295)
T cd05097 62 NDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASG 141 (295)
T ss_pred HHHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999998864321 1236788899999999999
Q ss_pred HHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHH
Q 040501 74 LSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFG 151 (228)
Q Consensus 74 l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG 151 (228)
|.|||+. |++|+||||+||+++.++.++|+|||++......... .....++..|+|||.+.+..++.++|+||||
T Consensus 142 l~~lH~~---~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG 218 (295)
T cd05097 142 MKYLASL---NFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFG 218 (295)
T ss_pred HHHHHhc---CeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHH
Confidence 9999999 9999999999999999999999999998765332211 1123346789999999888899999999999
Q ss_pred HHHHHHHh--CCCCccccccccCCCchhhhhhhcCCC-CCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 152 VLALEVIK--GKHPRDFLSNVSSSNPNILVNEMLDPR-LPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 152 ~~l~~~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
+++|+|++ +..||....... ............ ...........+..+.+++.+||+.||.+|||++++++.|++
T Consensus 219 ~~l~el~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 219 VTLWEMFTLCKEQPYSLLSDEQ---VIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHHHHHcCCCCCCcccChHH---HHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 99999988 566765322111 000000000000 000001112345679999999999999999999999999874
No 125
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=7.5e-40 Score=253.52 Aligned_cols=204 Identities=25% Similarity=0.344 Sum_probs=164.9
Q ss_pred HHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 4 EFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 4 ~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
.+..|..+++.. +||||+++++++.+....|+||||+.+++|.+++.... .+++.++..++.|++.||.|||+.
T Consensus 41 ~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~LH~~-- 115 (316)
T cd05619 41 CTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCH---KFDLPRATFYAAEIICGLQFLHSK-- 115 (316)
T ss_pred HHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 456788888765 89999999999999999999999999999999987543 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|+||+||++|+|++|..
T Consensus 116 -~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~ 194 (316)
T cd05619 116 -GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQS 194 (316)
T ss_pred -CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCC
Confidence 9999999999999999999999999998754333333344568899999999998889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHH-HHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQ-TIC 223 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~-~il 223 (228)
||.... .......+..... ..+ ...+.++.+++.+||+.||.+||++. +++
T Consensus 195 pf~~~~------~~~~~~~i~~~~~-~~~---~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 195 PFHGHD------EEELFQSIRMDNP-CYP---RWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred CCCCCC------HHHHHHHHHhCCC-CCC---ccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 986432 1222222211111 111 12455688999999999999999997 554
No 126
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.9e-39 Score=245.29 Aligned_cols=208 Identities=24% Similarity=0.335 Sum_probs=168.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++||||+++++++..+...++++|++++++|.+++.... .++...+..++.|++.||.+||+.
T Consensus 49 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~-- 123 (263)
T cd06625 49 NALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSN-- 123 (263)
T ss_pred HHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 467889999999999999999999999999999999999999999887543 378889999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC---ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN---WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
|++|+||+|+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.++|+||||+++|++++
T Consensus 124 -~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 202 (263)
T cd06625 124 -MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLT 202 (263)
T ss_pred -CeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHh
Confidence 9999999999999999999999999998754322111 123456788999999998889999999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCC-CCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDP-RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
|+.||..... .......... ..... ....+..+.+++.+||..+|.+|||+.++++.
T Consensus 203 g~~p~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 203 EKPPWAEFEA------MAAIFKIATQPTNPQL---PSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CCCCccccch------HHHHHHHhccCCCCCC---CccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 9999753221 1111111111 11111 12455678999999999999999999999864
No 127
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.1e-39 Score=245.66 Aligned_cols=213 Identities=26% Similarity=0.481 Sum_probs=172.2
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++.+.+|+.++++++||||+++++++..+...|++|||+++++|.+++..... .++..+++.++.|++.|+.+||+.
T Consensus 49 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~- 125 (267)
T cd05066 49 RRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDG--QFTVIQLVGMLRGIASGMKYLSDM- 125 (267)
T ss_pred HHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 35788999999999999999999999999999999999999999999976542 378899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCce---ecccccceeCCcccccCCcccchhhhhHHHHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~ 158 (228)
|++|+||+|+||+++.++.++++|||.+........... ...++..|++||.+.+..++.++|+||||+++|+++
T Consensus 126 --~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell 203 (267)
T cd05066 126 --GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 203 (267)
T ss_pred --CEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHh
Confidence 999999999999999999999999999886653322211 112345799999998888999999999999999988
Q ss_pred h-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 159 K-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 159 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
+ |..||..... ......+......+. ....+..+.+++.+||+.+|.+|||+.++++.|++
T Consensus 204 ~~g~~p~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 204 SYGERPYWEMSN------QDVIKAIEEGYRLPA---PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred cCCCCCcccCCH------HHHHHHHhCCCcCCC---CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 6 9999753321 112222222211111 12345678999999999999999999999999874
No 128
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.3e-39 Score=250.33 Aligned_cols=221 Identities=23% Similarity=0.393 Sum_probs=169.4
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC--------CCCCCHHHHHHHHHHHHHH
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS--------AEELGWSRRINVIKGIAHA 73 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~ 73 (228)
++.+.+|+++++.++|+||+++++++..+...+++|||+.+++|.+++..... ...+++.+++.++.|++.|
T Consensus 63 ~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 142 (296)
T cd05095 63 RNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASG 142 (296)
T ss_pred HHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999999999999875331 1236778899999999999
Q ss_pred HHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHH
Q 040501 74 LSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFG 151 (228)
Q Consensus 74 l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG 151 (228)
|+|||+. |++|+||||+||+++.++.++|+|||.+......... .....++..|++||...+..++.++|+||||
T Consensus 143 l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG 219 (296)
T cd05095 143 MKYLSSL---NFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFG 219 (296)
T ss_pred HHHHHHC---CeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHH
Confidence 9999999 9999999999999999999999999998765332211 1122345689999988888899999999999
Q ss_pred HHHHHHHh--CCCCccccccccCCCchhhhhhhcCCC-CCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 152 VLALEVIK--GKHPRDFLSNVSSSNPNILVNEMLDPR-LPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 152 ~~l~~~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
+++|+|++ |..||......... .......... ..........++..+.+++.+||+.||.+|||+.++++.|++
T Consensus 220 ~~l~el~~~~~~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 220 VTLWEILTLCKEQPYSQLSDEQVI---ENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHHHhCCCCCccccChHHHH---HHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 99999998 67787533211100 0000000000 000000012344678999999999999999999999999875
No 129
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.4e-40 Score=260.34 Aligned_cols=209 Identities=22% Similarity=0.255 Sum_probs=166.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+||+++++++..+...|+||||+.+++|.+++.... .+++..+..++.|++.||.|||+.
T Consensus 46 ~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~-- 120 (364)
T cd05599 46 AHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKL-- 120 (364)
T ss_pred HHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 346789999999999999999999999999999999999999999987543 388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--------------------------------------ceec
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--------------------------------------WTEF 124 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--------------------------------------~~~~ 124 (228)
|++||||||+||+++.++.++|+|||++......... ....
T Consensus 121 -~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (364)
T cd05599 121 -GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYST 199 (364)
T ss_pred -CeEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhccccccccc
Confidence 9999999999999999999999999988754321100 0123
Q ss_pred ccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHH
Q 040501 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEV 204 (228)
Q Consensus 125 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 204 (228)
.|++.|+|||++.+..++.++|||||||++|+|++|..||..... ......+...............+.++.++
T Consensus 200 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~------~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 273 (364)
T cd05599 200 VGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNP------QETYRKIINWKETLQFPDEVPLSPEAKDL 273 (364)
T ss_pred ccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCH------HHHHHHHHcCCCccCCCCCCCCCHHHHHH
Confidence 588999999999988899999999999999999999999864322 22222222211111101112345678899
Q ss_pred HHHhhccCCCCCCC---HHHHHH
Q 040501 205 AFLCLDNNPESRPN---MQTICQ 224 (228)
Q Consensus 205 i~~~l~~~p~~Rpt---~~~il~ 224 (228)
|.+|+. +|.+|++ ++++++
T Consensus 274 i~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 274 IKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred HHHHcc-CHhhcCCCCCHHHHhc
Confidence 999996 9999998 888765
No 130
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.6e-39 Score=246.69 Aligned_cols=213 Identities=24% Similarity=0.380 Sum_probs=168.3
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCC-------------CCCCCCHHHHHHHHH
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT-------------SAEELGWSRRINVIK 68 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-------------~~~~~~~~~~~~~~~ 68 (228)
+.+.+|+++++++ +||||+++++++......|++|||+++++|.+++.... ....++..++..++.
T Consensus 40 ~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 119 (270)
T cd05047 40 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 119 (270)
T ss_pred HHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHH
Confidence 4677899999999 79999999999999999999999999999999986532 122478899999999
Q ss_pred HHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhh
Q 040501 69 GIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVY 148 (228)
Q Consensus 69 ~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 148 (228)
|++.||+|||+. |++|+||||+||+++.++.++++|||++...... ........+..|+|||++....++.++|+|
T Consensus 120 ~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~ 195 (270)
T cd05047 120 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVW 195 (270)
T ss_pred HHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCCCccccchh-hhccCCCCccccCChHHHccCCCCchhhHH
Confidence 999999999999 9999999999999999999999999987532211 111112235579999999888899999999
Q ss_pred hHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 149 SFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 149 slG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|||+++|+|++ |..||..... ......+........ ....+.++.+++.+||+.||.+|||+.++++.|+
T Consensus 196 slG~il~el~~~g~~pf~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 266 (270)
T cd05047 196 SYGVLLWEIVSLGGTPYCGMTC------AELYEKLPQGYRLEK---PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 266 (270)
T ss_pred HHHHHHHHHHcCCCCCccccCH------HHHHHHHhCCCCCCC---CCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHH
Confidence 99999999997 9999854321 122222222111111 1234457889999999999999999999999886
Q ss_pred C
Q 040501 228 K 228 (228)
Q Consensus 228 ~ 228 (228)
+
T Consensus 267 ~ 267 (270)
T cd05047 267 R 267 (270)
T ss_pred H
Confidence 3
No 131
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.9e-39 Score=246.01 Aligned_cols=215 Identities=27% Similarity=0.433 Sum_probs=171.7
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCC----CCCCCCHHHHHHHHHHHHHHHHHh
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT----SAEELGWSRRINVIKGIAHALSYL 77 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~l 77 (228)
...+.+|+++++.++||||+++++++......++++|++++++|.+++.... ....+++.+++.++.|++.|+.||
T Consensus 43 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 122 (269)
T cd05044 43 KKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL 122 (269)
T ss_pred HHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999899999999999999999987532 223478899999999999999999
Q ss_pred hhCCCCCeeecCCCCCceEEcCCC-----ceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhH
Q 040501 78 HHDCIPPIVHRDISSKNVLLDLEY-----EAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSF 150 (228)
Q Consensus 78 h~~~~~~i~h~di~p~nil~~~~~-----~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diwsl 150 (228)
|+. +++|+||+|+||+++.++ .++++|||++......... .....++..|+|||.+.+..++.++|||||
T Consensus 123 H~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl 199 (269)
T cd05044 123 EQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSF 199 (269)
T ss_pred HhC---CcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHH
Confidence 999 999999999999999887 8999999998755322211 122344678999999988889999999999
Q ss_pred HHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 151 GVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 151 G~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|+++|+|++ |..||..... ......+....... .....+..+.+++.+||..+|.+|||++++++.|++
T Consensus 200 G~il~ellt~g~~p~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 200 GVLMWEILTLGQQPYPALNN------QEVLQHVTAGGRLQ---KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred HHHHHHHHHcCCCCCcccCH------HHHHHHHhcCCccC---CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 999999998 9999863321 11222221111111 112456678999999999999999999999999875
No 132
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.8e-39 Score=247.81 Aligned_cols=210 Identities=23% Similarity=0.373 Sum_probs=167.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+||+++++++......|+++||+++++|..++.... ..+++..+..++.|++.||.|||+.
T Consensus 47 ~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~-- 122 (282)
T cd06643 47 EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHEN-- 122 (282)
T ss_pred HHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 467889999999999999999999999999999999999999988876432 2388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccc-----cCCcccchhhhhHHHHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAY-----TMKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DiwslG~~l~~~ 157 (228)
|++|+||+|+||+++.++.++++|||++..............++..|+|||.+. +..++.++|+||+|+++|+|
T Consensus 123 -~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el 201 (282)
T cd06643 123 -KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 201 (282)
T ss_pred -CeeecCCCcccEEEccCCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHH
Confidence 999999999999999999999999999876543333333456788999999874 34467899999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++|..||..... ............+... ....++.++.++|.+||+.||.+|||+.++++
T Consensus 202 ~~g~~p~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 202 AQIEPPHHELNP------MRVLLKIAKSEPPTLA-QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred ccCCCCccccCH------HHHHHHHhhcCCCCCC-CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 999999754321 1122222211111111 11234567899999999999999999999875
No 133
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.5e-40 Score=259.16 Aligned_cols=210 Identities=22% Similarity=0.264 Sum_probs=168.0
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++|+||+++++++......|+||||+.+++|.+++.... ..+++..+..++.|++.||.|||+.
T Consensus 46 ~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~-- 121 (330)
T cd05601 46 SFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQM-- 121 (330)
T ss_pred HHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 457789999999999999999999999999999999999999999997653 2388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccc------cCCcccchhhhhHHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAY------TMKVTAKCDVYSFGVLAL 155 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~------~~~~~~~~DiwslG~~l~ 155 (228)
|++||||||+||+++.++.++|+|||++......... .....+++.|+|||++. +..++.++||||||+++|
T Consensus 122 -~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~ 200 (330)
T cd05601 122 -GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAY 200 (330)
T ss_pred -CeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceee
Confidence 9999999999999999999999999999866533322 23346889999999886 345678999999999999
Q ss_pred HHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 156 EVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+|++|..||..... ......+...............+.++.+++.+||. +|.+|||+.++++
T Consensus 201 el~~g~~Pf~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 201 EMIYGRSPFHEGTS------AKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred eeccCCCCCCCCCH------HHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 99999999864322 12222222211110011112456678899999998 9999999999874
No 134
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.6e-40 Score=257.18 Aligned_cols=202 Identities=23% Similarity=0.327 Sum_probs=163.7
Q ss_pred HHHHHHH-HHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 4 EFLREIT-VLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 4 ~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
.+..|.. +++.++||||+++++.+......|+||||+.+++|..++.... .+++..+..++.|++.||.|||+.
T Consensus 41 ~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~-- 115 (325)
T cd05604 41 HIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRER---SFPEPRARFYAAEIASALGYLHSI-- 115 (325)
T ss_pred HHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 3455554 4667899999999999999999999999999999988886543 388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|||||||++|+|++|..
T Consensus 116 -givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~ 194 (325)
T cd05604 116 -NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLP 194 (325)
T ss_pred -CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCC
Confidence 9999999999999999999999999998754333333344578999999999998889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQT 221 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 221 (228)
||.... .......+........ ...+..+.+++.+||+.+|.+||++.+
T Consensus 195 pf~~~~------~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 195 PFYCRD------VAEMYDNILHKPLVLR----PGASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred CCCCCC------HHHHHHHHHcCCccCC----CCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 985322 2223333333222111 234557889999999999999999863
No 135
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=6e-40 Score=250.83 Aligned_cols=211 Identities=23% Similarity=0.247 Sum_probs=168.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.+|+.++++++|+||+++++.+..+...++||||+.+++|.+++.... ...+++..+..++.|++.|+.|||+.
T Consensus 45 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-- 121 (285)
T cd05605 45 AMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRE-- 121 (285)
T ss_pred HHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 346789999999999999999999999999999999999999998876432 23488999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||++++++.++|+|||++....... ......++..|+|||.+.+..++.++|+||+|+++|++++|..
T Consensus 122 -~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~ 199 (285)
T cd05605 122 -RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE-TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKS 199 (285)
T ss_pred -CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCC
Confidence 99999999999999999999999999987654222 2233467889999999988889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP-----NMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~il~ 224 (228)
||....... ............... .....+..+.+++.+||+.||.+|| +++++++
T Consensus 200 pf~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 200 PFRQRKEKV---KREEVERRVKEDQEE---YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred CCCCCchhh---HHHHHHHHhhhcccc---cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 986432111 101111111111111 1123566789999999999999999 7888864
No 136
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=9.7e-40 Score=251.70 Aligned_cols=212 Identities=24% Similarity=0.373 Sum_probs=168.2
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC-------------CCCCCHHHHHHHHH
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-------------AEELGWSRRINVIK 68 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~ 68 (228)
+.+.+|++++.++ +|+||+++++++..+...|+++||+++++|.+++..... ...++..+++.++.
T Consensus 52 ~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 131 (303)
T cd05088 52 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 131 (303)
T ss_pred HHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHH
Confidence 4678899999999 899999999999999999999999999999999875321 23478899999999
Q ss_pred HHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhh
Q 040501 69 GIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVY 148 (228)
Q Consensus 69 ~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 148 (228)
|++.|++|||+. |++||||||+||+++.++.++|+|||++....... .......+..|+|||.+.+..++.++|||
T Consensus 132 qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 207 (303)
T cd05088 132 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVW 207 (303)
T ss_pred HHHHHHHHHHhC---CccccccchheEEecCCCcEEeCccccCcccchhh-hcccCCCcccccCHHHHhccCCcccccch
Confidence 999999999999 99999999999999999999999999886322111 11112335679999998888889999999
Q ss_pred hHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 149 SFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 149 slG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|||+++|++++ |..||..... ............... ....+.++.+++.+||+.+|.+|||+.++++.|+
T Consensus 208 slG~il~ellt~g~~p~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~ 278 (303)
T cd05088 208 SYGVLLWEIVSLGGTPYCGMTC------AELYEKLPQGYRLEK---PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 278 (303)
T ss_pred hhhhHHHHHHhcCCCCcccCCh------HHHHHHHhcCCcCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 99999999998 9999853322 122222222111111 1234567899999999999999999999998875
No 137
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1e-39 Score=253.79 Aligned_cols=201 Identities=22% Similarity=0.302 Sum_probs=164.1
Q ss_pred HHHHHHHHHHhccCC-CccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEIRH-RNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+..|.+++..+.| ++|+++++++...+..|+||||+.+++|.+++.... .+++..+..++.|++.||.|||+.
T Consensus 45 ~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~- 120 (324)
T cd05587 45 ECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSK- 120 (324)
T ss_pred HHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 456789999999965 568889999999999999999999999999886543 278899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|+||+||++|+|++|.
T Consensus 121 --~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~ 198 (324)
T cd05587 121 --GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 198 (324)
T ss_pred --CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCC
Confidence 999999999999999999999999999875433333344567899999999999888999999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM 219 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 219 (228)
.||.... .......+....... ....+.++.+++.+||..||.+|++.
T Consensus 199 ~pf~~~~------~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 199 PPFDGED------EDELFQSIMEHNVSY----PKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCCCCCC------HHHHHHHHHcCCCCC----CCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 9985322 222333333222211 12345678899999999999999986
No 138
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.8e-39 Score=245.05 Aligned_cols=213 Identities=27% Similarity=0.484 Sum_probs=171.5
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++.+..|+++++.++|+||+++++++......|++||++++++|.+++.... ..+++.++..++.|++.|++|||+.
T Consensus 50 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~- 126 (268)
T cd05063 50 RQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDM- 126 (268)
T ss_pred HHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 3568899999999999999999999999999999999999999999987543 2378899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCce---ecccccceeCCcccccCCcccchhhhhHHHHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~ 158 (228)
|++|+||+|+||+++.++.++++|||++........... ....+..|+|||.+.+..++.++|+||||+++|+++
T Consensus 127 --~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell 204 (268)
T cd05063 127 --NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVM 204 (268)
T ss_pred --CeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHH
Confidence 999999999999999999999999999876543222111 112345799999998888899999999999999999
Q ss_pred h-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 159 K-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 159 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
+ |..||.... .......+......+. ....+..+.+++.+||..+|.+||++.++++.|++
T Consensus 205 ~~g~~p~~~~~------~~~~~~~i~~~~~~~~---~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 205 SFGERPYWDMS------NHEVMKAINDGFRLPA---PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred hCCCCCCCcCC------HHHHHHHHhcCCCCCC---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 7 999975322 1222233222211111 12345678999999999999999999999999874
No 139
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.4e-39 Score=249.99 Aligned_cols=208 Identities=27% Similarity=0.431 Sum_probs=168.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++|+||+++++.+..+...|+|+||+.+++|.+++... .++..++..++.|++.||.|||+.
T Consensus 62 ~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~-- 135 (296)
T cd06654 62 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN-- 135 (296)
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 46788999999999999999999999999999999999999999998643 278889999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++|+|||.+..............+++.|+|||.+.+..++.++|+||||+++|+|++|..
T Consensus 136 -gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~ 214 (296)
T cd06654 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214 (296)
T ss_pred -CcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999988765433333334567889999999988888999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||....... .......... +.. ......+..+.+++.+||..+|.+|||+.++++
T Consensus 215 pf~~~~~~~-----~~~~~~~~~~-~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 215 PYLNENPLR-----ALYLIATNGT-PEL-QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CCCCCCHHH-----hHHHHhcCCC-CCC-CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 985332111 1111111111 111 111245567889999999999999999999986
No 140
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.3e-39 Score=258.52 Aligned_cols=216 Identities=24% Similarity=0.396 Sum_probs=170.6
Q ss_pred hHHHHHHHHHHhccC-CCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC--------------------------
Q 040501 2 KKEFLREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-------------------------- 54 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-------------------------- 54 (228)
++.+.+|+++++++. ||||+++++++......|+||||+.+++|.+++.....
T Consensus 84 ~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T cd05105 84 KQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADEST 163 (400)
T ss_pred HHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccc
Confidence 457889999999995 99999999999999999999999999999988754210
Q ss_pred -------------------------------------------------------------------CCCCCHHHHHHHH
Q 040501 55 -------------------------------------------------------------------AEELGWSRRINVI 67 (228)
Q Consensus 55 -------------------------------------------------------------------~~~~~~~~~~~~~ 67 (228)
...+++..+..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~ 243 (400)
T cd05105 164 RSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFT 243 (400)
T ss_pred cchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHH
Confidence 1236778888999
Q ss_pred HHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccch
Q 040501 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKC 145 (228)
Q Consensus 68 ~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~ 145 (228)
.|++.||+|||+. +++|+||||+||+++.++.++|+|||++......... .....++..|+|||.+.+..++.++
T Consensus 244 ~qi~~aL~~LH~~---~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 320 (400)
T cd05105 244 YQVARGMEFLASK---NCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLS 320 (400)
T ss_pred HHHHHHHHHHHhC---CeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchh
Confidence 9999999999999 9999999999999999999999999998765432221 1223456789999999888899999
Q ss_pred hhhhHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 146 DVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 146 DiwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||||||+++|+|++ |..||...... ......+........ ....+..+.+++.+||+.+|.+|||+.++.+
T Consensus 321 DiwSlGvil~ellt~g~~P~~~~~~~-----~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 321 DVWSYGILLWEIFSLGGTPYPGMIVD-----STFYNKIKSGYRMAK---PDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred hHHHHHHHHHHHHHCCCCCCcccchh-----HHHHHHHhcCCCCCC---CccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 99999999999997 99997643211 111111111111111 1245567899999999999999999999999
Q ss_pred HhhC
Q 040501 225 LLCK 228 (228)
Q Consensus 225 ~l~~ 228 (228)
.|++
T Consensus 393 ~l~~ 396 (400)
T cd05105 393 IVES 396 (400)
T ss_pred HHHH
Confidence 8864
No 141
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-39 Score=249.87 Aligned_cols=214 Identities=22% Similarity=0.390 Sum_probs=171.5
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC-------------CCCCCHHHHHHHHH
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-------------AEELGWSRRINVIK 68 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~ 68 (228)
+.+.+|+.+++.+ +|+||+++++++......|++|||+.+++|.+++..... ...+++.+++.++.
T Consensus 65 ~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (304)
T cd05101 65 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTY 144 (304)
T ss_pred HHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHH
Confidence 4678999999999 899999999999999999999999999999999875321 23477888999999
Q ss_pred HHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchh
Q 040501 69 GIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCD 146 (228)
Q Consensus 69 ~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~D 146 (228)
|++.||.|||+. |++|+||||+||+++.++.++|+|||.+......... .....++..|+|||++.+..++.++|
T Consensus 145 qi~~al~~LH~~---givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 221 (304)
T cd05101 145 QVARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD 221 (304)
T ss_pred HHHHHHHHHHHC---CeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhh
Confidence 999999999999 9999999999999999999999999998866432222 11223456799999998888999999
Q ss_pred hhhHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 147 VYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 147 iwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
|||||+++|++++ |..||.... .......+........ ...++..+.+++.+||+.+|.+|||+.++++.
T Consensus 222 i~slG~~l~el~~~g~~p~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 222 VWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLKEGHRMDK---PANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHHHHHHHHcCCCCCcccCC------HHHHHHHHHcCCcCCC---CCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 9999999999998 788865322 2222222222221111 12456678999999999999999999999999
Q ss_pred hhC
Q 040501 226 LCK 228 (228)
Q Consensus 226 l~~ 228 (228)
|++
T Consensus 293 l~~ 295 (304)
T cd05101 293 LDR 295 (304)
T ss_pred HHH
Confidence 864
No 142
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=5.1e-40 Score=255.19 Aligned_cols=201 Identities=22% Similarity=0.325 Sum_probs=161.9
Q ss_pred HHHHHHH-HHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 4 EFLREIT-VLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 4 ~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
.+..|.. +++.++|+||+++++.+......|+||||+.+++|...+.... .++..++..++.|++.||.|||+.
T Consensus 41 ~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~-- 115 (321)
T cd05603 41 HIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRER---CFLEPRARFYAAEVASAIGYLHSL-- 115 (321)
T ss_pred HHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 3455554 5778899999999999999999999999999999988886543 378888999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++||||||+||+++.++.+||+|||++..............+++.|+|||.+.+..++.++|||||||++|+|++|..
T Consensus 116 -~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~ 194 (321)
T cd05603 116 -NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLP 194 (321)
T ss_pred -CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCC
Confidence 9999999999999999999999999998754322223334568899999999988889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQ 220 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 220 (228)
||.... .......+....... + ...+..+.+++.+||+.||.+||++.
T Consensus 195 pf~~~~------~~~~~~~i~~~~~~~-~---~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 195 PFYSRD------VSQMYDNILHKPLQL-P---GGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCC------HHHHHHHHhcCCCCC-C---CCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 985322 222333333322211 1 23455788999999999999999864
No 143
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.2e-39 Score=244.00 Aligned_cols=213 Identities=25% Similarity=0.441 Sum_probs=170.1
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+.+|++++++++|+||+++++.+.. ...|++||++.+++|.+++.... ...+++..++.++.|++.||++||+.
T Consensus 45 ~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~- 121 (262)
T cd05071 45 PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM- 121 (262)
T ss_pred HHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCCCCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 3568899999999999999999998754 56899999999999999997542 23378899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
+++|+||+|+||+++.++.++|+|||.+......... .....++..|+|||...+..++.++|+||||+++|++++
T Consensus 122 --~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~ 199 (262)
T cd05071 122 --NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 199 (262)
T ss_pred --CccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcC
Confidence 9999999999999999999999999998765433221 122345667999999888889999999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|..||.... .......+........ ....+..+.+++.+||+.+|.+|||++++++.|+.
T Consensus 200 g~~p~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 200 GRVPYPGMV------NREVLDQVERGYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred CCCCCCCCC------hHHHHHHHhcCCCCCC---ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 888875432 1122222222211111 13456678999999999999999999999999873
No 144
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3e-40 Score=255.76 Aligned_cols=203 Identities=23% Similarity=0.297 Sum_probs=168.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+..|-.+|....++.||+++..|++...+|+||||++||++..++.+... +++..+..++.+++.||..+|+.
T Consensus 186 ~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~---L~e~~arfYiaE~vlAI~~iH~~-- 260 (550)
T KOG0605|consen 186 EHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDT---LTEDWARFYIAETVLAIESIHQL-- 260 (550)
T ss_pred HHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCc---CchHHHHHHHHHHHHHHHHHHHc--
Confidence 3456788899988999999999999999999999999999999999976554 89999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCC-----------------------CC-----C--------------
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-----------------------SS-----N-------------- 120 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~-----------------------~~-----~-------------- 120 (228)
|++||||||+|+|++..|++||+|||++...... .. .
T Consensus 261 -gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 339 (550)
T KOG0605|consen 261 -GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKR 339 (550)
T ss_pred -CcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHh
Confidence 9999999999999999999999999999643210 00 0
Q ss_pred -----ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhh
Q 040501 121 -----WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIR 195 (228)
Q Consensus 121 -----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (228)
.....|||.|+|||++.+.+|+..+|.|||||++|||+.|.+||-. .++......+...+.........
T Consensus 340 nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s------~tp~~T~rkI~nwr~~l~fP~~~ 413 (550)
T KOG0605|consen 340 NRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCS------ETPQETYRKIVNWRETLKFPEEV 413 (550)
T ss_pred hhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCC------CCHHHHHHHHHHHhhhccCCCcC
Confidence 0123689999999999999999999999999999999999999753 44555555555544332222333
Q ss_pred hhHHHHHHHHHHhhccCCCCCCC
Q 040501 196 GKVISIMEVAFLCLDNNPESRPN 218 (228)
Q Consensus 196 ~~~~~~~~li~~~l~~~p~~Rpt 218 (228)
..+.+..+||.+||. ||.+|.-
T Consensus 414 ~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 414 DLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred cccHHHHHHHHHHhc-CHHHhcC
Confidence 455788999999999 9999975
No 145
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=260.81 Aligned_cols=213 Identities=26% Similarity=0.425 Sum_probs=178.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.|+.|+..+++-+|.||+-+.++|..... .||.-+|.|.+|+.+++... ..+.+.+.+.|++|+++|+.|||.+
T Consensus 433 qaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK-- 507 (678)
T KOG0193|consen 433 QAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAK-- 507 (678)
T ss_pred HHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhh--
Confidence 679999999999999999999999988766 89999999999999997654 4499999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCC--CCceecccccceeCCccccc---CCcccchhhhhHHHHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEFAGTYGYVAPELAYT---MKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~~l~~~ 157 (228)
+|+|+|||..|||+.++++|||+|||++...+.-. .......+...|+|||+++. ..|+..+||||+|+++|||
T Consensus 508 -~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YEL 586 (678)
T KOG0193|consen 508 -NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYEL 586 (678)
T ss_pred -hhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHH
Confidence 99999999999999999999999999998654321 22345677889999998874 3589999999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCC-CCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRL-PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
++|..||. ..+....+..+-++.. +........++.++.+|+..||.+++++||++.+|+..|+
T Consensus 587 ltg~lPys------i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~ 651 (678)
T KOG0193|consen 587 LTGELPYS------IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLE 651 (678)
T ss_pred HhCcCCcC------CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHH
Confidence 99999975 2233334444444432 3334445677889999999999999999999999999665
No 146
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.1e-39 Score=246.90 Aligned_cols=214 Identities=26% Similarity=0.383 Sum_probs=169.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC----CCCCCHHHHHHHHHHHHHHHHHhh
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS----AEELGWSRRINVIKGIAHALSYLH 78 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh 78 (228)
..|.+|+.++++++|+||+++++++.+....+++|||+.+++|.+++..... ...+++.+++.++.|++.|+.|||
T Consensus 54 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH 133 (277)
T cd05036 54 SDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE 133 (277)
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999999999988899999999999999999875432 124789999999999999999999
Q ss_pred hCCCCCeeecCCCCCceEEcCCC---ceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHH
Q 040501 79 HDCIPPIVHRDISSKNVLLDLEY---EAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVL 153 (228)
Q Consensus 79 ~~~~~~i~h~di~p~nil~~~~~---~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~ 153 (228)
+. +++|+||+|+||+++.++ .++|+|||++......... ......+..|+|||++.+..++.++|||||||+
T Consensus 134 ~~---~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~i 210 (277)
T cd05036 134 EN---HFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVL 210 (277)
T ss_pred HC---CEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHH
Confidence 99 999999999999998754 5899999998765322111 112233567999999988889999999999999
Q ss_pred HHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 154 ALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 154 l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
+|+|++ |..||...... .....+........ ....+..+.+++.+||+.+|.+|||+.++++.|++
T Consensus 211 l~el~~~g~~pf~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 211 LWEIFSLGYMPYPGRTNQ------EVMEFVTGGGRLDP---PKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HHHHHcCCCCCCCCCCHH------HHHHHHHcCCcCCC---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 999996 99998643211 11111111111111 12445678999999999999999999999999874
No 147
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.1e-39 Score=244.02 Aligned_cols=210 Identities=27% Similarity=0.445 Sum_probs=172.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++++......|+++|++.+++|.+++.... ..+++..+..++.|++.|+.+||+.
T Consensus 43 ~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~-- 118 (256)
T cd06612 43 QEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSN-- 118 (256)
T ss_pred HHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 578899999999999999999999999999999999999999999986543 2388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
+++|+||+|+||+++.++.++|+|||.+..............++..|+|||++.+..++.++|+||+|+++|+|++|..
T Consensus 119 -~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~ 197 (256)
T cd06612 119 -KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKP 197 (256)
T ss_pred -CcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999998876544333344557889999999988889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||....... ......... .........++..+.+++.+||+.||.+|||+.++++
T Consensus 198 p~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 198 PYSDIHPMR------AIFMIPNKP-PPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CCCCcchhh------hhhhhccCC-CCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 986432211 111111111 1111112245567899999999999999999999985
No 148
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.5e-39 Score=247.73 Aligned_cols=214 Identities=24% Similarity=0.465 Sum_probs=171.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCC-------------------CCCCCCHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT-------------------SAEELGWSRR 63 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-------------------~~~~~~~~~~ 63 (228)
+.+.+|+.+++++.|+||+++++++......++++|++++++|.+++.... ....++...+
T Consensus 53 ~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 132 (288)
T cd05050 53 ADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQ 132 (288)
T ss_pred HHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHH
Confidence 468889999999999999999999999899999999999999999986421 1123678889
Q ss_pred HHHHHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCc
Q 040501 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKV 141 (228)
Q Consensus 64 ~~~~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~ 141 (228)
+.++.|++.||.+||+. |++|+||+|+||+++.++.++++|||.+......... ......+..|+|||.+.+..+
T Consensus 133 ~~~~~~i~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~ 209 (288)
T cd05050 133 LCIAKQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRY 209 (288)
T ss_pred HHHHHHHHHHHHHHHhC---CeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCC
Confidence 99999999999999999 9999999999999999999999999988754332211 112234567999999988889
Q ss_pred ccchhhhhHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHH
Q 040501 142 TAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQ 220 (228)
Q Consensus 142 ~~~~DiwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 220 (228)
+.++|+||||+++|+|++ |..||.... .......+......... ...+.++.+++.+||+.+|.+|||+.
T Consensus 210 ~~~~Dv~slG~il~el~~~~~~p~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~ 280 (288)
T cd05050 210 TTESDVWAYGVVLWEIFSYGMQPYYGMA------HEEVIYYVRDGNVLSCP---DNCPLELYNLMRLCWSKLPSDRPSFA 280 (288)
T ss_pred CchhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHhcCCCCCCC---CCCCHHHHHHHHHHcccCcccCCCHH
Confidence 999999999999999997 878874322 12222333223222111 23456799999999999999999999
Q ss_pred HHHHHhhC
Q 040501 221 TICQLLCK 228 (228)
Q Consensus 221 ~il~~l~~ 228 (228)
++++.|++
T Consensus 281 el~~~l~~ 288 (288)
T cd05050 281 SINRILQR 288 (288)
T ss_pred HHHHHhhC
Confidence 99999986
No 149
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.9e-40 Score=260.05 Aligned_cols=208 Identities=23% Similarity=0.413 Sum_probs=176.9
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecC--eEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHAR--HSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH 79 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 79 (228)
.++|..|+.+|+.|+|+||+++++++.+.. .+.+|+|.+..|+|..|+.+... ++...+..|++||+.||.|||+
T Consensus 85 leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~---vn~kaik~W~RQILkGL~yLHs 161 (632)
T KOG0584|consen 85 LERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRR---VNIKAIKSWCRQILKGLVYLHS 161 (632)
T ss_pred HHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhcc---CCHHHHHHHHHHHHHHhhhhhc
Confidence 478999999999999999999999997654 58899999999999999987654 7889999999999999999999
Q ss_pred CCCCCeeecCCCCCceEEcCC-CceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHH
Q 040501 80 DCIPPIVHRDISSKNVLLDLE-YEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158 (228)
Q Consensus 80 ~~~~~i~h~di~p~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~ 158 (228)
+. +.|+|||||.+|||++.+ |.|||+|+|+++...... .....|||.|||||+.. ..|....||||||+.+.||+
T Consensus 162 ~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~--aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMv 237 (632)
T KOG0584|consen 162 QD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH--AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMV 237 (632)
T ss_pred CC-CCccccccccceEEEcCCcCceeecchhHHHHhhccc--cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHH
Confidence 85 489999999999999876 999999999999865433 33478999999999876 77999999999999999999
Q ss_pred hCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 159 KGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 159 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|+..||. ...++.....++..+..|...... -.+++.++|.+||.. ..+|||+.|+|+
T Consensus 238 T~eYPYs-----EC~n~AQIYKKV~SGiKP~sl~kV--~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 238 TSEYPYS-----ECTNPAQIYKKVTSGIKPAALSKV--KDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred hccCChh-----hhCCHHHHHHHHHcCCCHHHhhcc--CCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 9999973 455666666666666655432221 134789999999999 999999999986
No 150
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=8.6e-40 Score=257.93 Aligned_cols=209 Identities=20% Similarity=0.262 Sum_probs=165.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++||||+++++.+..+...|+||||+.+++|.+++... .++...+..++.|++.||+|||+.
T Consensus 88 ~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~-- 161 (370)
T cd05621 88 AFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSM-- 161 (370)
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 34678999999999999999999999999999999999999999998653 278889999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCC-CceecccccceeCCcccccCC----cccchhhhhHHHHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS-NWTEFAGTYGYVAPELAYTMK----VTAKCDVYSFGVLALEV 157 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~----~~~~~DiwslG~~l~~~ 157 (228)
||+||||||+||+++.++.+||+|||++........ ......|++.|+|||++.+.. ++.++|+||+||++|+|
T Consensus 162 -~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyel 240 (370)
T cd05621 162 -GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM 240 (370)
T ss_pred -CeEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHH
Confidence 999999999999999999999999999986543222 123456899999999987543 67899999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCC--CCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPES--RPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rpt~~~il~ 224 (228)
++|..||.... .......+...............+..+.+++.+||..++.+ |+|+.++++
T Consensus 241 l~G~~Pf~~~~------~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~ 303 (370)
T cd05621 241 LVGDTPFYADS------LVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ 303 (370)
T ss_pred HhCCCCCCCCC------HHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence 99999986432 12223333322211111111245667889999999855543 889999876
No 151
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.9e-39 Score=242.70 Aligned_cols=211 Identities=27% Similarity=0.428 Sum_probs=172.1
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+++.+|+.+++.++|+||+++++++......++|||++++++|.+++..... ..+++..+..++.|++.|+.|||+.
T Consensus 44 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~- 121 (256)
T cd05039 44 AQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEK- 121 (256)
T ss_pred HHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 45788999999999999999999999988999999999999999999875442 2489999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-C
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-G 160 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g 160 (228)
|++|+||+|+||+++.++.++|+|||.+........ ....+..|+|||.+.+..++.++|+||||+++|++++ |
T Consensus 122 --~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g 196 (256)
T cd05039 122 --NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 196 (256)
T ss_pred --CccchhcccceEEEeCCCCEEEcccccccccccccc---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999876532221 2234567999999988888999999999999999997 9
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
..||.... ................ ....+..+.+++.+||..+|.+|||+.++++.|++
T Consensus 197 ~~p~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 197 RVPYPRIP------LKDVVPHVEKGYRMEA---PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CCCCCCCC------HHHHHHHHhcCCCCCC---ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 99975332 1122222211111111 12456678999999999999999999999999874
No 152
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.3e-39 Score=258.26 Aligned_cols=210 Identities=20% Similarity=0.238 Sum_probs=163.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+||+++++++.+....|+||||+.+++|.+++.... .+++..+..++.|++.||.|||+.
T Consensus 46 ~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~-- 120 (381)
T cd05626 46 AHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKM-- 120 (381)
T ss_pred HHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 357889999999999999999999999999999999999999999987543 378888999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCC-------------------------------------------
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS------------------------------------------- 119 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~------------------------------------------- 119 (228)
||+||||||+||+++.++.++|+|||++........
T Consensus 121 -givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (381)
T cd05626 121 -GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQ 199 (381)
T ss_pred -CeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccc
Confidence 999999999999999999999999998753210000
Q ss_pred ----CceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhh
Q 040501 120 ----NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIR 195 (228)
Q Consensus 120 ----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (228)
......|++.|+|||.+.+..++.++|||||||++|+|++|..||..... ......+.............
T Consensus 200 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~------~~~~~~i~~~~~~~~~~~~~ 273 (381)
T cd05626 200 HQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTP------TETQLKVINWENTLHIPPQV 273 (381)
T ss_pred ccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCH------HHHHHHHHccccccCCCCCC
Confidence 01124688999999999888899999999999999999999999864321 11112222111100001112
Q ss_pred hhHHHHHHHHHHh--hccCCCCCCCHHHHHH
Q 040501 196 GKVISIMEVAFLC--LDNNPESRPNMQTICQ 224 (228)
Q Consensus 196 ~~~~~~~~li~~~--l~~~p~~Rpt~~~il~ 224 (228)
..+.++.++|.+| +..+|..|++++++++
T Consensus 274 ~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 274 KLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred CCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 3456788999984 4566667999999975
No 153
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.3e-39 Score=251.64 Aligned_cols=216 Identities=19% Similarity=0.287 Sum_probs=164.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.+|++++++++|+||+++++++..+...++||||+.+ +|.+++..... .++...+..++.|++.||+|||+.
T Consensus 49 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~lH~~-- 123 (309)
T cd07872 49 CTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGN--IMSMHNVKIFLYQILRGLAYCHRR-- 123 (309)
T ss_pred hhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 3567899999999999999999999999999999999975 77777654432 378889999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++||||||+||+++.++.++|+|||.+..............+++.|+|||.+.+ ..++.++||||||+++|+|++|.
T Consensus 124 -~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~ 202 (309)
T cd07872 124 -KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGR 202 (309)
T ss_pred -CeecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999998765433333334467889999998765 45788999999999999999999
Q ss_pred CCccccccccCCCc---------hhhh---------hhhcCCCCC--CCchhhhhhHHHHHHHHHHhhccCCCCCCCHHH
Q 040501 162 HPRDFLSNVSSSNP---------NILV---------NEMLDPRLP--PLSVDIRGKVISIMEVAFLCLDNNPESRPNMQT 221 (228)
Q Consensus 162 ~p~~~~~~~~~~~~---------~~~~---------~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 221 (228)
.||........... .... .....+... .........+.++.++|.+||+.||.+|||+.+
T Consensus 203 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e 282 (309)
T cd07872 203 PLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEE 282 (309)
T ss_pred CCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHH
Confidence 99864322110000 0000 000000000 000111234567889999999999999999999
Q ss_pred HHH
Q 040501 222 ICQ 224 (228)
Q Consensus 222 il~ 224 (228)
+++
T Consensus 283 ~l~ 285 (309)
T cd07872 283 AMK 285 (309)
T ss_pred Hhc
Confidence 876
No 154
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.9e-39 Score=242.19 Aligned_cols=210 Identities=27% Similarity=0.410 Sum_probs=168.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeee-ecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCT-HARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+.+|+.++++++|+|++++++++. .+...++++||+++++|.+++..... ..+++..++.++.|++.||++||+.
T Consensus 44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~- 121 (256)
T cd05082 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEAN- 121 (256)
T ss_pred HHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 56889999999999999999999764 45678999999999999999875432 3378899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-C
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-G 160 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g 160 (228)
|++|+||+|+||+++.++.++++|||++....... .....+..|+|||++.+..++.++|+||||+++|+|++ |
T Consensus 122 --~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g 196 (256)
T cd05082 122 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 196 (256)
T ss_pred --CEeccccchheEEEcCCCcEEecCCccceeccccC---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCC
Confidence 99999999999999999999999999887544322 12234567999999988889999999999999999997 9
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
..||.... .......+....... .....+..+.+++.+||+.+|.+|||+.++++.|++
T Consensus 197 ~~p~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 197 RVPYPRIP------LKDVVPRVEKGYKMD---APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCCCCC------HHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 99975321 111222221111111 112456678999999999999999999999999864
No 155
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=5.6e-39 Score=241.00 Aligned_cols=211 Identities=24% Similarity=0.365 Sum_probs=169.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.+|++++++++|+||+++++++......++||||+.+++|.+++..... .+++.+++.++.+++.+|.++|+.
T Consensus 37 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~-- 112 (250)
T cd05085 37 IKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKD--ELKTKQLVKFALDAAAGMAYLESK-- 112 (250)
T ss_pred HHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 4578999999999999999999999999999999999999999998865432 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc-eecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-C
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW-TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-G 160 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g 160 (228)
|++|+||+|+||+++.++.++++|||.+.......... ....++..|+|||++.+..++.++|+||||+++|++++ |
T Consensus 113 -~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g 191 (250)
T cd05085 113 -NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLG 191 (250)
T ss_pred -CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999887543222111 11233567999999988888999999999999999998 9
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
..||...... .............. ....+..+.+++.+||+.+|++|||+.++++.|.
T Consensus 192 ~~p~~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 192 VCPYPGMTNQ------QAREQVEKGYRMSC---PQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCCCCHH------HHHHHHHcCCCCCC---CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 9998643221 11122211111111 1234567899999999999999999999999885
No 156
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.5e-39 Score=246.78 Aligned_cols=210 Identities=25% Similarity=0.428 Sum_probs=170.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++.+..+...|+||||+++++|.+++..... .+++..+..++.|++.++.|||+.
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~-- 122 (280)
T cd06611 47 EDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLHSH-- 122 (280)
T ss_pred HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 4678899999999999999999999999999999999999999999875432 389999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccc-----cCCcccchhhhhHHHHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAY-----TMKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DiwslG~~l~~~ 157 (228)
|++|+||+|+||+++.++.++|+|||.+..............+++.|+|||.+. ...++.++|+||||+++|+|
T Consensus 123 -~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l 201 (280)
T cd06611 123 -KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIEL 201 (280)
T ss_pred -CcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHH
Confidence 999999999999999999999999998876544433344456788999999875 33467799999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++|..||..... ............+... .....+.++.+++.+||..+|.+|||+.++++
T Consensus 202 ~~g~~p~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 202 AQMEPPHHELNP------MRVLLKILKSEPPTLD-QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred HhCCCCcccCCH------HHHHHHHhcCCCCCcC-CcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 999999864321 1222222222221111 11245567899999999999999999999875
No 157
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.2e-39 Score=258.66 Aligned_cols=209 Identities=20% Similarity=0.250 Sum_probs=162.9
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+||+++++.|.+....|+||||+.+++|.+++.+.. .+++..+..++.|++.||.|||+.
T Consensus 46 ~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~-- 120 (382)
T cd05625 46 AHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKM-- 120 (382)
T ss_pred HHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 457789999999999999999999999999999999999999999987543 378889999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCC--------------------------------------------
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS-------------------------------------------- 118 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~-------------------------------------------- 118 (228)
||+||||||+||+++.+|.++|+|||++.......
T Consensus 121 -~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (382)
T cd05625 121 -GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQ 199 (382)
T ss_pred -CeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccc
Confidence 99999999999999999999999999875321000
Q ss_pred ---CCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhh
Q 040501 119 ---SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIR 195 (228)
Q Consensus 119 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (228)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||..... ......+.............
T Consensus 200 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~~~~~~p~~~ 273 (382)
T cd05625 200 HQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTP------LETQMKVINWQTSLHIPPQA 273 (382)
T ss_pred cccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCH------HHHHHHHHccCCCcCCCCcc
Confidence 001123588999999999988999999999999999999999999864321 12222222111110011112
Q ss_pred hhHHHHHHHHHHhhccCCCCCCC---HHHHHH
Q 040501 196 GKVISIMEVAFLCLDNNPESRPN---MQTICQ 224 (228)
Q Consensus 196 ~~~~~~~~li~~~l~~~p~~Rpt---~~~il~ 224 (228)
..+.+..++|.+|+ .+|.+|++ +.++++
T Consensus 274 ~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 274 KLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred cCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 34567788888876 59999987 777653
No 158
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3.2e-39 Score=243.91 Aligned_cols=212 Identities=25% Similarity=0.401 Sum_probs=165.9
Q ss_pred HHHHHHHHHHhccCCCccceeeeeee-ecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCT-HARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+.+|+.+++.++||||+++++++. .+...++++||+.+++|.+++..... ..+...+..++.|++.||.|||+.
T Consensus 41 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~- 117 (262)
T cd05058 41 EQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETH--NPTVKDLIGFGLQVAKGMEYLASK- 117 (262)
T ss_pred HHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 46788999999999999999999775 45568899999999999999875432 256777888999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC----ceecccccceeCCcccccCCcccchhhhhHHHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN----WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~ 157 (228)
+++|+||+|+||+++.++.++|+|||++......... .....++..|+|||.+.+..++.++||||||+++|+|
T Consensus 118 --~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 195 (262)
T cd05058 118 --KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 195 (262)
T ss_pred --CccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998754322111 1123446689999999888899999999999999999
Q ss_pred HhC-CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 158 IKG-KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 158 ~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
++| .+||.... .............+... ...+..+.+++.+||..+|++||++.++++.|++
T Consensus 196 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~ 258 (262)
T cd05058 196 MTRGAPPYPDVD------SFDITVYLLQGRRLLQP---EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQ 258 (262)
T ss_pred HcCCCCCCCCCC------HHHHHHHHhcCCCCCCC---CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 994 56654321 22222222222222111 1345578999999999999999999999999863
No 159
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=6e-39 Score=246.13 Aligned_cols=210 Identities=24% Similarity=0.396 Sum_probs=167.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+||+++++.+..+...|+||||+.+++|..++..... .++...+..++.|++.++.+||+.
T Consensus 54 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~~-- 129 (292)
T cd06644 54 EDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDR--GLTEPQIQVICRQMLEALQYLHSM-- 129 (292)
T ss_pred HHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhcC--
Confidence 4678899999999999999999999999999999999999999888754332 388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-----CCcccchhhhhHHHHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-----MKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~DiwslG~~l~~~ 157 (228)
|++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+.+ ..++.++|+||||+++|+|
T Consensus 130 -~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el 208 (292)
T cd06644 130 -KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 208 (292)
T ss_pred -CeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHH
Confidence 9999999999999999999999999988764433333344567889999998753 3467789999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++|..||..... ............+... .....+.++.+++.+||..+|.+||++.++++
T Consensus 209 ~~g~~p~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 209 AQIEPPHHELNP------MRVLLKIAKSEPPTLS-QPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred hcCCCCCccccH------HHHHHHHhcCCCccCC-CCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 999999753221 1222222222211111 11244557889999999999999999999975
No 160
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8.6e-40 Score=259.10 Aligned_cols=209 Identities=22% Similarity=0.267 Sum_probs=163.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++||||++++++|.+....|+||||+.+++|.+++.... .++...+..++.|++.||+|||+.
T Consensus 46 ~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~-- 120 (377)
T cd05629 46 AHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVHKL-- 120 (377)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 457789999999999999999999999999999999999999999987543 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCC------------C------------------------------
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS------------N------------------------------ 120 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~------------~------------------------------ 120 (228)
|++||||||+||+++.++.++|+|||+++....... .
T Consensus 121 -givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (377)
T cd05629 121 -GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKK 199 (377)
T ss_pred -CeeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhh
Confidence 999999999999999999999999998863211000 0
Q ss_pred -----ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhh
Q 040501 121 -----WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIR 195 (228)
Q Consensus 121 -----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (228)
.....|++.|+|||++.+..++.++|||||||++|+|++|..||..... ......+.............
T Consensus 200 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~~~~~~p~~~ 273 (377)
T cd05629 200 NRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENS------HETYRKIINWRETLYFPDDI 273 (377)
T ss_pred cccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCH------HHHHHHHHccCCccCCCCCC
Confidence 0023588999999999988899999999999999999999999853322 12222222111000000112
Q ss_pred hhHHHHHHHHHHhhccCCCCC---CCHHHHHH
Q 040501 196 GKVISIMEVAFLCLDNNPESR---PNMQTICQ 224 (228)
Q Consensus 196 ~~~~~~~~li~~~l~~~p~~R---pt~~~il~ 224 (228)
..+.++.++|.+||. +|.+| +|+.++++
T Consensus 274 ~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~ 304 (377)
T cd05629 274 HLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS 304 (377)
T ss_pred CCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence 345678899999997 77765 58888775
No 161
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.4e-39 Score=247.87 Aligned_cols=209 Identities=27% Similarity=0.431 Sum_probs=169.9
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+.+|+.+++.++|+||+++++++......|+|+||+.+++|..++... .+++.++..++.+++.++.+||+.
T Consensus 60 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~- 134 (296)
T cd06655 60 KELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHAN- 134 (296)
T ss_pred HHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 356788999999999999999999999999999999999999999988643 278899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+.+..++.++|+||||+++|++++|.
T Consensus 135 --~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~ 212 (296)
T cd06655 135 --QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212 (296)
T ss_pred --CcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999999999999999999998876544333333346778999999998888899999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.||...... ...........+. ......++..+.++|.+||..+|.+|||+.++++
T Consensus 213 ~pf~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 213 PPYLNENPL------RALYLIATNGTPE-LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred CCCCCCCHH------HHHHHHHhcCCcc-cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 998543221 1111111111111 1112345567889999999999999999999875
No 162
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.8e-39 Score=244.79 Aligned_cols=214 Identities=23% Similarity=0.362 Sum_probs=168.0
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec------CeEEEEEEeecCCChhhhhhcC---CCCCCCCHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA------RHSFLVYEYLENGSLSVILNND---TSAEELGWSRRINVIKGIAHA 73 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~~l~~~ 73 (228)
+.+.+|+++++.++|+||+++++++... ...++++||+.+++|.+++... .....+++..+..++.|++.|
T Consensus 45 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 124 (272)
T cd05075 45 EDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG 124 (272)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHH
Confidence 4678899999999999999999987432 2568999999999998887421 123347899999999999999
Q ss_pred HHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHH
Q 040501 74 LSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFG 151 (228)
Q Consensus 74 l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG 151 (228)
|+|||+. |++|+||||+||+++.++.++|+|||++......... .....+++.|++||.+.+..++.++|+||||
T Consensus 125 l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG 201 (272)
T cd05075 125 MEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFG 201 (272)
T ss_pred HHHHHHC---CeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHH
Confidence 9999999 9999999999999999999999999998865433221 1223456789999999888899999999999
Q ss_pred HHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 152 VLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 152 ~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
+++|++++ |..||..... ......+........ ....+..+.+++.+||+.||.+|||+.++++.|++
T Consensus 202 ~il~el~~~g~~p~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 202 VTMWEIATRGQTPYPGVEN------SEIYDYLRQGNRLKQ---PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred HHHHHHHcCCCCCCCCCCH------HHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 99999998 8889864221 122222222221111 12455678999999999999999999999999864
No 163
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.8e-39 Score=248.82 Aligned_cols=209 Identities=23% Similarity=0.374 Sum_probs=161.4
Q ss_pred HHHHHHHHHhcc---CCCccceeeeeee-----ecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 040501 4 EFLREITVLTEI---RHRNIVKFYGFCT-----HARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 4 ~~~~E~~~l~~l---~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 75 (228)
.+.+|+.+++.+ +||||+++++++. .....++++|++. ++|.+++..... ..+++..+..++.|++.||.
T Consensus 47 ~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~ 124 (290)
T cd07862 47 STIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLD 124 (290)
T ss_pred HHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHH
Confidence 466788877766 6999999999885 2456899999996 588888765432 33789999999999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHH
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLAL 155 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~ 155 (228)
|||+. |++|+||||+||+++.++.++|+|||++...... .......+++.|+|||.+.+..++.++||||||+++|
T Consensus 125 ~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~ 200 (290)
T cd07862 125 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFA 200 (290)
T ss_pred HHHHC---CeeeCCCCHHHEEEcCCCCEEEccccceEeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHH
Confidence 99999 9999999999999999999999999998765433 2233456789999999998888999999999999999
Q ss_pred HHHhCCCCccccccccCCCchhhhhhhcC----------------------CCCC-CCchhhhhhHHHHHHHHHHhhccC
Q 040501 156 EVIKGKHPRDFLSNVSSSNPNILVNEMLD----------------------PRLP-PLSVDIRGKVISIMEVAFLCLDNN 212 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------~~~~-~~~~~~~~~~~~~~~li~~~l~~~ 212 (228)
+|++|.+||....... ....+.+ .... .........+..+.+++.+||+.|
T Consensus 201 el~~g~~~f~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 274 (290)
T cd07862 201 EMFRRKPLFRGSSDVD------QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN 274 (290)
T ss_pred HHHcCCCCcCCCCHHH------HHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccC
Confidence 9999999986432211 1111100 0000 000011234566789999999999
Q ss_pred CCCCCCHHHHHH
Q 040501 213 PESRPNMQTICQ 224 (228)
Q Consensus 213 p~~Rpt~~~il~ 224 (228)
|++|||+.++++
T Consensus 275 P~~R~s~~~~l~ 286 (290)
T cd07862 275 PAKRISAYSALS 286 (290)
T ss_pred chhcCCHHHHhc
Confidence 999999999985
No 164
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.9e-39 Score=249.57 Aligned_cols=214 Identities=23% Similarity=0.399 Sum_probs=170.0
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC-------------CCCCCHHHHHHHHH
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-------------AEELGWSRRINVIK 68 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-------------~~~~~~~~~~~~~~ 68 (228)
+.+.+|+++++.+ +|+||+++++++..+...|++|||+.+++|.+++..... ...+++.+++.++.
T Consensus 68 ~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 147 (307)
T cd05098 68 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAY 147 (307)
T ss_pred HHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHH
Confidence 4577899999999 799999999999999999999999999999999975421 12478899999999
Q ss_pred HHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc--eecccccceeCCcccccCCcccchh
Q 040501 69 GIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW--TEFAGTYGYVAPELAYTMKVTAKCD 146 (228)
Q Consensus 69 ~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D 146 (228)
|++.||+|||+. |++|+||||+||+++.++.++|+|||.+.......... ....++..|+|||.+.+..++.++|
T Consensus 148 qi~~aL~~lH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 224 (307)
T cd05098 148 QVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 224 (307)
T ss_pred HHHHHHHHHHHC---CcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHH
Confidence 999999999999 99999999999999999999999999987654222111 1122346799999998888899999
Q ss_pred hhhHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 147 VYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 147 iwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
+||||+++|+|++ |..||.... .......+........ ....+.++.+++.+||..+|.+|||+.++++.
T Consensus 225 vwslG~~l~el~~~g~~p~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 225 VWSFGVLLWEIFTLGGSPYPGVP------VEELFKLLKEGHRMDK---PSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHHHHHHHHHHHcCCCCCCCcCC------HHHHHHHHHcCCCCCC---CCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 9999999999998 888875321 1122222212211111 12345678899999999999999999999998
Q ss_pred hhC
Q 040501 226 LCK 228 (228)
Q Consensus 226 l~~ 228 (228)
|++
T Consensus 296 l~~ 298 (307)
T cd05098 296 LDR 298 (307)
T ss_pred HHH
Confidence 863
No 165
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=6e-40 Score=259.93 Aligned_cols=209 Identities=20% Similarity=0.238 Sum_probs=164.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++.+.++..+|+||||+.+++|.+++.... .++...+..++.|++.||+|||+.
T Consensus 46 ~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~-- 120 (376)
T cd05598 46 AHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKM-- 120 (376)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 457789999999999999999999999999999999999999999987543 378888999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCC-------------------------------------------C
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS-------------------------------------------S 119 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~-------------------------------------------~ 119 (228)
||+||||||+||+++.++.++|+|||++....... .
T Consensus 121 -~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (376)
T cd05598 121 -GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRC 199 (376)
T ss_pred -CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccc
Confidence 99999999999999999999999999874221000 0
Q ss_pred CceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHH
Q 040501 120 NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVI 199 (228)
Q Consensus 120 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (228)
......|++.|+|||++.+..++.++|||||||++|+|++|..||..... ......+...............+.
T Consensus 200 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~~~~~~~~~~~~s~ 273 (376)
T cd05598 200 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTP------AETQLKVINWETTLHIPSQAKLSR 273 (376)
T ss_pred cccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCH------HHHHHHHhccCccccCCCCCCCCH
Confidence 01124688999999999998899999999999999999999999864322 111112211111100111123556
Q ss_pred HHHHHHHHhhccCCCCCC---CHHHHHH
Q 040501 200 SIMEVAFLCLDNNPESRP---NMQTICQ 224 (228)
Q Consensus 200 ~~~~li~~~l~~~p~~Rp---t~~~il~ 224 (228)
++.++|.+|+ .+|.+|+ |+.++++
T Consensus 274 ~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 274 EASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred HHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 7788999876 5999999 8888874
No 166
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.1e-39 Score=255.59 Aligned_cols=210 Identities=20% Similarity=0.259 Sum_probs=163.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.+|+.++..++|++|+++++.+.+....|+||||+++++|.+++.... .++...+..++.|++.||.|||+.
T Consensus 46 ~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~-- 120 (363)
T cd05628 46 GHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQL-- 120 (363)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 456789999999999999999999999999999999999999999987543 388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCC-----------------------------------Cceecccc
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS-----------------------------------NWTEFAGT 127 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~-----------------------------------~~~~~~~~ 127 (228)
||+||||||+||+++.++.++|+|||++........ ......|+
T Consensus 121 -givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt 199 (363)
T cd05628 121 -GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGT 199 (363)
T ss_pred -CeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCC
Confidence 999999999999999999999999999875432110 01234689
Q ss_pred cceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHH
Q 040501 128 YGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFL 207 (228)
Q Consensus 128 ~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 207 (228)
+.|+|||++.+..++.++|+|||||++|+|++|..||.... .......+...............+.+..++|.+
T Consensus 200 ~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~------~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~ 273 (363)
T cd05628 200 PDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET------PQETYKKVMNWKETLIFPPEVPISEKAKDLILR 273 (363)
T ss_pred ccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHH
Confidence 99999999998889999999999999999999999986432 222223332211100000112344567788888
Q ss_pred hhc--cCCCCCCCHHHHHH
Q 040501 208 CLD--NNPESRPNMQTICQ 224 (228)
Q Consensus 208 ~l~--~~p~~Rpt~~~il~ 224 (228)
|+. .++..||++.++++
T Consensus 274 l~~~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 274 FCCEWEHRIGAPGVEEIKT 292 (363)
T ss_pred HcCChhhcCCCCCHHHHhC
Confidence 664 23345689999875
No 167
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3e-39 Score=245.03 Aligned_cols=215 Identities=24% Similarity=0.355 Sum_probs=163.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS--AEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
..+.+|+++++.++|+||+++++.+......|+||||+.+++|.+++..... ....+...+..++.|++.||+|||+.
T Consensus 40 ~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 119 (269)
T cd05042 40 LLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA 119 (269)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc
Confidence 4578899999999999999999999999999999999999999999876432 22346778889999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCccccc-------CCcccchhhhhHH
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYT-------MKVTAKCDVYSFG 151 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-------~~~~~~~DiwslG 151 (228)
|++|+||||+||+++.++.++|+|||.+......... .....++..|+|||++.. ..++.++||||||
T Consensus 120 ---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG 196 (269)
T cd05042 120 ---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLG 196 (269)
T ss_pred ---CEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHH
Confidence 9999999999999999999999999988653322111 122334567999998643 3467899999999
Q ss_pred HHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCC--CCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 152 VLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLP--PLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 152 ~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
+++|+|++ |..||..... ............. +........+..+.+++..|| .||.+|||++++++.|.
T Consensus 197 ~~l~el~~~~~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 197 VTMWELFTAADQPYPDLSD------EQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred HHHHHHHhCCCCCCCcCCH------HHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 99999998 7888754321 1111111111110 011112345567788999998 59999999999999874
No 168
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=4.7e-39 Score=244.30 Aligned_cols=214 Identities=22% Similarity=0.400 Sum_probs=170.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCe------EEEEEEeecCCChhhhhhcCC---CCCCCCHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARH------SFLVYEYLENGSLSVILNNDT---SAEELGWSRRINVIKGIAHA 73 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~------~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~~l~~~ 73 (228)
+.+.+|++.++.++|+||+++++++..... .++++||+.+++|..++.... ....+++..+..++.|++.|
T Consensus 46 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~a 125 (273)
T cd05035 46 EEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALG 125 (273)
T ss_pred HHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHH
Confidence 467899999999999999999998865443 799999999999998885421 22358899999999999999
Q ss_pred HHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc--eecccccceeCCcccccCCcccchhhhhHH
Q 040501 74 LSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW--TEFAGTYGYVAPELAYTMKVTAKCDVYSFG 151 (228)
Q Consensus 74 l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DiwslG 151 (228)
|.|||+. |++|+||||+||++++++.++|+|||.+.......... .....+..|+|||.+.+..++.++||||||
T Consensus 126 L~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG 202 (273)
T cd05035 126 MEYLSNR---NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFG 202 (273)
T ss_pred HHHHHhC---CeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHH
Confidence 9999999 99999999999999999999999999988654332221 112345679999999888899999999999
Q ss_pred HHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 152 VLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 152 ~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
+++|+|++ |..||.... ................. ..++..+.+++.+||+.||.+|||+.++++.|++
T Consensus 203 ~il~el~~~g~~p~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 203 VTMWEIATRGQTPYPGVE------NHEIYDYLRHGNRLKQP---EDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred HHHHHHHhCCCCCCCCCC------HHHHHHHHHcCCCCCCC---cCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 99999998 889975432 12222333222222211 2456679999999999999999999999999864
No 169
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=4.4e-39 Score=243.01 Aligned_cols=214 Identities=25% Similarity=0.502 Sum_probs=172.9
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+++.+|+.++++++|+||+++++++......++++|++++++|.+++..... ..++..++..++.+++.|+.+||+.
T Consensus 45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~i~~al~~lh~~- 122 (261)
T cd05034 45 PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEG-KKLRLPQLVDMAAQIAEGMAYLESR- 122 (261)
T ss_pred HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhcccc-CCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 46788999999999999999999999988899999999999999999876432 3488999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
|++|+||+|+||+++.++.++++|||.+......... ......+..|+|||.+.+..++.++|+||+|+++|++++
T Consensus 123 --~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~ 200 (261)
T cd05034 123 --NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTY 200 (261)
T ss_pred --CcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999998765432111 112234567999999988888999999999999999998
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|+.||.... .......+......... ...+.++.+++.+||..+|.+|||++++++.|+.
T Consensus 201 g~~p~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 201 GRVPYPGMT------NREVLEQVERGYRMPRP---PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCCC------HHHHHHHHHcCCCCCCC---CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 999975322 22222333222111111 1235678999999999999999999999999874
No 170
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=4.1e-39 Score=244.92 Aligned_cols=207 Identities=27% Similarity=0.459 Sum_probs=172.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+||+++++++..+...|+++|++.+++|.+++... .++...++.++.|++.++.+||+.
T Consensus 44 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~-- 117 (274)
T cd06609 44 EDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE-- 117 (274)
T ss_pred HHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 45788999999999999999999999999999999999999999998754 488999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
+++|+||+|+||+++.++.++++|||++..............+++.|+|||.+.+..++.++|+||||+++|+|++|..
T Consensus 118 -~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~ 196 (274)
T cd06609 118 -GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEP 196 (274)
T ss_pred -CcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999877644333344567788999999988889999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||.... .......+.....+.... ..++.++.+++.+||..+|.+|||++++++
T Consensus 197 p~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 197 PLSDLH------PMRVLFLIPKNNPPSLEG--NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred CcccCc------hHHHHHHhhhcCCCCCcc--cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 985332 112222222222221111 125667899999999999999999999975
No 171
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=5.1e-39 Score=242.12 Aligned_cols=209 Identities=28% Similarity=0.421 Sum_probs=170.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeee-cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTH-ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+.+|++++++++|+|++++++.+.. +...|+++|++++++|.+++.... ...+++.++..++.+++.++.+||+.
T Consensus 44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~- 121 (257)
T cd08223 44 KAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEK- 121 (257)
T ss_pred HHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 467889999999999999999998764 446899999999999999987532 23488999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++|+|||++..............+++.|+|||.+.+..++.++|+||+|++++++++|.
T Consensus 122 --~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~ 199 (257)
T cd08223 122 --HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLK 199 (257)
T ss_pred --CeeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCC
Confidence 999999999999999999999999999886654333344456788999999998888899999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.||.... .............+... ...+..+.+++.+||+.||.+|||+.++++
T Consensus 200 ~~~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 200 HAFNAKD------MNSLVYRIIEGKLPPMP---KDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred CCCCCCC------HHHHHHHHHhcCCCCCc---cccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 9975321 22222233333332221 245567899999999999999999999985
No 172
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-40 Score=260.57 Aligned_cols=210 Identities=25% Similarity=0.397 Sum_probs=179.0
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
++|+-||++|..+.||+|+++++.|+..+.+||+.|||+||..+..+-.-+. .+.+.++..+++|++.||.|||++
T Consensus 74 EDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r--~LtE~QIqvvc~q~ldALn~LHs~-- 149 (1187)
T KOG0579|consen 74 EDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGR--VLTEDQIQVVCYQVLDALNWLHSQ-- 149 (1187)
T ss_pred hhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhcc--ccchHHHHHHHHHHHHHHHHHhhc--
Confidence 5678899999999999999999999999999999999999999888765443 389999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccc-----cCCcccchhhhhHHHHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAY-----TMKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DiwslG~~l~~~ 157 (228)
+|+|||||..||+++-+|.++|.|||.+............+.|||+|||||+.. ..+|+.++||||||+.+.+|
T Consensus 150 -~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEM 228 (1187)
T KOG0579|consen 150 -NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEM 228 (1187)
T ss_pred -chhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHH
Confidence 999999999999999999999999998876554445566789999999999765 44689999999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
..+.+|. ...++...+-.+....+|..... ..-+..+.+++++||.+||..||+++++++
T Consensus 229 AqiEPPH------helnpMRVllKiaKSePPTLlqP-S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 229 AQIEPPH------HELNPMRVLLKIAKSEPPTLLQP-SHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred hccCCCc------cccchHHHHHHHhhcCCCcccCc-chhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 9999994 44445555555555555443322 345567899999999999999999999986
No 173
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.2e-39 Score=242.57 Aligned_cols=213 Identities=24% Similarity=0.452 Sum_probs=169.9
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+++.+|+.++++++|+||+++++++. ....++++|++.+++|.+++..... ..++..++..++.|++.||+|||+.
T Consensus 45 ~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~- 121 (260)
T cd05067 45 PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIERK- 121 (260)
T ss_pred HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHhcC-
Confidence 357889999999999999999999874 4578999999999999998865432 3478899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
|++|+||+|+||+++.++.++++|||.+......... .....++..|+|||.+.+..++.++|+||||+++|++++
T Consensus 122 --~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~ 199 (260)
T cd05067 122 --NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTY 199 (260)
T ss_pred --CeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhC
Confidence 9999999999999999999999999998765422211 122345678999999988888999999999999999998
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|..||.... ..............+.. ...+.++.+++.+||+.+|++|||++++++.|+.
T Consensus 200 g~~p~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 200 GRIPYPGMT------NPEVIQNLERGYRMPRP---DNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCCCC------hHHHHHHHHcCCCCCCC---CCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 999985332 11222222222111111 2345679999999999999999999999999873
No 174
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.5e-39 Score=249.20 Aligned_cols=213 Identities=22% Similarity=0.407 Sum_probs=169.5
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCC-------------CCCCCCHHHHHHHHH
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT-------------SAEELGWSRRINVIK 68 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-------------~~~~~~~~~~~~~~~ 68 (228)
+.+.+|+++++++ +|+||+++++++......|+++||+.+++|.+++.... ....+++.++..++.
T Consensus 62 ~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 141 (314)
T cd05099 62 ADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAY 141 (314)
T ss_pred HHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHH
Confidence 3577899999999 69999999999998889999999999999999986532 123478899999999
Q ss_pred HHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchh
Q 040501 69 GIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCD 146 (228)
Q Consensus 69 ~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~D 146 (228)
|++.||.|||+. |++|+||||+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.++|
T Consensus 142 qi~~aL~~lH~~---gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 218 (314)
T cd05099 142 QVARGMEYLESR---RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSD 218 (314)
T ss_pred HHHHHHHHHHHC---CeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccch
Confidence 999999999999 9999999999999999999999999999765432211 11122345799999998888999999
Q ss_pred hhhHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 147 VYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 147 iwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
+||||+++|++++ |..||.... .......+........ ...++.++.+++.+||..+|.+|||+.++++.
T Consensus 219 iwslG~~l~el~~~g~~p~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 289 (314)
T cd05099 219 VWSFGILMWEIFTLGGSPYPGIP------VEELFKLLREGHRMDK---PSNCTHELYMLMRECWHAVPTQRPTFKQLVEA 289 (314)
T ss_pred hhHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 9999999999998 888875322 1222222222221111 12445578899999999999999999999998
Q ss_pred hh
Q 040501 226 LC 227 (228)
Q Consensus 226 l~ 227 (228)
|+
T Consensus 290 l~ 291 (314)
T cd05099 290 LD 291 (314)
T ss_pred HH
Confidence 86
No 175
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.9e-39 Score=252.14 Aligned_cols=200 Identities=22% Similarity=0.309 Sum_probs=164.3
Q ss_pred HHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 4 EFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 4 ~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
.+..|..++..+ +|++|+++++++...+..|+||||+.+++|.+.+.... .+++.++..++.|++.||.|||+.
T Consensus 46 ~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~-- 120 (323)
T cd05616 46 CTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSK-- 120 (323)
T ss_pred HHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 456788888877 58999999999999999999999999999998886543 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|+|||||++|+|++|..
T Consensus 121 -~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~ 199 (323)
T cd05616 121 -GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 199 (323)
T ss_pred -CEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCC
Confidence 9999999999999999999999999998754433333344578999999999999899999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM 219 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 219 (228)
||.... .......+....... + ...+.++.+++.+||+.+|.+|+++
T Consensus 200 Pf~~~~------~~~~~~~i~~~~~~~-p---~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 200 PFEGED------EDELFQSIMEHNVAY-P---KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCCCCC------HHHHHHHHHhCCCCC-C---CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 986432 223333333332211 1 2345678899999999999999985
No 176
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=7e-39 Score=243.71 Aligned_cols=215 Identities=26% Similarity=0.435 Sum_probs=172.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCC------CCCCHHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSA------EELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~ 76 (228)
+.+.+|++++++++|+||+++++++......|+||||+.+++|.+++...... ..+++..+..++.|++.+|+|
T Consensus 53 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~ 132 (275)
T cd05046 53 SEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDH 132 (275)
T ss_pred HHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence 56889999999999999999999999989999999999999999998764421 248899999999999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCC-CCceecccccceeCCcccccCCcccchhhhhHHHHHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS-SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLAL 155 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~ 155 (228)
||+. |++|+||||+||+++.++.++++|||.+....... .......++..|+|||.+.+..++.++||||||+++|
T Consensus 133 LH~~---~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~ 209 (275)
T cd05046 133 LSNA---RFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMW 209 (275)
T ss_pred hhhc---CcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHH
Confidence 9999 99999999999999999999999999876432221 1123334567799999988888889999999999999
Q ss_pred HHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 156 EVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 156 ~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
++++ |..||..... ............... .....+..+.+++.+||+.+|.+|||+.+++..|.+
T Consensus 210 ~l~~~~~~p~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 210 EVFTQGELPFYGLSD------EEVLNRLQAGKLELP--VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred HHHhCCCCCccccch------HHHHHHHHcCCcCCC--CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 9998 7888753221 122222221221111 112455679999999999999999999999999875
No 177
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.5e-39 Score=243.73 Aligned_cols=204 Identities=24% Similarity=0.424 Sum_probs=161.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++||||+++++++..+...+++|||+.+++|..++..... .++...++.++.|++.|++|||+.
T Consensus 49 ~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~-- 124 (262)
T cd05077 49 LAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSD--VLTTPWKFKVAKQLASALSYLEDK-- 124 (262)
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhhC--
Confidence 3677889999999999999999999998899999999999999988765432 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCc-------eEEeecccccccCCCCCCceecccccceeCCcccc-cCCcccchhhhhHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYE-------AHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLA 154 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~-------~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DiwslG~~l 154 (228)
|++|+||||+||+++.++. ++++|||.+...... ....++..|+|||.+. +..++.++||||||+++
T Consensus 125 -~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l 199 (262)
T cd05077 125 -DLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTL 199 (262)
T ss_pred -CeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHH
Confidence 9999999999999987654 899999988654322 2235677899999886 45688899999999999
Q ss_pred HHHH-hCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHh
Q 040501 155 LEVI-KGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226 (228)
Q Consensus 155 ~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 226 (228)
|+|+ .|..||...... ............ ....+.++.+++.+||+.||.+||++.++++.+
T Consensus 200 ~el~~~~~~p~~~~~~~-------~~~~~~~~~~~~----~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 200 WEICYNGEIPLKDKTLA-------EKERFYEGQCML----VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred HHHHhCCCCCCCCcchh-------HHHHHHhcCccC----CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 9997 588886532211 011111111111 112345788999999999999999999999876
No 178
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.9e-40 Score=240.31 Aligned_cols=214 Identities=23% Similarity=0.282 Sum_probs=170.1
Q ss_pred HHHHHHHHhccCCCccceeeeeeee--cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 5 FLREITVLTEIRHRNIVKFYGFCTH--ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 5 ~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
-.+||.+|.+++|||||.+-++... -+.+|+|||||.+ +|.+++.+-. +.+...++..++.|++.|++|||..
T Consensus 122 sLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~-- 196 (419)
T KOG0663|consen 122 SLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDN-- 196 (419)
T ss_pred hHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhc--
Confidence 3799999999999999999988754 3579999999976 8888887644 4589999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCC-cccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~~~~g~ 161 (228)
.|+|||||++|++++..|.+||+|||+++..+......+...-|..|+|||.+.+.. |+++.|+||+||++.|++.++
T Consensus 197 -wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~k 275 (419)
T KOG0663|consen 197 -WILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQK 275 (419)
T ss_pred -eeEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcC
Confidence 999999999999999999999999999999988877778888899999999988764 899999999999999999999
Q ss_pred CCccccccccCCCchhhh------------------hhhcCCCCCC--Cchh--hhhhHHHHHHHHHHhhccCCCCCCCH
Q 040501 162 HPRDFLSNVSSSNPNILV------------------NEMLDPRLPP--LSVD--IRGKVISIMEVAFLCLDNNPESRPNM 219 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~------------------~~~~~~~~~~--~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~ 219 (228)
+.|+...+.+..+..... .....+..+. .... ....++.-.+++..+|..||.+|.|+
T Consensus 276 Plf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA 355 (419)
T KOG0663|consen 276 PLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITA 355 (419)
T ss_pred CCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccH
Confidence 988755443221111100 0000000000 0000 01133566799999999999999999
Q ss_pred HHHHH
Q 040501 220 QTICQ 224 (228)
Q Consensus 220 ~~il~ 224 (228)
.+.++
T Consensus 356 ~~~L~ 360 (419)
T KOG0663|consen 356 EDGLK 360 (419)
T ss_pred HHhhc
Confidence 99875
No 179
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-40 Score=232.38 Aligned_cols=206 Identities=26% Similarity=0.402 Sum_probs=175.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
.++.+|+++-+.|+||||++++++|-+....|+++||...|.+...++.... ..+++...+.++.|++.|+.|+|..
T Consensus 67 ~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~-~~f~e~~~a~Yi~q~A~Al~y~h~k-- 143 (281)
T KOG0580|consen 67 HQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRM-KRFDEQRAATYIKQLANALLYCHLK-- 143 (281)
T ss_pred hhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhccc-ccccccchhHHHHHHHHHHHHhccC--
Confidence 4578999999999999999999999999999999999999999888875443 3388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
+++||||||+|++++..|.+|+.|||-+.... .....+.+||..|.+||+..+...+...|+|++|++.|+++.|.+
T Consensus 144 -~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p--~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~p 220 (281)
T KOG0580|consen 144 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLP 220 (281)
T ss_pred -CcccCCCCHHHhccCCCCCeeccCCCceeecC--CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999886543 445667899999999999999999999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||.... ..+...++...+.... ...+....++|.+|+..+|.+|.+..++.+
T Consensus 221 pFes~~------~~etYkrI~k~~~~~p----~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 221 PFESQS------HSETYKRIRKVDLKFP----STISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred chhhhh------hHHHHHHHHHccccCC----cccChhHHHHHHHHhccCccccccHHHHhh
Confidence 986433 2334444433332211 245557889999999999999999998875
No 180
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=8.2e-39 Score=241.23 Aligned_cols=204 Identities=26% Similarity=0.451 Sum_probs=163.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.+|+.+++.++|+||+++++++.. ...++|+||+++++|.+++..... .++...+..++.|++.||+|||+.
T Consensus 46 ~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~-- 120 (259)
T cd05037 46 LAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDK-- 120 (259)
T ss_pred HHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhC--
Confidence 578899999999999999999999987 778999999999999999876543 388899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCC-------ceEEeecccccccCCCCCCceecccccceeCCcccccC--CcccchhhhhHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEY-------EAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM--KVTAKCDVYSFGVL 153 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~-------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~ 153 (228)
|++|+||||+||+++.++ .++++|||.+..... .....++..|+|||++.+. .++.++|+||||++
T Consensus 121 -~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~ 195 (259)
T cd05037 121 -KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTT 195 (259)
T ss_pred -CeecccCccceEEEecCccccCCceeEEeCCCCccccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHH
Confidence 999999999999999887 799999999876543 1223456779999998876 68899999999999
Q ss_pred HHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 154 ALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 154 l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
+|++++ |..||...... ............+.. ....+.+++.+||..+|.+|||+.++++.|+
T Consensus 196 ~~~l~~~~~~p~~~~~~~------~~~~~~~~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 196 LLEICSNGEEPLSTLSSS------EKERFYQDQHRLPMP-----DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HHHHHhCCCCCcccCCch------hHHHHHhcCCCCCCC-----CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 999998 57776543211 111111111111111 1157889999999999999999999999874
No 181
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-39 Score=257.72 Aligned_cols=214 Identities=24% Similarity=0.288 Sum_probs=165.0
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+.+|+++++.++|+||+++++.+......|++||++. ++|.+++... ..+++..++.++.|++.||.|||+.
T Consensus 132 ~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~~--- 204 (392)
T PHA03207 132 TPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHGR--- 204 (392)
T ss_pred cHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 45789999999999999999999999999999999986 5777777433 2388999999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++||||||+||+++.++.++|+|||++......... .....|++.|+|||++.+..++.++|||||||++|+|++|.
T Consensus 205 givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~ 284 (392)
T PHA03207 205 GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKN 284 (392)
T ss_pred CccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999998765433222 22356899999999999888999999999999999999999
Q ss_pred CCccccccccCCCchhhh-----------------------hhhcCCCCCCCc----hhhhhhHHHHHHHHHHhhccCCC
Q 040501 162 HPRDFLSNVSSSNPNILV-----------------------NEMLDPRLPPLS----VDIRGKVISIMEVAFLCLDNNPE 214 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~ 214 (228)
.||............... ........+... ......+.++.++|++||..||.
T Consensus 285 ~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~ 364 (392)
T PHA03207 285 VTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQE 364 (392)
T ss_pred CCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChh
Confidence 998543221100000000 000000000000 00113355688999999999999
Q ss_pred CCCCHHHHHH
Q 040501 215 SRPNMQTICQ 224 (228)
Q Consensus 215 ~Rpt~~~il~ 224 (228)
+|||+.+++.
T Consensus 365 ~Rpsa~e~l~ 374 (392)
T PHA03207 365 FRPSAQDILS 374 (392)
T ss_pred hCCCHHHHhh
Confidence 9999999985
No 182
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4.5e-39 Score=249.40 Aligned_cols=210 Identities=22% Similarity=0.377 Sum_probs=167.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++|+||+++++++... ..+++++++.+++|.+++..... .++...++.++.|++.||+|||+.
T Consensus 54 ~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~-- 128 (316)
T cd05108 54 KEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEER-- 128 (316)
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHhc--
Confidence 5688899999999999999999998765 56799999999999999876542 378889999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCce--ecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT--EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
|++||||||+||+++.++.++|+|||++........... ....+..|++||.+.+..++.++||||||+++|++++
T Consensus 129 -~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~ 207 (316)
T cd05108 129 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTF 207 (316)
T ss_pred -CeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcC
Confidence 999999999999999999999999999987654333221 2233567999999988889999999999999999997
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|..||...... ............+. ...++..+.+++.+||..+|.+|||+.+++..|.
T Consensus 208 g~~p~~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~ 266 (316)
T cd05108 208 GSKPYDGIPAS------EISSILEKGERLPQ---PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 266 (316)
T ss_pred CCCCCCCCCHH------HHHHHHhCCCCCCC---CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 99997543211 11111111111111 1234456889999999999999999999998875
No 183
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4.5e-39 Score=244.05 Aligned_cols=214 Identities=24% Similarity=0.350 Sum_probs=163.9
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS--AEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
..+.+|+.++++++||||+++++.+.+....++||||+++++|.+++..... ....+...+..++.|++.|+.|||+.
T Consensus 40 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 119 (269)
T cd05087 40 MKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN 119 (269)
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 4678899999999999999999999988899999999999999999875322 22356677888999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccC-------CcccchhhhhHH
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTM-------KVTAKCDVYSFG 151 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~-------~~~~~~DiwslG 151 (228)
|++|+||||+||+++.++.++++|||.+......... .....++..|+|||++.+. .++.++|+||||
T Consensus 120 ---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG 196 (269)
T cd05087 120 ---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLG 196 (269)
T ss_pred ---CEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHH
Confidence 9999999999999999999999999988654322211 1223456789999987542 357799999999
Q ss_pred HHHHHHHh-CCCCccccccccCCCchhhhhhhcC---CCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 152 VLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLD---PRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 152 ~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
+++|+|++ |..||...... ........ ...+. .......+..+.+++.+|| .+|.+|||+++|+..|+
T Consensus 197 ~~l~el~~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 197 VTIWELFELGSQPYRHLSDE------QVLTYTVREQQLKLPK-PRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred HHHHHHHhCCCCCCCCCChH------HHHHHHhhcccCCCCC-CccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 99999996 99998643221 11111111 11111 1111234556889999999 68999999999999886
No 184
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.4e-39 Score=239.64 Aligned_cols=217 Identities=21% Similarity=0.292 Sum_probs=169.3
Q ss_pred HHHHHHHHhccCCCc-cceeeeeeeecC------eEEEEEEeecCCChhhhhhcCCCC-CCCCHHHHHHHHHHHHHHHHH
Q 040501 5 FLREITVLTEIRHRN-IVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSA-EELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 5 ~~~E~~~l~~l~h~~-i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~ 76 (228)
..+|+.+++.++|+| |+.+++++...+ .+++|+|++. .+|..++...... ..++...+..+++|++.||+|
T Consensus 57 aiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~ 135 (323)
T KOG0594|consen 57 AIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAF 135 (323)
T ss_pred hhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHH
Confidence 579999999999999 999999998776 8999999995 5888888765432 347778899999999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLAL 155 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~ 155 (228)
||+. +|+||||||+|++++++|.+||.|||++...+-+.........|..|+|||++.+. .|++..||||+||++.
T Consensus 136 ~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfa 212 (323)
T KOG0594|consen 136 LHSH---GILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFA 212 (323)
T ss_pred HHhC---CeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHH
Confidence 9999 99999999999999999999999999999776565556667788999999999887 6899999999999999
Q ss_pred HHHhCCCCccccccccC---------------CCchhhhhhh--cCCCCC---CCchhhhhhHHHHHHHHHHhhccCCCC
Q 040501 156 EVIKGKHPRDFLSNVSS---------------SNPNILVNEM--LDPRLP---PLSVDIRGKVISIMEVAFLCLDNNPES 215 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~---------------~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~ 215 (228)
||++++..|+.....+. ........+. ..+... ..............+++.+||+.+|.+
T Consensus 213 Em~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~ 292 (323)
T KOG0594|consen 213 EMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAK 292 (323)
T ss_pred HHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCccc
Confidence 99999998865433211 0000000000 001110 011111222246789999999999999
Q ss_pred CCCHHHHHHH
Q 040501 216 RPNMQTICQL 225 (228)
Q Consensus 216 Rpt~~~il~~ 225 (228)
|.|++.+++.
T Consensus 293 R~Sa~~al~h 302 (323)
T KOG0594|consen 293 RISAKGALTH 302 (323)
T ss_pred CcCHHHHhcC
Confidence 9999998863
No 185
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.9e-39 Score=255.13 Aligned_cols=209 Identities=20% Similarity=0.260 Sum_probs=165.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++||||+++++.+..+...|+||||+++++|.+++.... ++...+..++.|++.||.|||+.
T Consensus 88 ~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~~----~~~~~~~~~~~qi~~aL~~LH~~-- 161 (371)
T cd05622 88 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD----VPEKWARFYTAEVVLALDAIHSM-- 161 (371)
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHC--
Confidence 346789999999999999999999999999999999999999999986532 78888899999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCC-CceecccccceeCCcccccCC----cccchhhhhHHHHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS-NWTEFAGTYGYVAPELAYTMK----VTAKCDVYSFGVLALEV 157 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~----~~~~~DiwslG~~l~~~ 157 (228)
|++||||||+||+++.++.++|+|||++........ ......|++.|+|||++.+.. ++.++|||||||++|+|
T Consensus 162 -~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyel 240 (371)
T cd05622 162 -GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 240 (371)
T ss_pred -CEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHH
Confidence 999999999999999999999999999886543322 223456899999999987543 77899999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCC--CCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPES--RPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rpt~~~il~ 224 (228)
++|..||.... .......+...............+..+.++|.+||..++.+ |+++.++++
T Consensus 241 l~G~~Pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~ 303 (371)
T cd05622 241 LVGDTPFYADS------LVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 303 (371)
T ss_pred HhCCCCCCCCC------HHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhc
Confidence 99999986432 22223333322211111112345667889999999844433 788888876
No 186
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.8e-39 Score=250.97 Aligned_cols=215 Identities=27% Similarity=0.421 Sum_probs=167.8
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeee-cCeEEEEEEeecCCChhhhhhcCCC--------------------------
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTH-ARHSFLVYEYLENGSLSVILNNDTS-------------------------- 54 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~-------------------------- 54 (228)
+.+.+|+++++++ +|+||++++++|.. +..+++++||+.+++|.+++.....
T Consensus 55 ~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (337)
T cd05054 55 KALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLD 134 (337)
T ss_pred HHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccc
Confidence 4577899999999 79999999998864 4578899999999999998864221
Q ss_pred --------------------------------CCCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCc
Q 040501 55 --------------------------------AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE 102 (228)
Q Consensus 55 --------------------------------~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~ 102 (228)
...+++..+..++.|++.||.|||+. |++||||||+||+++.++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~ 211 (337)
T cd05054 135 SVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNV 211 (337)
T ss_pred cCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCc
Confidence 12478899999999999999999999 9999999999999999999
Q ss_pred eEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-CCCCccccccccCCCchhhh
Q 040501 103 AHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179 (228)
Q Consensus 103 ~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~ 179 (228)
++|+|||++......... .....++..|+|||++.+..++.++|||||||++|++++ |..||..... ....
T Consensus 212 vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~------~~~~ 285 (337)
T cd05054 212 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI------DEEF 285 (337)
T ss_pred EEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCc------cHHH
Confidence 999999999865432221 122344667999999999999999999999999999997 9999853211 1111
Q ss_pred hhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
............ ....+.++.+++.+||+.+|.+|||+.++++.|++
T Consensus 286 ~~~~~~~~~~~~--~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~ 332 (337)
T cd05054 286 CRRLKEGTRMRA--PEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGD 332 (337)
T ss_pred HHHHhccCCCCC--CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111111111110 12345678999999999999999999999999863
No 187
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=6.4e-39 Score=244.44 Aligned_cols=208 Identities=23% Similarity=0.393 Sum_probs=165.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++||||+++++++......++++||+++++|..+. .++...+..++.|++.|+.|||+.
T Consensus 44 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~-- 114 (279)
T cd06619 44 KQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL-- 114 (279)
T ss_pred HHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 46889999999999999999999999999999999999999886542 267888899999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++|+|||++...... ......++..|+|||.+.+..++.++|+||||+++|+|++|..
T Consensus 115 -~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~ 191 (279)
T cd06619 115 -KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRF 191 (279)
T ss_pred -CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999998765432 2233567889999999998889999999999999999999999
Q ss_pred CccccccccCC-CchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSS-NPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||......... ..............+... ....+.++.+++.+||+.+|.+||++.++++
T Consensus 192 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 192 PYPQIQKNQGSLMPLQLLQCIVDEDPPVLP--VGQFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred CchhhcccccccchHHHHHHHhccCCCCCC--CCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 98643221111 111111221111111111 1234557889999999999999999999875
No 188
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.1e-38 Score=243.23 Aligned_cols=210 Identities=22% Similarity=0.361 Sum_probs=165.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+..|+..+.++.||||+++++++.. ...++++|++.+++|.+++..... .+++..+..++.|++.|+.|||+.
T Consensus 54 ~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~-- 128 (279)
T cd05111 54 QEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLVTQLSPLGSLLDHVRQHRD--SLDPQRLLNWCVQIAKGMYYLEEH-- 128 (279)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEEECC-CccEEEEEeCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 356678888899999999999998754 467889999999999999975432 388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
|++|+||||+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.++||||||+++|++++
T Consensus 129 -~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~ 207 (279)
T cd05111 129 -RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSY 207 (279)
T ss_pred -CEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999765433221 223345678999999988889999999999999999998
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|..||...... .....+......... ..++.++.+++.+||..||.+|||+.++++.|.
T Consensus 208 g~~p~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~ 266 (279)
T cd05111 208 GAEPYAGMRPH------EVPDLLEKGERLAQP---QICTIDVYMVMVKCWMIDENVRPTFKELANEFT 266 (279)
T ss_pred CCCCCCCCCHH------HHHHHHHCCCcCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 99998643221 111111111111111 123456789999999999999999999999875
No 189
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.3e-38 Score=239.24 Aligned_cols=213 Identities=25% Similarity=0.391 Sum_probs=170.1
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++.+..|+++++++.|+||+++++++......++++|++++++|.+++..... .++...++.++.+++.++.+||+.
T Consensus 36 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~~- 112 (251)
T cd05041 36 KRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKN--RLTVKKLLQMSLDAAAGMEYLESK- 112 (251)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 35788999999999999999999999999999999999999999999865432 378899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc--eecccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW--TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
+++|+||+|+||+++.++.++|+|||.+.......... .....+..|+|||.+.+..++.++|+||||+++|++++
T Consensus 113 --~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t 190 (251)
T cd05041 113 --NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFS 190 (251)
T ss_pred --CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHh
Confidence 99999999999999999999999999987654222111 11223567999999888889999999999999999998
Q ss_pred -CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 160 -GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 160 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|..||..... ............... ....+..+.+++.+||..+|.+|||+.++++.|+.
T Consensus 191 ~~~~p~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 191 LGDTPYPGMSN------QQTRERIESGYRMPA---PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred ccCCCCccCCH------HHHHHHHhcCCCCCC---CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 8888754321 111111111111111 12345678999999999999999999999999863
No 190
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=5.2e-39 Score=241.97 Aligned_cols=209 Identities=25% Similarity=0.402 Sum_probs=172.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+++.+|+.++++++|+||+++++++......|+|+||+.+++|.+.+..... ..++..+++.++.|++.++.+||+.
T Consensus 44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~-- 120 (256)
T cd08218 44 EESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDR-- 120 (256)
T ss_pred HHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 4688999999999999999999999999999999999999999998865332 2378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++++|||.+..............+++.|+|||.+.+..++.++|+||||++++++++|..
T Consensus 121 -~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~ 199 (256)
T cd08218 121 -KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKH 199 (256)
T ss_pred -CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCC
Confidence 9999999999999999999999999998765543333333457788999999988888999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||... +.............+... ...+.++.++|.+||+.+|.+||++.++++
T Consensus 200 ~~~~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 200 AFEAG------NMKNLVLKIIRGSYPPVS---SHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred CccCC------CHHHHHHHHhcCCCCCCc---ccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 97532 222333333333332221 245667899999999999999999999986
No 191
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3e-39 Score=246.92 Aligned_cols=210 Identities=21% Similarity=0.266 Sum_probs=167.5
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+.+|+.++++++|++|+++++.+..+...|++|||+.+++|.+++..... ..++..++..++.|++.||.|||+.
T Consensus 46 ~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~--- 121 (285)
T cd05630 46 MALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQE--- 121 (285)
T ss_pred HHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 467899999999999999999999999999999999999999988864332 3488999999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p 163 (228)
|++|+||||+||+++.++.++|+|||++....... ......++..|+|||.+.+..++.++|+||+|+++|+|++|..|
T Consensus 122 ~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~P 200 (285)
T cd05630 122 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 200 (285)
T ss_pred CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999987644222 22334688999999999888899999999999999999999999
Q ss_pred ccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCC-----HHHHHH
Q 040501 164 RDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPN-----MQTICQ 224 (228)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----~~~il~ 224 (228)
|....... ............... .....+.++.+++.+||+.||.+||| +.++++
T Consensus 201 f~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 201 FQQRKKKI---KREEVERLVKEVQEE---YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred CCCCCccc---hHHHHHhhhhhhhhh---cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 86432110 001111111111000 11234557889999999999999999 788875
No 192
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=8.1e-39 Score=244.95 Aligned_cols=214 Identities=22% Similarity=0.376 Sum_probs=169.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC-------CCCCCHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-------AEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~l~ 75 (228)
..+.+|+.+++.++|+||+++++++......|++|||+.+++|.+++..... ....+...+..++.|++.||.
T Consensus 54 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 133 (288)
T cd05061 54 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 133 (288)
T ss_pred HHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 3577899999999999999999999988999999999999999999975321 233567788899999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHH
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVL 153 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~ 153 (228)
|||+. |++|+||||+||+++.++.++++|||.+......... .....++..|+|||.+.+..++.++|+||||++
T Consensus 134 ~lH~~---~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~ 210 (288)
T cd05061 134 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 210 (288)
T ss_pred HHHhC---CCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHH
Confidence 99999 9999999999999999999999999988754332221 112234667999999988889999999999999
Q ss_pred HHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 154 ALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 154 l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
+|+|++ |..||.... .......+......... ...+..+.+++.+||+.+|.+|||+.++++.|++
T Consensus 211 l~el~~~~~~p~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 277 (288)
T cd05061 211 LWEITSLAEQPYQGLS------NEQVLKFVMDGGYLDQP---DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 277 (288)
T ss_pred HHHHHhCCCCCCCCCC------HHHHHHHHHcCCCCCCC---CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 999998 788875322 12222222222222111 1335679999999999999999999999998864
No 193
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.6e-38 Score=242.02 Aligned_cols=206 Identities=26% Similarity=0.437 Sum_probs=169.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++++.|+||+++++.+..+...|+||||+++++|.+++..+ .++..++..++.|++.++.+||+.
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~-- 120 (277)
T cd06640 47 EDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHSE-- 120 (277)
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 45788999999999999999999999999999999999999999988643 278888999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
+++|+||+|+||+++.++.++++|||.+..............++..|+|||.+.+..++.++|+||||+++|+|++|..
T Consensus 121 -~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~ 199 (277)
T cd06640 121 -KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEP 199 (277)
T ss_pred -CccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCC
Confidence 9999999999999999999999999998766543333334457788999999988888999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||...... ...........+. .....+..+.+++.+||+.+|.+|||+.++++
T Consensus 200 p~~~~~~~------~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 200 PNSDMHPM------RVLFLIPKNNPPT---LTGEFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred CCCCcChH------hHhhhhhcCCCCC---CchhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 97543211 1111111111111 12345667899999999999999999999975
No 194
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=7.9e-39 Score=242.41 Aligned_cols=207 Identities=28% Similarity=0.465 Sum_probs=168.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++++......++++||+++++|.+++.... .++...+..++.|++.||.+||+.
T Consensus 51 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~-- 125 (267)
T cd06628 51 DALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNR-- 125 (267)
T ss_pred HHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhc--
Confidence 457889999999999999999999999999999999999999999997643 378889999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC------ceecccccceeCCcccccCCcccchhhhhHHHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN------WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 156 (228)
|++|+||+|+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.++|+||+|+++|+
T Consensus 126 -~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~ 204 (267)
T cd06628 126 -GIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVE 204 (267)
T ss_pred -CcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHH
Confidence 9999999999999999999999999988766522111 112346788999999988888999999999999999
Q ss_pred HHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 157 VIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+++|..||..... ............+... ...+..+.++|.+||+.+|.+||++.++++
T Consensus 205 l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 205 MLTGKHPFPDCTQ------LQAIFKIGENASPEIP---SNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HhhCCCCCCCccH------HHHHHHHhccCCCcCC---cccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 9999999864321 1111121111111111 234567899999999999999999999986
No 195
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.3e-39 Score=248.08 Aligned_cols=209 Identities=24% Similarity=0.432 Sum_probs=170.8
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++.+.+|+.+++.++||||+++++++..+...|+++||+++++|..++... .+++..++.++.|++.||.+||+.
T Consensus 62 ~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~- 136 (297)
T cd06659 62 RELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQT----RLNEEQIATVCESVLQALCYLHSQ- 136 (297)
T ss_pred HHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 356789999999999999999999999999999999999999999887542 378899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++|+|||++..............++..|+|||.+.+..++.++|+||+|+++|+|++|.
T Consensus 137 --~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~ 214 (297)
T cd06659 137 --GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGE 214 (297)
T ss_pred --CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999876544333334456788999999998888899999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.||..... ......+.. ............+..+.+++.+||+.+|.+|||+.++++
T Consensus 215 ~p~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 215 PPYFSDSP------VQAMKRLRD-SPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred CCCCCCCH------HHHHHHHhc-cCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 99853221 112222111 111111122345567889999999999999999999986
No 196
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=5.2e-40 Score=247.81 Aligned_cols=211 Identities=31% Similarity=0.512 Sum_probs=168.5
Q ss_pred HHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCC
Q 040501 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPP 84 (228)
Q Consensus 5 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~ 84 (228)
..+|+.++++++|+||+++++++......+++||++.+++|.+++... ..++...++.++.|++.||.+||+. |
T Consensus 45 ~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~Lh~~---~ 118 (260)
T PF00069_consen 45 NIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKN---KPLSEEEILKIAYQILEALAYLHSK---G 118 (260)
T ss_dssp HHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHH---SSBBHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hhhhhhcccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccc---c
Confidence 355999999999999999999999999999999999999999999732 2389999999999999999999999 9
Q ss_pred eeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccc-cCCcccchhhhhHHHHHHHHHhCCCC
Q 040501 85 IVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGKHP 163 (228)
Q Consensus 85 i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DiwslG~~l~~~~~g~~p 163 (228)
++|+||||+||+++.++.++|+|||.+..............++..|.|||.+. +..++.++|+||||+++|+|++|..|
T Consensus 119 i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p 198 (260)
T PF00069_consen 119 IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLP 198 (260)
T ss_dssp EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999876433333344567788999999988 77889999999999999999999999
Q ss_pred ccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 164 RDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|..... .+..........................+.+++.+||+.||++|||+.++++
T Consensus 199 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 199 FEESNS---DDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp STTSSH---HHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cccccc---hhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 864411 1111122222111111111111122368999999999999999999999975
No 197
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.3e-38 Score=239.83 Aligned_cols=211 Identities=28% Similarity=0.473 Sum_probs=169.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|++++++++++......++++||+.+++|.+++..... .+++..++.++.|++.++++||+.
T Consensus 44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~-- 119 (256)
T cd05112 44 EDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLESS-- 119 (256)
T ss_pred HHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 5788999999999999999999999998999999999999999999875432 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-C
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-G 160 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g 160 (228)
+++|+||+|+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.++|+||||+++|++++ |
T Consensus 120 -~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g 198 (256)
T cd05112 120 -NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEG 198 (256)
T ss_pred -CccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999988765432211 112234568999999988889999999999999999998 9
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
..||.... ................ ....+..+.+++.+||+.+|.+|||+.++++.|.
T Consensus 199 ~~p~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 199 KTPYENRS------NSEVVETINAGFRLYK---PRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred CCCCCcCC------HHHHHHHHhCCCCCCC---CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 99975322 1122222211111100 0123457899999999999999999999999874
No 198
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=5.3e-39 Score=244.66 Aligned_cols=206 Identities=27% Similarity=0.445 Sum_probs=169.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++.+..+...|+|+||+++++|.+++..+ .++...+..++.|++.|+.|||+.
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~-- 120 (277)
T cd06642 47 EDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPG----PLEETYIATILREILKGLDYLHSE-- 120 (277)
T ss_pred HHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhcC--
Confidence 46889999999999999999999999999999999999999999988642 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++++|||++..............++..|+|||.+.+..++.++|+||||+++|++++|..
T Consensus 121 -~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~ 199 (277)
T cd06642 121 -RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEP 199 (277)
T ss_pred -CeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999998765543333333457788999999988888999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||..... ............+.. ....+.++.+++.+||+.+|.+|||+.++++
T Consensus 200 p~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 200 PNSDLHP------MRVLFLIPKNSPPTL---EGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred CCcccch------hhHHhhhhcCCCCCC---CcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9753221 111111111111111 1234567889999999999999999999986
No 199
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.2e-38 Score=241.70 Aligned_cols=213 Identities=27% Similarity=0.511 Sum_probs=169.8
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.|..|+.+++.++||||+++++++..+...++++||+.+++|.+++.... ..+++.+++.++.|++.||.+||+.
T Consensus 49 ~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~- 125 (269)
T cd05065 49 RRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEM- 125 (269)
T ss_pred HHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 3578899999999999999999999999999999999999999999987543 2388999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecc---cccceeCCcccccCCcccchhhhhHHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFA---GTYGYVAPELAYTMKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~---~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 156 (228)
|++|+||+|+||+++.++.++++|||.+......... ..... .+..|+|||.+.+..++.++||||+|+++|+
T Consensus 126 --g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e 203 (269)
T cd05065 126 --NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE 203 (269)
T ss_pred --CEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHH
Confidence 9999999999999999999999999988755432211 11111 1347999999988889999999999999999
Q ss_pred HHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 157 VIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 157 ~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
+++ |..||..... ......+......+. ...++..+.+++.+||..+|.+||++.+++..|++
T Consensus 204 ~l~~g~~p~~~~~~------~~~~~~i~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 267 (269)
T cd05065 204 VMSYGERPYWDMSN------QDVINAIEQDYRLPP---PMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK 267 (269)
T ss_pred HhcCCCCCCCCCCH------HHHHHHHHcCCcCCC---cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 886 9999753321 112222211111111 12445678899999999999999999999999864
No 200
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.5e-38 Score=239.34 Aligned_cols=209 Identities=26% Similarity=0.413 Sum_probs=168.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.++++++|+|++++++++..+ ..+++|||+.+++|.+++..... ..++...++.++.|++.|+.+||+.
T Consensus 44 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~-- 119 (254)
T cd05083 44 QAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGR-ALVSVIQLLQFSLDVAEGMEYLESK-- 119 (254)
T ss_pred HHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 5688999999999999999999998654 47999999999999999875432 3478899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-CC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g~ 161 (228)
|++||||+|+||+++.++.++|+|||.+...... ......+..|+|||.+.+..++.++|+||||+++|++++ |.
T Consensus 120 -~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~ 195 (254)
T cd05083 120 -KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG---VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGR 195 (254)
T ss_pred -CeeccccCcceEEEcCCCcEEECCCccceecccc---CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999988754322 122234567999999988889999999999999999997 99
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
.||..... ......+........ ....+..+.+++.+||+.+|.+|||++++++.|++
T Consensus 196 ~p~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 196 APYPKMSL------KEVKECVEKGYRMEP---PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCCccCCH------HHHHHHHhCCCCCCC---CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 99864322 112222222211111 12456778999999999999999999999999875
No 201
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.6e-38 Score=239.86 Aligned_cols=212 Identities=25% Similarity=0.439 Sum_probs=169.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++.+.. ...++++||+++++|.+++..... ...++.+++.++.|++.||.+||+.
T Consensus 46 ~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~-- 121 (260)
T cd05073 46 EAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQR-- 121 (260)
T ss_pred HHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCc-cccCHHHHHHHHHHHHHHHHHHHhC--
Confidence 568899999999999999999999887 778999999999999999876432 3478889999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-C
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-G 160 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g 160 (228)
|++|+||+|+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.++|+||||+++|++++ |
T Consensus 122 -~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g 200 (260)
T cd05073 122 -NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 200 (260)
T ss_pred -CccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcC
Confidence 9999999999999999999999999988765432211 122334567999999988888999999999999999998 9
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
..||..... ......+........ ....+.++.+++.+||+.+|++|||+.++++.|+.
T Consensus 201 ~~p~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 201 RIPYPGMSN------PEVIRALERGYRMPR---PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCCCCCCCH------HHHHHHHhCCCCCCC---cccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 999864321 112222211111111 12455678999999999999999999999999863
No 202
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.1e-38 Score=246.35 Aligned_cols=213 Identities=23% Similarity=0.373 Sum_probs=166.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-CC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH-DC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~ 81 (228)
.++.+|++++++++||||+++++.|..+...++++||+++++|.+++... ..++...+..++.|+++||.|||+ .
T Consensus 44 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~- 119 (308)
T cd06615 44 NQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKH- 119 (308)
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhC-
Confidence 45789999999999999999999999999999999999999999998754 237889999999999999999997 5
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
+++|+||+|+||+++.++.++|+|||.+....... .....++..|+|||.+.+..++.++|+||||+++|++++|.
T Consensus 120 --~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~ 195 (308)
T cd06615 120 --KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGR 195 (308)
T ss_pred --CEEECCCChHHEEEecCCcEEEccCCCcccccccc--cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCC
Confidence 89999999999999999999999999886543221 23346788999999988888899999999999999999999
Q ss_pred CCccccccccCCCch------------------------------hhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhcc
Q 040501 162 HPRDFLSNVSSSNPN------------------------------ILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDN 211 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 211 (228)
.||............ ...........+..+ ...++.++.+++.+||..
T Consensus 196 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~ 273 (308)
T cd06615 196 YPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLP--SGAFSDEFQDFVDKCLKK 273 (308)
T ss_pred CCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCc--CcccCHHHHHHHHHHccC
Confidence 997532211000000 000000000000000 012456789999999999
Q ss_pred CCCCCCCHHHHHHH
Q 040501 212 NPESRPNMQTICQL 225 (228)
Q Consensus 212 ~p~~Rpt~~~il~~ 225 (228)
+|.+|||+.++++.
T Consensus 274 ~P~~Rpt~~~ll~~ 287 (308)
T cd06615 274 NPKERADLKELTKH 287 (308)
T ss_pred ChhhCcCHHHHhcC
Confidence 99999999999864
No 203
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=6.9e-39 Score=243.61 Aligned_cols=205 Identities=25% Similarity=0.413 Sum_probs=160.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.+|+.+++.++|+||+++++++..+...++||||+++++|..++..... .+++..+..++.|++.||+|||+.
T Consensus 61 ~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~-- 136 (274)
T cd05076 61 LAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVAQQLASALSYLEDK-- 136 (274)
T ss_pred HHHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHcC--
Confidence 4577899999999999999999999999999999999999999998865332 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCC-------ceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEY-------EAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLA 154 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~-------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l 154 (228)
|++|+||||+||+++..+ .++++|||.+...... ....++..|+|||.+.+ ..++.++|+||||+++
T Consensus 137 -~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l 211 (274)
T cd05076 137 -NLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTL 211 (274)
T ss_pred -CccCCCCCcccEEEeccCcccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHH
Confidence 999999999999997643 3799999987543221 12346678999998865 4578899999999999
Q ss_pred HHHH-hCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 155 LEVI-KGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 155 ~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|+++ +|..||....... ....... ....+. .....+.++|.+||+.+|.+|||+.++++.|+
T Consensus 212 ~el~~~g~~p~~~~~~~~---~~~~~~~--~~~~~~------~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 212 LEICFDGEVPLKERTPSE---KERFYEK--KHRLPE------PSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHhCCCCCccccChHH---HHHHHHh--ccCCCC------CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 9984 6899875332111 0011110 011111 12236889999999999999999999999874
No 204
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.1e-38 Score=242.08 Aligned_cols=211 Identities=24% Similarity=0.389 Sum_probs=168.8
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++.+.+|+++++.+.|+||+++++++.. ...|++||++++++|.+++..... .+++.+++.++.+++.||+|||+.
T Consensus 51 ~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~- 126 (270)
T cd05056 51 REKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLESK- 126 (270)
T ss_pred HHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 3568899999999999999999998875 457899999999999999976433 378999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
|++|+||+|+||+++.++.++++|||++......... .....++..|+|||.+....++.++|+||||+++|++++
T Consensus 127 --~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~ 204 (270)
T cd05056 127 --RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILML 204 (270)
T ss_pred --CeeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHc
Confidence 9999999999999999999999999998765433221 112233467999999888888999999999999999986
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|..||...... .....+........ ....+..+.+++.+||..+|.+|||+.++++.|+
T Consensus 205 g~~pf~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~ 263 (270)
T cd05056 205 GVKPFQGVKNN------DVIGRIENGERLPM---PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLS 263 (270)
T ss_pred CCCCCCCCCHH------HHHHHHHcCCcCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 99998643221 11222222111111 1245567999999999999999999999999886
No 205
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.1e-38 Score=243.72 Aligned_cols=218 Identities=24% Similarity=0.399 Sum_probs=168.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec--CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
+.+.+|+++++.++|+||+++.+++... ...+++|||+++++|.+++..... .+++..++.++.|++.||+|||+.
T Consensus 51 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH~~ 128 (284)
T cd05079 51 ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLGSR 128 (284)
T ss_pred HHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4688999999999999999999998764 578999999999999999865432 378999999999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC---ceecccccceeCCcccccCCcccchhhhhHHHHHHHH
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN---WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~ 157 (228)
|++|+||||+||+++.++.++|+|||.+......... .....++..|+|||.+.+..++.++||||||+++|++
T Consensus 129 ---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el 205 (284)
T cd05079 129 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYEL 205 (284)
T ss_pred ---CeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhh
Confidence 9999999999999999999999999998865433221 1223456679999998888889999999999999999
Q ss_pred HhCCCCccccccc--------cC-CCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 158 IKGKHPRDFLSNV--------SS-SNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 158 ~~g~~p~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
+++..|....... .. ................+ ....++..+.+++.+||+.||.+|||++++++.|++
T Consensus 206 lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 206 LTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLP---RPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred hcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCC---CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence 9977653211000 00 00000111111111111 112456689999999999999999999999998863
No 206
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4.6e-39 Score=243.39 Aligned_cols=213 Identities=25% Similarity=0.433 Sum_probs=172.7
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-C
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH-D 80 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~ 80 (228)
++.+.+|++++++++|+||+++++.+......++++|++.+++|.+++.... ..++...+..++.|++.++++||+ .
T Consensus 43 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~ 120 (265)
T cd06605 43 QKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKH 120 (265)
T ss_pred HHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 3568899999999999999999999999999999999999999999987643 348889999999999999999999 8
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhC
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g 160 (228)
|++|+||+|+||+++.++.++|+|||.+......... ...++..|+|||.+.+..++.++|+||||+++|++++|
T Consensus 121 ---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g 195 (265)
T cd06605 121 ---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK--TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATG 195 (265)
T ss_pred ---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh--cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhC
Confidence 9999999999999999999999999988765322211 15677889999999888899999999999999999999
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
..||...... ................+..... ..+..+.++|.+||..||.+|||+.+++.
T Consensus 196 ~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 196 RFPYPPENDP-PDGIFELLQYIVNEPPPRLPSG--KFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred CCCCCccccc-cccHHHHHHHHhcCCCCCCChh--hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 9998643221 1112222333333322222211 25667899999999999999999999875
No 207
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.1e-39 Score=247.64 Aligned_cols=209 Identities=25% Similarity=0.428 Sum_probs=169.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++|+||+++++.+..+...|+++|++++++|.+++... .++..++..++.|++.|+.|||+.
T Consensus 64 ~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~-- 137 (292)
T cd06658 64 ELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQ-- 137 (292)
T ss_pred HHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 46789999999999999999999999999999999999999999988543 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++|+|||++..............++..|+|||.+.+..++.++|+||+|+++|++++|..
T Consensus 138 -~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~ 216 (292)
T cd06658 138 -GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP 216 (292)
T ss_pred -CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999998765433333344567889999999988888999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
||..... ......... ..+.........+..+.+++.+||..||.+|||+.++++.
T Consensus 217 p~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 217 PYFNEPP------LQAMRRIRD-NLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CCCCCCH------HHHHHHHHh-cCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 9853221 111111111 1111111112345578899999999999999999999863
No 208
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=7e-39 Score=244.96 Aligned_cols=213 Identities=23% Similarity=0.387 Sum_probs=167.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+|++++++++......++++||+++++|..+..... .+++..+..++.|++.+|.|||+.
T Consensus 45 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~~-- 119 (286)
T cd07847 45 KIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHKH-- 119 (286)
T ss_pred HHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 457889999999999999999999999999999999999988887765432 388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++|+|||++..............++..|+|||.+.+ ..++.++|+||+|+++|+|++|.
T Consensus 120 -~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~ 198 (286)
T cd07847 120 -NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQ 198 (286)
T ss_pred -CceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999876544333334456788999998866 45788999999999999999999
Q ss_pred CCccccccccCCCchhhhhh---------------------hcCCCCC---CCchhhhhhHHHHHHHHHHhhccCCCCCC
Q 040501 162 HPRDFLSNVSSSNPNILVNE---------------------MLDPRLP---PLSVDIRGKVISIMEVAFLCLDNNPESRP 217 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~---------------------~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 217 (228)
.||........ ...... ...+... +........+..+.+++.+||+.+|.+||
T Consensus 199 ~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 275 (286)
T cd07847 199 PLWPGKSDVDQ---LYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERL 275 (286)
T ss_pred CCCCCCChHHH---HHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccC
Confidence 99864332110 000000 0000000 00011234466789999999999999999
Q ss_pred CHHHHHH
Q 040501 218 NMQTICQ 224 (228)
Q Consensus 218 t~~~il~ 224 (228)
|+.+++.
T Consensus 276 ~~~eil~ 282 (286)
T cd07847 276 SCEELLE 282 (286)
T ss_pred CHHHHhc
Confidence 9999875
No 209
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.1e-38 Score=241.78 Aligned_cols=212 Identities=26% Similarity=0.372 Sum_probs=166.0
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+||+++++++..+...++++|++.+++|.+++.........+...+..++.|++.|++|||+.
T Consensus 50 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-- 127 (268)
T cd06624 50 QPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN-- 127 (268)
T ss_pred HHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC--
Confidence 467899999999999999999999999999999999999999999987543221237788889999999999999999
Q ss_pred CCeeecCCCCCceEEcC-CCceEEeecccccccCCCCCCceecccccceeCCcccccCC--cccchhhhhHHHHHHHHHh
Q 040501 83 PPIVHRDISSKNVLLDL-EYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMK--VTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~DiwslG~~l~~~~~ 159 (228)
|++|+||+|+||+++. ++.++|+|||.+..............+++.|+|||.+.+.. ++.++|+||+|+++|++++
T Consensus 128 -~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~ 206 (268)
T cd06624 128 -QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMAT 206 (268)
T ss_pred -CEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHh
Confidence 9999999999999976 67899999999876543333333345788999999886543 7889999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|..||....... ............+.. ......++.+++.+||+.+|.+|||+.++++
T Consensus 207 g~~p~~~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 207 GKPPFIELGEPQ----AAMFKVGMFKIHPEI---PESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CCCCCccccChh----hhHhhhhhhccCCCC---CcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 999985322111 001111111111111 1234567889999999999999999999975
No 210
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.4e-38 Score=239.96 Aligned_cols=204 Identities=26% Similarity=0.453 Sum_probs=162.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+..|+.+++.++||||+++++++..+...++||||+.+++|.+++..+.. .+++..++.++.|++.|++|||+.
T Consensus 44 ~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~-- 119 (258)
T cd05078 44 ESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLEDK-- 119 (258)
T ss_pred HHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 4678899999999999999999999998899999999999999999876543 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCc--------eEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYE--------AHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVL 153 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~--------~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~ 153 (228)
|++|+||||+||+++.++. ++++|||.+...... ....++..|+|||.+.+. .++.++|+||||++
T Consensus 120 -~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~ 194 (258)
T cd05078 120 -GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK----EILLERIPWVPPECIENPQNLSLAADKWSFGTT 194 (258)
T ss_pred -CeecCCCccceEEEecccccccCCCceEEecccccccccCCc----hhccccCCccCchhccCCCCCCchhhHHHHHHH
Confidence 9999999999999987765 589999987654321 224567789999998764 47889999999999
Q ss_pred HHHHHhCC-CCccccccccCCCchhhhhhh-cCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 154 ALEVIKGK-HPRDFLSNVSSSNPNILVNEM-LDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 154 l~~~~~g~-~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
+|++++|. .|+...... ...... .....+. ..+.++.+++.+||+.||.+|||++++++.|.
T Consensus 195 l~~l~~g~~~~~~~~~~~------~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 195 LWEIFSGGDKPLSALDSQ------KKLQFYEDRHQLPA------PKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHHcCCCCChhhccHH------HHHHHHHccccCCC------CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 99999984 554322111 111100 0111111 23346889999999999999999999999874
No 211
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1e-38 Score=244.04 Aligned_cols=208 Identities=23% Similarity=0.416 Sum_probs=170.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++|+||+++++++......++++||+.+++|.+++... .++...+..++.|++.++++||+.
T Consensus 61 ~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~-- 134 (285)
T cd06648 61 ELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIATVCLAVLKALSFLHAQ-- 134 (285)
T ss_pred HHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 45789999999999999999999999999999999999999999998752 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++|+|||.+..............+++.|+|||.+.+..++.++|+||+|+++|++++|..
T Consensus 135 -~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~ 213 (285)
T cd06648 135 -GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEP 213 (285)
T ss_pred -CeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999987765433333334567889999999988888999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||.... ............ +.........+..+.+++.+||..+|.+|||+.++++
T Consensus 214 p~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 214 PYFNEP------PLQAMKRIRDNL-PPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CCcCCC------HHHHHHHHHhcC-CCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 975322 112222222221 1111112235567999999999999999999999985
No 212
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.2e-38 Score=241.29 Aligned_cols=213 Identities=27% Similarity=0.466 Sum_probs=172.9
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++.++.++|+||+++++.+......|+++|++.+++|.+++........+++..+..++.|++.|+.+||+.
T Consensus 44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~-- 121 (267)
T cd06610 44 DELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN-- 121 (267)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 567899999999999999999999999999999999999999999997654334588999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC----ceecccccceeCCcccccC-CcccchhhhhHHHHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN----WTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~ 157 (228)
|++|+||+|+||++++++.++|+|||.+......... .....++..|+|||++... .++.++|+||||+++|+|
T Consensus 122 -~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l 200 (267)
T cd06610 122 -GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIEL 200 (267)
T ss_pred -CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHH
Confidence 9999999999999999999999999988766543322 1234577889999988776 688899999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCCCCCchh--hhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVD--IRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++|+.||...... ...........+..... ....+..+.+++.+||..||.+|||+.++++
T Consensus 201 ~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 201 ATGAAPYSKYPPM------KVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred HhCCCCccccChh------hhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 9999998643221 12222222222111111 2356678899999999999999999999986
No 213
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.1e-39 Score=245.91 Aligned_cols=208 Identities=25% Similarity=0.416 Sum_probs=168.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++|+||+++++++..+...|+|+||+++++|.+++... .++..++..++.|++.+|.+||+.
T Consensus 61 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~-- 134 (297)
T cd06656 61 ELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSN-- 134 (297)
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 46788999999999999999999999999999999999999999998643 278889999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++|+|||.+..............+++.|+|||.+.+..++.++|+||+|+++|++++|..
T Consensus 135 -~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~ 213 (297)
T cd06656 135 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 213 (297)
T ss_pred -CcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999998765443333334567889999999988888999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||....... ..........+. .......+..+.+++.+||..+|.+|||++++++
T Consensus 214 pf~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 214 PYLNENPLR------ALYLIATNGTPE-LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCCCCCcch------heeeeccCCCCC-CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 985332211 111111111111 1112234566889999999999999999999986
No 214
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.3e-38 Score=247.01 Aligned_cols=160 Identities=23% Similarity=0.388 Sum_probs=131.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeee--cCeEEEEEEeecCCChhhhhhcCC------CCCCCCHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTH--ARHSFLVYEYLENGSLSVILNNDT------SAEELGWSRRINVIKGIAHAL 74 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~~~l~~~l 74 (228)
..+.+|++++++++||||+++++.+.. +...|+++|++.+ +|.+++.... ....++...+..++.|++.||
T Consensus 43 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al 121 (317)
T cd07868 43 MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI 121 (317)
T ss_pred HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHH
Confidence 357889999999999999999999854 4578999999864 7777765321 122478899999999999999
Q ss_pred HHhhhCCCCCeeecCCCCCceEE----cCCCceEEeecccccccCCCCCC---ceecccccceeCCcccccC-Ccccchh
Q 040501 75 SYLHHDCIPPIVHRDISSKNVLL----DLEYEAHVSDFGIAKFIQPDSSN---WTEFAGTYGYVAPELAYTM-KVTAKCD 146 (228)
Q Consensus 75 ~~lh~~~~~~i~h~di~p~nil~----~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~D 146 (228)
.|||+. |++||||||+||++ +.++.+||+|||++......... .....+++.|+|||++.+. .++.++|
T Consensus 122 ~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~D 198 (317)
T cd07868 122 HYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAID 198 (317)
T ss_pred HHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhh
Confidence 999999 99999999999999 45578999999999765433221 2335678899999998764 5788999
Q ss_pred hhhHHHHHHHHHhCCCCccc
Q 040501 147 VYSFGVLALEVIKGKHPRDF 166 (228)
Q Consensus 147 iwslG~~l~~~~~g~~p~~~ 166 (228)
+||+||++|+|++|.+||..
T Consensus 199 iwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 199 IWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred HHHHHHHHHHHHhCCCCccC
Confidence 99999999999999999864
No 215
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.6e-38 Score=239.38 Aligned_cols=212 Identities=29% Similarity=0.482 Sum_probs=172.1
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+..|+.+++.++|+||+++++++......+++||++.+++|.+++...... .+++.++..++.|++.+|++||+.
T Consensus 45 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~- 122 (258)
T smart00219 45 IEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLESK- 122 (258)
T ss_pred HHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHhcC-
Confidence 457889999999999999999999999999999999999999999998754321 278999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCce-ecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT-EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
|++|+||+|+||+++.++.++++|||.+........... ...+++.|+|||.+.+..++.++|+||||+++|+|++
T Consensus 123 --~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~ 200 (258)
T smart00219 123 --NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTL 200 (258)
T ss_pred --CeeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhC
Confidence 999999999999999999999999999887654322211 1235678999999888888999999999999999998
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHh
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 226 (228)
|..||... .................. ...+.++.+++.+||..+|.+|||+.++++.|
T Consensus 201 g~~p~~~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 201 GESPYPGM------SNEEVLEYLKKGYRLPKP---ENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCCCCCC------CHHHHHHHHhcCCCCCCC---CcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 78887532 222222233222222211 23566799999999999999999999999875
No 216
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-38 Score=248.06 Aligned_cols=214 Identities=23% Similarity=0.404 Sum_probs=170.8
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCC-------------CCCCCCHHHHHHHHH
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT-------------SAEELGWSRRINVIK 68 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-------------~~~~~~~~~~~~~~~ 68 (228)
+.+.+|+++++++ +|+||+++++++......++++||+++++|.+++.... ....+++.+++.++.
T Consensus 62 ~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 141 (334)
T cd05100 62 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAY 141 (334)
T ss_pred HHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHH
Confidence 4678999999999 79999999999999999999999999999999987532 123477888999999
Q ss_pred HHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchh
Q 040501 69 GIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCD 146 (228)
Q Consensus 69 ~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~D 146 (228)
|++.||+|||+. |++|+||||+||+++.++.++|+|||++......... .....++..|+|||.+.+..++.++|
T Consensus 142 qi~~al~~LH~~---givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 218 (334)
T cd05100 142 QVARGMEYLASQ---KCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD 218 (334)
T ss_pred HHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhh
Confidence 999999999999 9999999999999999999999999998765432211 11123346799999998888999999
Q ss_pred hhhHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 147 VYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 147 iwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
|||||+++|+|++ |..||.... .......+......... ...+..+.+++.+||+.+|.+|||+.++++.
T Consensus 219 i~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 219 VWSFGVLLWEIFTLGGSPYPGIP------VEELFKLLKEGHRMDKP---ANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred hHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHcCCCCCCC---CCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 9999999999998 888875332 22222222222211111 2345578899999999999999999999998
Q ss_pred hhC
Q 040501 226 LCK 228 (228)
Q Consensus 226 l~~ 228 (228)
|++
T Consensus 290 l~~ 292 (334)
T cd05100 290 LDR 292 (334)
T ss_pred HHH
Confidence 863
No 217
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8.5e-39 Score=251.91 Aligned_cols=212 Identities=22% Similarity=0.343 Sum_probs=159.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec------CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA------RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (228)
+.+.+|+.+++.++||||+++++++... ...|+||||+.+ +|...+.. .++...+..++.|++.||.|
T Consensus 65 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~ 138 (359)
T cd07876 65 KRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKH 138 (359)
T ss_pred HHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHH
Confidence 4577899999999999999999998644 357999999976 45555432 27788889999999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 156 (228)
||+. |++||||||+||+++.++.++|+|||++...... .......+++.|+|||.+.+..++.++||||||+++|+
T Consensus 139 LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~e 214 (359)
T cd07876 139 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 214 (359)
T ss_pred HHhC---CcccCCCCHHHEEECCCCCEEEecCCCccccccC-ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHH
Confidence 9999 9999999999999999999999999998754322 12233467889999999999899999999999999999
Q ss_pred HHhCCCCccccccccC---------CCchh-------hhhhhc--CCCCCC--------------CchhhhhhHHHHHHH
Q 040501 157 VIKGKHPRDFLSNVSS---------SNPNI-------LVNEML--DPRLPP--------------LSVDIRGKVISIMEV 204 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~---------~~~~~-------~~~~~~--~~~~~~--------------~~~~~~~~~~~~~~l 204 (228)
|++|..||........ ..... ...... .+..+. ........+..+.++
T Consensus 215 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 294 (359)
T cd07876 215 LVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDL 294 (359)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHH
Confidence 9999999864322110 00000 000000 000000 000011224568899
Q ss_pred HHHhhccCCCCCCCHHHHHH
Q 040501 205 AFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 205 i~~~l~~~p~~Rpt~~~il~ 224 (228)
|.+||..||.+|||++|+++
T Consensus 295 i~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 295 LSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHhccCcccCCCHHHHhc
Confidence 99999999999999999986
No 218
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=7.6e-39 Score=260.50 Aligned_cols=210 Identities=25% Similarity=0.320 Sum_probs=169.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecC--------eEEEEEEeecCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR--------HSFLVYEYLENGSLSVILNNDT-SAEELGWSRRINVIKGIAHA 73 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~l~~~ 73 (228)
..+.+|+..+..++|+||+++.+.+.... ..++||||+.+++|.+++.... ....+++..+..++.|++.|
T Consensus 76 ~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~a 155 (496)
T PTZ00283 76 NRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLA 155 (496)
T ss_pred HHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHH
Confidence 46788999999999999999988775322 3689999999999999886532 23458899999999999999
Q ss_pred HHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCC--CceecccccceeCCcccccCCcccchhhhhHH
Q 040501 74 LSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS--NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFG 151 (228)
Q Consensus 74 l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG 151 (228)
|.|||+. |++||||||+||+++.++.+||+|||++........ ......|++.|+|||++.+..++.++||||||
T Consensus 156 L~~lH~~---~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlG 232 (496)
T PTZ00283 156 VHHVHSK---HMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLG 232 (496)
T ss_pred HHHHHhC---CEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHH
Confidence 9999999 999999999999999999999999999876543211 12345689999999999998899999999999
Q ss_pred HHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 152 VLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 152 ~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+++|+|++|..||... .................+ ...+.++.+++.+||+.||.+|||+.++++
T Consensus 233 vilyeLltG~~Pf~~~------~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 233 VLLYELLTLKRPFDGE------NMEEVMHKTLAGRYDPLP---PSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred HHHHHHHHCCCCCCCC------CHHHHHHHHhcCCCCCCC---CCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 9999999999998532 222333333333332221 245667899999999999999999999875
No 219
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.6e-38 Score=247.46 Aligned_cols=218 Identities=20% Similarity=0.283 Sum_probs=162.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++||||++++++|..+...|+|+||+++++|.+++..+.. ..+++..++.++.|++.||+|||+.
T Consensus 44 ~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~-- 120 (327)
T cd08227 44 TFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHM-- 120 (327)
T ss_pred HHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 3567899999999999999999999999999999999999999999865432 2388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-------ceecccccceeCCccccc--CCcccchhhhhHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-------WTEFAGTYGYVAPELAYT--MKVTAKCDVYSFGVL 153 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~~ 153 (228)
|++|+||||+||+++.++.++++||+........... .....++..|+|||++.+ ..++.++|||||||+
T Consensus 121 -~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~i 199 (327)
T cd08227 121 -GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGIT 199 (327)
T ss_pred -CEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHH
Confidence 9999999999999999999999999854432211110 111245667999999876 358899999999999
Q ss_pred HHHHHhCCCCccccccccCCCch--hhhhhhc-------------------C-----------CCC----CCCchhhhhh
Q 040501 154 ALEVIKGKHPRDFLSNVSSSNPN--ILVNEML-------------------D-----------PRL----PPLSVDIRGK 197 (228)
Q Consensus 154 l~~~~~g~~p~~~~~~~~~~~~~--~~~~~~~-------------------~-----------~~~----~~~~~~~~~~ 197 (228)
+|++++|..||............ ....... + ... ..........
T Consensus 200 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (327)
T cd08227 200 ACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTF 279 (327)
T ss_pred HHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCccccccccc
Confidence 99999999998642211000000 0000000 0 000 0000011234
Q ss_pred HHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 198 VISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 198 ~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+..+.+++.+||+.||.+|||++++++
T Consensus 280 ~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 280 SPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred CHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 567899999999999999999999986
No 220
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1e-38 Score=243.71 Aligned_cols=220 Identities=26% Similarity=0.418 Sum_probs=171.1
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeee--cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTH--ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH 79 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 79 (228)
.+.|.+|+++++.+.|+||+++++++.. ....++++||+.+++|.+++..... .+++..++.++.|++.||++||+
T Consensus 50 ~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~ 127 (284)
T cd05038 50 RSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGS 127 (284)
T ss_pred HHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHh
Confidence 3578999999999999999999999877 5688999999999999999976543 38899999999999999999999
Q ss_pred CCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCce---ecccccceeCCcccccCCcccchhhhhHHHHHHH
Q 040501 80 DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 80 ~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 156 (228)
. |++|+||+|+||+++.++.++|+|||.+........... ...++..|++||.+.+..++.++|+||||+++|+
T Consensus 128 ~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~e 204 (284)
T cd05038 128 Q---RYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYE 204 (284)
T ss_pred C---CeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhhe
Confidence 9 999999999999999999999999999987653322211 1234556999999988888999999999999999
Q ss_pred HHhCCCCccccccccCC--------CchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 157 VIKGKHPRDFLSNVSSS--------NPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|++|..|+......... ................. ....++.++.+++.+||+.+|.+|||+.++++.|++
T Consensus 205 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05038 205 LFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLP--RPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR 282 (284)
T ss_pred eeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCC--CCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence 99999987532211100 00111111111111100 012345679999999999999999999999999874
No 221
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1e-38 Score=245.86 Aligned_cols=216 Identities=18% Similarity=0.258 Sum_probs=164.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.+|+.+++.++|+||+++++++......++|+||+. ++|.+++..... .+++..+..++.|++.||.+||+.
T Consensus 49 ~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~lH~~-- 123 (301)
T cd07873 49 CTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGN--SINMHNVKLFLFQLLRGLNYCHRR-- 123 (301)
T ss_pred hHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 356789999999999999999999999999999999997 478887765432 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++|+|||.+..............+++.|+|||.+.+. .++.++||||||+++|+|++|.
T Consensus 124 -~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 202 (301)
T cd07873 124 -KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGR 202 (301)
T ss_pred -CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999987654333333334568899999987654 4788999999999999999999
Q ss_pred CCccccccccCC---------Cchhhhhhhc------CCCCCCC-----chhhhhhHHHHHHHHHHhhccCCCCCCCHHH
Q 040501 162 HPRDFLSNVSSS---------NPNILVNEML------DPRLPPL-----SVDIRGKVISIMEVAFLCLDNNPESRPNMQT 221 (228)
Q Consensus 162 ~p~~~~~~~~~~---------~~~~~~~~~~------~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 221 (228)
+||......... .......... ....+.. .......+..+.++|.+||+.||.+|||+++
T Consensus 203 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~e 282 (301)
T cd07873 203 PLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEE 282 (301)
T ss_pred CCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHH
Confidence 998643211000 0000000000 0000100 0011234567889999999999999999999
Q ss_pred HHH
Q 040501 222 ICQ 224 (228)
Q Consensus 222 il~ 224 (228)
+++
T Consensus 283 il~ 285 (301)
T cd07873 283 AMK 285 (301)
T ss_pred Hhc
Confidence 986
No 222
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-39 Score=254.14 Aligned_cols=212 Identities=24% Similarity=0.415 Sum_probs=180.3
Q ss_pred ChHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 1 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
|++.|+.|+.+++.+.||||++++++|.+. ..|||||.++-|.|..++..+... ++......++.|++.|++|||+.
T Consensus 434 ~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmEL~~~GELr~yLq~nk~s--L~l~tL~ly~~Qi~talaYLeSk 510 (974)
T KOG4257|consen 434 DTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVMELAPLGELREYLQQNKDS--LPLRTLTLYCYQICTALAYLESK 510 (974)
T ss_pred hHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEecccchhHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHhh
Confidence 467899999999999999999999999875 689999999999999999876654 88899999999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCce-ecccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT-EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
+.+||||...||+++....+|++|||+++.+........ ...-+.-|||||.+.-..++.+||||.||+.+||++.
T Consensus 511 ---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~ 587 (974)
T KOG4257|consen 511 ---RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILS 587 (974)
T ss_pred ---chhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999998876554432 2334668999999999999999999999999999986
Q ss_pred -CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 160 -GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 160 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|..||++...- +.+..+..+...+.+ .++++.++.++.+||..+|.+||++.++...|.
T Consensus 588 lGvkPfqgvkNs------DVI~~iEnGeRlP~P---~nCPp~LYslmskcWayeP~kRPrftei~~~ls 647 (974)
T KOG4257|consen 588 LGVKPFQGVKNS------DVIGHIENGERLPCP---PNCPPALYSLMSKCWAYEPSKRPRFTEIKAILS 647 (974)
T ss_pred hcCCcccccccc------ceEEEecCCCCCCCC---CCCChHHHHHHHHHhccCcccCCcHHHHHHHHH
Confidence 99998754332 233444444433332 367778999999999999999999999988764
No 223
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-39 Score=247.79 Aligned_cols=206 Identities=22% Similarity=0.357 Sum_probs=175.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..++.|+..|+.++|||||+++++...+..+|+|+|.-++|+|+++|-.+..+ +.+.-+.+++.||+.||.|+|+.
T Consensus 62 ~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~G--l~E~La~kYF~QI~~AI~YCHqL-- 137 (864)
T KOG4717|consen 62 GHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEG--LNEDLAKKYFAQIVHAISYCHQL-- 137 (864)
T ss_pred hHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhcc--ccHHHHHHHHHHHHHHHHHHhhh--
Confidence 45789999999999999999999999999999999999999999999766544 89999999999999999999999
Q ss_pred CCeeecCCCCCceEEc-CCCceEEeecccccccCCCCCCceecccccceeCCcccccCCccc-chhhhhHHHHHHHHHhC
Q 040501 83 PPIVHRDISSKNVLLD-LEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTA-KCDVYSFGVLALEVIKG 160 (228)
Q Consensus 83 ~~i~h~di~p~nil~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~-~~DiwslG~~l~~~~~g 160 (228)
.++||||||+||.+. .-|.+||+|||.+....+. ...++.+|+..|-|||++.|..|+. +.||||||+++|.+++|
T Consensus 138 -HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG-~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCG 215 (864)
T KOG4717|consen 138 -HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG-KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCG 215 (864)
T ss_pred -hhhcccCCcceeEEeeecCceEeeeccccccCCCc-chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhC
Confidence 999999999998664 5599999999999877644 3456678999999999999999874 78999999999999999
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++||+..+ ..+.+..+++-+.... .-.+.+-.+||..||..||++|.|.++|..
T Consensus 216 q~PFqeAN------DSETLTmImDCKYtvP----shvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 216 QPPFQEAN------DSETLTMIMDCKYTVP----SHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred CCcccccc------chhhhhhhhcccccCc----hhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 99987443 2334445555554332 234556679999999999999999999864
No 224
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.3e-38 Score=241.55 Aligned_cols=213 Identities=23% Similarity=0.378 Sum_probs=169.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeee-cCeEEEEEEeecCCChhhhhhcCCCC-----CCCCHHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTH-ARHSFLVYEYLENGSLSVILNNDTSA-----EELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~ 76 (228)
+.+.+|+.++++++|+||+++++++.. +...+++++++.+++|.+++...... ..++..+++.++.|++.||.|
T Consensus 53 ~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~ 132 (280)
T cd05043 53 TLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSY 132 (280)
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence 457889999999999999999998765 56789999999999999998654322 458899999999999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLA 154 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l 154 (228)
||+. +++|+||+|+||+++.++.++++|||+++........ .....++..|+|||.+.+..++.++||||||+++
T Consensus 133 LH~~---~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l 209 (280)
T cd05043 133 LHKR---GVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLL 209 (280)
T ss_pred HHHC---CEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHH
Confidence 9999 9999999999999999999999999998755322211 1122345679999999888899999999999999
Q ss_pred HHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 155 LEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 155 ~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|++++ |..||..... ............... ...++.++.+++.+||..+|++|||+.++++.|+
T Consensus 210 ~el~~~g~~p~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 274 (280)
T cd05043 210 WELMTLGQTPYVEIDP------FEMAAYLKDGYRLAQ---PINCPDELFAVMACCWALDPEERPSFSQLVQCLT 274 (280)
T ss_pred HHHhcCCCCCcCcCCH------HHHHHHHHcCCCCCC---CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 99998 9999754322 122222212211111 1234567899999999999999999999999886
No 225
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.8e-39 Score=246.29 Aligned_cols=211 Identities=21% Similarity=0.316 Sum_probs=163.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++++.+....++++||+.+ +|.+++.... ..+++..++.++.|+++||.|||+.
T Consensus 44 ~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~-- 118 (284)
T cd07839 44 SSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSH-- 118 (284)
T ss_pred cchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 3567899999999999999999999999999999999975 6777665432 2389999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCC-cccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++|+|||++..............++..|+|||.+.+.. ++.++||||||+++|+|++|.
T Consensus 119 -~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~ 197 (284)
T cd07839 119 -NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 197 (284)
T ss_pred -CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999876554333333445678899999887654 688999999999999999998
Q ss_pred CCccccccccCCCchhhhhhh------------------cC-CCCCCC------chhhhhhHHHHHHHHHHhhccCCCCC
Q 040501 162 HPRDFLSNVSSSNPNILVNEM------------------LD-PRLPPL------SVDIRGKVISIMEVAFLCLDNNPESR 216 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~------------------~~-~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~R 216 (228)
.|+...... ......+ .. ...+.. .......+.++.++|.+||+.||.+|
T Consensus 198 ~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 272 (284)
T cd07839 198 RPLFPGNDV-----DDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQR 272 (284)
T ss_pred CCCcCCCCH-----HHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhc
Confidence 885321110 0000000 00 000000 01112356678899999999999999
Q ss_pred CCHHHHHH
Q 040501 217 PNMQTICQ 224 (228)
Q Consensus 217 pt~~~il~ 224 (228)
||++++++
T Consensus 273 ~t~~~il~ 280 (284)
T cd07839 273 ISAEEALQ 280 (284)
T ss_pred CCHHHHhc
Confidence 99999975
No 226
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=8.5e-39 Score=248.42 Aligned_cols=201 Identities=21% Similarity=0.308 Sum_probs=163.8
Q ss_pred HHHHHHHHHHhccC-CCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+..|..++..+. |++|+++.+++......|+||||+.+++|.+++.... .+++.++..++.|++.||.|||+.
T Consensus 45 ~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~- 120 (323)
T cd05615 45 ECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRR- 120 (323)
T ss_pred HHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 34677888888885 6888899999999999999999999999999887543 388999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||++.+..++.++|+||+|+++|+|++|.
T Consensus 121 --~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~ 198 (323)
T cd05615 121 --GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 198 (323)
T ss_pred --CeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCC
Confidence 999999999999999999999999999875433333334456889999999998888999999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM 219 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 219 (228)
.||.... .......+....... ....+.++.+++.+||+.+|.+|++.
T Consensus 199 ~pf~~~~------~~~~~~~i~~~~~~~----p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 199 PPFDGED------EDELFQSIMEHNVSY----PKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CCCCCCC------HHHHHHHHHhCCCCC----CccCCHHHHHHHHHHcccCHhhCCCC
Confidence 9986432 222333333322211 12345578899999999999999985
No 227
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.9e-38 Score=242.46 Aligned_cols=218 Identities=27% Similarity=0.429 Sum_probs=165.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeee--cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTH--ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
+.+.+|++++++++|+||+++++++.. ....++|+||+++++|.+++..... .+++..++.++.|++.||.|||+.
T Consensus 50 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~aL~~LH~~ 127 (284)
T cd05081 50 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRE--RLDHRKLLLYASQICKGMEYLGSK 127 (284)
T ss_pred HHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 467899999999999999999998743 3568999999999999999865432 378899999999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc---eecccccceeCCcccccCCcccchhhhhHHHHHHHH
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW---TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~ 157 (228)
|++|+||||+||+++.++.++|+|||++.......... ....++..|+|||.+.+..++.++|+||||+++|+|
T Consensus 128 ---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 204 (284)
T cd05081 128 ---RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 204 (284)
T ss_pred ---CceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988664332211 111234469999999888899999999999999999
Q ss_pred HhCCCCcccccccc-----CCCc----hhhhhhhcC-CCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 158 IKGKHPRDFLSNVS-----SSNP----NILVNEMLD-PRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 158 ~~g~~p~~~~~~~~-----~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
++|..++....... .... ......... ....+ .....+.++.+++.+||..+|.+|||+.++++.|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05081 205 FTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLP---APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVE 281 (284)
T ss_pred hhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 99877653221100 0000 000001111 11111 11234567999999999999999999999999986
Q ss_pred C
Q 040501 228 K 228 (228)
Q Consensus 228 ~ 228 (228)
.
T Consensus 282 ~ 282 (284)
T cd05081 282 A 282 (284)
T ss_pred h
Confidence 3
No 228
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-38 Score=244.21 Aligned_cols=211 Identities=23% Similarity=0.385 Sum_probs=168.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-CC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH-DC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~ 81 (228)
+.+.+|++++++++|+||+++++.+......|+++||+++++|..++........+++..+..++.|++.|+.|||+ .
T Consensus 44 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~- 122 (286)
T cd06622 44 NQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH- 122 (286)
T ss_pred HHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC-
Confidence 46889999999999999999999999999999999999999999988764333458999999999999999999996 5
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCC------cccchhhhhHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMK------VTAKCDVYSFGVLAL 155 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~------~~~~~DiwslG~~l~ 155 (228)
|++|+||+|+||+++.++.++|+|||.+....... .....++..|+|||.+.+.. ++.++|+||+|+++|
T Consensus 123 --~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~ 198 (286)
T cd06622 123 --NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL--AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSIL 198 (286)
T ss_pred --CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc--cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHH
Confidence 99999999999999999999999999887543221 22345677899999885543 478999999999999
Q ss_pred HHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 156 EVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++++|..||...... ........+.....+... ..++.++.++|.+||+.+|.+||++.++++
T Consensus 199 ~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 199 EMALGRYPYPPETYA---NIFAQLSAIVDGDPPTLP---SGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred HHHhCCCCCCCcchh---hHHHHHHHHhhcCCCCCC---cccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 999999998643211 111122222222222221 235667899999999999999999999886
No 229
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-38 Score=256.34 Aligned_cols=216 Identities=20% Similarity=0.263 Sum_probs=163.0
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+.+|++++++++|+||+++++++..+...++++|++. ++|.+++..... .+++.+++.++.|++.||.|||+.
T Consensus 206 ~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~--- 279 (461)
T PHA03211 206 SSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLR--PLGLAQVTAVARQLLSAIDYIHGE--- 279 (461)
T ss_pred CHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 46789999999999999999999999999999999995 577777754332 489999999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
||+||||||+||+++.++.++|+|||++......... .....|+..|+|||++.+..++.++|||||||++|+|++|.
T Consensus 280 gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~ 359 (461)
T PHA03211 280 GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHT 359 (461)
T ss_pred CEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999998765332211 22356899999999999988999999999999999999887
Q ss_pred CCccccccccC-CCchhhhhhhcCC------CCCC----------------------Cchhh---hhhHHHHHHHHHHhh
Q 040501 162 HPRDFLSNVSS-SNPNILVNEMLDP------RLPP----------------------LSVDI---RGKVISIMEVAFLCL 209 (228)
Q Consensus 162 ~p~~~~~~~~~-~~~~~~~~~~~~~------~~~~----------------------~~~~~---~~~~~~~~~li~~~l 209 (228)
.++........ ......+.+++.. ..+. ....+ ......+.+||.+||
T Consensus 360 ~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL 439 (461)
T PHA03211 360 ASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRAL 439 (461)
T ss_pred CCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHc
Confidence 65422111100 0000011111000 0000 00001 123346889999999
Q ss_pred ccCCCCCCCHHHHHHH
Q 040501 210 DNNPESRPNMQTICQL 225 (228)
Q Consensus 210 ~~~p~~Rpt~~~il~~ 225 (228)
+.||.+|||+.|+++.
T Consensus 440 ~~DP~~RPsa~elL~h 455 (461)
T PHA03211 440 TFDGARRPSAAELLRL 455 (461)
T ss_pred ccChhhCcCHHHHhhC
Confidence 9999999999999873
No 230
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.1e-39 Score=249.39 Aligned_cols=209 Identities=26% Similarity=0.379 Sum_probs=165.1
Q ss_pred HHHHHHHHHHhccC-CCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.|..|+..|.+|+ |.+|+.+++|-..++.+|+|||+- .-+|..+++..... .+.-.+..+..|++.++.++|..
T Consensus 404 ~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G-d~DL~kiL~k~~~~--~~~~~lk~ywkqML~aV~~IH~~- 479 (677)
T KOG0596|consen 404 DGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG-DIDLNKILKKKKSI--DPDWFLKFYWKQMLLAVKTIHQH- 479 (677)
T ss_pred HHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc-cccHHHHHHhccCC--CchHHHHHHHHHHHHHHHHHHHh-
Confidence 45789999999995 999999999998899999999955 56899999865433 33237788999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCC-----------cccchhhh
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMK-----------VTAKCDVY 148 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~-----------~~~~~Diw 148 (228)
||||.||||.|+++- .|.+||+|||++..+..+... .....||+.||+||.+.... .+.+||||
T Consensus 480 --gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvW 556 (677)
T KOG0596|consen 480 --GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVW 556 (677)
T ss_pred --ceeecCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchh
Confidence 999999999999886 479999999999988766554 45678999999999886442 45789999
Q ss_pred hHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 149 SFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 149 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||||++|+|+.|++||+.... ....+..+.++...-.... ..-..++.++++.||..||++|||+.++|+
T Consensus 557 SLGCILYqMvYgktPf~~~~n-----~~aKl~aI~~P~~~Iefp~-~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 557 SLGCILYQMVYGKTPFGQIIN-----QIAKLHAITDPNHEIEFPD-IPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred hhhhHHHHHHhcCCchHHHHH-----HHHHHHhhcCCCccccccC-CCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 999999999999999974432 2223344444432111111 111223889999999999999999999985
No 231
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3e-39 Score=254.56 Aligned_cols=208 Identities=21% Similarity=0.272 Sum_probs=162.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.++..++|++|+++++.+......|+||||+++++|.+++.... .++...+..++.|++.||.|||+.
T Consensus 46 ~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~-- 120 (360)
T cd05627 46 AHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQL-- 120 (360)
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 456789999999999999999999999999999999999999999987543 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCC-----------------------------------Cceecccc
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS-----------------------------------NWTEFAGT 127 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~-----------------------------------~~~~~~~~ 127 (228)
|++||||||+||+++.+|.++|+|||++........ ......|+
T Consensus 121 -givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 199 (360)
T cd05627 121 -GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGT 199 (360)
T ss_pred -CeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCC
Confidence 999999999999999999999999998865422100 01124688
Q ss_pred cceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHH
Q 040501 128 YGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFL 207 (228)
Q Consensus 128 ~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 207 (228)
+.|+|||++.+..++.++|+|||||++|+|++|..||..... ......+...............+.+..++|.+
T Consensus 200 ~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~------~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~ 273 (360)
T cd05627 200 PDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP------QETYRKVMNWKETLVFPPEVPISEKAKDLILR 273 (360)
T ss_pred ccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCH------HHHHHHHHcCCCceecCCCCCCCHHHHHHHHH
Confidence 999999999998999999999999999999999999864322 22222222211100000111245567889988
Q ss_pred hhccCCCCCCC---HHHHH
Q 040501 208 CLDNNPESRPN---MQTIC 223 (228)
Q Consensus 208 ~l~~~p~~Rpt---~~~il 223 (228)
|+ .||.+|++ +.+++
T Consensus 274 l~-~~p~~R~~~~~~~ei~ 291 (360)
T cd05627 274 FC-TDSENRIGSNGVEEIK 291 (360)
T ss_pred hc-cChhhcCCCCCHHHHh
Confidence 77 49999986 45554
No 232
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.7e-38 Score=239.66 Aligned_cols=216 Identities=23% Similarity=0.336 Sum_probs=163.7
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-AEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
.+.+.+|+.+++.++||||+++++.+......|++|||+.+++|.+++..... ....+...+..++.|++.||+|||+.
T Consensus 39 ~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~ 118 (268)
T cd05086 39 QNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH 118 (268)
T ss_pred HHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 35788999999999999999999999999999999999999999999875432 23366777889999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCC--CCceecccccceeCCccccc-------CCcccchhhhhHH
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEFAGTYGYVAPELAYT-------MKVTAKCDVYSFG 151 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-------~~~~~~~DiwslG 151 (228)
+++|+||||+||+++.++.++|+|||++....... .......++..|+|||++.. ..++.++||||||
T Consensus 119 ---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG 195 (268)
T cd05086 119 ---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALG 195 (268)
T ss_pred ---CeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHH
Confidence 99999999999999999999999999875432111 11223456788999998743 2356789999999
Q ss_pred HHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCC--CchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 152 VLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPP--LSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 152 ~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
+++|+|++ |..||..... .............. .+.....+...+.+++..|| .+|.+|||++++++.|.
T Consensus 196 ~~l~el~~~~~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 196 VTLWELFENAAQPYSHLSD------REVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHHHhCCCCCCCCCCH------HHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 99999996 5667643221 11222211111100 01111235567889999999 67999999999999885
No 233
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.2e-38 Score=241.10 Aligned_cols=207 Identities=25% Similarity=0.385 Sum_probs=168.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++++.+....++++||+++++|.+++.+.. .++...+..++.|++.++++||+.
T Consensus 47 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~-- 121 (265)
T cd06631 47 EKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNN-- 121 (265)
T ss_pred HHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 457889999999999999999999999999999999999999999987643 278899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCC------CCceecccccceeCCcccccCCcccchhhhhHHHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS------SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 156 (228)
+++|+||+|+||+++.++.++|+|||.+....... .......++..|+|||.+.+..++.++|+||||+++|+
T Consensus 122 -~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~ 200 (265)
T cd06631 122 -CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFE 200 (265)
T ss_pred -CcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHH
Confidence 99999999999999999999999999887643211 11223457888999999988888999999999999999
Q ss_pred HHhCCCCccccccccCCCchhhhhhhcCC--CCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 157 VIKGKHPRDFLSNVSSSNPNILVNEMLDP--RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+++|..||....... ........ ..+.. ...++.++.++|.+||..+|.+|||+.++++
T Consensus 201 l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 201 MATGKPPLASMDRLA------AMFYIGAHRGLMPRL---PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred HHhCCCccccCChHH------HHHHhhhccCCCCCC---CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 999999986432211 11111111 11111 1245667899999999999999999999875
No 234
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.6e-38 Score=242.88 Aligned_cols=214 Identities=27% Similarity=0.437 Sum_probs=170.4
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-C
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH-D 80 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~ 80 (228)
++.+.+|+++++.++|+||+++++++......++|+||+++++|.+++.... .++...+..++.+++.++.|||+ .
T Consensus 47 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~ 123 (284)
T cd06620 47 RKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYNVH 123 (284)
T ss_pred HHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 3578899999999999999999999999999999999999999999887543 37899999999999999999997 5
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhC
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g 160 (228)
+++|+||+|+||+++.++.++|+|||++....... .....++..|+|||++.+..++.++|+||+||++|++++|
T Consensus 124 ---~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg 198 (284)
T cd06620 124 ---RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALG 198 (284)
T ss_pred ---CeeccCCCHHHEEECCCCcEEEccCCcccchhhhc--cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhC
Confidence 89999999999999999999999999876543221 1234678899999998888889999999999999999999
Q ss_pred CCCccccccccC-----CCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 161 KHPRDFLSNVSS-----SNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 161 ~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
..||........ ...............+... ...++..+.+++.+||+.||.+|||+.++++.
T Consensus 199 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 199 KFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLP--SSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred CCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCC--chhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 999874332100 0001122222222221111 11355678999999999999999999999864
No 235
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1e-38 Score=268.45 Aligned_cols=216 Identities=25% Similarity=0.381 Sum_probs=167.3
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCC--------CCCCCCHHHHHHHHHHHHHH
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT--------SAEELGWSRRINVIKGIAHA 73 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~ 73 (228)
++++.+|++++++++||||+++++++..++..|++|||++|++|.+++.... .....+...++.++.|++.|
T Consensus 46 ~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~A 125 (932)
T PRK13184 46 KKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICAT 125 (932)
T ss_pred HHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHH
Confidence 3578899999999999999999999999999999999999999999886421 11235567788999999999
Q ss_pred HHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCC------------------CceecccccceeCCcc
Q 040501 74 LSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS------------------NWTEFAGTYGYVAPEL 135 (228)
Q Consensus 74 l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~------------------~~~~~~~~~~y~aPE~ 135 (228)
|+|||+. |++||||||+||+++.++.++|+|||++........ ......|++.|+|||.
T Consensus 126 L~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~ 202 (932)
T PRK13184 126 IEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPER 202 (932)
T ss_pred HHHHHHC---CccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHH
Confidence 9999999 999999999999999999999999999876521110 0112458999999999
Q ss_pred cccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCC
Q 040501 136 AYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPES 215 (228)
Q Consensus 136 ~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 215 (228)
+.+..++.++|||||||++|+|++|..||........ ........+ .........+..+.+++.+||+.||++
T Consensus 203 l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki----~~~~~i~~P---~~~~p~~~iP~~L~~LI~rcL~~DP~k 275 (932)
T PRK13184 203 LLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI----SYRDVILSP---IEVAPYREIPPFLSQIAMKALAVDPAE 275 (932)
T ss_pred hcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh----hhhhhccCh---hhccccccCCHHHHHHHHHHccCChhh
Confidence 9998899999999999999999999999864221110 000111111 011112355677899999999999999
Q ss_pred CCC-HHHHHHHhh
Q 040501 216 RPN-MQTICQLLC 227 (228)
Q Consensus 216 Rpt-~~~il~~l~ 227 (228)
||+ ++++++.|+
T Consensus 276 R~ss~eeLl~~Le 288 (932)
T PRK13184 276 RYSSVQELKQDLE 288 (932)
T ss_pred CcCHHHHHHHHHH
Confidence 965 555655553
No 236
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.7e-39 Score=252.01 Aligned_cols=205 Identities=24% Similarity=0.261 Sum_probs=161.3
Q ss_pred HHHHHHHHhcc---CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 5 FLREITVLTEI---RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 5 ~~~E~~~l~~l---~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+..|..++... .||+|+++++.+......|+||||+.+++|.+++.... .+++..+..++.|++.||+|||+.
T Consensus 40 ~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH~~- 115 (330)
T cd05586 40 TIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEG---RFSEDRAKFYIAELVLALEHLHKY- 115 (330)
T ss_pred HHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 34566666655 69999999999999999999999999999998887543 388999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHhC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~g 160 (228)
|++||||||+||+++.++.++|+|||++..............|++.|+|||.+.+. .++.++|||||||++|+|++|
T Consensus 116 --~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG 193 (330)
T cd05586 116 --DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCG 193 (330)
T ss_pred --CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccC
Confidence 99999999999999999999999999987543333333445689999999988754 478899999999999999999
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCC----HHHHHH
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPN----MQTICQ 224 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~ 224 (228)
..||.... .......+........ ....+.++.+++++||+.||.+||+ +.++++
T Consensus 194 ~~Pf~~~~------~~~~~~~i~~~~~~~~---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 194 WSPFYAED------TQQMYRNIAFGKVRFP---KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CCCCCCCC------HHHHHHHHHcCCCCCC---CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 99985321 2222233322222111 1124557889999999999999984 555553
No 237
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=3.2e-38 Score=240.64 Aligned_cols=210 Identities=23% Similarity=0.388 Sum_probs=166.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++|+||+++++++... ..+++++++++++|.+++..+.. .++..+++.++.|++.||+|||+.
T Consensus 54 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l~~~~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~-- 128 (279)
T cd05109 54 KEILDEAYVMAGVGSPYVCRLLGICLTS-TVQLVTQLMPYGCLLDYVRENKD--RIGSQDLLNWCVQIAKGMSYLEEV-- 128 (279)
T ss_pred HHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEEEEEcCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 4678899999999999999999998754 56789999999999999875432 388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc--eecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW--TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
|++|+||||+||+++.++.++|+|||++.......... ....++..|+|||...+..++.++||||||+++|++++
T Consensus 129 -~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~ 207 (279)
T cd05109 129 -RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTF 207 (279)
T ss_pred -CeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999988664332211 11234567999999988889999999999999999998
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|..||..... ......+........ ...++..+.+++.+||+.||.+|||+.++++.|+
T Consensus 208 g~~p~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~ 266 (279)
T cd05109 208 GAKPYDGIPA------REIPDLLEKGERLPQ---PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFS 266 (279)
T ss_pred CCCCCCCCCH------HHHHHHHHCCCcCCC---CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 8999753221 111111111111111 1235567899999999999999999999998875
No 238
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.9e-38 Score=241.63 Aligned_cols=211 Identities=26% Similarity=0.456 Sum_probs=172.7
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+.+|++.++.++|+|++++++.+......|+++||+.+++|.+++.... ..++...++.++.|++.+|.+||+.
T Consensus 59 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~- 135 (286)
T cd06614 59 KELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ- 135 (286)
T ss_pred HHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 4578899999999999999999999999999999999999999999998654 2489999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++|+|||.+..............++..|++||.+.+..++.++|+||||+++|++++|.
T Consensus 136 --gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~ 213 (286)
T cd06614 136 --NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGE 213 (286)
T ss_pred --CeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCC
Confidence 999999999999999999999999998876544333333445678899999998888899999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.||..... ............+... .....+..+.++|.+||+.+|.+|||+.++++
T Consensus 214 ~p~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 214 PPYLREPP------LRALFLITTKGIPPLK-NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred CCCCCCCH------HHHHHHHHhcCCCCCc-chhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 99753221 1111222122221111 12235667999999999999999999999985
No 239
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.3e-38 Score=239.22 Aligned_cols=208 Identities=26% Similarity=0.372 Sum_probs=170.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+||+++++.+.++...|+++||+.+++|.+++.... .++...+..++.|+++||.+||+.
T Consensus 38 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~-- 112 (262)
T cd05572 38 EHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRG---LFDEYTARFYIACVVLAFEYLHNR-- 112 (262)
T ss_pred HHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhC--
Confidence 568899999999999999999999999999999999999999999987643 278899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++|+|||.+....... ......+++.|++||.+.+..++.++|+||+|+++|++++|..
T Consensus 113 -~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~ 190 (262)
T cd05572 113 -GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRP 190 (262)
T ss_pred -CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCC
Confidence 99999999999999999999999999988765432 2223467788999999888888999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCC-CCCCchhhhhhHHHHHHHHHHhhccCCCCCCC-----HHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPR-LPPLSVDIRGKVISIMEVAFLCLDNNPESRPN-----MQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----~~~il~ 224 (228)
||..... +.......+.... ....+ ...+.++.++|.+||..+|.+||+ ++++++
T Consensus 191 p~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 191 PFGEDDE----DPMEIYNDILKGNGKLEFP---NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CcCCCCC----CHHHHHHHHhccCCCCCCC---cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 9864331 1222333333211 11111 122567899999999999999999 888775
No 240
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3e-38 Score=239.84 Aligned_cols=211 Identities=26% Similarity=0.406 Sum_probs=165.4
Q ss_pred hHHHHHHHHHHhcc-CCCccceeeeeeeec------CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHH
Q 040501 2 KKEFLREITVLTEI-RHRNIVKFYGFCTHA------RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHAL 74 (228)
Q Consensus 2 ~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 74 (228)
...+..|+.+++++ +|+||+++++++... ...|+++||+++++|.+++..... ..+++..+..++.|++.|+
T Consensus 46 ~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l 124 (272)
T cd06637 46 EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGL 124 (272)
T ss_pred HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHH
Confidence 34678999999999 799999999998642 468999999999999999875332 2378899999999999999
Q ss_pred HHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-----CCcccchhhhh
Q 040501 75 SYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-----MKVTAKCDVYS 149 (228)
Q Consensus 75 ~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Diws 149 (228)
+|||+. +++|+||+|+||+++.++.++|+|||++..............++..|+|||++.+ ..++.++|+||
T Consensus 125 ~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~s 201 (272)
T cd06637 125 SHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWS 201 (272)
T ss_pred HHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHH
Confidence 999999 9999999999999999999999999998765433333344567889999998763 35778999999
Q ss_pred HHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 150 FGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 150 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+|+++|+|++|..||...... ............. ......+..+.+++.+||..+|.+|||+.++++
T Consensus 202 lGv~l~el~~g~~p~~~~~~~------~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 202 LGITAIEMAEGAPPLCDMHPM------RALFLIPRNPAPR--LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HHHHHHHHHhCCCCccccCHH------HHHHHHhcCCCCC--CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 999999999999998532211 1111111111111 111234567899999999999999999999875
No 241
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2e-38 Score=240.95 Aligned_cols=212 Identities=26% Similarity=0.403 Sum_probs=167.8
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecC------eEEEEEEeecCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDT-SAEELGWSRRINVIKGIAHAL 74 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l 74 (228)
+.+.+|+.+++++ .|+||+++++++.... ..|++|||+.+++|.+++.... ....++...+..++.|++.||
T Consensus 47 ~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al 126 (275)
T cd06608 47 EEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGL 126 (275)
T ss_pred HHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence 5688999999999 7999999999996543 5899999999999999886532 223488999999999999999
Q ss_pred HHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-----Ccccchhhhh
Q 040501 75 SYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-----KVTAKCDVYS 149 (228)
Q Consensus 75 ~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~Diws 149 (228)
.|||+. |++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+... .++.++||||
T Consensus 127 ~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~s 203 (275)
T cd06608 127 AYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWS 203 (275)
T ss_pred HHHhcC---CcccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHH
Confidence 999999 99999999999999999999999999987655443334445678899999987542 3677899999
Q ss_pred HHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 150 FGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 150 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||+++|++++|..||..... ......+.....+... .....+..+.+++.+||..||.+|||+.++++
T Consensus 204 lG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 204 LGITAIELADGKPPLCDMHP------MRALFKIPRNPPPTLK-SPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hHHHHHHHHhCCCCccccch------HHHHHHhhccCCCCCC-chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 99999999999999853211 1222222222222111 12235667899999999999999999999975
No 242
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.3e-38 Score=239.36 Aligned_cols=211 Identities=25% Similarity=0.422 Sum_probs=172.0
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeee--cCeEEEEEEeecCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhh
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTH--ARHSFLVYEYLENGSLSVILNND-TSAEELGWSRRINVIKGIAHALSYLH 78 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lh 78 (228)
++.+..|+++++.++|+||+++++++.. +...|+++||+++++|.+++... .....+++..++.++.|++.||.+||
T Consensus 43 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH 122 (265)
T cd08217 43 KQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH 122 (265)
T ss_pred HHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 3567889999999999999999998753 45789999999999999998753 22344889999999999999999999
Q ss_pred -----hCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHH
Q 040501 79 -----HDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVL 153 (228)
Q Consensus 79 -----~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~ 153 (228)
+. +++|+||+|+||+++.++.++++|||.+..............+++.|+|||.+.+..++.++|+||||++
T Consensus 123 ~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~i 199 (265)
T cd08217 123 NRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCL 199 (265)
T ss_pred cCccccC---cceecCCCHHHEEEecCCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHH
Confidence 77 9999999999999999999999999999876544432344567889999999988888999999999999
Q ss_pred HHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 154 ALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 154 l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+|+|++|..||.... .......+.....+... ...+..+.+++.+||+.+|.+|||+.++++
T Consensus 200 l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 200 IYELCALSPPFTARN------QLQLASKIKEGKFRRIP---YRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred HHHHHHCCCcccCcC------HHHHHHHHhcCCCCCCc---cccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 999999999986432 22233333333332222 245567899999999999999999999986
No 243
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.1e-38 Score=241.59 Aligned_cols=216 Identities=26% Similarity=0.388 Sum_probs=168.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeee--cCeEEEEEEeecCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTH--ARHSFLVYEYLENGSLSVILNND-TSAEELGWSRRINVIKGIAHALSYLHH 79 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lh~ 79 (228)
..+.+|++++++++|+||++++++|.. ...+|+||||+++++|.+++... .....++...+..++.|++.+|+|||+
T Consensus 44 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~ 123 (287)
T cd06621 44 KQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS 123 (287)
T ss_pred HHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 468899999999999999999998854 34789999999999998886542 123347888999999999999999999
Q ss_pred CCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 80 DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 80 ~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
. |++|+||+|+||+++.++.++|+|||++........ ....++..|+|||.+.+..++.++|+||||+++|+|++
T Consensus 124 ~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~ 198 (287)
T cd06621 124 R---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA--GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQ 198 (287)
T ss_pred C---CcccCCCCHHHEEEecCCeEEEeecccccccccccc--ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHh
Confidence 9 999999999999999999999999999875442221 22456778999999988889999999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCC---chhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPL---SVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|..||...... ................+.. .......+..+.+++.+||..+|.+|||+.++++
T Consensus 199 g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 199 NRFPFPPEGEP-PLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCCCCCcccCC-CCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 99998754321 1112222222222121111 1111234567899999999999999999999986
No 244
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.2e-38 Score=237.95 Aligned_cols=212 Identities=27% Similarity=0.437 Sum_probs=175.4
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-C
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH-D 80 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~ 80 (228)
.+.+.+|++.+++++|+|++++++++......++++||+++++|.+++... ..++...++.++.|++.++.+||+ .
T Consensus 43 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ 119 (264)
T cd06623 43 RKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKR 119 (264)
T ss_pred HHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccC
Confidence 357889999999999999999999999999999999999999999999765 338899999999999999999999 9
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhC
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g 160 (228)
|++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+.+..++.++|+||||+++|++++|
T Consensus 120 ---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg 196 (264)
T cd06623 120 ---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALG 196 (264)
T ss_pred ---CCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhC
Confidence 99999999999999999999999999988765444433345678899999999888889999999999999999999
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
..||..... .........+.....+.... ..++..+.++|.+||..+|.+|||+.++++
T Consensus 197 ~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 197 KFPFLPPGQ---PSFFELMQAICDGPPPSLPA--EEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred CCCCccccc---cCHHHHHHHHhcCCCCCCCc--ccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 999865432 11222233333222222211 115678999999999999999999999986
No 245
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.5e-38 Score=244.15 Aligned_cols=212 Identities=22% Similarity=0.267 Sum_probs=167.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+||+++++.+..+...+++||++.+++|.+++.... .+++..+..++.|++.|+.|||+.
T Consensus 46 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~-- 120 (305)
T cd05609 46 QQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNY-- 120 (305)
T ss_pred HHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 457789999999999999999999999999999999999999999997543 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCC---------------CceecccccceeCCcccccCCcccchhh
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS---------------NWTEFAGTYGYVAPELAYTMKVTAKCDV 147 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~---------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di 147 (228)
|++|+||+|+||+++.++.++++|||.+........ ......++..|+|||.+.+..++.++|+
T Consensus 121 -~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 199 (305)
T cd05609 121 -GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDW 199 (305)
T ss_pred -CccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhH
Confidence 999999999999999999999999998763211100 0112346778999999988889999999
Q ss_pred hhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 148 YSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 148 wslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
||||+++|++++|..||... .................. .....+..+.++|.+||+.+|.+||+..++.+.|+
T Consensus 200 ~slG~vl~el~~g~~pf~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 200 WAMGIILYEFLVGCVPFFGD------TPEELFGQVISDDIEWPE-GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred HHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHhcccCCCC-ccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 99999999999999998532 122233333222211111 11245667899999999999999999766666654
No 246
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2e-38 Score=242.37 Aligned_cols=210 Identities=21% Similarity=0.256 Sum_probs=166.6
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+.+|++++++++|++|+++.+.+..++..++++||+.+++|.+++..... ..+++..+..++.|++.||.|||+.
T Consensus 46 ~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~--- 121 (285)
T cd05632 46 MALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHRE--- 121 (285)
T ss_pred HHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 467899999999999999999999999999999999999999988865332 2489999999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p 163 (228)
|++|+||+|+||+++.++.++|+|||.+....... ......++..|+|||.+.+..++.++|+||+|+++|++++|..|
T Consensus 122 ~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P 200 (285)
T cd05632 122 NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSP 200 (285)
T ss_pred CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC-cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999886643222 22334678999999999888899999999999999999999999
Q ss_pred ccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCC-----HHHHHH
Q 040501 164 RDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPN-----MQTICQ 224 (228)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-----~~~il~ 224 (228)
|........ ............ .. .....+..+.+++.+||+.||.+||| +.++++
T Consensus 201 ~~~~~~~~~--~~~~~~~~~~~~-~~---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 201 FRGRKEKVK--REEVDRRVLETE-EV---YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred CCCCCHHHH--HHHHHHhhhccc-cc---cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 864321100 011111111111 11 11234557889999999999999999 566654
No 247
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=6e-38 Score=239.09 Aligned_cols=210 Identities=25% Similarity=0.404 Sum_probs=169.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.+|+.++++++|+||+++++++.. ...++++||+.+++|.+++...... +++..++.++.|++.|++|||+.
T Consensus 54 ~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~LH~~-- 128 (279)
T cd05057 54 KEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDN--IGSQYLLNWCVQIAKGMSYLEEK-- 128 (279)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHhC--
Confidence 467899999999999999999999887 7889999999999999998765432 88999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCce--ecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT--EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
|++|+||+|+||+++.++.++|+|||.+........... ...++..|+|||.+....++.++|+||||+++|++++
T Consensus 129 -~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~ 207 (279)
T cd05057 129 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTF 207 (279)
T ss_pred -CEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcC
Confidence 999999999999999999999999999987653332221 1223467999999888888999999999999999998
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|..||.... .......+......... ...+..+.+++.+||..+|.+|||+.++++.|.
T Consensus 208 g~~p~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~ 266 (279)
T cd05057 208 GAKPYEGIP------AVEIPDLLEKGERLPQP---PICTIDVYMVLVKCWMIDAESRPTFKELINEFS 266 (279)
T ss_pred CCCCCCCCC------HHHHHHHHhCCCCCCCC---CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 999975432 22222222222211111 123446889999999999999999999999886
No 248
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=4.4e-39 Score=254.61 Aligned_cols=215 Identities=22% Similarity=0.308 Sum_probs=162.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecC-----eEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR-----HSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYL 77 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 77 (228)
+++.+|+++++.++|+||+++++++.... ..|+|+||+. ++|.+.+.... .++...+..++.|++.||.||
T Consensus 44 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~---~l~~~~~~~~~~qi~~aL~~L 119 (372)
T cd07853 44 KRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSPQ---PLSSDHVKVFLYQILRGLKYL 119 (372)
T ss_pred HHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999997765 7899999996 46777665432 388999999999999999999
Q ss_pred hhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccC-CcccchhhhhHHHHHH
Q 040501 78 HHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLAL 155 (228)
Q Consensus 78 h~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~ 155 (228)
|+. |++||||||+||+++.++.++|+|||++......... .....+++.|+|||.+.+. .++.++||||+||++|
T Consensus 120 H~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~ 196 (372)
T cd07853 120 HSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFA 196 (372)
T ss_pred HhC---CeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHH
Confidence 999 9999999999999999999999999998765432221 2234567889999998775 4788999999999999
Q ss_pred HHHhCCCCccccccccCCC----------chh-------hhhhhcCC-CCCCCc----hhhhhhHHHHHHHHHHhhccCC
Q 040501 156 EVIKGKHPRDFLSNVSSSN----------PNI-------LVNEMLDP-RLPPLS----VDIRGKVISIMEVAFLCLDNNP 213 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~~~----------~~~-------~~~~~~~~-~~~~~~----~~~~~~~~~~~~li~~~l~~~p 213 (228)
+|++|+.||.......... ... ........ ..++.. ......+.++.++|.+||+.||
T Consensus 197 el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP 276 (372)
T cd07853 197 ELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDP 276 (372)
T ss_pred HHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCCh
Confidence 9999999986433211000 000 00000000 000000 0012235678899999999999
Q ss_pred CCCCCHHHHHH
Q 040501 214 ESRPNMQTICQ 224 (228)
Q Consensus 214 ~~Rpt~~~il~ 224 (228)
.+|||+.++++
T Consensus 277 ~~R~t~~e~l~ 287 (372)
T cd07853 277 DKRISAADALA 287 (372)
T ss_pred hhCcCHHHHhc
Confidence 99999999985
No 249
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.4e-38 Score=255.99 Aligned_cols=216 Identities=22% Similarity=0.275 Sum_probs=157.0
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeec--------CeEEEEEEeecCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHH
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHA--------RHSFLVYEYLENGSLSVILNND-TSAEELGWSRRINVIKGIAHAL 74 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l 74 (228)
...+|+.+++.++|+||+++++++... ..+++||||+++ ++.+++... .....+++..+..++.|++.||
T Consensus 105 ~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL 183 (440)
T PTZ00036 105 YKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRAL 183 (440)
T ss_pred hHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence 346799999999999999998887432 246799999975 666665431 2233488999999999999999
Q ss_pred HHhhhCCCCCeeecCCCCCceEEcCCC-ceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHH
Q 040501 75 SYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGV 152 (228)
Q Consensus 75 ~~lh~~~~~~i~h~di~p~nil~~~~~-~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~ 152 (228)
.|||+. ||+||||||+||+++.++ .+||+|||++....... ......+++.|+|||++.+. .++.++|||||||
T Consensus 184 ~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGv 259 (440)
T PTZ00036 184 AYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ-RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGC 259 (440)
T ss_pred HHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccchhccCCC-CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHH
Confidence 999999 999999999999998664 79999999998654322 22335678899999987664 5899999999999
Q ss_pred HHHHHHhCCCCccccccccCC---------Cchhhhhhh----cCCCCCCCc-hh-----hhhhHHHHHHHHHHhhccCC
Q 040501 153 LALEVIKGKHPRDFLSNVSSS---------NPNILVNEM----LDPRLPPLS-VD-----IRGKVISIMEVAFLCLDNNP 213 (228)
Q Consensus 153 ~l~~~~~g~~p~~~~~~~~~~---------~~~~~~~~~----~~~~~~~~~-~~-----~~~~~~~~~~li~~~l~~~p 213 (228)
++|+|++|.+||......... ......... .....+... .. ....+.++.++|.+||..||
T Consensus 260 il~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP 339 (440)
T PTZ00036 260 IIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEP 339 (440)
T ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCCh
Confidence 999999999998643221100 000000000 000001000 00 01235678999999999999
Q ss_pred CCCCCHHHHHH
Q 040501 214 ESRPNMQTICQ 224 (228)
Q Consensus 214 ~~Rpt~~~il~ 224 (228)
.+|||+.++++
T Consensus 340 ~~R~ta~e~l~ 350 (440)
T PTZ00036 340 LKRLNPIEALA 350 (440)
T ss_pred hHCcCHHHHhC
Confidence 99999999874
No 250
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3e-38 Score=241.13 Aligned_cols=210 Identities=25% Similarity=0.398 Sum_probs=165.2
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeee------cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTH------ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 75 (228)
..+..|+.+++++ +|+||+++++++.. ....|++|||+++++|.+++..... ..+++..+..++.|++.|+.
T Consensus 57 ~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~ 135 (282)
T cd06636 57 EEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG-NALKEDWIAYICREILRGLA 135 (282)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccC-CCCCHHHHHHHHHHHHHHHH
Confidence 4678899999998 69999999999853 4578999999999999999875432 33788889999999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccc-----cCCcccchhhhhH
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAY-----TMKVTAKCDVYSF 150 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Diwsl 150 (228)
|||+. |++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+. +..++.++|+|||
T Consensus 136 ~LH~~---~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~Dvwsl 212 (282)
T cd06636 136 HLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSL 212 (282)
T ss_pred HHHHC---CcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHH
Confidence 99999 999999999999999999999999999876543333334456788999999875 3457789999999
Q ss_pred HHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 151 GVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 151 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|+++|+|++|..||...... ...........+ ......++..+.++|.+||..||.+|||+.++++
T Consensus 213 G~~l~el~~g~~p~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 213 GITAIEMAEGAPPLCDMHPM------RALFLIPRNPPP--KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred HHHHHHHHhCCCCccccCHH------hhhhhHhhCCCC--CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 99999999999998532211 111111111111 1112345678999999999999999999999975
No 251
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-39 Score=255.62 Aligned_cols=213 Identities=26% Similarity=0.425 Sum_probs=178.2
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.|+.|+.+|+.++|||+|+++++|+....+|||.|||..|+|.++++++... .++.-..+.++.||.+|+.||..+
T Consensus 307 veEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~-ev~avvLlyMAtQIsSaMeYLEkk- 384 (1157)
T KOG4278|consen 307 VEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRS-EVPAVVLLYMATQISSAMEYLEKK- 384 (1157)
T ss_pred HHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchh-hcchhHHHHHHHHHHHHHHHHHHh-
Confidence 467999999999999999999999999999999999999999999999987643 377778889999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc-eecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW-TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
+++||||...|++++.+..+|+.|||+++.++.+.... .....+.-|.|||.+..+.++.++|||+||+++||+.+
T Consensus 385 --nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATY 462 (1157)
T KOG4278|consen 385 --NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATY 462 (1157)
T ss_pred --hhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhc
Confidence 99999999999999999999999999999987554332 22334678999999999999999999999999999987
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|..||+...--. .+..+.....- ....+|++.+++|++.||+.+|.+||+++|+-+.|+
T Consensus 463 GMsPYPGidlSq-------VY~LLEkgyRM--~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafE 521 (1157)
T KOG4278|consen 463 GMSPYPGIDLSQ-------VYGLLEKGYRM--DGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFE 521 (1157)
T ss_pred CCCCCCCccHHH-------HHHHHhccccc--cCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence 888987543211 11111111110 012378889999999999999999999999988876
No 252
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.6e-38 Score=249.65 Aligned_cols=215 Identities=24% Similarity=0.397 Sum_probs=169.2
Q ss_pred HHHHHHHHHHhccC-CCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC---------------------------
Q 040501 3 KEFLREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS--------------------------- 54 (228)
Q Consensus 3 ~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--------------------------- 54 (228)
+.+.+|++++.++. |+||+++++.+......++|+||+.+++|.+++.....
T Consensus 85 ~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (401)
T cd05107 85 QALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQR 164 (401)
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhccccccccccccccccccccc
Confidence 46889999999996 99999999999998999999999999999999864321
Q ss_pred --------------------------------------------------------------------CCCCCHHHHHHH
Q 040501 55 --------------------------------------------------------------------AEELGWSRRINV 66 (228)
Q Consensus 55 --------------------------------------------------------------------~~~~~~~~~~~~ 66 (228)
...+++..++.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 244 (401)
T cd05107 165 KSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGF 244 (401)
T ss_pred ccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHH
Confidence 123567778899
Q ss_pred HHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCC--CceecccccceeCCcccccCCcccc
Q 040501 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS--NWTEFAGTYGYVAPELAYTMKVTAK 144 (228)
Q Consensus 67 ~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~ 144 (228)
+.|++.||.|||+. +++|+||||+||+++.++.++|+|||++........ ......++..|+|||.+.+..++.+
T Consensus 245 ~~qi~~aL~~LH~~---~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 321 (401)
T cd05107 245 SYQVANGMEFLASK---NCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTL 321 (401)
T ss_pred HHHHHHHHHHHhcC---CcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcH
Confidence 99999999999999 999999999999999999999999999876432221 1122345778999999988888999
Q ss_pred hhhhhHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 040501 145 CDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223 (228)
Q Consensus 145 ~DiwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il 223 (228)
+|+||||+++|+|++ |..||..... ............... .....+.++.+++.+||..+|.+||++++++
T Consensus 322 ~DvwslGvil~e~l~~g~~P~~~~~~------~~~~~~~~~~~~~~~--~p~~~~~~l~~li~~cl~~~P~~RPs~~ell 393 (401)
T cd05107 322 SDVWSFGILLWEIFTLGGTPYPELPM------NEQFYNAIKRGYRMA--KPAHASDEIYEIMQKCWEEKFEIRPDFSQLV 393 (401)
T ss_pred hHHHHHHHHHHHHHHcCCCCCCCCCc------hHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 999999999999998 8889754321 111111111111000 0123456789999999999999999999999
Q ss_pred HHhhC
Q 040501 224 QLLCK 228 (228)
Q Consensus 224 ~~l~~ 228 (228)
+.|++
T Consensus 394 ~~L~~ 398 (401)
T cd05107 394 HLVGD 398 (401)
T ss_pred HHHHH
Confidence 99874
No 253
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.8e-38 Score=249.72 Aligned_cols=212 Identities=22% Similarity=0.307 Sum_probs=159.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec------CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA------RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (228)
+.+.+|+.+++.++|+||+++++++... ...|++|||+.+ ++...+.. .++...+..++.|++.||.|
T Consensus 61 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~ 134 (355)
T cd07874 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKH 134 (355)
T ss_pred HHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHH
Confidence 4677899999999999999999988543 357999999976 55555532 27788899999999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 156 (228)
||+. |++||||||+||+++.++.++|+|||++...... .......++..|+|||.+.+..++.++|||||||++|+
T Consensus 135 LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~e 210 (355)
T cd07874 135 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 210 (355)
T ss_pred HHhC---CcccCCCChHHEEECCCCCEEEeeCcccccCCCc-cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHH
Confidence 9999 9999999999999999999999999999765432 22233567889999999998889999999999999999
Q ss_pred HHhCCCCccccccccCCC---------ch-------hhhhhhcCC----------------CCCCCchhhhhhHHHHHHH
Q 040501 157 VIKGKHPRDFLSNVSSSN---------PN-------ILVNEMLDP----------------RLPPLSVDIRGKVISIMEV 204 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~~~---------~~-------~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~l 204 (228)
|++|..||.......... .. ......... ..+............+.++
T Consensus 211 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (355)
T cd07874 211 MVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 290 (355)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHH
Confidence 999999986432111000 00 000000000 0000000111234567899
Q ss_pred HHHhhccCCCCCCCHHHHHH
Q 040501 205 AFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 205 i~~~l~~~p~~Rpt~~~il~ 224 (228)
|.+||+.||.+|||+.++++
T Consensus 291 i~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 291 LSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred HHHHhcCCchhcCCHHHHhc
Confidence 99999999999999999986
No 254
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=6.3e-38 Score=237.74 Aligned_cols=213 Identities=26% Similarity=0.463 Sum_probs=171.4
Q ss_pred HHHHHHHHHhc-cCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhh-C
Q 040501 4 EFLREITVLTE-IRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND-TSAEELGWSRRINVIKGIAHALSYLHH-D 80 (228)
Q Consensus 4 ~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lh~-~ 80 (228)
++..|+.++.+ ++|+||+++++++..+...++++||+.+++|.+++... .....++...++.++.|++.++.+||+ .
T Consensus 54 ~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 133 (269)
T cd08528 54 DIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK 133 (269)
T ss_pred HHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 46778888875 69999999999999999999999999999999887542 223348889999999999999999996 5
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhC
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g 160 (228)
+++|+||+|+||+++.++.++|+|||.+....... ......++..|++||.+.+..++.++|+||||+++|++++|
T Consensus 134 ---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g 209 (269)
T cd08528 134 ---RIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTL 209 (269)
T ss_pred ---ceeecCCCHHHEEECCCCcEEEecccceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhC
Confidence 89999999999999999999999999987655433 33345678889999999888889999999999999999999
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
..||.... ..............+.. ....+..+.+++.+||+.||.+|||+.++.+.++.
T Consensus 210 ~~p~~~~~------~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 210 QPPFYSTN------MLSLATKIVEAVYEPLP--EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred CCcccccC------HHHHHHHHhhccCCcCC--cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 99975322 22222222222222211 12345678999999999999999999999998863
No 255
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2e-38 Score=242.31 Aligned_cols=215 Identities=20% Similarity=0.289 Sum_probs=164.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++++......+++|||+. ++|.+++..... ..+++..+..++.|++.|++|||+.
T Consensus 44 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~-- 119 (284)
T cd07860 44 STAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPL-SGIPLPLIKSYLFQLLQGLAFCHSH-- 119 (284)
T ss_pred hHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 468899999999999999999999999999999999996 578888765332 3488999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCC-cccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++++|||.+..............++..|+|||.+.+.. ++.++|+||||+++|++++|.
T Consensus 120 -~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~ 198 (284)
T cd07860 120 -RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 198 (284)
T ss_pred -CeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 999999999999999999999999999876544333333345677899999887654 578899999999999999999
Q ss_pred CCccccccccCCCchhhhhhh---------------------cCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEM---------------------LDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQ 220 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 220 (228)
.||......... ....... ...............+.++.++|.+||+.||.+|||++
T Consensus 199 ~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 276 (284)
T cd07860 199 ALFPGDSEIDQL--FRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAK 276 (284)
T ss_pred CCCCCCCHHHHH--HHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHH
Confidence 998643221100 0000000 00000000001123455678999999999999999999
Q ss_pred HHHH
Q 040501 221 TICQ 224 (228)
Q Consensus 221 ~il~ 224 (228)
++++
T Consensus 277 ~~l~ 280 (284)
T cd07860 277 AALA 280 (284)
T ss_pred HHhc
Confidence 9875
No 256
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=3.1e-38 Score=241.67 Aligned_cols=215 Identities=23% Similarity=0.318 Sum_probs=160.5
Q ss_pred HHHHHHHHHhcc---CCCccceeeeeeee-----cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 040501 4 EFLREITVLTEI---RHRNIVKFYGFCTH-----ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 4 ~~~~E~~~l~~l---~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 75 (228)
.+.+|+.+++.+ +||||+++++++.. ....++++|++.+ +|.+++..... ..++...+..++.|++.||.
T Consensus 45 ~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~ 122 (288)
T cd07863 45 STVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPP-PGLPAETIKDLMRQFLRGLD 122 (288)
T ss_pred HHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHH
Confidence 456788888776 69999999998864 3458999999975 78887765432 34899999999999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHH
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLAL 155 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~ 155 (228)
|||+. |++|+||||+||+++.++.++|+|||.+....... ......++..|+|||++.+..++.++||||+||++|
T Consensus 123 ~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~ 198 (288)
T cd07863 123 FLHAN---CIVHRDLKPENILVTSGGQVKLADFGLARIYSCQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFA 198 (288)
T ss_pred HHHhC---CeecCCCCHHHEEECCCCCEEECccCccccccCcc-cCCCccccccccCchHhhCCCCCCcchhhhHHHHHH
Confidence 99999 99999999999999999999999999987654222 222345788999999998888999999999999999
Q ss_pred HHHhCCCCccccccccCCCc----------hhhhh------hhcCCC-CCCCchhhhhhHHHHHHHHHHhhccCCCCCCC
Q 040501 156 EVIKGKHPRDFLSNVSSSNP----------NILVN------EMLDPR-LPPLSVDIRGKVISIMEVAFLCLDNNPESRPN 218 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~~~~----------~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 218 (228)
+|++|.+||........... ..... ....+. ...........+..+.+++.+||+.||.+|||
T Consensus 199 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 278 (288)
T cd07863 199 EMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRIS 278 (288)
T ss_pred HHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCC
Confidence 99999999853221100000 00000 000000 00011112345567889999999999999999
Q ss_pred HHHHHH
Q 040501 219 MQTICQ 224 (228)
Q Consensus 219 ~~~il~ 224 (228)
+.++++
T Consensus 279 ~~~~l~ 284 (288)
T cd07863 279 AFRALQ 284 (288)
T ss_pred HHHHhc
Confidence 999875
No 257
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.6e-38 Score=243.79 Aligned_cols=210 Identities=23% Similarity=0.277 Sum_probs=168.9
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+||+++++.+......|++|||+.+++|.+++.... ...+++..+..++.|++.+|+|||+.
T Consensus 46 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~-- 122 (316)
T cd05574 46 KRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLL-- 122 (316)
T ss_pred HHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHC--
Confidence 457889999999999999999999999999999999999999999987543 23488999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-----------------------------ceecccccceeCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-----------------------------WTEFAGTYGYVAP 133 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-----------------------------~~~~~~~~~y~aP 133 (228)
|++|+||||+||+++.++.++|+|||++......... .....|+..|+||
T Consensus 123 -~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aP 201 (316)
T cd05574 123 -GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAP 201 (316)
T ss_pred -CeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCH
Confidence 9999999999999999999999999988754322110 1123567789999
Q ss_pred cccccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCC
Q 040501 134 ELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNP 213 (228)
Q Consensus 134 E~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 213 (228)
|++.+..++.++||||||+++|++++|..||..... ......+......... ....+..+.+++.+||..+|
T Consensus 202 E~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p 273 (316)
T cd05574 202 EVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR------DETFSNILKKEVTFPG--SPPVSSSARDLIRKLLVKDP 273 (316)
T ss_pred HHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch------HHHHHHHhcCCccCCC--ccccCHHHHHHHHHHccCCH
Confidence 999888899999999999999999999999853321 2222222222221111 11256789999999999999
Q ss_pred CCCCC----HHHHHH
Q 040501 214 ESRPN----MQTICQ 224 (228)
Q Consensus 214 ~~Rpt----~~~il~ 224 (228)
.+||| ++++++
T Consensus 274 ~~R~s~~~~~~~ll~ 288 (316)
T cd05574 274 SKRLGSKRGAAEIKQ 288 (316)
T ss_pred hHCCCchhhHHHHHc
Confidence 99999 777765
No 258
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.7e-38 Score=242.41 Aligned_cols=213 Identities=21% Similarity=0.316 Sum_probs=161.8
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+.+|++++++++|+||+++++++..+...++|+||+.+ +|.+++..... .++...+..++.|+++||.|||+.
T Consensus 49 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH~~--- 122 (291)
T cd07844 49 TAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCHQR--- 122 (291)
T ss_pred hHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 467899999999999999999999999999999999975 88888765433 478899999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHHHHHHhCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++|+|||++..............++..|+|||.+.+ ..++.++|+||+|+++|+|++|..
T Consensus 123 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~ 202 (291)
T cd07844 123 RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRP 202 (291)
T ss_pred CeecccCCHHHEEEcCCCCEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999998754433222233346788999998865 457889999999999999999999
Q ss_pred CccccccccCCCchhhhhhhc------------------CCCC-----CCCchhhhhh--HHHHHHHHHHhhccCCCCCC
Q 040501 163 PRDFLSNVSSSNPNILVNEML------------------DPRL-----PPLSVDIRGK--VISIMEVAFLCLDNNPESRP 217 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~------------------~~~~-----~~~~~~~~~~--~~~~~~li~~~l~~~p~~Rp 217 (228)
||........ ......+.. .... .......... ...+.+++.+||+.+|.+||
T Consensus 203 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rp 280 (291)
T cd07844 203 LFPGSTDVED--QLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRI 280 (291)
T ss_pred CCCCCccHHH--HHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCccccc
Confidence 9854321000 000000000 0000 0000000111 25678999999999999999
Q ss_pred CHHHHHH
Q 040501 218 NMQTICQ 224 (228)
Q Consensus 218 t~~~il~ 224 (228)
|+.++++
T Consensus 281 s~~e~l~ 287 (291)
T cd07844 281 SAAEAMK 287 (291)
T ss_pred CHHHHhc
Confidence 9999875
No 259
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.1e-38 Score=239.23 Aligned_cols=211 Identities=25% Similarity=0.430 Sum_probs=168.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++++.+....++++||+.+++|.+++.... .+++..++.++.|++.||.+||+.
T Consensus 48 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~-- 122 (268)
T cd06630 48 EALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHEN-- 122 (268)
T ss_pred HHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 568899999999999999999999999999999999999999999987543 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCC-ceEEeecccccccCCCCCC----ceecccccceeCCcccccCCcccchhhhhHHHHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFIQPDSSN----WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~-~~~l~df~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~ 157 (228)
|++|+||+|+||+++.++ .++|+|||.+......... .....++..|+|||.+.+..++.++|+||+|+++|++
T Consensus 123 -~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l 201 (268)
T cd06630 123 -QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEM 201 (268)
T ss_pred -CeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHH
Confidence 999999999999998775 5899999998766543211 1224567889999999888889999999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++|..||...... ............... .......+.++.+++.+||..+|.+|||+.++++
T Consensus 202 ~~g~~p~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 202 ATAKPPWNAEKHS---NHLALIFKIASATTA--PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred HhCCCCCCCCCCc---chHHHHHHHhccCCC--CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 9999998533221 111111111111111 1111245567889999999999999999999985
No 260
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=8.7e-38 Score=242.31 Aligned_cols=159 Identities=23% Similarity=0.397 Sum_probs=130.6
Q ss_pred HHHHHHHHHhccCCCccceeeeeee--ecCeEEEEEEeecCCChhhhhhcC------CCCCCCCHHHHHHHHHHHHHHHH
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCT--HARHSFLVYEYLENGSLSVILNND------TSAEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~~~~~l~~~l~ 75 (228)
.+.+|+++++.++||||+++++++. .+...|+++||+.+ +|.+++... .....+++..+..++.|++.||.
T Consensus 44 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~ 122 (317)
T cd07867 44 SACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIH 122 (317)
T ss_pred HHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999985 35678999999865 666665421 11234788899999999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEE----cCCCceEEeecccccccCCCCCC---ceecccccceeCCcccccC-Ccccchhh
Q 040501 76 YLHHDCIPPIVHRDISSKNVLL----DLEYEAHVSDFGIAKFIQPDSSN---WTEFAGTYGYVAPELAYTM-KVTAKCDV 147 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~----~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Di 147 (228)
|||+. |++|+||||+||++ +.++.++|+|||++......... .....+++.|+|||.+.+. .++.++||
T Consensus 123 ~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 199 (317)
T cd07867 123 YLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDI 199 (317)
T ss_pred HHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHH
Confidence 99999 99999999999999 45678999999999865433221 2334678899999988764 47889999
Q ss_pred hhHHHHHHHHHhCCCCccc
Q 040501 148 YSFGVLALEVIKGKHPRDF 166 (228)
Q Consensus 148 wslG~~l~~~~~g~~p~~~ 166 (228)
||||+++|+|++|.+||..
T Consensus 200 wSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 200 WAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred HhHHHHHHHHHhCCCCccc
Confidence 9999999999999999863
No 261
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.8e-38 Score=239.94 Aligned_cols=211 Identities=24% Similarity=0.254 Sum_probs=167.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++||||+++.+.+...+..|+|+||+++++|.+++..... ..+++..+..++.|++.++.|||+.
T Consensus 38 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~-- 114 (277)
T cd05577 38 QMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQR-- 114 (277)
T ss_pred HHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 3567899999999999999999999999999999999999999999875442 3488999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++|+|||.+..... ........++..|+|||.+.+..++.++|+||+|+++|+|++|..
T Consensus 115 -~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~ 192 (277)
T cd05577 115 -RIVYRDLKPENVLLDDHGNVRISDLGLAVELKG-GKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRS 192 (277)
T ss_pred -CcccCCCCHHHEEECCCCCEEEccCcchhhhcc-CCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCC
Confidence 999999999999999999999999998876543 222233456778999999988888999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP-----NMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~il~ 224 (228)
||....... .......... ..... .....+..+.++|.+||+.||.+|| ++.++++
T Consensus 193 p~~~~~~~~--~~~~~~~~~~-~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 193 PFRQRKEKV--EKEELKRRTL-EMAVE---YPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred CCCCCcccc--cHHHHHhccc-ccccc---CCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 986433211 1111111111 11111 1123466789999999999999999 7776764
No 262
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-40 Score=238.81 Aligned_cols=211 Identities=25% Similarity=0.437 Sum_probs=181.5
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
-+.+..|+.++++++.+++|++++.+.....+|||||||..|+..+.++... +.+++..+..+++..+.||.|||..
T Consensus 72 LQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH~~- 148 (502)
T KOG0574|consen 72 LQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARR--KPLSEQEISAVLRDTLKGLQYLHDL- 148 (502)
T ss_pred HHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhc--CCccHHHHHHHHHHHHhHHHHHHHH-
Confidence 4678899999999999999999999999999999999999999999997544 4499999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
.=+|||||..||+++.+|..||.|||.+...++.-...++..|||.|+|||++..-.|..++||||||+...+|..|+
T Consensus 149 --~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~ 226 (502)
T KOG0574|consen 149 --KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGR 226 (502)
T ss_pred --HHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCC
Confidence 999999999999999999999999999988776666677889999999999999999999999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+||....... .+.-+. ...++.......-+.++.+++++||.++|++|.|+.++++
T Consensus 227 PPYsDIHPMR------AIFMIP-T~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 227 PPYSDIHPMR------AIFMIP-TKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred CCcccccccc------eeEecc-CCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 9986554432 222222 2233333333455677899999999999999999998876
No 263
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=6.2e-38 Score=240.31 Aligned_cols=203 Identities=25% Similarity=0.330 Sum_probs=167.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++++.||||+++++++..+...|++|||+++++|.+++.... .++...+..++.|++.||.+||+.
T Consensus 46 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH~~-- 120 (290)
T cd05580 46 EHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLHSL-- 120 (290)
T ss_pred HHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 457889999999999999999999999999999999999999999987653 388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++|+|||++...... .....+++.|+|||.+.+...+.++|+||||+++|+|++|..
T Consensus 121 -~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~ 196 (290)
T cd05580 121 -DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYP 196 (290)
T ss_pred -CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999998775433 223467889999999888888899999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP-----NMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~il~ 224 (228)
||.... .......+....... + ...+..+.+++.+||..||.+|+ +++++++
T Consensus 197 p~~~~~------~~~~~~~~~~~~~~~-~---~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 197 PFFDDN------PIQIYEKILEGKVRF-P---SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred CCCCCC------HHHHHHHHhcCCccC-C---ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 985332 222222332222211 1 12355788999999999999999 7777763
No 264
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-39 Score=241.50 Aligned_cols=214 Identities=23% Similarity=0.336 Sum_probs=162.6
Q ss_pred HHHHHHHhccCCCccceeeeeeeecC-----eEEEEEEeecCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 040501 6 LREITVLTEIRHRNIVKFYGFCTHAR-----HSFLVYEYLENGSLSVILNND-TSAEELGWSRRINVIKGIAHALSYLHH 79 (228)
Q Consensus 6 ~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lh~ 79 (228)
.+|+++|+.+.|||||++.-+|.... ...+||||++. +|...++.. .....++.-.+.-+.+|++.||+|||+
T Consensus 65 nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~ 143 (364)
T KOG0658|consen 65 NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS 143 (364)
T ss_pred cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh
Confidence 47999999999999999999885432 34589999975 888888742 112336777778899999999999999
Q ss_pred CCCCCeeecCCCCCceEEcCC-CceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHH
Q 040501 80 DCIPPIVHRDISSKNVLLDLE-YEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 80 ~~~~~i~h~di~p~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~ 157 (228)
. ||+||||||.|++++.+ |.+||+|||.++....+... .+...+..|+|||.+.+. .|+.+.||||.||++.||
T Consensus 144 ~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aEL 219 (364)
T KOG0658|consen 144 H---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAEL 219 (364)
T ss_pred c---CcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHH
Confidence 9 99999999999999987 99999999999987655443 556778899999988776 589999999999999999
Q ss_pred HhCCCCccccccccC---------CCchhhhhhhc----C---CCCCC--C-chhhhhhHHHHHHHHHHhhccCCCCCCC
Q 040501 158 IKGKHPRDFLSNVSS---------SNPNILVNEML----D---PRLPP--L-SVDIRGKVISIMEVAFLCLDNNPESRPN 218 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~---------~~~~~~~~~~~----~---~~~~~--~-~~~~~~~~~~~~~li~~~l~~~p~~Rpt 218 (228)
+-|++-|+.....+. ....+.+..+. . +.... . .......+.+..+++.++|..+|.+|.+
T Consensus 220 l~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~ 299 (364)
T KOG0658|consen 220 LKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLS 299 (364)
T ss_pred hcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCC
Confidence 999999875433211 00111111100 0 11100 0 0123455678899999999999999999
Q ss_pred HHHHHH
Q 040501 219 MQTICQ 224 (228)
Q Consensus 219 ~~~il~ 224 (228)
+.+++.
T Consensus 300 ~~~~l~ 305 (364)
T KOG0658|consen 300 ALEALA 305 (364)
T ss_pred HHHHhc
Confidence 998874
No 265
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-39 Score=234.82 Aligned_cols=218 Identities=21% Similarity=0.337 Sum_probs=184.6
Q ss_pred ChHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 040501 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH 79 (228)
Q Consensus 1 ~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 79 (228)
.|+++.+|++++.++ .|+||+.++++|+++..+|+|||.+.||+|...|..+.. +++..+..+..+++.||.+||.
T Consensus 118 sR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~---F~E~EAs~vvkdia~aLdFlH~ 194 (463)
T KOG0607|consen 118 SRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKH---FNEREASRVVKDIASALDFLHT 194 (463)
T ss_pred HHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhh---ccHHHHHHHHHHHHHHHHHHhh
Confidence 378899999999999 499999999999999999999999999999998876544 8999999999999999999999
Q ss_pred CCCCCeeecCCCCCceEEcCCCc---eEEeecccccccCCCCC-------CceecccccceeCCcccc---c--CCcccc
Q 040501 80 DCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKFIQPDSS-------NWTEFAGTYGYVAPELAY---T--MKVTAK 144 (228)
Q Consensus 80 ~~~~~i~h~di~p~nil~~~~~~---~~l~df~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~---~--~~~~~~ 144 (228)
+ ||.|||+||+||+....+. +||+||.+..-+..... ...++.|+..|||||+.. + ..|+.+
T Consensus 195 k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKr 271 (463)
T KOG0607|consen 195 K---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKR 271 (463)
T ss_pred c---CcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhcccccccccc
Confidence 9 9999999999999977654 69999998775533222 134578889999999753 2 347889
Q ss_pred hhhhhHHHHHHHHHhCCCCcccccc---------ccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCC
Q 040501 145 CDVYSFGVLALEVIKGKHPRDFLSN---------VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPES 215 (228)
Q Consensus 145 ~DiwslG~~l~~~~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 215 (228)
.|.||||+++|-|++|++||...-. .-...+...++.+-.+.......+|...+.+..++|+..|..++.+
T Consensus 272 CDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~ 351 (463)
T KOG0607|consen 272 CDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQ 351 (463)
T ss_pred ccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHh
Confidence 9999999999999999999964322 1223345567788888888888889999999999999999999999
Q ss_pred CCCHHHHHH
Q 040501 216 RPNMQTICQ 224 (228)
Q Consensus 216 Rpt~~~il~ 224 (228)
|.++..+++
T Consensus 352 rlsa~~vln 360 (463)
T KOG0607|consen 352 RLSAAQVLN 360 (463)
T ss_pred hhhhhhccC
Confidence 999988765
No 266
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=9.9e-38 Score=237.65 Aligned_cols=207 Identities=26% Similarity=0.467 Sum_probs=168.3
Q ss_pred HHHHHHHHHHhccC---CCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 040501 3 KEFLREITVLTEIR---HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH 79 (228)
Q Consensus 3 ~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 79 (228)
+.+.+|+.++++++ |+|++++++++..+...|++|||+.+++|.+++... .+++..++.++.|++.++.+||+
T Consensus 44 ~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~ 119 (277)
T cd06917 44 SDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHK 119 (277)
T ss_pred HHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHh
Confidence 46788999999996 999999999999999999999999999999988653 38899999999999999999999
Q ss_pred CCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHHH
Q 040501 80 DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVI 158 (228)
Q Consensus 80 ~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~ 158 (228)
. |++|+||+|+||+++.++.++++|||.+..............++..|+|||.+.+. .++.++|+||||+++|+|+
T Consensus 120 ~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll 196 (277)
T cd06917 120 V---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMA 196 (277)
T ss_pred C---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHH
Confidence 9 99999999999999999999999999988765544334445678899999987654 4688999999999999999
Q ss_pred hCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 159 KGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 159 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+|..||....... ..........+... ....+.++.+++.+||+.||.+|||+.++++
T Consensus 197 ~g~~p~~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 197 TGNPPYSDVDAFR------AMMLIPKSKPPRLE--DNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred hCCCCCCCCChhh------hhhccccCCCCCCC--cccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 9999986432211 11111111111111 1125667999999999999999999999875
No 267
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.5e-38 Score=236.94 Aligned_cols=210 Identities=25% Similarity=0.386 Sum_probs=171.4
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+.+|+++++.++|+||+++++.+......++++||+.+++|.+++..... ..+++..+..++.|++.|+.|||+.
T Consensus 43 ~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~- 120 (257)
T cd08225 43 KEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDR- 120 (257)
T ss_pred hHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 35678999999999999999999999999999999999999999999875432 2378899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCC-ceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhC
Q 040501 82 IPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~-~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g 160 (228)
+++|+||+|+||+++.++ .++++|||.+..............+++.|+|||.+.+..++.++|+||+|++++++++|
T Consensus 121 --~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g 198 (257)
T cd08225 121 --KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTL 198 (257)
T ss_pred --CcccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhC
Confidence 999999999999998885 46999999887765433333345678889999998888889999999999999999999
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
..||.... ................. ...+..+.+++.+||..+|.+|||+.++++
T Consensus 199 ~~p~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 199 KHPFEGNN------LHQLVLKICQGYFAPIS---PNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCCCCcc------HHHHHHHHhcccCCCCC---CCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 99975322 22222333333322221 244567899999999999999999999986
No 268
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.3e-38 Score=268.96 Aligned_cols=213 Identities=24% Similarity=0.367 Sum_probs=164.6
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeee--cCeEEEEEEeecCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhh
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTH--ARHSFLVYEYLENGSLSVILNNDT-SAEELGWSRRINVIKGIAHALSYLH 78 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh 78 (228)
.+.|..|+.+++.++||||++++++|.. ...+|+||||+.+++|.+++.... ....+++..++.++.||+.||.|||
T Consensus 56 ~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLH 135 (1021)
T PTZ00266 56 KSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCH 135 (1021)
T ss_pred HHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3568899999999999999999998854 457899999999999999987532 2234899999999999999999999
Q ss_pred hCCC----CCeeecCCCCCceEEcCC-----------------CceEEeecccccccCCCCCCceecccccceeCCcccc
Q 040501 79 HDCI----PPIVHRDISSKNVLLDLE-----------------YEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAY 137 (228)
Q Consensus 79 ~~~~----~~i~h~di~p~nil~~~~-----------------~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 137 (228)
+.+. .+|+|+||||+|||++.+ +.++|+|||++........ .....+++.|+|||++.
T Consensus 136 s~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~-~~s~vGTp~YmAPEvL~ 214 (1021)
T PTZ00266 136 NLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM-AHSCVGTPYYWSPELLL 214 (1021)
T ss_pred hcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccccc-ccccCCCccccCHHHHh
Confidence 8520 159999999999999642 3489999999976543322 23456899999999886
Q ss_pred c--CCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCC
Q 040501 138 T--MKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPES 215 (228)
Q Consensus 138 ~--~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 215 (228)
+ ..++.++|||||||++|+|++|..||..... .......+...... .....+.++.+||.+||..+|.+
T Consensus 215 ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~-----~~qli~~lk~~p~l----pi~~~S~eL~dLI~~~L~~dPee 285 (1021)
T PTZ00266 215 HETKSYDDKSDMWALGCIIYELCSGKTPFHKANN-----FSQLISELKRGPDL----PIKGKSKELNILIKNLLNLSAKE 285 (1021)
T ss_pred ccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc-----HHHHHHHHhcCCCC----CcCCCCHHHHHHHHHHhcCChhH
Confidence 4 3478899999999999999999999863221 11222222111111 11234567899999999999999
Q ss_pred CCCHHHHHH
Q 040501 216 RPNMQTICQ 224 (228)
Q Consensus 216 Rpt~~~il~ 224 (228)
|||+.+++.
T Consensus 286 RPSa~QlL~ 294 (1021)
T PTZ00266 286 RPSALQCLG 294 (1021)
T ss_pred CcCHHHHhc
Confidence 999999984
No 269
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=5e-38 Score=241.69 Aligned_cols=214 Identities=22% Similarity=0.285 Sum_probs=165.6
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+..|++++++++|+||+++++++.+....++||||+ +++|.+++.... ..+++..++.++.|+++||.|||+.
T Consensus 48 ~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~--- 121 (298)
T cd07841 48 TALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN--- 121 (298)
T ss_pred HHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 4678999999999999999999999999999999999 889999987644 2488999999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHHHHHHhCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++|+|||++..............++..|+|||.+.+ ..++.++|+||||+++|+|++|.+
T Consensus 122 ~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~ 201 (298)
T cd07841 122 WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVP 201 (298)
T ss_pred CeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCc
Confidence 9999999999999999999999999999876544333333456778999998855 356889999999999999999988
Q ss_pred CccccccccCCCchhhhhhh------------------cCCC--CCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEM------------------LDPR--LPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~------------------~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i 222 (228)
||........ ........ .... ...........+..+.++|.+||+.+|++|||++++
T Consensus 202 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~ 279 (298)
T cd07841 202 FLPGDSDIDQ--LGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQA 279 (298)
T ss_pred cccCCccHHH--HHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHH
Confidence 7653221110 00000000 0000 000011112345678899999999999999999999
Q ss_pred HHH
Q 040501 223 CQL 225 (228)
Q Consensus 223 l~~ 225 (228)
++.
T Consensus 280 l~~ 282 (298)
T cd07841 280 LEH 282 (298)
T ss_pred hhC
Confidence 863
No 270
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2e-38 Score=248.40 Aligned_cols=211 Identities=23% Similarity=0.386 Sum_probs=159.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec------CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA------RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (228)
+.+.+|++++++++|+||+++++++... ...|++++++ +++|.+++... .++...+..++.|++.||.|
T Consensus 59 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~ 133 (343)
T cd07878 59 RRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKY 133 (343)
T ss_pred HHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHH
Confidence 4577899999999999999999988533 3578999987 67888877532 38899999999999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLAL 155 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~ 155 (228)
||+. |++||||||+||+++.++.+||+|||++...... .....+++.|+|||.+.+ ..++.++|||||||++|
T Consensus 134 LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 207 (343)
T cd07878 134 IHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 207 (343)
T ss_pred HHHC---CeecccCChhhEEECCCCCEEEcCCccceecCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHH
Confidence 9999 9999999999999999999999999998865432 233567889999999876 46788999999999999
Q ss_pred HHHhCCCCccccccccC---------CCchhhhhhh--------cC--CCCCC--CchhhhhhHHHHHHHHHHhhccCCC
Q 040501 156 EVIKGKHPRDFLSNVSS---------SNPNILVNEM--------LD--PRLPP--LSVDIRGKVISIMEVAFLCLDNNPE 214 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~---------~~~~~~~~~~--------~~--~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~ 214 (228)
+|++|..||........ .........+ .. +..+. ......+....+.+++.+||..||.
T Consensus 208 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~ 287 (343)
T cd07878 208 ELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSD 287 (343)
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChh
Confidence 99999999864321100 0000000000 00 00000 0001122344578999999999999
Q ss_pred CCCCHHHHHH
Q 040501 215 SRPNMQTICQ 224 (228)
Q Consensus 215 ~Rpt~~~il~ 224 (228)
+|||+.++++
T Consensus 288 ~R~s~~ell~ 297 (343)
T cd07878 288 KRISASEALA 297 (343)
T ss_pred hCCCHHHHhc
Confidence 9999999985
No 271
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=9.4e-38 Score=235.06 Aligned_cols=209 Identities=24% Similarity=0.395 Sum_probs=169.7
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+.+|++++++++|+|++++++.+......++|+|++++++|.+++.... ...+++..+..++.+++.++++||+.
T Consensus 43 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~- 120 (256)
T cd08220 43 RLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTK- 120 (256)
T ss_pred HHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 3568899999999999999999999999999999999999999999997543 23378899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCC-CceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhC
Q 040501 82 IPPIVHRDISSKNVLLDLE-YEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g 160 (228)
|++|+||+|+||+++.+ +.++++|||.+........ .....++..|+|||.+.+..++.++|+||+|+++|++++|
T Consensus 121 --~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~ 197 (256)
T cd08220 121 --LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK-AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASL 197 (256)
T ss_pred --CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc-ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhC
Confidence 99999999999999865 4579999999887653322 2234577899999999888889999999999999999999
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
..||.... ................. ...+..+.+++.+||..+|.+|||+.+++.
T Consensus 198 ~~~~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 198 KRAFEAAN------LPALVLKIMSGTFAPIS---DRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CCCcccCc------hHHHHHHHHhcCCCCCC---CCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 99975322 22222233222222111 235567899999999999999999999985
No 272
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=5.4e-38 Score=240.72 Aligned_cols=208 Identities=23% Similarity=0.409 Sum_probs=168.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++|+||+++++.+..++..+++|||+++++|.+++... .+++..+..++.|++.++++||+.
T Consensus 62 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~-- 135 (292)
T cd06657 62 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLKALSVLHAQ-- 135 (292)
T ss_pred HHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 46788999999999999999999999999999999999999999887543 278899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+.+..++.++|+||+|+++|++++|..
T Consensus 136 -givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~ 214 (292)
T cd06657 136 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 214 (292)
T ss_pred -CeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999988765433333334567888999999888888999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||...... ...... ....+.........+..+.+++.+||..+|.+||++.++++
T Consensus 215 p~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 215 PYFNEPPL------KAMKMI-RDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred CCCCCCHH------HHHHHH-HhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 97532211 111111 11111111112234557889999999999999999999886
No 273
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=8e-38 Score=242.24 Aligned_cols=213 Identities=21% Similarity=0.298 Sum_probs=165.9
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+||+++++++..+...+++|||+++++|.+++..... ..++...+..++.|++.||+|||+.
T Consensus 44 ~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~-- 120 (314)
T cd08216 44 KLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSK-- 120 (314)
T ss_pred HHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 5788999999999999999999999999999999999999999999875432 2378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-------ceecccccceeCCcccccC--CcccchhhhhHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-------WTEFAGTYGYVAPELAYTM--KVTAKCDVYSFGVL 153 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~ 153 (228)
+++|+||+|+||+++.++.++++||+.+......... .....++..|+|||.+.+. .++.++|+||+|++
T Consensus 121 -~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~i 199 (314)
T cd08216 121 -GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGIT 199 (314)
T ss_pred -CeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHH
Confidence 9999999999999999999999999987654322111 1223456789999988663 47889999999999
Q ss_pred HHHHHhCCCCccccccccCCCchhhhhhhc---------------------------C--CCCCCCchhhhhhHHHHHHH
Q 040501 154 ALEVIKGKHPRDFLSNVSSSNPNILVNEML---------------------------D--PRLPPLSVDIRGKVISIMEV 204 (228)
Q Consensus 154 l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~--~~~~~~~~~~~~~~~~~~~l 204 (228)
+|+|++|..||....... ....... . .............+.++.++
T Consensus 200 l~el~~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 274 (314)
T cd08216 200 ACELANGHVPFKDMPATQ-----MLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQF 274 (314)
T ss_pred HHHHHhCCCCCCCCCHHH-----HHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHH
Confidence 999999999986432110 0000000 0 00000111123445678899
Q ss_pred HHHhhccCCCCCCCHHHHHH
Q 040501 205 AFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 205 i~~~l~~~p~~Rpt~~~il~ 224 (228)
+.+||..||.+|||+.++++
T Consensus 275 i~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 275 VELCLQRDPESRPSASQLLN 294 (314)
T ss_pred HHHHhhcCCCcCcCHHHHhc
Confidence 99999999999999999986
No 274
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.3e-38 Score=247.85 Aligned_cols=212 Identities=22% Similarity=0.317 Sum_probs=159.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec------CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA------RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (228)
+.+.+|+.+++.++|+||+++++++... ...|+||||+.+ +|...+.. .++...+..++.|++.||.|
T Consensus 68 ~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~ 141 (364)
T cd07875 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKH 141 (364)
T ss_pred HHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999999987543 357999999975 66666542 27788899999999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 156 (228)
||+. |++||||||+||+++.++.++|+|||++....... ......++..|+|||++.+..++.++|||||||++|+
T Consensus 142 LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~e 217 (364)
T cd07875 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217 (364)
T ss_pred HhhC---CeecCCCCHHHEEECCCCcEEEEeCCCccccCCCC-cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHH
Confidence 9999 99999999999999999999999999997654322 2233567889999999999889999999999999999
Q ss_pred HHhCCCCccccccccCCCc---------hhh-------hhhhcCCCC----------------CCCchhhhhhHHHHHHH
Q 040501 157 VIKGKHPRDFLSNVSSSNP---------NIL-------VNEMLDPRL----------------PPLSVDIRGKVISIMEV 204 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~~~~---------~~~-------~~~~~~~~~----------------~~~~~~~~~~~~~~~~l 204 (228)
|++|..||........... ... .......+. +............+.++
T Consensus 218 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 297 (364)
T cd07875 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297 (364)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHH
Confidence 9999999864322110000 000 000000000 00000001123467899
Q ss_pred HHHhhccCCCCCCCHHHHHH
Q 040501 205 AFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 205 i~~~l~~~p~~Rpt~~~il~ 224 (228)
|.+||+.||.+|||+.++++
T Consensus 298 l~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 298 LSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HHHhcCcCcccCCCHHHHhc
Confidence 99999999999999999986
No 275
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=6.7e-38 Score=244.18 Aligned_cols=211 Identities=22% Similarity=0.257 Sum_probs=163.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++|+||+++++.+..+...|+||||+.+++|.+++.... ..+++..+..++.|++.||+|||+.
T Consensus 46 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~-- 121 (331)
T cd05597 46 ACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQL-- 121 (331)
T ss_pred HHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 457789999999999999999999999999999999999999999987533 2388899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCccccc-----CCcccchhhhhHHHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYT-----MKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~-----~~~~~~~DiwslG~~l~~ 156 (228)
|++||||||+||+++.++.++|+|||++......... .....|++.|+|||++.. ..++.++||||+||++|+
T Consensus 122 -~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~e 200 (331)
T cd05597 122 -GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYE 200 (331)
T ss_pred -CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHH
Confidence 9999999999999999999999999998765433222 223468899999999863 346789999999999999
Q ss_pred HHhCCCCccccccccCCCchhhhhhhcCCC-CCCCchhhhhhHHHHHHHHHHhhccCC--CCCCCHHHHHH
Q 040501 157 VIKGKHPRDFLSNVSSSNPNILVNEMLDPR-LPPLSVDIRGKVISIMEVAFLCLDNNP--ESRPNMQTICQ 224 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p--~~Rpt~~~il~ 224 (228)
|++|..||..... ......+.... ...........+..+.+++.+||..++ ..|+++.++++
T Consensus 201 l~~g~~Pf~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 201 MLYGETPFYAESL------VETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred HhhCCCCCCCCCH------HHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 9999999853221 11222221111 111111122356678899999886543 34788888875
No 276
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-38 Score=249.35 Aligned_cols=154 Identities=23% Similarity=0.362 Sum_probs=132.2
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
....|+.++++++|+||+++++++......++|+|++. ++|.+++.... ..+++..++.++.|++.||.|||+.
T Consensus 103 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~--- 176 (357)
T PHA03209 103 TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHAQ--- 176 (357)
T ss_pred ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 34679999999999999999999999999999999996 47777765433 3388999999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p 163 (228)
|++||||||+||+++.++.++|+|||.+...... .......|+..|+|||++.+..++.++|||||||++|+|+++..+
T Consensus 177 ~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~ 255 (357)
T PHA03209 177 RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPST 255 (357)
T ss_pred CeecCCCCHHHEEECCCCCEEEecCccccccccC-cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCc
Confidence 9999999999999999999999999998753322 222345688999999999998899999999999999999985554
Q ss_pred c
Q 040501 164 R 164 (228)
Q Consensus 164 ~ 164 (228)
+
T Consensus 256 ~ 256 (357)
T PHA03209 256 I 256 (357)
T ss_pred c
Confidence 3
No 277
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.2e-37 Score=238.15 Aligned_cols=213 Identities=25% Similarity=0.377 Sum_probs=165.2
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeee-----ecCeEEEEEEeecCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCT-----HARHSFLVYEYLENGSLSVILNND-TSAEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~ 75 (228)
..+.+|+.+++.+ +|+||+++++++. .+...+++|||+++++|.+++... .....+++..+..++.|++.|+.
T Consensus 59 ~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~ 138 (286)
T cd06638 59 EEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQ 138 (286)
T ss_pred HHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHH
Confidence 4577899999999 6999999999874 345789999999999999887642 22334788899999999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-----CCcccchhhhhH
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-----MKVTAKCDVYSF 150 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Diwsl 150 (228)
|||+. +++|+||+|+||+++.++.++++|||.+..............++..|+|||.+.. ..++.++|+||+
T Consensus 139 ~lH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl 215 (286)
T cd06638 139 HLHVN---KTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSL 215 (286)
T ss_pred HHHhC---CccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhH
Confidence 99999 9999999999999999999999999998766543333344568889999998753 346889999999
Q ss_pred HHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 151 GVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 151 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
|+++|++++|..||...... ...........+... ....++..+.+++.+||+.||.+|||+.++++.
T Consensus 216 Gvi~~el~~g~~p~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 216 GITAIELGDGDPPLADLHPM------RALFKIPRNPPPTLH-QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred HHHHHHHhcCCCCCCCCchh------HHHhhccccCCCccc-CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 99999999999997643221 111111111111110 111234568899999999999999999999874
No 278
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.3e-38 Score=243.51 Aligned_cols=216 Identities=25% Similarity=0.397 Sum_probs=166.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+||+++++++......|+|+||+.+++|..+..... .+++.+++.++.|++.+++|||+.
T Consensus 45 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~-- 119 (286)
T cd07846 45 KIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPN---GLDESRVRKYLFQILRGIEFCHSH-- 119 (286)
T ss_pred HHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 467899999999999999999999999999999999999988888765432 278999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++|+|||++..............++..|+|||.+.+. .++.++||||||+++|++++|.
T Consensus 120 -~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~ 198 (286)
T cd07846 120 -NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGE 198 (286)
T ss_pred -CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999987655443333445678889999988754 4678999999999999999999
Q ss_pred CCccccccccCCCc------------------hhhhhhhcCCCCCC---CchhhhhhHHHHHHHHHHhhccCCCCCCCHH
Q 040501 162 HPRDFLSNVSSSNP------------------NILVNEMLDPRLPP---LSVDIRGKVISIMEVAFLCLDNNPESRPNMQ 220 (228)
Q Consensus 162 ~p~~~~~~~~~~~~------------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 220 (228)
+||........... .........+.... ......+.+..+.+++.+||+.+|.+|||+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~ 278 (286)
T cd07846 199 PLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSS 278 (286)
T ss_pred CCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHH
Confidence 99853321100000 00000000000000 0011224567799999999999999999999
Q ss_pred HHHH
Q 040501 221 TICQ 224 (228)
Q Consensus 221 ~il~ 224 (228)
++++
T Consensus 279 ~il~ 282 (286)
T cd07846 279 QLLH 282 (286)
T ss_pred HHhc
Confidence 9875
No 279
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2e-37 Score=236.06 Aligned_cols=206 Identities=28% Similarity=0.461 Sum_probs=169.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.++++++|+||+++++.+..+...|+|+||+++++|.+++... .++...+..++.+++.++.+||+.
T Consensus 47 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~-- 120 (277)
T cd06641 47 EDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE-- 120 (277)
T ss_pred HHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccC--
Confidence 46788999999999999999999999999999999999999999988643 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++++|||++..............++..|+|||.+.+..++.++|+||+|+++|++++|..
T Consensus 121 -~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~ 199 (277)
T cd06641 121 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEP 199 (277)
T ss_pred -CeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999988765543333334567788999999988888899999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||..... ......+.....+.. ....+.++.+++.+||..+|.+||++.++++
T Consensus 200 p~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 200 PHSELHP------MKVLFLIPKNNPPTL---EGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred CCCccch------HHHHHHHhcCCCCCC---CcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9753221 112222211211111 1235567889999999999999999999987
No 280
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.7e-37 Score=237.96 Aligned_cols=212 Identities=26% Similarity=0.387 Sum_probs=165.2
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeec-----CeEEEEEEeecCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHA-----RHSFLVYEYLENGSLSVILNND-TSAEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~ 75 (228)
+.+.+|+.+++++ +|+|++++++++... ...|+|+||+.+++|.+++... .....+++..++.++.|++.||.
T Consensus 63 ~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~ 142 (291)
T cd06639 63 EEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQ 142 (291)
T ss_pred HHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHH
Confidence 4567899999999 799999999998653 3689999999999999988642 12234789999999999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-----CcccchhhhhH
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-----KVTAKCDVYSF 150 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~Diwsl 150 (228)
+||+. |++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+... .++.++|+||+
T Consensus 143 ~lH~~---~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~sl 219 (291)
T cd06639 143 HLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSL 219 (291)
T ss_pred HHHhC---CeeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHH
Confidence 99999 99999999999999999999999999987655433333345678889999987543 25789999999
Q ss_pred HHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 151 GVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 151 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|+++|+|++|..||..... ......+.....+... ........+.++|.+||+.+|.+|||+.++++
T Consensus 220 Gvi~~el~~g~~p~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 220 GITAIELGDGDPPLFDMHP------VKTLFKIPRNPPPTLL-HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHHHHHhhCCCCCCCCcH------HHHHHHHhcCCCCCCC-cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 9999999999999754321 1112222222111111 11234457899999999999999999999985
No 281
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=9.4e-38 Score=239.58 Aligned_cols=208 Identities=25% Similarity=0.424 Sum_probs=169.0
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++||||+++++++......|+|+||+.+++|.+++... .++...+..++.|++.|+.+||+.
T Consensus 61 ~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~-- 134 (293)
T cd06647 61 ELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN-- 134 (293)
T ss_pred HHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 46788999999999999999999999999999999999999999998653 267888999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++|+|||.+..............+++.|++||.+.+..++.++|+||||+++|++++|..
T Consensus 135 -gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~ 213 (293)
T cd06647 135 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 213 (293)
T ss_pred -CEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999988765544333344567788999999888888999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||....... ..........+. .......+..+.+++.+||..+|.+||++.++++
T Consensus 214 pf~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 214 PYLNENPLR------ALYLIATNGTPE-LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 268 (293)
T ss_pred CCCCCChhh------heeehhcCCCCC-CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 986432211 111111111111 1112234557889999999999999999999985
No 282
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.5e-37 Score=236.00 Aligned_cols=210 Identities=26% Similarity=0.392 Sum_probs=166.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+|++++++++......++|+||+.+++|.+++.... .++...+..++.|++.|+.+||+.
T Consensus 53 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~-- 127 (272)
T cd06629 53 KALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLHSK-- 127 (272)
T ss_pred HHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhC--
Confidence 357789999999999999999999999999999999999999999987653 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCC--CceecccccceeCCcccccCC--cccchhhhhHHHHHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS--NWTEFAGTYGYVAPELAYTMK--VTAKCDVYSFGVLALEVI 158 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~--~~~~~DiwslG~~l~~~~ 158 (228)
|++|+||+|+||+++.++.++++|||.+........ ......++..|+|||.+.... ++.++|+||||+++|+++
T Consensus 128 -~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~ 206 (272)
T cd06629 128 -GILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMF 206 (272)
T ss_pred -CeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHH
Confidence 999999999999999999999999998876432211 122345678899999887654 788999999999999999
Q ss_pred hCCCCccccccccCCCchhhhhhhc-CCCCCC-CchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 159 KGKHPRDFLSNVSSSNPNILVNEML-DPRLPP-LSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 159 ~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+|..||..... ........ ...... ........+.++.+++.+||..+|.+|||++++++
T Consensus 207 ~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 207 AGRRPWSDEEA------IAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred hCCCCCcCcch------HHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 99999753211 11111111 111111 11112345678999999999999999999999986
No 283
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.7e-37 Score=234.66 Aligned_cols=210 Identities=30% Similarity=0.460 Sum_probs=168.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++.+......++++||+.+++|.+++.... .+++..+..++.+++.|+.+||+.
T Consensus 44 ~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~-- 118 (264)
T cd06626 44 KEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSH-- 118 (264)
T ss_pred HHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHC--
Confidence 568899999999999999999999999999999999999999999987543 267888999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCce----ecccccceeCCcccccCC---cccchhhhhHHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT----EFAGTYGYVAPELAYTMK---VTAKCDVYSFGVLAL 155 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~---~~~~~DiwslG~~l~ 155 (228)
|++|+||+|+||+++.++.++|+|||.+........... ...++..|+|||.+.+.. .+.++|+||+|+++|
T Consensus 119 -~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~ 197 (264)
T cd06626 119 -GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVL 197 (264)
T ss_pred -CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHH
Confidence 999999999999999999999999999887654333211 245678999999988766 788999999999999
Q ss_pred HHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 156 EVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++++|..||..... .............+..+ .....+..+.+++.+||+.+|.+|||+.+++.
T Consensus 198 ~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 198 EMATGKRPWSELDN-----EFQIMFHVGAGHKPPIP-DSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred HHHhCCCCccCCcc-----hHHHHHHHhcCCCCCCC-cccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 99999999863321 11111111111111111 12234667889999999999999999999875
No 284
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=8.3e-38 Score=238.75 Aligned_cols=217 Identities=21% Similarity=0.296 Sum_probs=166.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+|++++++++......|+++||++ ++|.+++..... ..+++..++.++.|++.||+|||+.
T Consensus 43 ~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~-- 118 (283)
T cd07835 43 STAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSH-- 118 (283)
T ss_pred hHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 457889999999999999999999999999999999995 588888865442 3489999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~g~ 161 (228)
+++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+.+. .++.++|+||||+++|++++|.
T Consensus 119 -~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 197 (283)
T cd07835 119 -RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRR 197 (283)
T ss_pred -CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999987654333323334557889999987664 4688999999999999999999
Q ss_pred CCccccccccCCC--------ch-----------hhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHH
Q 040501 162 HPRDFLSNVSSSN--------PN-----------ILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222 (228)
Q Consensus 162 ~p~~~~~~~~~~~--------~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i 222 (228)
.||.......... +. .....................+..+.++|.+||+.+|.+|||++++
T Consensus 198 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~i 277 (283)
T cd07835 198 PLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAA 277 (283)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 9986432210000 00 0000000011111111223455678899999999999999999999
Q ss_pred HH
Q 040501 223 CQ 224 (228)
Q Consensus 223 l~ 224 (228)
++
T Consensus 278 l~ 279 (283)
T cd07835 278 LQ 279 (283)
T ss_pred hc
Confidence 75
No 285
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.9e-37 Score=233.61 Aligned_cols=206 Identities=27% Similarity=0.414 Sum_probs=168.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+||+++++++......|+++||+++++|.+++.... .+++..+..++.|++.++++||+.
T Consensus 47 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~-- 121 (258)
T cd06632 47 KQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDR-- 121 (258)
T ss_pred HHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 467899999999999999999999999999999999999999999987543 378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCC-cccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++|+|||.+....... ......++..|++||.+.... ++.++|+||+|+++|++++|.
T Consensus 122 -~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~ 199 (258)
T cd06632 122 -NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK 199 (258)
T ss_pred -CcccCCCCHHHEEECCCCCEEEccCccceeccccc-cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence 99999999999999999999999999887654332 223456788899999887766 889999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcC-CCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLD-PRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.||..... ......... ...+.. ....+..+.+++.+||..+|.+|||+.++++
T Consensus 200 ~pf~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 200 PPWSQLEG------VAAVFKIGRSKELPPI---PDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred CCcccCcH------HHHHHHHHhcccCCCc---CCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 99854321 111111111 111111 1234567889999999999999999999975
No 286
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=4.7e-38 Score=240.62 Aligned_cols=217 Identities=26% Similarity=0.368 Sum_probs=166.5
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++.+.+|++++++++|+||+++++++..+...++++||+.++.+..+.... ..++...++.++.|++.|+.+||+.
T Consensus 44 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~- 119 (288)
T cd07833 44 KKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCHSH- 119 (288)
T ss_pred hhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 356889999999999999999999999999999999999987776665433 2378999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCC-CceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHh
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS-NWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~ 159 (228)
|++|+||+|+||+++.++.++|+|||.+........ ......++..|+|||++.+. .++.++|+||||+++|++++
T Consensus 120 --~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~ 197 (288)
T cd07833 120 --NIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLD 197 (288)
T ss_pred --CeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHh
Confidence 999999999999999999999999999887654432 23335567889999999887 78899999999999999999
Q ss_pred CCCCccccccccCCC----------chhhh----hhhcCC-CCCCCc--hh-----hhhhHHHHHHHHHHhhccCCCCCC
Q 040501 160 GKHPRDFLSNVSSSN----------PNILV----NEMLDP-RLPPLS--VD-----IRGKVISIMEVAFLCLDNNPESRP 217 (228)
Q Consensus 160 g~~p~~~~~~~~~~~----------~~~~~----~~~~~~-~~~~~~--~~-----~~~~~~~~~~li~~~l~~~p~~Rp 217 (228)
|..||.......... ..... ...... ..+... .. ...++.++.++|++||..+|.+||
T Consensus 198 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 277 (288)
T cd07833 198 GEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERL 277 (288)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcc
Confidence 999986432111000 00000 000000 000000 00 012366789999999999999999
Q ss_pred CHHHHHH
Q 040501 218 NMQTICQ 224 (228)
Q Consensus 218 t~~~il~ 224 (228)
|++++++
T Consensus 278 s~~~il~ 284 (288)
T cd07833 278 TCDELLQ 284 (288)
T ss_pred cHHHHhc
Confidence 9999875
No 287
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.3e-37 Score=232.98 Aligned_cols=211 Identities=27% Similarity=0.435 Sum_probs=175.0
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT-SAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
++.+.+|+++++.++|+|++++.+.+......++++|++++++|.+++.... ....++...+..++.+++.|+.+||+.
T Consensus 43 ~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~ 122 (258)
T cd08215 43 REDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR 122 (258)
T ss_pred HHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 4568899999999999999999999999999999999999999999987642 124589999999999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhC
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g 160 (228)
|++|+||+|+||+++.++.++|+|||.+..............+++.|+|||...+..++.++|+||+|+++++|++|
T Consensus 123 ---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g 199 (258)
T cd08215 123 ---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTL 199 (258)
T ss_pred ---CEecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcC
Confidence 99999999999999999999999999988765443233345678889999998888889999999999999999999
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
..||.... ................+. ..+..+.+++.+||..+|.+|||+.++++
T Consensus 200 ~~p~~~~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 200 KHPFEGEN------LLELALKILKGQYPPIPS---QYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCCCCCc------HHHHHHHHhcCCCCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 99975332 223333333333332221 45567899999999999999999999986
No 288
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-37 Score=254.51 Aligned_cols=218 Identities=16% Similarity=0.244 Sum_probs=159.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS--AEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
..+.+|++++++++|+||+++++++......|++++++.+ +|..++..... .......++..++.|++.||.|||+.
T Consensus 208 ~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~ 286 (501)
T PHA03210 208 IQLENEILALGRLNHENILKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK 286 (501)
T ss_pred HHHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999999999999999999999999854 56665543211 12234567788999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
||+||||||+||+++.++.+||+|||++......... .....|+..|+|||++.+..++.++|||||||++|+|++
T Consensus 287 ---gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~ 363 (501)
T PHA03210 287 ---KLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLS 363 (501)
T ss_pred ---CeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999866543222 233568999999999999889999999999999999999
Q ss_pred CCCC-ccccccccCCCchhhhh-----------------hhcC-CCCC----CCch--hhhhhHHHHHHHHHHhhccCCC
Q 040501 160 GKHP-RDFLSNVSSSNPNILVN-----------------EMLD-PRLP----PLSV--DIRGKVISIMEVAFLCLDNNPE 214 (228)
Q Consensus 160 g~~p-~~~~~~~~~~~~~~~~~-----------------~~~~-~~~~----~~~~--~~~~~~~~~~~li~~~l~~~p~ 214 (228)
|..+ +................ ..+. .... .... .....+..+.++|.+||..||.
T Consensus 364 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~ 443 (501)
T PHA03210 364 HDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWH 443 (501)
T ss_pred CCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcc
Confidence 8754 33211100000000000 0000 0000 0000 0112344577889999999999
Q ss_pred CCCCHHHHHH
Q 040501 215 SRPNMQTICQ 224 (228)
Q Consensus 215 ~Rpt~~~il~ 224 (228)
+|||+.|+++
T Consensus 444 ~Rpsa~elL~ 453 (501)
T PHA03210 444 LRPGAAELLA 453 (501)
T ss_pred cCcCHHHHhh
Confidence 9999999986
No 289
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.1e-37 Score=236.82 Aligned_cols=214 Identities=22% Similarity=0.364 Sum_probs=166.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.++++++|+||+++++++..+...++|+|++ +++|.+++.... ..+++.+++.++.|++.+|.|||+.
T Consensus 44 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~-- 118 (286)
T cd07832 44 NQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHAN-- 118 (286)
T ss_pred HHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 46889999999999999999999999999999999999 999999986544 3489999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCC-CceecccccceeCCcccccCC-cccchhhhhHHHHHHHHHhC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS-NWTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~~~~g 160 (228)
|++|+||+|+||+++.++.++++|||.+........ ......++..|+|||.+.+.. ++.++||||+|+++|++++|
T Consensus 119 -~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg 197 (286)
T cd07832 119 -GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNG 197 (286)
T ss_pred -CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999886654322 123356788999999886544 58899999999999999999
Q ss_pred CCCccccccccCCCchhhhh--------------------hhcCCCCCC--CchhhhhhHHHHHHHHHHhhccCCCCCCC
Q 040501 161 KHPRDFLSNVSSSNPNILVN--------------------EMLDPRLPP--LSVDIRGKVISIMEVAFLCLDNNPESRPN 218 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 218 (228)
.++|......... ..... .+....... ......+.+..+.+++.+||+.+|.+|||
T Consensus 198 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~ 275 (286)
T cd07832 198 SPLFPGENDIEQL--AIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLS 275 (286)
T ss_pred CcCcCCCCHHHHH--HHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCC
Confidence 8887532211000 00000 000000000 00011234578899999999999999999
Q ss_pred HHHHHH
Q 040501 219 MQTICQ 224 (228)
Q Consensus 219 ~~~il~ 224 (228)
++++++
T Consensus 276 ~~~~l~ 281 (286)
T cd07832 276 AAEALR 281 (286)
T ss_pred HHHHhh
Confidence 999985
No 290
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.4e-37 Score=231.97 Aligned_cols=210 Identities=29% Similarity=0.472 Sum_probs=171.0
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+.+|++.++.++|++++++++++......++++|++++++|.+++.... ..++...+..++.|++.++.+||+.
T Consensus 41 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~- 117 (253)
T cd05122 41 KEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN- 117 (253)
T ss_pred HHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC-
Confidence 3568899999999999999999999999999999999999999999987653 3489999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++|+|||.+........ .....++..|+|||.+.+..++.++|+||||+++|++++|.
T Consensus 118 --~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~ 194 (253)
T cd05122 118 --GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGK 194 (253)
T ss_pred --CEecCCCCHHHEEEccCCeEEEeecccccccccccc-ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999887654332 23456788899999998888899999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.||..... ............+... .....+..+.+++.+||..||++|||+.++++
T Consensus 195 ~p~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 195 PPYSELPP------MKALFKIATNGPPGLR-NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CCCCCCch------HHHHHHHHhcCCCCcC-cccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 99764321 1111111111111111 11123567899999999999999999999875
No 291
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.4e-37 Score=242.61 Aligned_cols=210 Identities=20% Similarity=0.257 Sum_probs=164.1
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+..|+.++..++|++|+++++.+......|+||||+.+++|.+++..... .+++..+..++.|++.|+.|||+.
T Consensus 47 ~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--~l~~~~~~~~~~qi~~al~~lH~~--- 121 (332)
T cd05623 47 CFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVIAIDSVHQL--- 121 (332)
T ss_pred HHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 477899999999999999999999999999999999999999999976332 378889999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCccccc-----CCcccchhhhhHHHHHHHH
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYT-----MKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~-----~~~~~~~DiwslG~~l~~~ 157 (228)
|++||||||+||+++.++.++|+|||++......... .....|++.|+|||++.+ ..++.++|+||||+++|+|
T Consensus 122 ~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~el 201 (332)
T cd05623 122 HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEM 201 (332)
T ss_pred CeEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHH
Confidence 9999999999999999999999999998754332221 223568999999998863 3578899999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCC-CCCchhhhhhHHHHHHHHHHhhccCCC--CCCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRL-PPLSVDIRGKVISIMEVAFLCLDNNPE--SRPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~--~Rpt~~~il~ 224 (228)
++|..||.... .......+..... ...+......+.++.+++++||..++. .|+++.++++
T Consensus 202 l~g~~Pf~~~~------~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~ 265 (332)
T cd05623 202 LYGETPFYAES------LVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ 265 (332)
T ss_pred hcCCCCCCCCC------HHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhC
Confidence 99999985332 2222222322211 111112234567789999999965444 3688888865
No 292
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=9.4e-38 Score=236.00 Aligned_cols=210 Identities=25% Similarity=0.365 Sum_probs=169.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++.+..+...|+++|++.+++|.+++.... .+++..++.++.|++.+|.+||+.
T Consensus 38 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~-- 112 (265)
T cd05579 38 DQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVG---SLDEDVARIYIAEIVLALEYLHSN-- 112 (265)
T ss_pred HHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHc--
Confidence 467889999999999999999999999999999999999999999987644 389999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCC--------CceecccccceeCCcccccCCcccchhhhhHHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS--------NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLA 154 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l 154 (228)
|++|+||+|+||+++.++.++|+|||++........ ......++..|++||...+...+.++|+||||+++
T Consensus 113 -~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~ 191 (265)
T cd05579 113 -GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCIL 191 (265)
T ss_pred -CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHH
Confidence 999999999999999999999999998876543311 12234567789999998888888999999999999
Q ss_pred HHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHh
Q 040501 155 LEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226 (228)
Q Consensus 155 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 226 (228)
|++++|..||.... ................. ....+..+.+++.+||+.+|.+|||+..+.+.|
T Consensus 192 ~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 192 YEFLVGIPPFHGET------PEEIFQNILNGKIEWPE--DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred HHHHhCCCCCCCCC------HHHHHHHHhcCCcCCCc--cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 99999999985332 22222222222221111 112366789999999999999999995555554
No 293
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2.1e-37 Score=236.60 Aligned_cols=218 Identities=20% Similarity=0.317 Sum_probs=166.0
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++++...+..++|+||+.+ +|.+++........+++.++..++.|++.||.|||+.
T Consensus 43 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-- 119 (284)
T cd07836 43 STAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN-- 119 (284)
T ss_pred HHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC--
Confidence 4567899999999999999999999999999999999975 7888876655444589999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++++|||.+..............++..|++||.+.+. .++.++|+||||+++|++++|.
T Consensus 120 -~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~ 198 (284)
T cd07836 120 -RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGR 198 (284)
T ss_pred -CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999987654333223334567889999987654 4688999999999999999999
Q ss_pred CCccccccccCCCc---------hhhhhhh-----cCCCCCCCc-----hhhhhhHHHHHHHHHHhhccCCCCCCCHHHH
Q 040501 162 HPRDFLSNVSSSNP---------NILVNEM-----LDPRLPPLS-----VDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222 (228)
Q Consensus 162 ~p~~~~~~~~~~~~---------~~~~~~~-----~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i 222 (228)
.||........... ....... .....+... ......+..+.+++.+||+.||.+|||++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~ 278 (284)
T cd07836 199 PLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDA 278 (284)
T ss_pred CCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHH
Confidence 99864321100000 0000000 000001000 0012335568899999999999999999998
Q ss_pred HH
Q 040501 223 CQ 224 (228)
Q Consensus 223 l~ 224 (228)
++
T Consensus 279 l~ 280 (284)
T cd07836 279 LQ 280 (284)
T ss_pred hc
Confidence 75
No 294
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.6e-37 Score=237.20 Aligned_cols=215 Identities=22% Similarity=0.279 Sum_probs=163.8
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeec--CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+|++++++++||||+++.+++... ...|+++||+.+ +|.+++..... .++...++.++.|++.||+|||+.
T Consensus 50 ~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~- 125 (293)
T cd07843 50 TSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHDN- 125 (293)
T ss_pred hHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 467899999999999999999998777 899999999975 88888865433 489999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCC-cccchhhhhHHHHHHHHHhC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~~~~g 160 (228)
|++|+||+|+||+++.++.++|+|||.+..............+++.|+|||.+.+.. ++.++|+||+|+++|+|++|
T Consensus 126 --~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g 203 (293)
T cd07843 126 --WILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTK 203 (293)
T ss_pred --CeeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhC
Confidence 999999999999999999999999999887665433333455678899999887654 68899999999999999999
Q ss_pred CCCccccccccCCCc---------hh------hhh-----hhcCCCCCCCchhhhh--hHHHHHHHHHHhhccCCCCCCC
Q 040501 161 KHPRDFLSNVSSSNP---------NI------LVN-----EMLDPRLPPLSVDIRG--KVISIMEVAFLCLDNNPESRPN 218 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~---------~~------~~~-----~~~~~~~~~~~~~~~~--~~~~~~~li~~~l~~~p~~Rpt 218 (228)
..||........... .. ... ................ .+..+.++|.+||+.+|++|||
T Consensus 204 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t 283 (293)
T cd07843 204 KPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRIS 283 (293)
T ss_pred CCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCC
Confidence 999864321100000 00 000 0000000000001111 3566889999999999999999
Q ss_pred HHHHHH
Q 040501 219 MQTICQ 224 (228)
Q Consensus 219 ~~~il~ 224 (228)
+.++++
T Consensus 284 ~~ell~ 289 (293)
T cd07843 284 AEDALK 289 (293)
T ss_pred HHHHhc
Confidence 999985
No 295
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.2e-37 Score=238.58 Aligned_cols=209 Identities=23% Similarity=0.390 Sum_probs=164.7
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+.+|+.+++.++|+||+++++++... ..+++++++++++|.+++..+.. .++...++.++.|++.||.|||+.
T Consensus 55 ~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~--- 128 (303)
T cd05110 55 EFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKD--NIGSQLLLNWCVQIAKGMMYLEER--- 128 (303)
T ss_pred HHHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHhhc---
Confidence 578899999999999999999998654 46789999999999999875432 378899999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-C
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-G 160 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g 160 (228)
|++|+||||+||+++.++.+||+|||++......... .....++..|+|||.+.+..++.++||||||+++|++++ |
T Consensus 129 ~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g 208 (303)
T cd05110 129 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFG 208 (303)
T ss_pred CeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999865433221 112334668999999988889999999999999999997 8
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
..||...... ............+. ...++..+.+++.+||..+|.+||+++++++.|.
T Consensus 209 ~~p~~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~ 266 (303)
T cd05110 209 GKPYDGIPTR------EIPDLLEKGERLPQ---PPICTIDVYMVMVKCWMIDADSRPKFKELAAEFS 266 (303)
T ss_pred CCCCCCCCHH------HHHHHHHCCCCCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 8997543211 11111111111111 1123456889999999999999999999998875
No 296
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=251.60 Aligned_cols=204 Identities=26% Similarity=0.436 Sum_probs=172.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
.++..|+..|++++|||++.+.++|-.....|+|||||- |+-.|++.-+. +++.+-.+..++.+.+.||+|||+.
T Consensus 71 qDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl-GSAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~-- 145 (948)
T KOG0577|consen 71 QDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH-- 145 (948)
T ss_pred HHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-ccHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHh--
Confidence 467899999999999999999999999999999999995 47777776543 3377888889999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc---CCcccchhhhhHHHHHHHHHh
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT---MKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~~l~~~~~ 159 (228)
+.+|||||..||++++.|.|||.|||.+....+ ..++.|||.|||||++.. +.|+.++||||||++-.++..
T Consensus 146 -~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P----AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAE 220 (948)
T KOG0577|consen 146 -NRIHRDIKAGNILLSEPGLVKLADFGSASIMAP----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 220 (948)
T ss_pred -hHHhhhccccceEecCCCeeeeccccchhhcCc----hhcccCCccccchhHheeccccccCCccceeeccchhhhhhh
Confidence 999999999999999999999999999876543 345799999999998864 469999999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.++|...++.+ ..++.+.....|.... ..-+..+..++..||++-|.+|||.+++++
T Consensus 221 RkPPlFnMNAM------SALYHIAQNesPtLqs--~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 221 RKPPLFNMNAM------SALYHIAQNESPTLQS--NEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred cCCCccCchHH------HHHHHHHhcCCCCCCC--chhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 99996655433 3555665555544432 355667899999999999999999999875
No 297
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=3.3e-37 Score=236.41 Aligned_cols=210 Identities=21% Similarity=0.294 Sum_probs=160.1
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+.+|+++++.++|+||+++.+++..+...|+|+||+. +++.+++.... ..++...+..++.|++.||.|||+.
T Consensus 49 ~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~--- 122 (291)
T cd07870 49 TAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQ--- 122 (291)
T ss_pred HHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 56789999999999999999999999999999999996 56666654432 2367788889999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHhCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||||+||+++.++.++|+|||++..............+++.|+|||.+.+. .++.++|+||||+++|++++|..
T Consensus 123 ~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~ 202 (291)
T cd07870 123 HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQP 202 (291)
T ss_pred CcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999887654333333334567889999988654 47889999999999999999999
Q ss_pred CccccccccCCCchhhhhhh-------------------------cCCCCCCC-ch--hhhhhHHHHHHHHHHhhccCCC
Q 040501 163 PRDFLSNVSSSNPNILVNEM-------------------------LDPRLPPL-SV--DIRGKVISIMEVAFLCLDNNPE 214 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~-~~--~~~~~~~~~~~li~~~l~~~p~ 214 (228)
||...... ....... .....+.. .. ........+.+++.+||..||+
T Consensus 203 ~f~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~ 277 (291)
T cd07870 203 AFPGVSDV-----FEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPK 277 (291)
T ss_pred CCCCchhH-----HHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcc
Confidence 98643211 0000000 00000000 00 0011245688999999999999
Q ss_pred CCCCHHHHHH
Q 040501 215 SRPNMQTICQ 224 (228)
Q Consensus 215 ~Rpt~~~il~ 224 (228)
+|||+.+++.
T Consensus 278 ~R~t~~~~l~ 287 (291)
T cd07870 278 DRISAQDALL 287 (291)
T ss_pred cCcCHHHHhc
Confidence 9999999874
No 298
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.3e-37 Score=242.56 Aligned_cols=210 Identities=21% Similarity=0.249 Sum_probs=164.4
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+.+|+.++..++|++|+++++++...+..|+||||+.+++|.+++..... .+++..+..++.|++.||.|||+.
T Consensus 47 ~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~~L~~lH~~--- 121 (331)
T cd05624 47 CFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYIAEMVLAIHSIHQL--- 121 (331)
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 467899999999999999999999999999999999999999999976332 378899999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCccccc-----CCcccchhhhhHHHHHHHH
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYT-----MKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~-----~~~~~~~DiwslG~~l~~~ 157 (228)
|++||||||+||+++.++.++|+|||++......... .....|++.|+|||++.+ ..++.++|+||+|+++|+|
T Consensus 122 ~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~el 201 (331)
T cd05624 122 HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 201 (331)
T ss_pred CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhh
Confidence 9999999999999999999999999998765433222 223568999999998875 4578899999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCC-CCCchhhhhhHHHHHHHHHHhhccCCCC--CCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRL-PPLSVDIRGKVISIMEVAFLCLDNNPES--RPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rpt~~~il~ 224 (228)
++|..||.... .......+..... ...+......+.++.+++.+||..++++ |++++++++
T Consensus 202 l~g~~Pf~~~~------~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 202 LYGETPFYAES------LVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred hhCCCCccCCC------HHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 99999985332 1222222222111 1111222345667899999999866544 467777764
No 299
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-39 Score=260.17 Aligned_cols=213 Identities=26% Similarity=0.502 Sum_probs=182.3
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
|.+|+.|+.+|-++.||||+++-++.+..+...||.|||.+|+|+.+++.+.. .+...+...+++.|+.|++||.+.
T Consensus 674 rrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLsdm- 750 (996)
T KOG0196|consen 674 RRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLSDM- 750 (996)
T ss_pred HhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHhhc-
Confidence 67899999999999999999999999999999999999999999999987663 389999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecc--cccceeCCcccccCCcccchhhhhHHHHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFA--GTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~--~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~ 158 (228)
|+|||||...|||++.+-.+|++|||+++...++... .+... -+.+|.|||.+...+++.+|||||+|++|||.+
T Consensus 751 --~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVm 828 (996)
T KOG0196|consen 751 --NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 828 (996)
T ss_pred --CchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEec
Confidence 9999999999999999999999999999987655533 22222 267899999999999999999999999999988
Q ss_pred h-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 159 K-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 159 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
+ |..||..+. ..+.+..+.++...+.+ .+++..+.+|+..||++|-.+||++.+|+..|.|
T Consensus 829 SyGERPYWdmS------NQdVIkaIe~gyRLPpP---mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDk 890 (996)
T KOG0196|consen 829 SYGERPYWDMS------NQDVIKAIEQGYRLPPP---MDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDK 890 (996)
T ss_pred ccCCCcccccc------hHHHHHHHHhccCCCCC---CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 6 999965433 33444444444433322 3677789999999999999999999999998864
No 300
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.4e-37 Score=233.47 Aligned_cols=206 Identities=21% Similarity=0.272 Sum_probs=162.1
Q ss_pred HHHHHHHHh-ccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 5 FLREITVLT-EIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 5 ~~~E~~~l~-~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
+..|..++. ..+|+|++++++.+..+...|+++||+++++|.+++.... .++...+..++.|++.||.|||+.
T Consensus 43 ~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~--- 116 (260)
T cd05611 43 VKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQR--- 116 (260)
T ss_pred HHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 344544444 3489999999999999999999999999999999987543 378899999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p 163 (228)
|++|+||+|+||+++.++.++|+|||.+..... .....++..|++||.+.+..++.++|+||+|+++|++++|..|
T Consensus 117 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p 192 (260)
T cd05611 117 GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPP 192 (260)
T ss_pred CeecCCCCHHHeEECCCCcEEEeecccceeccc----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCC
Confidence 999999999999999999999999998875432 2234577889999999888889999999999999999999999
Q ss_pred ccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHh
Q 040501 164 RDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226 (228)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 226 (228)
|.... .......................+..+.+++.+||..+|.+|||+.++.+.|
T Consensus 193 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 193 FHAET------PDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred CCCCC------HHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 85322 1222222222221111111224566789999999999999999876665554
No 301
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=4.9e-37 Score=232.53 Aligned_cols=206 Identities=25% Similarity=0.373 Sum_probs=161.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeee--cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTH--ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
+.+.+|+.++++++|+||+++++++.. ....++++|++.+++|.+++..... ++....+.++.|++.||++||+.
T Consensus 49 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~LH~~ 125 (266)
T cd06651 49 SALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGA---LTESVTRKYTRQILEGMSYLHSN 125 (266)
T ss_pred HHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhC
Confidence 357889999999999999999998865 3678899999999999999875432 78888999999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCC---CCceecccccceeCCcccccCCcccchhhhhHHHHHHHH
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS---SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~ 157 (228)
+++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+..++.++|+||+|+++|++
T Consensus 126 ---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el 202 (266)
T cd06651 126 ---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEM 202 (266)
T ss_pred ---CeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHH
Confidence 99999999999999999999999999987543211 111234577889999999888899999999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhc-CCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEML-DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++|..||..... ........ ....+.. .......+.+++ +||..+|.+|||++++++
T Consensus 203 ~~g~~pf~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 203 LTEKPPWAEYEA------MAAIFKIATQPTNPQL---PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HHCCCCccccch------HHHHHHHhcCCCCCCC---chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 999999863311 11111111 1111111 123344567777 688889999999999985
No 302
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=4.2e-37 Score=240.79 Aligned_cols=214 Identities=23% Similarity=0.389 Sum_probs=164.9
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeee-cCeEEEEEEeecCCChhhhhhcCCC--------------------------
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTH-ARHSFLVYEYLENGSLSVILNNDTS-------------------------- 54 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~-------------------------- 54 (228)
+.+.+|+.++.++ +|+||+++++++.. +...+++|||+++++|.+++.....
T Consensus 55 ~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (343)
T cd05103 55 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDL 134 (343)
T ss_pred HHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhh
Confidence 3578899999999 68999999998854 4567899999999999999864321
Q ss_pred --------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeecCCCCCceE
Q 040501 55 --------------------------------------AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVL 96 (228)
Q Consensus 55 --------------------------------------~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~di~p~nil 96 (228)
...+++.++..++.|++.||+|||+. |++|+||||+||+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil 211 (343)
T cd05103 135 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNIL 211 (343)
T ss_pred hhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEE
Confidence 12367788889999999999999999 9999999999999
Q ss_pred EcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-CCCCccccccccCC
Q 040501 97 LDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSS 173 (228)
Q Consensus 97 ~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g~~p~~~~~~~~~~ 173 (228)
++.++.++|+|||++......... .....++..|+|||.+.+..++.++|+||||+++|++++ |..||.....
T Consensus 212 ~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---- 287 (343)
T cd05103 212 LSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI---- 287 (343)
T ss_pred EcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc----
Confidence 999999999999998765322211 112334567999999988889999999999999999996 9999854221
Q ss_pred CchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 174 NPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
................+ ...+..+.+++.+||+.+|.+|||+.++++.|+
T Consensus 288 -~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~ 337 (343)
T cd05103 288 -DEEFCRRLKEGTRMRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 337 (343)
T ss_pred -cHHHHHHHhccCCCCCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11111111111111111 123456889999999999999999999999886
No 303
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-38 Score=252.10 Aligned_cols=211 Identities=27% Similarity=0.397 Sum_probs=173.9
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
-+..||.+-++|+|.|||++++.+.+++++-|.||-++||+|.++++..=..-.=++.+.-.+.+||++||+|||..
T Consensus 618 PLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen--- 694 (1226)
T KOG4279|consen 618 PLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN--- 694 (1226)
T ss_pred cHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---
Confidence 35689999999999999999999999999999999999999999998643222237888889999999999999999
Q ss_pred CeeecCCCCCceEEcC-CCceEEeecccccccCCCCCCceecccccceeCCcccccC--CcccchhhhhHHHHHHHHHhC
Q 040501 84 PIVHRDISSKNVLLDL-EYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM--KVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 84 ~i~h~di~p~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~l~~~~~g 160 (228)
.|+|||||-+||+++. .|.+||+|||-+++...-.....++.||..|||||++..+ .|..++|||||||++.||.||
T Consensus 695 ~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATG 774 (1226)
T KOG4279|consen 695 KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATG 774 (1226)
T ss_pred ceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccC
Confidence 9999999999999964 6999999999999887666667778999999999998755 588999999999999999999
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++||--.+.. ...++.--.-...|+.+ ...+.+...+|.+|+.++|.+||+++++++
T Consensus 775 rPPF~Elgsp----qAAMFkVGmyKvHP~iP---eelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 775 RPPFVELGSP----QAAMFKVGMYKVHPPIP---EELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CCCeeecCCh----hHhhhhhcceecCCCCc---HHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 9998533221 11122222222223332 355667889999999999999999999985
No 304
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=7e-38 Score=236.13 Aligned_cols=208 Identities=27% Similarity=0.371 Sum_probs=169.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++||||+++++.+..+...++++||+.+++|.+++... ..++...+..++.|++++|.|||+.
T Consensus 45 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~-- 119 (258)
T cd05578 45 RNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSK-- 119 (258)
T ss_pred HHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhC--
Confidence 56788999999999999999999999999999999999999999998765 2388899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++|+|||.+....... ......++..|+|||.+.+..++.++|+||||+++|++++|..
T Consensus 120 -~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~ 197 (258)
T cd05578 120 -GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKR 197 (258)
T ss_pred -CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCC
Confidence 99999999999999999999999999887654332 2234567788999999988888999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCH--HHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM--QTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~--~~il~ 224 (228)
||...... .............. . .....+..+.++|.+||..||.+||++ +++++
T Consensus 198 p~~~~~~~---~~~~~~~~~~~~~~-~---~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 198 PYRGHSRT---IRDQIRAKQETADV-L---YPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred CCCCCCcc---HHHHHHHHhccccc-c---CcccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 98644321 11112222111111 1 112345678999999999999999999 76653
No 305
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1e-37 Score=247.19 Aligned_cols=155 Identities=26% Similarity=0.348 Sum_probs=136.1
Q ss_pred HHHHHHHHhccC-C-----CccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 040501 5 FLREITVLTEIR-H-----RNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLH 78 (228)
Q Consensus 5 ~~~E~~~l~~l~-h-----~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh 78 (228)
...|+.+|..++ | -|+|+++++|...++.|||+|.+. .+|.++++.+.- ..++...+..++.|+++||..||
T Consensus 229 ~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~-~NLYellK~n~f-~Glsl~~ir~~~~Qil~~L~~L~ 306 (586)
T KOG0667|consen 229 AQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLS-TNLYELLKNNKF-RGLSLPLVRKFAQQILTALLFLH 306 (586)
T ss_pred HHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhh-hhHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 356999999996 4 389999999999999999999884 699999987653 34999999999999999999999
Q ss_pred hCCCCCeeecCCCCCceEEcCC--CceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHH
Q 040501 79 HDCIPPIVHRDISSKNVLLDLE--YEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 79 ~~~~~~i~h~di~p~nil~~~~--~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 156 (228)
+. ||+|+||||+|||+... ..+||+|||.+...+.... ....+..|+|||++.|.+|+.+.|||||||++.|
T Consensus 307 ~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy---tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAE 380 (586)
T KOG0667|consen 307 EL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY---TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAE 380 (586)
T ss_pred hC---CeeeccCChhheeeccCCcCceeEEecccccccCCcce---eeeeccccccchhhccCCCCCccceeehhhhHHh
Confidence 99 99999999999999654 4699999999988654432 5667889999999999999999999999999999
Q ss_pred HHhCCCCcccc
Q 040501 157 VIKGKHPRDFL 167 (228)
Q Consensus 157 ~~~g~~p~~~~ 167 (228)
|++|.+.|+..
T Consensus 381 L~tG~PLfpG~ 391 (586)
T KOG0667|consen 381 LFTGEPLFPGD 391 (586)
T ss_pred HhcCccccCCC
Confidence 99999887644
No 306
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=8.9e-37 Score=230.99 Aligned_cols=206 Identities=24% Similarity=0.320 Sum_probs=163.0
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec--CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
+.+.+|++++++++|+||+++++++.+. ..+++++|++++++|.+++.... .++...+..++.|++.+|.+||+.
T Consensus 49 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~ 125 (265)
T cd06652 49 NALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSN 125 (265)
T ss_pred HHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4678899999999999999999988653 56889999999999999987543 278888999999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCC---CceecccccceeCCcccccCCcccchhhhhHHHHHHHH
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS---NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~ 157 (228)
|++|+||+|+||+++.++.++|+|||.+........ ......++..|+|||.+.+..++.++|+||||+++|++
T Consensus 126 ---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el 202 (265)
T cd06652 126 ---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEM 202 (265)
T ss_pred ---CEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHH
Confidence 999999999999999999999999998875432111 12234577889999999888889999999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhc-CCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEML-DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++|..||..... ........ .+..+.. ....+..+.+++.+||. +|++|||++++++
T Consensus 203 ~~g~~p~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 203 LTEKPPWAEFEA------MAAIFKIATQPTNPVL---PPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred hhCCCCCCccch------HHHHHHHhcCCCCCCC---chhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 999999853211 11111111 1111111 12345567899999995 9999999999985
No 307
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=3e-37 Score=232.24 Aligned_cols=209 Identities=24% Similarity=0.333 Sum_probs=172.7
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT-SAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
...+.+|+++++.++|+||+++++++......|+++|++++++|.+++.... ....++...++.++.|++.|+.+||+.
T Consensus 43 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~ 122 (256)
T cd08530 43 REDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ 122 (256)
T ss_pred HHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 3467789999999999999999999999999999999999999999886522 123478899999999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhC
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g 160 (228)
|++|+||+|+||+++.++.++++|||++...... ......++..|+|||.+.+..++.++|+||||+++|++++|
T Consensus 123 ---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g 197 (256)
T cd08530 123 ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN--MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATF 197 (256)
T ss_pred ---CcccCCCCcceEEEecCCcEEEeeccchhhhccC--CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhC
Confidence 9999999999999999999999999998776544 22234577899999999888889999999999999999999
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+.||.... .............+... ...+.++.+++.+||..+|.+|||+.++++
T Consensus 198 ~~p~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 198 APPFEARS------MQDLRYKVQRGKYPPIP---PIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CCCCCCCC------HHHHHHHHhcCCCCCCc---hhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 99975332 22222333333333322 245667999999999999999999999986
No 308
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=8.3e-37 Score=229.54 Aligned_cols=207 Identities=26% Similarity=0.465 Sum_probs=171.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+|++++++++..+...++++|++.+++|.+++... ..+++..++.++.|++.++.+||+.
T Consensus 44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~-- 118 (254)
T cd06627 44 KSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQ-- 118 (254)
T ss_pred HHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhC--
Confidence 56889999999999999999999999999999999999999999998765 2389999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++.++.++|+|||.+..............++..|+|||...+...+.++|+|++|+++|++++|..
T Consensus 119 -~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~ 197 (254)
T cd06627 119 -GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNP 197 (254)
T ss_pred -CcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999877654443344567889999999888778899999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||..... ............+... ...+..+.+++.+||..+|++|||+.+++.
T Consensus 198 p~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 198 PYYDLNP------MAALFRIVQDDHPPLP---EGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCccH------HHHHHHHhccCCCCCC---CCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 9753321 1111122112222111 234567899999999999999999999875
No 309
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.5e-37 Score=238.99 Aligned_cols=212 Identities=26% Similarity=0.321 Sum_probs=161.3
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeec--CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+|+.++++++|+||+++++++... ...++|+|++.+ +|.+++.... ..+++.+++.++.|++.||.|||+.
T Consensus 52 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~- 127 (309)
T cd07845 52 SSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHEN- 127 (309)
T ss_pred hhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 356899999999999999999998754 568999999965 7877776533 3488999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHHHHHHhC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~~~~g 160 (228)
|++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+.+ ..++.++|+||||+++|+|++|
T Consensus 128 --~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g 205 (309)
T cd07845 128 --FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAH 205 (309)
T ss_pred --CeecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999998876544333333345678999998865 4578899999999999999999
Q ss_pred CCCccccccccCCCchhhhhhhc-----------------------CCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC
Q 040501 161 KHPRDFLSNVSSSNPNILVNEML-----------------------DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP 217 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 217 (228)
..||......... ....... ..............+.++.++|.+||+.||++||
T Consensus 206 ~~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~ 282 (309)
T cd07845 206 KPLLPGKSEIEQL---DLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRA 282 (309)
T ss_pred CCCCCCCCHHHHH---HHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCc
Confidence 9998643221100 0000000 0000000001122456788999999999999999
Q ss_pred CHHHHHH
Q 040501 218 NMQTICQ 224 (228)
Q Consensus 218 t~~~il~ 224 (228)
|+.++++
T Consensus 283 t~~~il~ 289 (309)
T cd07845 283 TAEEALE 289 (309)
T ss_pred CHHHHhc
Confidence 9999875
No 310
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=8.8e-37 Score=231.93 Aligned_cols=214 Identities=23% Similarity=0.388 Sum_probs=165.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecC------eEEEEEEeecCCChhhhhhcCC---CCCCCCHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDT---SAEELGWSRRINVIKGIAHA 73 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~~l~~~ 73 (228)
+++.+|++++++++||||+++++++.... ..+++++|+.+++|.+++.... ....++...++.++.|++.|
T Consensus 46 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~ 125 (273)
T cd05074 46 EEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASG 125 (273)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999886432 3478899999999988764321 12237888999999999999
Q ss_pred HHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHH
Q 040501 74 LSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFG 151 (228)
Q Consensus 74 l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG 151 (228)
++|||+. |++|+||||+||+++.++.++++|||.+......... .....+++.|++||.+.+..++.++||||||
T Consensus 126 l~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG 202 (273)
T cd05074 126 MEYLSSK---NFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFG 202 (273)
T ss_pred HHHHHhC---CEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHH
Confidence 9999999 9999999999999999999999999998765432211 1223445789999999888889999999999
Q ss_pred HHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 152 VLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 152 ~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
+++|++++ |..||..... ......+......... ...+..+.+++.+||+.+|.+|||+.++++.|++
T Consensus 203 ~il~el~~~g~~p~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 203 VTMWEIMTRGQTPYAGVEN------SEIYNYLIKGNRLKQP---PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred HHHHHHhhCCCCCCCCCCH------HHHHHHHHcCCcCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 99999998 8888753321 1122222222111111 2345678999999999999999999999999874
No 311
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.2e-36 Score=234.99 Aligned_cols=204 Identities=26% Similarity=0.435 Sum_probs=162.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++||||+++.+++..+...|+|+||+.+ ++.+.+.... ..+++..+..++.|++.||.|||+.
T Consensus 60 ~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~-- 134 (307)
T cd06607 60 QDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCLG-SASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSH-- 134 (307)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhCC-CHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 4678999999999999999999999999999999999974 6666665332 2388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccc---cCCcccchhhhhHHHHHHHHHh
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAY---TMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~~~~~ 159 (228)
|++|+||+|+||+++.++.++|+|||.+...... ....++..|+|||.+. ...++.++||||||+++|+|++
T Consensus 135 -~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~t 209 (307)
T cd06607 135 -ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 209 (307)
T ss_pred -CceecCCCcccEEECCCCCEEEeecCcceecCCC----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHc
Confidence 9999999999999999999999999988764422 2345678899999874 3457889999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|..||..... ............+... ....+..+.+++.+||..+|.+|||+.+++.
T Consensus 210 g~~p~~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 210 RKPPLFNMNA------MSALYHIAQNDSPTLS--SNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred CCCCCCCccH------HHHHHHHhcCCCCCCC--chhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 9999753321 1111112111111111 1235567899999999999999999999976
No 312
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.2e-36 Score=236.96 Aligned_cols=212 Identities=20% Similarity=0.314 Sum_probs=162.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+.+++.++||||++++++|..+...++++|++.++++.+++..... ..+++..+..++.|++.||+|||+.
T Consensus 44 ~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~-- 120 (328)
T cd08226 44 KALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQN-- 120 (328)
T ss_pred HHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 5678899999999999999999999999999999999999999999876432 2488899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc-------eecccccceeCCcccccC--CcccchhhhhHHHH
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW-------TEFAGTYGYVAPELAYTM--KVTAKCDVYSFGVL 153 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~ 153 (228)
|++|+||||+||+++.++.++++||+.+.......... ....++..|+|||++.+. .++.++|+||+||+
T Consensus 121 -~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~ 199 (328)
T cd08226 121 -GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGIT 199 (328)
T ss_pred -CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHH
Confidence 99999999999999999999999997543322111110 011235569999998764 46889999999999
Q ss_pred HHHHHhCCCCccccccccCCCchhhhhhhcCC----------------------------------------CC---CCC
Q 040501 154 ALEVIKGKHPRDFLSNVSSSNPNILVNEMLDP----------------------------------------RL---PPL 190 (228)
Q Consensus 154 l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~---~~~ 190 (228)
+|++++|..||....... ........ .. ...
T Consensus 200 l~el~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (328)
T cd08226 200 ACELATGRVPFQDMLRTQ------MLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLR 273 (328)
T ss_pred HHHHHhCCCCCCCcChHH------HHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhcccccccccccccc
Confidence 999999999986432110 00000000 00 000
Q ss_pred chhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 191 SVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 191 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.......+..+.+++++||..||.+|||++++++
T Consensus 274 ~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 274 TPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred chhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 1112345677899999999999999999999975
No 313
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.2e-36 Score=229.19 Aligned_cols=209 Identities=28% Similarity=0.428 Sum_probs=172.4
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeec--CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH 79 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 79 (228)
.+.+.+|++.+++++|+||+++++.+... ...++++|++.+++|.+++.... .+++..++.++.|++.++.+||+
T Consensus 43 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~ 119 (260)
T cd06606 43 LEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHS 119 (260)
T ss_pred HHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH
Confidence 35688999999999999999999999888 89999999999999999987654 48999999999999999999999
Q ss_pred CCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCC--CceecccccceeCCcccccCCcccchhhhhHHHHHHHH
Q 040501 80 DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS--NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 80 ~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~ 157 (228)
. |++|+||+|+||+++.++.++|+|||.+........ ......++..|+|||.+.+...+.++|+||||+++|++
T Consensus 120 ~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l 196 (260)
T cd06606 120 N---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEM 196 (260)
T ss_pred C---CccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHH
Confidence 9 999999999999999999999999999887664432 13345678899999999888899999999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcC-CCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLD-PRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++|..||.... +.......... ...+..+ ...+..+.+++.+||..||.+|||+.+++.
T Consensus 197 ~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 197 ATGKPPWSELG-----NPMAALYKIGSSGEPPEIP---EHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred HhCCCCCCCCC-----chHHHHHhccccCCCcCCC---cccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 99999986443 11122222221 1111111 233567999999999999999999999985
No 314
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=3.9e-37 Score=234.91 Aligned_cols=216 Identities=22% Similarity=0.322 Sum_probs=168.0
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++++..+...++++||+.+ ++.+.+.... ..++..+++.++.|++.||.+||+.
T Consensus 43 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~-- 117 (283)
T cd05118 43 KTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSH-- 117 (283)
T ss_pred HHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 4678899999999999999999999999999999999975 7777776543 3489999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+.+. .++.++|+||||+++|++++|+
T Consensus 118 -~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~ 196 (283)
T cd05118 118 -GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRR 196 (283)
T ss_pred -CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999987765443222334567789999998776 6788999999999999999999
Q ss_pred CCccccccccCCCc---------hhhhh-----------hhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHH
Q 040501 162 HPRDFLSNVSSSNP---------NILVN-----------EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQT 221 (228)
Q Consensus 162 ~p~~~~~~~~~~~~---------~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 221 (228)
.||........... ..... .................+.++.++|.+||++||.+||++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ 276 (283)
T cd05118 197 PLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQ 276 (283)
T ss_pred CCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHH
Confidence 99864332110000 00000 00000111111122346778999999999999999999999
Q ss_pred HHH
Q 040501 222 ICQ 224 (228)
Q Consensus 222 il~ 224 (228)
++.
T Consensus 277 ll~ 279 (283)
T cd05118 277 ALA 279 (283)
T ss_pred Hhh
Confidence 985
No 315
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=4.3e-37 Score=236.17 Aligned_cols=218 Identities=18% Similarity=0.244 Sum_probs=162.1
Q ss_pred HHHHHHHHHHhccC-CCccceeeeeeeecCe-----EEEEEEeecCCChhhhhhcCCC--CCCCCHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIR-HRNIVKFYGFCTHARH-----SFLVYEYLENGSLSVILNNDTS--AEELGWSRRINVIKGIAHAL 74 (228)
Q Consensus 3 ~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~-----~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l 74 (228)
+.+.+|+.++++++ |+||+++++++..... .|++|||+.+ +|.+++..... ...+++..++.++.|++.||
T Consensus 45 ~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L 123 (295)
T cd07837 45 PTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGV 123 (295)
T ss_pred hHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHH
Confidence 46788999999995 6999999999876655 8999999986 78777754322 23579999999999999999
Q ss_pred HHhhhCCCCCeeecCCCCCceEEcC-CCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHH
Q 040501 75 SYLHHDCIPPIVHRDISSKNVLLDL-EYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGV 152 (228)
Q Consensus 75 ~~lh~~~~~~i~h~di~p~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~ 152 (228)
.|||+. |++|+||+|+||+++. ++.++|+|||.+..............+++.|+|||.+.+ ..++.++|+||||+
T Consensus 124 ~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ 200 (295)
T cd07837 124 AHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGC 200 (295)
T ss_pred HHHHHC---CeeecCCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHH
Confidence 999999 9999999999999998 889999999998765433333333456778999998765 34688999999999
Q ss_pred HHHHHHhCCCCccccccccCCC---------chhhhh---------hhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCC
Q 040501 153 LALEVIKGKHPRDFLSNVSSSN---------PNILVN---------EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPE 214 (228)
Q Consensus 153 ~l~~~~~g~~p~~~~~~~~~~~---------~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 214 (228)
++|+|++|..||.......... ...... .................+..+.++|.+||..||.
T Consensus 201 ~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~ 280 (295)
T cd07837 201 IFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPA 280 (295)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChh
Confidence 9999999999986432211000 000000 0000000000111124566789999999999999
Q ss_pred CCCCHHHHHH
Q 040501 215 SRPNMQTICQ 224 (228)
Q Consensus 215 ~Rpt~~~il~ 224 (228)
+|||+.+++.
T Consensus 281 ~R~~~~eil~ 290 (295)
T cd07837 281 KRISAKAALT 290 (295)
T ss_pred hcCCHHHHhc
Confidence 9999999875
No 316
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=8.5e-37 Score=234.44 Aligned_cols=217 Identities=22% Similarity=0.308 Sum_probs=162.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|++++++++|+||+++++++..+...|+|+||+++ +|.+.+..... ..++...+..++.|++.||+|||+.
T Consensus 46 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~-- 121 (294)
T PLN00009 46 STAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSH-- 121 (294)
T ss_pred HHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhC--
Confidence 4578899999999999999999999999999999999964 77777654332 2367888889999999999999999
Q ss_pred CCeeecCCCCCceEEcC-CCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHhC
Q 040501 83 PPIVHRDISSKNVLLDL-EYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~g 160 (228)
|++|+||+|+||+++. ++.+||+|||++..............+++.|+|||.+.+. .++.++|+||+|+++|++++|
T Consensus 122 -~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg 200 (294)
T PLN00009 122 -RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQ 200 (294)
T ss_pred -CeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 9999999999999985 4678999999997654433333334567889999988664 478899999999999999999
Q ss_pred CCCccccccccCCCch--------hhh-------h--hhcCCCCCC--CchhhhhhHHHHHHHHHHhhccCCCCCCCHHH
Q 040501 161 KHPRDFLSNVSSSNPN--------ILV-------N--EMLDPRLPP--LSVDIRGKVISIMEVAFLCLDNNPESRPNMQT 221 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~--------~~~-------~--~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 221 (228)
..||............ ... . ....+.... ........+..+.+++.+||+.+|.+||++.+
T Consensus 201 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~ 280 (294)
T PLN00009 201 KPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARA 280 (294)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHH
Confidence 9998643221100000 000 0 000000000 01112345567889999999999999999999
Q ss_pred HHH
Q 040501 222 ICQ 224 (228)
Q Consensus 222 il~ 224 (228)
+++
T Consensus 281 ~l~ 283 (294)
T PLN00009 281 ALE 283 (294)
T ss_pred Hhc
Confidence 875
No 317
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-39 Score=269.07 Aligned_cols=208 Identities=28% Similarity=0.424 Sum_probs=170.8
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+.+|..++..++|||+|+++++=.+.+..+|.||||.+|+|.+.+..... .++.....+..|++.|++|||+.
T Consensus 1280 ~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri---~dE~vt~vyt~qll~gla~LH~~--- 1353 (1509)
T KOG4645|consen 1280 LIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRI---EDEMVTRVYTKQLLEGLAYLHEH--- 1353 (1509)
T ss_pred chHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcch---hhhhHHHHHHHHHHHHHHHHHhc---
Confidence 467899999999999999999999999999999999999999999976543 45555567889999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCC----ceecccccceeCCcccccCC---cccchhhhhHHHHHHH
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN----WTEFAGTYGYVAPELAYTMK---VTAKCDVYSFGVLALE 156 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~---~~~~~DiwslG~~l~~ 156 (228)
|||||||||.||+++.+|.+|++|||.+..+..+... .....||+.|||||++.+.. ...++|||||||+..|
T Consensus 1354 gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlE 1433 (1509)
T KOG4645|consen 1354 GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLE 1433 (1509)
T ss_pred CceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEE
Confidence 9999999999999999999999999999887655322 23467999999999998764 4568999999999999
Q ss_pred HHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 157 VIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
|+||+.||...+. .-.....+..+..|..+. ..+.+-.+++..||..||++|-++.++++.
T Consensus 1434 M~tGkrPW~~~dn-----e~aIMy~V~~gh~Pq~P~---~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1434 MATGKRPWAELDN-----EWAIMYHVAAGHKPQIPE---RLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred eecCCCchhhccc-----hhHHHhHHhccCCCCCch---hhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 9999999864332 112233333333333332 366678899999999999999999988863
No 318
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=5.3e-37 Score=239.77 Aligned_cols=216 Identities=21% Similarity=0.308 Sum_probs=162.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec-----CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA-----RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYL 77 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 77 (228)
+.+.+|+.+++.++|+||+++++++... ...|+++||+. ++|.+++.... .++...+..++.|++.||.+|
T Consensus 49 ~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~L 124 (337)
T cd07858 49 KRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSSQ---TLSDDHCQYFLYQLLRGLKYI 124 (337)
T ss_pred HHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999988644 35799999996 57888776543 388999999999999999999
Q ss_pred hhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHHHH
Q 040501 78 HHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 78 h~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~ 156 (228)
|+. +++|+||+|+||+++.++.++|+|||++..............++..|+|||.+.. ..++.++|+||||+++|+
T Consensus 125 H~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 201 (337)
T cd07858 125 HSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAE 201 (337)
T ss_pred HhC---CEecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHH
Confidence 999 9999999999999999999999999998765433222334457788999998765 458899999999999999
Q ss_pred HHhCCCCccccccccC---------------------CCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCC
Q 040501 157 VIKGKHPRDFLSNVSS---------------------SNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPES 215 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 215 (228)
|++|..||........ ...............+.........+.++.++|.+||+.+|.+
T Consensus 202 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 281 (337)
T cd07858 202 LLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSK 281 (337)
T ss_pred HHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhh
Confidence 9999999864321000 0000000000000001111112345677899999999999999
Q ss_pred CCCHHHHHHH
Q 040501 216 RPNMQTICQL 225 (228)
Q Consensus 216 Rpt~~~il~~ 225 (228)
|||++++++.
T Consensus 282 Rps~~ell~h 291 (337)
T cd07858 282 RITVEEALAH 291 (337)
T ss_pred ccCHHHHHcC
Confidence 9999998863
No 319
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3.8e-36 Score=233.15 Aligned_cols=205 Identities=26% Similarity=0.427 Sum_probs=162.9
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+|++++++++..+...|+|+||+.+ ++.+.+.... ..+++.++..++.|++.++.+||+.
T Consensus 70 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~-- 144 (317)
T cd06635 70 QDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH-- 144 (317)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 3578899999999999999999999999999999999975 6666665432 2388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccc---cCCcccchhhhhHHHHHHHHHh
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAY---TMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~~~~~ 159 (228)
|++|+||+|+||+++.++.++|+|||++...... ....++..|+|||.+. ...++.++|+||+|+++|+|++
T Consensus 145 -~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~ 219 (317)
T cd06635 145 -NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 219 (317)
T ss_pred -CcccCCCCcccEEECCCCCEEEecCCCccccCCc----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHh
Confidence 9999999999999999999999999988654322 2345778899999874 3457889999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
|..||... ........+.....+... ....+..+.+++.+||+.+|.+|||+.++++.
T Consensus 220 g~~p~~~~------~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 220 RKPPLFNM------NAMSALYHIAQNESPTLQ--SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred CCCCCCCc------cHHHHHHHHHhccCCCCC--CccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence 99997532 111222222222221111 12345578999999999999999999999874
No 320
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=5.2e-37 Score=239.26 Aligned_cols=215 Identities=25% Similarity=0.372 Sum_probs=166.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecC-----eEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR-----HSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYL 77 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 77 (228)
+.+.+|+.+++.++|+||+++.+++.... ..|+++||+. ++|.+++.... .+++..++.++.|++.||++|
T Consensus 44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~L 119 (330)
T cd07834 44 KRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYL 119 (330)
T ss_pred hhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHH
Confidence 56889999999999999999999987764 7899999997 47888876543 489999999999999999999
Q ss_pred hhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCC---CceecccccceeCCcccccC-CcccchhhhhHHHH
Q 040501 78 HHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS---NWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVL 153 (228)
Q Consensus 78 h~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~ 153 (228)
|+. |++|+||||+||+++.++.++|+|||.+........ ......++..|+|||.+.+. .++.++|+||+|++
T Consensus 120 H~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~i 196 (330)
T cd07834 120 HSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCI 196 (330)
T ss_pred HhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHH
Confidence 999 999999999999999999999999999987655431 22334567889999999887 78999999999999
Q ss_pred HHHHHhCCCCccccccccCCC---------chh--------hhhhhcC----CCCCCCchhhhhhHHHHHHHHHHhhccC
Q 040501 154 ALEVIKGKHPRDFLSNVSSSN---------PNI--------LVNEMLD----PRLPPLSVDIRGKVISIMEVAFLCLDNN 212 (228)
Q Consensus 154 l~~~~~g~~p~~~~~~~~~~~---------~~~--------~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~ 212 (228)
+|+|++|.+||.......... ... ....... ...........+.+..+.++|.+||+.+
T Consensus 197 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 276 (330)
T cd07834 197 FAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFD 276 (330)
T ss_pred HHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCC
Confidence 999999999986433211000 000 0000000 0000001111235667899999999999
Q ss_pred CCCCCCHHHHHH
Q 040501 213 PESRPNMQTICQ 224 (228)
Q Consensus 213 p~~Rpt~~~il~ 224 (228)
|.+|||+.++++
T Consensus 277 P~~Rpt~~~ll~ 288 (330)
T cd07834 277 PKKRITADEALA 288 (330)
T ss_pred hhhCCCHHHHHh
Confidence 999999999986
No 321
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-37 Score=244.25 Aligned_cols=199 Identities=24% Similarity=0.308 Sum_probs=164.6
Q ss_pred HHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 5 FLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 5 ~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
-.+|+.++... .||||+++.+.+.++...|+|||.+.|+-+.+.+..... .. ..+..|+++++.|+.|||++
T Consensus 362 ~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~---~~-~e~~~w~~~lv~Av~~LH~~--- 434 (612)
T KOG0603|consen 362 NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPE---FC-SEASQWAAELVSAVDYLHEQ--- 434 (612)
T ss_pred cccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcch---hH-HHHHHHHHHHHHHHHHHHhc---
Confidence 45677777777 699999999999999999999999999888887765442 22 77788999999999999999
Q ss_pred CeeecCCCCCceEE-cCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 84 PIVHRDISSKNVLL-DLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 84 ~i~h~di~p~nil~-~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|||+||+|||+ +..|.++|+|||.+...... ...+.-|..|.|||++....++.++|+||||+++|+|++|+.
T Consensus 435 gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~t 511 (612)
T KOG0603|consen 435 GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRT 511 (612)
T ss_pred CeeecCCChhheeecCCCCcEEEEEechhhhCchh---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCC
Confidence 99999999999999 68899999999998865543 334566788999999999899999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||..-... .+...++..+... ...+.+..+|+.+||+.||.+||++.++..
T Consensus 512 p~~~~P~~-----~ei~~~i~~~~~s------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 512 LFAAHPAG-----IEIHTRIQMPKFS------ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ccccCCch-----HHHHHhhcCCccc------cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 98643222 3334444333322 466778899999999999999999999864
No 322
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=9.6e-37 Score=233.48 Aligned_cols=214 Identities=25% Similarity=0.357 Sum_probs=163.3
Q ss_pred hHHHHHHHHHHhccC-CCccceeeeeeeecCeEEEEEEeecCCChhhhhhc--CCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 040501 2 KKEFLREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNN--DTSAEELGWSRRINVIKGIAHALSYLH 78 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~lh 78 (228)
+..+.+|+.++.++. |+||+++++++......+++||++.. ++.++... ......+++..+..++.+++.|++|||
T Consensus 46 ~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh 124 (288)
T cd06616 46 QKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLK 124 (288)
T ss_pred HHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 356788999999995 99999999999988899999999864 55443321 111234889999999999999999999
Q ss_pred hCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC---CcccchhhhhHHHHHH
Q 040501 79 HDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM---KVTAKCDVYSFGVLAL 155 (228)
Q Consensus 79 ~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DiwslG~~l~ 155 (228)
+.. +++||||+|+||+++.++.++|+|||++........ .....++..|+|||.+.+. .++.++|+||+|+++|
T Consensus 125 ~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~ 201 (288)
T cd06616 125 EEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA-KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLY 201 (288)
T ss_pred hcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccCCc-cccccCccCccCHHHhccccccCCcchhhhhHHHHHHH
Confidence 732 999999999999999999999999999876543221 2234577889999998766 5888999999999999
Q ss_pred HHHhCCCCccccccccCCCchhhhhhhcCCCCCCCc-hhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 156 EVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLS-VDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++++|..||.... .......+......+... .....++.++.+++.+||+.+|.+|||+.++++
T Consensus 202 el~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 202 EVATGKFPYPKWN-----SVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred HHHhCCCCchhcc-----hHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 9999999986432 111222222222221111 111346678999999999999999999999886
No 323
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.1e-36 Score=232.10 Aligned_cols=205 Identities=19% Similarity=0.175 Sum_probs=159.2
Q ss_pred HHHHHHHHhc---cCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 5 FLREITVLTE---IRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 5 ~~~E~~~l~~---l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+|..+++. ..|++|+++.+++...+..++||||+.+++|.+++..+. .+++..+..++.|++.||.|||+.
T Consensus 41 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~- 116 (279)
T cd05633 41 ALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNR- 116 (279)
T ss_pred HHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 3445444444 369999999999998899999999999999999887543 389999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccc-cCCcccchhhhhHHHHHHHHHhC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DiwslG~~l~~~~~g 160 (228)
|++|+||||+||+++.++.++++|||++....... .....++..|+|||.+. +..++.++|+||+|+++|++++|
T Consensus 117 --~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g 192 (279)
T cd05633 117 --FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRG 192 (279)
T ss_pred --CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhC
Confidence 99999999999999999999999999886543222 22346788999999876 45578999999999999999999
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP-----NMQTICQ 224 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~il~ 224 (228)
..||....... . ............. .....+.++.++|.+||+.||.+|| |++++++
T Consensus 193 ~~pf~~~~~~~---~-~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 193 HSPFRQHKTKD---K-HEIDRMTLTVNVE---LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred CCCcCCCCCcC---H-HHHHHHhhcCCcC---CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 99986432111 1 1111111111111 1123566789999999999999999 5888876
No 324
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3e-36 Score=232.80 Aligned_cols=205 Identities=26% Similarity=0.433 Sum_probs=162.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+++.+|+++++.++|+|++++.+++......|+|+||+. +++.+.+.... ..++..++..++.|++.++.|||+.
T Consensus 60 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~-- 134 (308)
T cd06634 60 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH-- 134 (308)
T ss_pred HHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 357789999999999999999999999999999999996 47777665433 2378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccc---cCCcccchhhhhHHHHHHHHHh
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAY---TMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~~~~~ 159 (228)
+++|+||+|+||+++.++.++++|||++...... ....++..|+|||.+. ...++.++||||||+++|++++
T Consensus 135 -~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~ 209 (308)
T cd06634 135 -NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 209 (308)
T ss_pred -CcccCCCCHHhEEECCCCcEEECCcccceeecCc----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHc
Confidence 9999999999999999999999999988764422 2245678899999874 3457889999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
|..||.... .............+... ....+..+.++|.+||..+|.+||++.++++.
T Consensus 210 g~~p~~~~~------~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 210 RKPPLFNMN------AMSALYHIAQNESPALQ--SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred CCCCCcccc------HHHHHHHHhhcCCCCcC--cccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 999975321 11122222222222111 12455678999999999999999999999863
No 325
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-38 Score=244.44 Aligned_cols=219 Identities=24% Similarity=0.410 Sum_probs=175.2
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
|.+|.+|+++|.+|+||||+.+++.|..++.+++++||+..|+|..++..+.... ..-.....++.||++|++||.+.
T Consensus 579 r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~- 656 (807)
T KOG1094|consen 579 RNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESL- 656 (807)
T ss_pred HHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhh-
Confidence 6789999999999999999999999999999999999999999999998775432 45556677999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc--eecccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW--TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
+++|||+.+.|++++.++++||+|||.++......... .....+.+|+|||.+.-.+++++||+|++|+++||+++
T Consensus 657 --nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~ 734 (807)
T KOG1094|consen 657 --NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFM 734 (807)
T ss_pred --chhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHH
Confidence 99999999999999999999999999998654333322 22345789999999999999999999999999999864
Q ss_pred --CCCCccccccccCCCchhhhhhhcCCCC-CCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 160 --GKHPRDFLSNVSSSNPNILVNEMLDPRL-PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 160 --g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
...||........ .+......+... ........-++..+++++.+||+.+..+|||++++...|+
T Consensus 735 ~C~e~Py~~lt~e~v---ven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq 802 (807)
T KOG1094|consen 735 LCREQPYSQLTDEQV---VENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQ 802 (807)
T ss_pred HHhhCchhhhhHHHH---HHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHH
Confidence 7778754432211 111112222111 1111223456778999999999999999999999988876
No 326
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.2e-36 Score=229.70 Aligned_cols=208 Identities=22% Similarity=0.323 Sum_probs=168.8
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND-TSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
.+.+|+.+++.++||||+++++++.+....++++||+++++|.+++... .....+++..++.++.|++.|+.+||+.
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-- 125 (260)
T cd08222 48 QANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR-- 125 (260)
T ss_pred HHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc--
Confidence 4667999999999999999999999889999999999999999988642 2234589999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
|++|+||+|+||+++. +.++++|||.+..............+++.|+|||...+..++.++|+||+|+++|++++|..
T Consensus 126 -~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~ 203 (260)
T cd08222 126 -RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAH 203 (260)
T ss_pred -CccccCCChhheEeec-CCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999999999975 57999999988766544333344567888999999888788889999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||.... .............+.. ....+.++.++|.+||..+|.+||++.++++
T Consensus 204 ~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 204 AFEGQN------FLSVVLRIVEGPTPSL---PETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred CCCCcc------HHHHHHHHHcCCCCCC---cchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 975221 1222223322222222 1355668899999999999999999999985
No 327
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.6e-36 Score=236.92 Aligned_cols=212 Identities=22% Similarity=0.279 Sum_probs=162.1
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+.+|++++++++|+||+++++++......+++||++. ++|.+++.... .++...+..++.|++.||.+||+.
T Consensus 66 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~--- 138 (335)
T PTZ00024 66 TTLRELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKI---RLTESQVKCILLQILNGLNVLHKW--- 138 (335)
T ss_pred hHHHHHHHHHhCCCcceeeeeEEEecCCcEEEEEeccc-cCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 47789999999999999999999999999999999997 58888876433 388899999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCC--------------CCCceecccccceeCCcccccC-Ccccchhhh
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD--------------SSNWTEFAGTYGYVAPELAYTM-KVTAKCDVY 148 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Diw 148 (228)
|++|+||+|+||+++.++.++++|||.+...... ........++..|+|||.+.+. .++.++|+|
T Consensus 139 ~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 218 (335)
T PTZ00024 139 YFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMW 218 (335)
T ss_pred CeecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHH
Confidence 9999999999999999999999999998765411 1112223457789999988764 368899999
Q ss_pred hHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCC--------------------CCCCCchhhhhhHHHHHHHHHHh
Q 040501 149 SFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDP--------------------RLPPLSVDIRGKVISIMEVAFLC 208 (228)
Q Consensus 149 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~li~~~ 208 (228)
|||+++|+|++|..||......... .........+ ............+..+.+++.+|
T Consensus 219 slG~~l~el~tg~~p~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 296 (335)
T PTZ00024 219 SVGCIFAELLTGKPLFPGENEIDQL--GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSL 296 (335)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHH
Confidence 9999999999999998643321100 0000000000 00000011123456788999999
Q ss_pred hccCCCCCCCHHHHHH
Q 040501 209 LDNNPESRPNMQTICQ 224 (228)
Q Consensus 209 l~~~p~~Rpt~~~il~ 224 (228)
|+.+|.+|||+++++.
T Consensus 297 l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 297 LKLNPLERISAKEALK 312 (335)
T ss_pred cCCCchhccCHHHHhc
Confidence 9999999999999985
No 328
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.4e-36 Score=237.50 Aligned_cols=212 Identities=23% Similarity=0.360 Sum_probs=160.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec------CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA------RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (228)
+.+.+|+.++++++|+||++++++|... ...|+|+||+.+ +|.+.+... ++...+..++.|++.||++
T Consensus 60 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~ 133 (353)
T cd07850 60 KRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMD-----LDHERMSYLLYQMLCGIKH 133 (353)
T ss_pred HHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccCC-CHHHHHhhc-----CCHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999988643 357999999965 777766432 7888899999999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 156 (228)
||+. |++|+||||+||+++.++.++|+|||.+....... ......++..|+|||.+.+..++.++||||||+++|+
T Consensus 134 LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~ 209 (353)
T cd07850 134 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 209 (353)
T ss_pred HHhC---CeeeCCCCHHHEEECCCCCEEEccCccceeCCCCC-CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHH
Confidence 9999 99999999999999999999999999997654322 2233456788999999998889999999999999999
Q ss_pred HHhCCCCccccccccC---------CCchhh-------hhhhcCCCC----------------CC-CchhhhhhHHHHHH
Q 040501 157 VIKGKHPRDFLSNVSS---------SNPNIL-------VNEMLDPRL----------------PP-LSVDIRGKVISIME 203 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~---------~~~~~~-------~~~~~~~~~----------------~~-~~~~~~~~~~~~~~ 203 (228)
|++|..||...+.... ...... ......... +. ........+..+.+
T Consensus 210 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (353)
T cd07850 210 MIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARD 289 (353)
T ss_pred HHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHH
Confidence 9999999864321100 000000 000000000 00 00001234556889
Q ss_pred HHHHhhccCCCCCCCHHHHHH
Q 040501 204 VAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 204 li~~~l~~~p~~Rpt~~~il~ 224 (228)
+|.+||+.||++|||+.++++
T Consensus 290 li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 290 LLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HHHHHcCCChhhCcCHHHHhc
Confidence 999999999999999999985
No 329
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2.2e-36 Score=229.08 Aligned_cols=193 Identities=25% Similarity=0.383 Sum_probs=156.7
Q ss_pred CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeecCCCCCce
Q 040501 16 RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV 95 (228)
Q Consensus 16 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~di~p~ni 95 (228)
+|+||+++++.|......|+||||+++++|.+++.... .+++..+..++.|+++||.+||+. |++|+||+|+||
T Consensus 67 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~ni 140 (267)
T PHA03390 67 DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENV 140 (267)
T ss_pred cCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHE
Confidence 69999999999999999999999999999999997654 489999999999999999999999 999999999999
Q ss_pred EEcCCC-ceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCC
Q 040501 96 LLDLEY-EAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSN 174 (228)
Q Consensus 96 l~~~~~-~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~ 174 (228)
+++.++ .++++|||.+....... ...++..|+|||++.+..++.++|+||+|+++|+|++|..||....... ..
T Consensus 141 l~~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~ 215 (267)
T PHA03390 141 LYDRAKDRIYLCDYGLCKIIGTPS----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LD 215 (267)
T ss_pred EEeCCCCeEEEecCccceecCCCc----cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hh
Confidence 999998 99999999887654322 2357789999999988889999999999999999999999986332111 11
Q ss_pred chhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCC-HHHHHH
Q 040501 175 PNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPN-MQTICQ 224 (228)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt-~~~il~ 224 (228)
........ .... ......+..+.++|.+||+.+|.+||+ ++++++
T Consensus 216 ~~~~~~~~-~~~~----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 216 LESLLKRQ-QKKL----PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHHHhh-cccC----CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 11111111 1111 112256667899999999999999996 588874
No 330
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.6e-36 Score=233.10 Aligned_cols=218 Identities=19% Similarity=0.278 Sum_probs=161.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec--CeEEEEEEeecCCChhhhhhcCC--CCCCCCHHHHHHHHHHHHHHHHHhh
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDT--SAEELGWSRRINVIKGIAHALSYLH 78 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh 78 (228)
+.+.+|+.+++.++||||+++++++... ...++|+|++.+ ++.+.+.... ....++...++.++.|++.||.|||
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH 125 (316)
T cd07842 47 QSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH 125 (316)
T ss_pred HHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999887 789999999975 6666654322 1225889999999999999999999
Q ss_pred hCCCCCeeecCCCCCceEEcC----CCceEEeecccccccCCCCC---CceecccccceeCCcccccC-CcccchhhhhH
Q 040501 79 HDCIPPIVHRDISSKNVLLDL----EYEAHVSDFGIAKFIQPDSS---NWTEFAGTYGYVAPELAYTM-KVTAKCDVYSF 150 (228)
Q Consensus 79 ~~~~~~i~h~di~p~nil~~~----~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~Diwsl 150 (228)
+. +++|+||+|+||+++. ++.++|+|||++........ ......++..|+|||.+.+. .++.++|+|||
T Consensus 126 ~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~sl 202 (316)
T cd07842 126 SN---WVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAI 202 (316)
T ss_pred hC---CEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHH
Confidence 99 9999999999999999 89999999999886543322 12234567889999987664 47889999999
Q ss_pred HHHHHHHHhCCCCccccccccCCCc-------hhhhh------------------------hhcCCCCCCCch-h----h
Q 040501 151 GVLALEVIKGKHPRDFLSNVSSSNP-------NILVN------------------------EMLDPRLPPLSV-D----I 194 (228)
Q Consensus 151 G~~l~~~~~g~~p~~~~~~~~~~~~-------~~~~~------------------------~~~~~~~~~~~~-~----~ 194 (228)
|+++|+|++|..||........... ..... .......+.... . .
T Consensus 203 G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (316)
T cd07842 203 GCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKH 282 (316)
T ss_pred HHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhc
Confidence 9999999999999864432210000 00000 000000000000 0 0
Q ss_pred hhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 195 RGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 195 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
...+..+.+++.+||+.||++|||+.++++
T Consensus 283 ~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 283 KKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred cCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 033456889999999999999999999975
No 331
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.6e-36 Score=232.33 Aligned_cols=213 Identities=23% Similarity=0.307 Sum_probs=167.3
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+.+|+++++++ +|++|+++.+.+..+...|+|+||+.+++|.+++.... .+++..+..++.|++.+|.+||+.
T Consensus 49 ~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~- 124 (288)
T cd05583 49 EHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLHQL- 124 (288)
T ss_pred HHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHHHC-
Confidence 4577899999999 59999999999999999999999999999999886532 378899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCC--cccchhhhhHHHHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMK--VTAKCDVYSFGVLALEVI 158 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~--~~~~~DiwslG~~l~~~~ 158 (228)
|++|+||+|+||+++.++.++++|||++......... .....++..|++||.+.+.. .+.++|+||||+++|+|+
T Consensus 125 --~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~ 202 (288)
T cd05583 125 --GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELL 202 (288)
T ss_pred --CeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHH
Confidence 9999999999999999999999999988765433222 22345788999999887654 678999999999999999
Q ss_pred hCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 159 KGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 159 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
+|..||....... ..............+ . ....+..+.+++.+||+.||.+|||+.++.+.|+
T Consensus 203 tg~~p~~~~~~~~--~~~~~~~~~~~~~~~-~---~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 203 TGASPFTVDGEQN--SQSEISRRILKSKPP-F---PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred hCCCCcccCcccc--hHHHHHHHHHccCCC-C---CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 9999986332211 111112222222111 1 1234457889999999999999999888776654
No 332
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.8e-36 Score=231.25 Aligned_cols=212 Identities=21% Similarity=0.290 Sum_probs=159.7
Q ss_pred HHHHHHHHhccC-CCccceeeeeeeec--CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 5 FLREITVLTEIR-HRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 5 ~~~E~~~l~~l~-h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
..+|+..++++. |+|++++++++.++ +..++|+||+.+ ++.+.+.... ..+++.+++.++.|++.||.+||+.
T Consensus 44 ~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~- 119 (282)
T cd07831 44 NLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRN- 119 (282)
T ss_pred HHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 457899999985 99999999999877 889999999975 7777765433 2489999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHHHHHHhC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~~~~g 160 (228)
|++|+||+|+||+++. +.++|+|||.+........ .....++..|+|||.+.. ..++.++|+||+|+++|+|++|
T Consensus 120 --~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~ 195 (282)
T cd07831 120 --GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP-YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSL 195 (282)
T ss_pred --CceecccCHHHEEEcC-CCeEEEecccccccccCCC-cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcC
Confidence 9999999999999999 9999999999876543322 223456788999997654 4468899999999999999999
Q ss_pred CCCccccccccC---------CCchhhhhhhcCC-----CCCC-----CchhhhhhHHHHHHHHHHhhccCCCCCCCHHH
Q 040501 161 KHPRDFLSNVSS---------SNPNILVNEMLDP-----RLPP-----LSVDIRGKVISIMEVAFLCLDNNPESRPNMQT 221 (228)
Q Consensus 161 ~~p~~~~~~~~~---------~~~~~~~~~~~~~-----~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 221 (228)
..||...+.... ............. ..+. ........+..+.++|.+||+++|.+|||+.+
T Consensus 196 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ 275 (282)
T cd07831 196 FPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQ 275 (282)
T ss_pred CcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHH
Confidence 999864332110 0000000000000 0000 00111245678999999999999999999999
Q ss_pred HHH
Q 040501 222 ICQ 224 (228)
Q Consensus 222 il~ 224 (228)
+++
T Consensus 276 ~l~ 278 (282)
T cd07831 276 ALR 278 (282)
T ss_pred Hhh
Confidence 985
No 333
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=7.2e-36 Score=231.14 Aligned_cols=204 Identities=25% Similarity=0.418 Sum_probs=161.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+.+|+++++.++|+|++++++++.++...|++|||+.+ ++.+++.... ..+++.+++.++.|++.++.|||+.
T Consensus 66 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~-- 140 (313)
T cd06633 66 QDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLG-SASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH-- 140 (313)
T ss_pred HHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 4578899999999999999999999999999999999965 6666665433 2378899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccc---cCCcccchhhhhHHHHHHHHHh
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAY---TMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~~~~~ 159 (228)
|++|+||+|+||+++.++.++|+|||.+..... .....++..|+|||.+. ...++.++|+||||+++|+|++
T Consensus 141 -gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~ 215 (313)
T cd06633 141 -NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 215 (313)
T ss_pred -CeecCCCChhhEEECCCCCEEEeecCCCcccCC----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHh
Confidence 999999999999999999999999998764322 22346778899999874 3457889999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|..||..... ............+... ....+..+.+++.+||+.+|.+||++.+++.
T Consensus 216 g~~p~~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 216 RKPPLFNMNA------MSALYHIAQNDSPTLQ--SNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred CCCCCCCCCh------HHHHHHHHhcCCCCCC--ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 9999753321 1122222222222111 1234456889999999999999999999885
No 334
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3e-36 Score=226.08 Aligned_cols=205 Identities=28% Similarity=0.353 Sum_probs=168.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+..|++++++++|+||+++++.+..+...+++||++.+++|.+++.... .++...+..++.|++.++.+||+.
T Consensus 38 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~-- 112 (250)
T cd05123 38 EHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEG---RFSEERARFYAAEIVLALEYLHSL-- 112 (250)
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 367889999999999999999999999999999999999999999987653 378999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
+++|+||+|+||+++.++.++|+|||.+..............++..|++||...+...+.++|+||||+++|++++|..
T Consensus 113 -~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~ 191 (250)
T cd05123 113 -GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKP 191 (250)
T ss_pred -CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCC
Confidence 9999999999999999999999999998876543333344567788999999988888899999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCH---HHHH
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM---QTIC 223 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~---~~il 223 (228)
||..... ............+. + ...+..+.+++++||..||.+|||+ .+++
T Consensus 192 p~~~~~~------~~~~~~~~~~~~~~-~---~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~ 245 (250)
T cd05123 192 PFYAEDR------KEIYEKILKDPLRF-P---EFLSPEARDLISGLLQKDPTKRLGSGGAEEIK 245 (250)
T ss_pred CCCCCCH------HHHHHHHhcCCCCC-C---CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHH
Confidence 9853321 22223332222211 1 1235678899999999999999999 5554
No 335
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=223.31 Aligned_cols=210 Identities=23% Similarity=0.353 Sum_probs=168.0
Q ss_pred HHHHHHHHHHhccC-CCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+++...+.++..-+ +|+||+.+++|..+...++.||.+.. .++.++.+-. +++++..+-++...+++||.||..+.
T Consensus 135 kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~-C~ekLlkrik--~piPE~ilGk~tva~v~AL~YLKeKH 211 (391)
T KOG0983|consen 135 KRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST-CAEKLLKRIK--GPIPERILGKMTVAIVKALYYLKEKH 211 (391)
T ss_pred HHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-HHHHHHHHhc--CCchHHhhhhhHHHHHHHHHHHHHhc
Confidence 56777788777664 89999999999999999999998843 4555555432 23888888899999999999999875
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC---CcccchhhhhHHHHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM---KVTAKCDVYSFGVLALEVI 158 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DiwslG~~l~~~~ 158 (228)
||+|||+||+||+++..|.+|++|||++.++..... .+...|-+.|||||-+... +|+.++||||||+.++|+.
T Consensus 212 --~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA-htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLa 288 (391)
T KOG0983|consen 212 --GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA-HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELA 288 (391)
T ss_pred --ceeecccCccceEEccCCCEEeecccccceeecccc-cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhh
Confidence 999999999999999999999999999988764433 3335677899999988654 5888999999999999999
Q ss_pred hCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 159 KGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 159 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
||..||..- ....+....+++...|... ...+++..+.+++..||.+|+.+||.+.++++
T Consensus 289 Tg~yPy~~c-----~tdFe~ltkvln~ePP~L~-~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 289 TGQYPYKGC-----KTDFEVLTKVLNEEPPLLP-GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred cccCCCCCC-----CccHHHHHHHHhcCCCCCC-cccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 999998632 2233444555554433332 33458889999999999999999999999876
No 336
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.1e-36 Score=236.44 Aligned_cols=214 Identities=24% Similarity=0.390 Sum_probs=161.6
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeec--CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH 79 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 79 (228)
..+.+|+.+++++ +|+||++++++|... ...|+|+|++.+ +|..++... .+++..+..++.|++.||.|||+
T Consensus 51 ~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~ 125 (337)
T cd07852 51 QRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHS 125 (337)
T ss_pred hhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEeccccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH
Confidence 3567899999999 999999999998643 468999999974 888887654 37888889999999999999999
Q ss_pred CCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCC-----CceecccccceeCCccccc-CCcccchhhhhHHHH
Q 040501 80 DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS-----NWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVL 153 (228)
Q Consensus 80 ~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~ 153 (228)
. |++|+||+|+||+++.++.++|+|||.+........ ......++..|+|||.+.+ ..++.++|+||||++
T Consensus 126 ~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~ 202 (337)
T cd07852 126 G---NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCI 202 (337)
T ss_pred C---CeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHH
Confidence 9 999999999999999999999999998876543321 1223457888999998765 457889999999999
Q ss_pred HHHHHhCCCCccccccccC---------CC------------chhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccC
Q 040501 154 ALEVIKGKHPRDFLSNVSS---------SN------------PNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNN 212 (228)
Q Consensus 154 l~~~~~g~~p~~~~~~~~~---------~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 212 (228)
+|+|++|+.||........ .. .......................+.++.++|.+||+.+
T Consensus 203 l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 282 (337)
T cd07852 203 LGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFN 282 (337)
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCC
Confidence 9999999999854321100 00 00000001111111111122335667899999999999
Q ss_pred CCCCCCHHHHHH
Q 040501 213 PESRPNMQTICQ 224 (228)
Q Consensus 213 p~~Rpt~~~il~ 224 (228)
|.+|||+.++++
T Consensus 283 P~~Rps~~~il~ 294 (337)
T cd07852 283 PNKRLTAEEALE 294 (337)
T ss_pred cccccCHHHHhh
Confidence 999999999986
No 337
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.1e-36 Score=237.78 Aligned_cols=215 Identities=24% Similarity=0.389 Sum_probs=162.0
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeee----cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTH----ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLH 78 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh 78 (228)
+.+.+|+.++++++|+||+++++++.. ....++|+||+. ++|.+++.... .+++..+..++.|++.||.|||
T Consensus 49 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH 124 (334)
T cd07855 49 KRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIH 124 (334)
T ss_pred HHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHH
Confidence 457789999999999999999998753 357899999996 57888876433 3899999999999999999999
Q ss_pred hCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC----ceecccccceeCCccccc-CCcccchhhhhHHHH
Q 040501 79 HDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN----WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVL 153 (228)
Q Consensus 79 ~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~ 153 (228)
+. |++|+||+|+||+++.++.++|+|||.+......... .....++..|+|||.+.+ ..++.++|+||||++
T Consensus 125 ~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~ 201 (334)
T cd07855 125 SA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCI 201 (334)
T ss_pred HC---CeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHH
Confidence 99 9999999999999999999999999998765432221 123467888999998765 457889999999999
Q ss_pred HHHHHhCCCCccccccccC---------CCchhh--------hhhhcC--CCC--CCCchhhhhhHHHHHHHHHHhhccC
Q 040501 154 ALEVIKGKHPRDFLSNVSS---------SNPNIL--------VNEMLD--PRL--PPLSVDIRGKVISIMEVAFLCLDNN 212 (228)
Q Consensus 154 l~~~~~g~~p~~~~~~~~~---------~~~~~~--------~~~~~~--~~~--~~~~~~~~~~~~~~~~li~~~l~~~ 212 (228)
+|+|++|..||........ ...... ...... +.. ..........+.++.++|.+||+.+
T Consensus 202 l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 281 (334)
T cd07855 202 FAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFD 281 (334)
T ss_pred HHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCC
Confidence 9999999999854321100 000000 000000 000 0001112345678999999999999
Q ss_pred CCCCCCHHHHHH
Q 040501 213 PESRPNMQTICQ 224 (228)
Q Consensus 213 p~~Rpt~~~il~ 224 (228)
|.+|||+++++.
T Consensus 282 P~~Rpt~~~~l~ 293 (334)
T cd07855 282 PEERITVEQALQ 293 (334)
T ss_pred hhhCcCHHHHHh
Confidence 999999999875
No 338
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1e-35 Score=225.09 Aligned_cols=206 Identities=25% Similarity=0.353 Sum_probs=164.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec--CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
+.+.+|++++++++|+||+++++++... ..+++++|++++++|.+++.... .++...+..++.|++.|+.+||+.
T Consensus 49 ~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~ 125 (264)
T cd06653 49 NALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSN 125 (264)
T ss_pred HHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4678899999999999999999998653 46889999999999999987543 278889999999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCC---CCceecccccceeCCcccccCCcccchhhhhHHHHHHHH
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS---SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~ 157 (228)
|++|+||+|+||+++.++.++|+|||.+....... .......++..|+|||.+.+..++.++|+||||+++|++
T Consensus 126 ---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 202 (264)
T cd06653 126 ---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEM 202 (264)
T ss_pred ---CEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHH
Confidence 99999999999999999999999999987653211 112234578889999999888889999999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcC-CCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLD-PRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++|..||..... ......... +..+.. ....+..+.+++.+||. +|..|||+.++++
T Consensus 203 ~~g~~p~~~~~~------~~~~~~~~~~~~~~~~---p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 203 LTEKPPWAEYEA------MAAIFKIATQPTKPML---PDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HhCCCCCCccCH------HHHHHHHHcCCCCCCC---CcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 999999863321 112222221 111111 23456678999999999 5799999998875
No 339
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.7e-36 Score=229.07 Aligned_cols=210 Identities=24% Similarity=0.391 Sum_probs=160.5
Q ss_pred HHHHHHHH-HhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 4 EFLREITV-LTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND-TSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 4 ~~~~E~~~-l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+..|+.. ++.++|+||+++++++..+...|+++||++ ++|.+++... .....+++..++.++.|++.|+.|||+.+
T Consensus 45 ~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 123 (283)
T cd06617 45 RLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL 123 (283)
T ss_pred HHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 45566665 555689999999999999999999999996 5777776542 22345899999999999999999999853
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc----CCcccchhhhhHHHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT----MKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~DiwslG~~l~~~ 157 (228)
+++|+||+|+||+++.++.++|+|||.+....... ......++..|+|||.+.+ ..++.++|+||+|+++|+|
T Consensus 124 --~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l 200 (283)
T cd06617 124 --SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV-AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIEL 200 (283)
T ss_pred --CeecCCCCHHHEEECCCCCEEEeeccccccccccc-ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHH
Confidence 89999999999999999999999999987654221 1223457788999998865 3467899999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++|..||..... .............+... ...++.++.++|.+||..+|.+|||+.++++
T Consensus 201 ~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 201 ATGRFPYDSWKT-----PFQQLKQVVEEPSPQLP--AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred HhCCCCCCcccc-----CHHHHHHHHhcCCCCCC--ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 999999853211 11122222222222111 1235667999999999999999999999986
No 340
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=4.1e-36 Score=243.95 Aligned_cols=211 Identities=18% Similarity=0.227 Sum_probs=153.3
Q ss_pred HHHHHHHHHhccCC------Cccceeeeeeeec-CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 040501 4 EFLREITVLTEIRH------RNIVKFYGFCTHA-RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 4 ~~~~E~~~l~~l~h------~~i~~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (228)
.+..|+++++.++| .++++++++|... .+.|+||+++ +++|.+++.... .+++..+..++.|++.||.|
T Consensus 171 ~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~y 246 (467)
T PTZ00284 171 DAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDY 246 (467)
T ss_pred HHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHH
Confidence 45668888877754 4588888888654 5789999988 567877776543 38889999999999999999
Q ss_pred hhh-CCCCCeeecCCCCCceEEcCCC----------------ceEEeecccccccCCCCCCceecccccceeCCcccccC
Q 040501 77 LHH-DCIPPIVHRDISSKNVLLDLEY----------------EAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM 139 (228)
Q Consensus 77 lh~-~~~~~i~h~di~p~nil~~~~~----------------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~ 139 (228)
||+ . ||+||||||+||+++.++ .+||+|||.+.... .......+++.|+|||++.+.
T Consensus 247 LH~~~---gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~ 320 (467)
T PTZ00284 247 FHTEL---HLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLGL 320 (467)
T ss_pred HHhcC---CeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCc---cccccccCCccccCcHHhhcC
Confidence 997 6 999999999999998765 49999999875422 223346789999999999999
Q ss_pred CcccchhhhhHHHHHHHHHhCCCCccccccccCC---------Cchhhh--------hhhcCC----CCCCCc-------
Q 040501 140 KVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSS---------NPNILV--------NEMLDP----RLPPLS------- 191 (228)
Q Consensus 140 ~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~---------~~~~~~--------~~~~~~----~~~~~~------- 191 (228)
.++.++|||||||++|+|++|+.||......... .+.... ...... ......
T Consensus 321 ~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (467)
T PTZ00284 321 GWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIA 400 (467)
T ss_pred CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhh
Confidence 9999999999999999999999998643221100 000000 000000 000000
Q ss_pred ----hhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 192 ----VDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 192 ----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.........+.+||.+||+.||.+|||++|+++
T Consensus 401 ~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 401 RARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred cccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 000011345779999999999999999999986
No 341
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.4e-37 Score=239.87 Aligned_cols=206 Identities=26% Similarity=0.383 Sum_probs=172.0
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+..+.+|+++++.++||||++++.+......+|+||||+.++.+++++..++.. ....+...+.|+.+|++|||++
T Consensus 99 ~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~---~e~~ar~~F~q~vsaveYcH~k- 174 (596)
T KOG0586|consen 99 RQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRM---KEKEARAKFRQIVSAVEYCHSK- 174 (596)
T ss_pred HHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccc---hhhhhhhhhHHHHHHHHHHhhc-
Confidence 345889999999999999999999999999999999999999999999987764 4477888999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcc-cchhhhhHHHHHHHHHhC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVT-AKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslG~~l~~~~~g 160 (228)
+++|||||++|++++.+..+||+|||.++.... .....+++|++.|.|||++.+..+. ..+|+||+|+++|.+++|
T Consensus 175 --~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~-~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~G 251 (596)
T KOG0586|consen 175 --NIVHRDLKAENILLDENMNIKIADFGFSTFFDY-GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEG 251 (596)
T ss_pred --ceeccccchhhcccccccceeeeccccceeecc-cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeec
Confidence 999999999999999999999999999998873 3445668999999999999998874 589999999999999999
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.+||+.. +......+.+..+..-.. ..+-+-.++|+++|.++|.+|++.+++-+
T Consensus 252 sLPFDG~------~lk~Lr~rvl~gk~rIp~----~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 252 SLPFDGQ------NLKELRPRVLRGKYRIPF----YMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred ccccCCc------ccccccchheeeeecccc----eeechhHHHHHHhhccCccccCCHHHhhh
Confidence 9997632 223333344443332111 11223458999999999999999998754
No 342
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=5.6e-36 Score=228.92 Aligned_cols=216 Identities=25% Similarity=0.354 Sum_probs=163.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec--CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
+.+.+|++++++++|+|++++++++... ...++|+||+++ +|.+++.... ..+++..++.++.|++.|+++||+.
T Consensus 43 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~ 119 (287)
T cd07840 43 ITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSN 119 (287)
T ss_pred HHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4578899999999999999999999887 899999999975 7888876543 3489999999999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccC-CcccchhhhhHHHHHHHHH
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVI 158 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~ 158 (228)
|++|+||+|+||+++.++.++|+|||.+......... .....++..|+|||.+.+. .++.++||||||+++|+++
T Consensus 120 ---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~ 196 (287)
T cd07840 120 ---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELF 196 (287)
T ss_pred ---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998876544321 2234557789999977653 5788999999999999999
Q ss_pred hCCCCccccccccCCCch---------hhh--------hhhcCCCCC---CCchhhhh-hHHHHHHHHHHhhccCCCCCC
Q 040501 159 KGKHPRDFLSNVSSSNPN---------ILV--------NEMLDPRLP---PLSVDIRG-KVISIMEVAFLCLDNNPESRP 217 (228)
Q Consensus 159 ~g~~p~~~~~~~~~~~~~---------~~~--------~~~~~~~~~---~~~~~~~~-~~~~~~~li~~~l~~~p~~Rp 217 (228)
+|..||............ ... ......... ........ .+..+.+++.+||..+|.+||
T Consensus 197 t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp 276 (287)
T cd07840 197 LGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRI 276 (287)
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCc
Confidence 999998543221100000 000 000000000 00001111 256789999999999999999
Q ss_pred CHHHHHH
Q 040501 218 NMQTICQ 224 (228)
Q Consensus 218 t~~~il~ 224 (228)
|+.++++
T Consensus 277 ~~~~~l~ 283 (287)
T cd07840 277 SADQALQ 283 (287)
T ss_pred CHHHHhh
Confidence 9999976
No 343
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.9e-36 Score=229.98 Aligned_cols=216 Identities=25% Similarity=0.334 Sum_probs=166.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+..|++++++++|+|++++++++......++++|++. ++|.+++.... ..+++..+..++.|++.+|.+||+.
T Consensus 43 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~-- 117 (282)
T cd07829 43 STALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSH-- 117 (282)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 456789999999999999999999999999999999997 48999987653 2389999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++|+|||.+..............++..|+|||.+.+. .++.++|+||||+++|++++|.
T Consensus 118 -~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~ 196 (282)
T cd07829 118 -RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGK 196 (282)
T ss_pred -CcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999987665433333334456789999988766 6888999999999999999999
Q ss_pred CCccccccccCCC---------chhhh--------hhhcCCCCC--CCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHH
Q 040501 162 HPRDFLSNVSSSN---------PNILV--------NEMLDPRLP--PLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222 (228)
Q Consensus 162 ~p~~~~~~~~~~~---------~~~~~--------~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i 222 (228)
.||.......... ..... .....+... .........+..+.+++.+||..+|.+||++.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~ 276 (282)
T cd07829 197 PLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEA 276 (282)
T ss_pred CCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHH
Confidence 9986432211000 00000 000000000 0011122335678999999999999999999998
Q ss_pred HH
Q 040501 223 CQ 224 (228)
Q Consensus 223 l~ 224 (228)
++
T Consensus 277 l~ 278 (282)
T cd07829 277 LK 278 (282)
T ss_pred hh
Confidence 75
No 344
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4.4e-36 Score=232.02 Aligned_cols=212 Identities=23% Similarity=0.346 Sum_probs=156.7
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecC--------eEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHAR--------HSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 75 (228)
.+.+|++++++++||||+++++++.... ..++|+||+.+ +|.+.+.... ..+++.+++.++.|++.||.
T Consensus 57 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~ 133 (310)
T cd07865 57 TALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKN--VKFTLSEIKKVMKMLLNGLY 133 (310)
T ss_pred HHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHH
Confidence 4568999999999999999999886543 45999999965 7777765433 23899999999999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC----ceecccccceeCCcccccCC-cccchhhhhH
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN----WTEFAGTYGYVAPELAYTMK-VTAKCDVYSF 150 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~-~~~~~Diwsl 150 (228)
|||+. |++|+||+|+||+++.++.++|+|||.+......... .....++..|+|||.+.+.. ++.++|+||+
T Consensus 134 ~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl 210 (310)
T cd07865 134 YIHRN---KILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGA 210 (310)
T ss_pred HHHHC---CeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHH
Confidence 99999 9999999999999999999999999998765432221 12335677899999876654 6889999999
Q ss_pred HHHHHHHHhCCCCccccccccCCCchhhhhhhcCC------------------CCCCC-----chh--hhhhHHHHHHHH
Q 040501 151 GVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDP------------------RLPPL-----SVD--IRGKVISIMEVA 205 (228)
Q Consensus 151 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~-----~~~--~~~~~~~~~~li 205 (228)
|+++|+|++|..||......... .....+... ..+.. ... .......+.++|
T Consensus 211 G~~l~el~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli 287 (310)
T cd07865 211 GCIMAEMWTRSPIMQGNTEQHQL---TLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLI 287 (310)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHH
Confidence 99999999999998543211000 000000000 00000 000 001134567999
Q ss_pred HHhhccCCCCCCCHHHHHH
Q 040501 206 FLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 206 ~~~l~~~p~~Rpt~~~il~ 224 (228)
.+||..||.+|||++++++
T Consensus 288 ~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 288 DKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HHHhcCChhhccCHHHHhc
Confidence 9999999999999999975
No 345
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.4e-36 Score=236.05 Aligned_cols=215 Identities=21% Similarity=0.353 Sum_probs=159.4
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec-----CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA-----RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYL 77 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 77 (228)
.++.+|+.++++++|+||+++++++... ...|+++|++.+ ++.+.+... .+++..+..++.|++.||.+|
T Consensus 48 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~L 122 (336)
T cd07849 48 QRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLIKTQ----HLSNDHIQYFLYQILRGLKYI 122 (336)
T ss_pred HHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHH
Confidence 3567899999999999999999887543 358999999965 777766532 388899999999999999999
Q ss_pred hhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC---ceecccccceeCCccccc-CCcccchhhhhHHHH
Q 040501 78 HHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN---WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVL 153 (228)
Q Consensus 78 h~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~ 153 (228)
|+. |++|+||||+||+++.++.++|+|||++......... .....++..|+|||.+.+ ..++.++|+||+|++
T Consensus 123 H~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvi 199 (336)
T cd07849 123 HSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCI 199 (336)
T ss_pred HhC---CeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHH
Confidence 999 9999999999999999999999999998765432221 122456888999998654 457889999999999
Q ss_pred HHHHHhCCCCccccccccC---------CCchhhhhhhcC------------CCCCCCchhhhhhHHHHHHHHHHhhccC
Q 040501 154 ALEVIKGKHPRDFLSNVSS---------SNPNILVNEMLD------------PRLPPLSVDIRGKVISIMEVAFLCLDNN 212 (228)
Q Consensus 154 l~~~~~g~~p~~~~~~~~~---------~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~li~~~l~~~ 212 (228)
+|+|++|+.||........ .........+.. .............+.++.+++.+||+.+
T Consensus 200 l~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 279 (336)
T cd07849 200 LAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFN 279 (336)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCC
Confidence 9999999999854221100 000000000000 0000001111234567899999999999
Q ss_pred CCCCCCHHHHHHH
Q 040501 213 PESRPNMQTICQL 225 (228)
Q Consensus 213 p~~Rpt~~~il~~ 225 (228)
|.+|||+.++++.
T Consensus 280 P~~Rpt~~e~l~h 292 (336)
T cd07849 280 PHKRITVEEALAH 292 (336)
T ss_pred hhhCcCHHHHhcC
Confidence 9999999999863
No 346
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-37 Score=244.32 Aligned_cols=210 Identities=24% Similarity=0.399 Sum_probs=174.8
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.++|.+|+.+|.+|+|+|+++++++.-+ ....+|+|.+..|+|.+.++. .....+.......++.||+.|+.||.++
T Consensus 155 mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLesk- 231 (1039)
T KOG0199|consen 155 MDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESK- 231 (1039)
T ss_pred HHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhh-
Confidence 3689999999999999999999999877 677899999999999999987 4445588899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCcee---cccccceeCCcccccCCcccchhhhhHHHHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE---FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~ 158 (228)
+.||||+...|+++.....+||+|||+.+..+.+...+.. ..-+..|.|||.+.-.+++.+||+|++|+++|||+
T Consensus 232 --rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMF 309 (1039)
T KOG0199|consen 232 --RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMF 309 (1039)
T ss_pred --hhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhh
Confidence 9999999999999999999999999999988766554322 23356799999999999999999999999999999
Q ss_pred h-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 159 K-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 159 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
+ |..||...... ..+..+-.+..... ...+++.++++++.||..+|.+|||+..|.+.
T Consensus 310 tyGEePW~G~~g~------qIL~~iD~~erLpR---Pk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 310 TYGEEPWVGCRGI------QILKNIDAGERLPR---PKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred ccCCCCCCCCCHH------HHHHhccccccCCC---CCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 8 88897644332 23333322222111 23677889999999999999999999999743
No 347
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.4e-35 Score=225.93 Aligned_cols=199 Identities=18% Similarity=0.198 Sum_probs=157.1
Q ss_pred HHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeecCC
Q 040501 11 VLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDI 90 (228)
Q Consensus 11 ~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~di 90 (228)
.++...|++|+++.+.+......++|+||+.+++|.+++.... .+++..+..++.|++.|+.|||+. +++|+||
T Consensus 50 ~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di 123 (278)
T cd05606 50 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG---VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDL 123 (278)
T ss_pred HHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCC
Confidence 3444579999999999999999999999999999998886543 389999999999999999999999 9999999
Q ss_pred CCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHhCCCCcccccc
Q 040501 91 SSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169 (228)
Q Consensus 91 ~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~g~~p~~~~~~ 169 (228)
+|+||+++.++.++|+|||.+....... .....++..|+|||.+.+. .++.++|+||+|+++|+|++|..||.....
T Consensus 124 ~p~nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~ 201 (278)
T cd05606 124 KPANILLDEHGHVRISDLGLACDFSKKK--PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 201 (278)
T ss_pred CHHHEEECCCCCEEEccCcCccccCccC--CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCc
Confidence 9999999999999999999887543222 2234678899999998754 578999999999999999999999864322
Q ss_pred ccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 040501 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP-----NMQTICQ 224 (228)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~il~ 224 (228)
.... .. ............ ...+..+.+++.+||..+|.+|| ++.++++
T Consensus 202 ~~~~---~~-~~~~~~~~~~~~---~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 202 KDKH---EI-DRMTLTMAVELP---DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred cchH---HH-HHHhhccCCCCC---CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 1111 11 111111111111 12356789999999999999999 9999875
No 348
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=7.9e-36 Score=229.00 Aligned_cols=208 Identities=20% Similarity=0.251 Sum_probs=154.2
Q ss_pred HHHHHhccCCCccceeeeeeeecC----eEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 8 EITVLTEIRHRNIVKFYGFCTHAR----HSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 8 E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
+...+..+.|++++++++.+.... ..+++++++. .++.+.+.... ..+...+..++.|++.|+.|||+.
T Consensus 73 ~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~--- 145 (294)
T PHA02882 73 LWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEH--- 145 (294)
T ss_pred HHHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhc-cCHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 334455678999999998765433 3467777664 35555554332 146778889999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCC-------CceecccccceeCCcccccCCcccchhhhhHHHHHHH
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS-------NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 156 (228)
+++||||||+||+++.++.++|+|||+++....... ......|++.|+|||.+.+..++.++|||||||++|+
T Consensus 146 ~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~e 225 (294)
T PHA02882 146 GISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLK 225 (294)
T ss_pred CeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999876542221 1123468899999999999899999999999999999
Q ss_pred HHhCCCCccccccccCC---CchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 157 VIKGKHPRDFLSNVSSS---NPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|++|..||......... .......++..+.. .....+.++.+++..||..+|.+||+++++++.|+
T Consensus 226 l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 226 WAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKI-----KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHhCCCCCCccccchHHHHHhHHHHHHHhhhhhh-----ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 99999998654221100 00011122222211 12344567999999999999999999999999874
No 349
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.2e-35 Score=259.99 Aligned_cols=211 Identities=30% Similarity=0.554 Sum_probs=162.2
Q ss_pred HHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCe
Q 040501 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPI 85 (228)
Q Consensus 6 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i 85 (228)
..|++.+++++||||++++++|.+....|+||||+++++|.++++. +++.++..++.|++.|++|||..+..++
T Consensus 731 ~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~i 804 (968)
T PLN00113 731 SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAV 804 (968)
T ss_pred HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCe
Confidence 4678999999999999999999999999999999999999999852 7888999999999999999995544599
Q ss_pred eecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCcc
Q 040501 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRD 165 (228)
Q Consensus 86 ~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~ 165 (228)
+||||||+||+++.++..++. ++....... .....+++.|+|||++.+..++.++||||+|+++|||++|+.||.
T Consensus 805 iH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~ 879 (968)
T PLN00113 805 VVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT----DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPAD 879 (968)
T ss_pred ecCCCCHHhEEECCCCceEEE-ecccccccc----CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCC
Confidence 999999999999988877764 444332211 112356789999999998889999999999999999999999984
Q ss_pred ccccccCCCchhh---------hhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 166 FLSNVSSSNPNIL---------VNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 166 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
....... ..... .....++..............++.+++.+||+.||.+|||+.++++.|++
T Consensus 880 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~ 950 (968)
T PLN00113 880 AEFGVHG-SIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLES 950 (968)
T ss_pred cccCCCC-cHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHH
Confidence 3211111 00000 11122222221111123445568899999999999999999999999874
No 350
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-37 Score=224.99 Aligned_cols=197 Identities=26% Similarity=0.283 Sum_probs=166.4
Q ss_pred HHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCe
Q 040501 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPI 85 (228)
Q Consensus 6 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i 85 (228)
..|-++|+..+||.+..+...|+.+.++|+||||..||.|+-.+++.. .+++.....+...|+.||.|||++ +|
T Consensus 216 lTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~---~i 289 (516)
T KOG0690|consen 216 LTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSR---NI 289 (516)
T ss_pred hhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhC---Ce
Confidence 458889999999999999999999999999999999999988877643 388999999999999999999999 99
Q ss_pred eecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCcc
Q 040501 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRD 165 (228)
Q Consensus 86 ~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~ 165 (228)
+.||+|.+|.+++.+|.+||+|||+++..........+++|+|.|+|||++....|..+.|.|.+|+++|+|++|+.||-
T Consensus 290 vYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFy 369 (516)
T KOG0690|consen 290 VYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFY 369 (516)
T ss_pred eeeechhhhheeccCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccc
Confidence 99999999999999999999999999977666666778999999999999999999999999999999999999999974
Q ss_pred ccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCC
Q 040501 166 FLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPN 218 (228)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 218 (228)
... -...+.-++-..+.. .+..+++...|+...|.+||++|.-
T Consensus 370 n~d------h~kLFeLIl~ed~kF----Pr~ls~eAktLLsGLL~kdP~kRLG 412 (516)
T KOG0690|consen 370 NKD------HEKLFELILMEDLKF----PRTLSPEAKTLLSGLLKKDPKKRLG 412 (516)
T ss_pred ccc------hhHHHHHHHhhhccC----CccCCHHHHHHHHHHhhcChHhhcC
Confidence 322 222222222222111 1245557789999999999999953
No 351
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.2e-35 Score=227.22 Aligned_cols=209 Identities=22% Similarity=0.334 Sum_probs=162.1
Q ss_pred HHHHHHHHHhcc---CCCccceeeeeeeecCe-----EEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 040501 4 EFLREITVLTEI---RHRNIVKFYGFCTHARH-----SFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 4 ~~~~E~~~l~~l---~h~~i~~~~~~~~~~~~-----~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 75 (228)
.+.+|+.+++++ +|+|++++++++..... .++++|++.+ +|.+++..... ..+++..++.++.|++.||.
T Consensus 44 ~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~ 121 (287)
T cd07838 44 STLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVD 121 (287)
T ss_pred hHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHH
Confidence 466788877766 59999999999987766 9999999975 78888765432 24899999999999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHH
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLAL 155 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~ 155 (228)
+||+. +++|+||+|+||+++.++.++|+|||.+......... ....++..|+|||.+.+..++.++|+||+|+++|
T Consensus 122 ~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~ 197 (287)
T cd07838 122 FLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMAL-TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFA 197 (287)
T ss_pred HHHHC---CeeeccCChhhEEEccCCCEEEeccCcceeccCCccc-ccccccccccChHHhccCCCCCcchhhhHHHHHH
Confidence 99999 9999999999999999999999999998776433221 2234677899999998888999999999999999
Q ss_pred HHHhCCCCccccccccCCCchhhhhhhcC-----------------------CCCCCCchhhhhhHHHHHHHHHHhhccC
Q 040501 156 EVIKGKHPRDFLSNVSSSNPNILVNEMLD-----------------------PRLPPLSVDIRGKVISIMEVAFLCLDNN 212 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~li~~~l~~~ 212 (228)
+|++|.+||...... ....++.+ .............+..+.+++.+||+.|
T Consensus 198 ~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 271 (287)
T cd07838 198 ELFRRRPLFRGTSEA------DQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFN 271 (287)
T ss_pred HHHhCCCcccCCChH------HHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccC
Confidence 999999997643211 11111100 0001111112345567889999999999
Q ss_pred CCCCCCHHHHHH
Q 040501 213 PESRPNMQTICQ 224 (228)
Q Consensus 213 p~~Rpt~~~il~ 224 (228)
|.+||++.+++.
T Consensus 272 p~~Rp~~~~il~ 283 (287)
T cd07838 272 PHKRISAFEALQ 283 (287)
T ss_pred CccCCCHHHHhc
Confidence 999999999875
No 352
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-36 Score=246.73 Aligned_cols=216 Identities=27% Similarity=0.447 Sum_probs=176.3
Q ss_pred ChHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCC-----C------C--CCCCHHHHHHH
Q 040501 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT-----S------A--EELGWSRRINV 66 (228)
Q Consensus 1 ~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~------~--~~~~~~~~~~~ 66 (228)
+++.+..|+++++.+ +|+||+.+++.+..+...++|+||+..|+|.++++.+. . . ..++....+.+
T Consensus 344 ~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsf 423 (609)
T KOG0200|consen 344 EKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSF 423 (609)
T ss_pred HHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHH
Confidence 367899999999999 79999999999999999999999999999999998655 0 0 12788899999
Q ss_pred HHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCc-eecc--cccceeCCcccccCCccc
Q 040501 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW-TEFA--GTYGYVAPELAYTMKVTA 143 (228)
Q Consensus 67 ~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~-~~~~--~~~~y~aPE~~~~~~~~~ 143 (228)
+.||+.|++||++. +.+|||+..+||+++.+..+||+|||+++......... .... -+..|+|||.+....++.
T Consensus 424 a~QIa~GMe~L~~~---~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~ 500 (609)
T KOG0200|consen 424 AYQIANGMEYLASV---PCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTS 500 (609)
T ss_pred HHHHHHHHHHHhhC---CccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccc
Confidence 99999999999999 99999999999999999999999999998655433332 1111 355799999999999999
Q ss_pred chhhhhHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHH
Q 040501 144 KCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222 (228)
Q Consensus 144 ~~DiwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i 222 (228)
+|||||+|+++||+++ |..||+.... .......+.++.....+ ..+..+++++++.||+.+|.+||++.++
T Consensus 501 kSDVWSfGI~L~EifsLG~~PYp~~~~-----~~~l~~~l~~G~r~~~P---~~c~~eiY~iM~~CW~~~p~~RP~F~~~ 572 (609)
T KOG0200|consen 501 KSDVWSFGILLWEIFTLGGTPYPGIPP-----TEELLEFLKEGNRMEQP---EHCSDEIYDLMKSCWNADPEDRPTFSEC 572 (609)
T ss_pred cchhhHHHHHHHHHhhCCCCCCCCCCc-----HHHHHHHHhcCCCCCCC---CCCCHHHHHHHHHHhCCCcccCCCHHHH
Confidence 9999999999999998 8899864211 11223333333332222 2446689999999999999999999999
Q ss_pred HHHhh
Q 040501 223 CQLLC 227 (228)
Q Consensus 223 l~~l~ 227 (228)
.+.|+
T Consensus 573 ~~~~~ 577 (609)
T KOG0200|consen 573 VEFFE 577 (609)
T ss_pred HHHHH
Confidence 99886
No 353
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.5e-35 Score=230.70 Aligned_cols=211 Identities=24% Similarity=0.384 Sum_probs=160.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeee-cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTH-ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+.+|+++++.++||||+++.++|.. ....|+++|++ +++|..++... .++...+..++.|+++||.+||+.
T Consensus 54 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~- 127 (328)
T cd07856 54 KRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSA- 127 (328)
T ss_pred HHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 567889999999999999999999865 56789999998 45888877543 267788889999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHHHHHHhC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~~~~g 160 (228)
|++|+||+|+||+++.++.++|+|||.+...... .....++..|+|||.+.+ ..++.++|+||||+++|++++|
T Consensus 128 --~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg 202 (328)
T cd07856 128 --GVVHRDLKPSNILINENCDLKICDFGLARIQDPQ---MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEG 202 (328)
T ss_pred --CcccCCCCHHHEeECCCCCEEeCccccccccCCC---cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999998754322 223456778999998765 5678999999999999999999
Q ss_pred CCCccccccccC---------CCchhhh------------hhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCH
Q 040501 161 KHPRDFLSNVSS---------SNPNILV------------NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM 219 (228)
Q Consensus 161 ~~p~~~~~~~~~---------~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 219 (228)
..||........ ..+.... .........+........+..+.++|.+||+.+|.+|||+
T Consensus 203 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~ 282 (328)
T cd07856 203 KPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISA 282 (328)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCH
Confidence 999864322100 0000000 0110001111111122455789999999999999999999
Q ss_pred HHHHH
Q 040501 220 QTICQ 224 (228)
Q Consensus 220 ~~il~ 224 (228)
.+++.
T Consensus 283 ~ell~ 287 (328)
T cd07856 283 AEALA 287 (328)
T ss_pred HHHhc
Confidence 99875
No 354
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.4e-35 Score=227.82 Aligned_cols=209 Identities=25% Similarity=0.392 Sum_probs=160.6
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-C
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH-D 80 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~ 80 (228)
..+.+|+.++.+. .|+||+++++++......|++||++. +++.+++..... .+++..+..++.|++.++.|||+ .
T Consensus 58 ~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~ 134 (296)
T cd06618 58 KRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS-TCLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKEKH 134 (296)
T ss_pred HHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-cCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 3456777777777 49999999999999999999999985 467776654332 48889999999999999999997 6
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCC----cccchhhhhHHHHHHH
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMK----VTAKCDVYSFGVLALE 156 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~DiwslG~~l~~ 156 (228)
|++|+||+|+||+++.++.++|+|||.+........ .....++..|+|||.+.+.. ++.++|+||||+++|+
T Consensus 135 ---~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~e 210 (296)
T cd06618 135 ---GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA-KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVE 210 (296)
T ss_pred ---CEecCCCcHHHEEEcCCCCEEECccccchhccCCCc-ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHH
Confidence 999999999999999999999999999876543222 22235677899999987553 7889999999999999
Q ss_pred HHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 157 VIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|++|..||..... .............+.... ...++.++.+++.+||..||.+|||+.++++
T Consensus 211 l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 272 (296)
T cd06618 211 LATGQFPYKNCKT-----EFEVLTKILQEEPPSLPP-NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ 272 (296)
T ss_pred HHhCCCCCCcchh-----HHHHHHHHhcCCCCCCCC-CCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 9999999853211 112222222222221111 1135667899999999999999999999875
No 355
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-36 Score=228.64 Aligned_cols=204 Identities=24% Similarity=0.221 Sum_probs=169.1
Q ss_pred HHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCC
Q 040501 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPP 84 (228)
Q Consensus 5 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~ 84 (228)
.+.|-++|++++.+.||.+-..|+..+.+++|+..|+||+|.-.|.+.+. +.++++.++.++.+|+-||.+||+. +
T Consensus 232 aLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~---~ 307 (591)
T KOG0986|consen 232 ALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRR---R 307 (591)
T ss_pred hhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhc---c
Confidence 46799999999999999999999999999999999999999988877654 5599999999999999999999999 9
Q ss_pred eeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCc
Q 040501 85 IVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPR 164 (228)
Q Consensus 85 i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~ 164 (228)
||+||+||+||++|+.|+++|+|+|++..+..... .....||..|||||++.+..|+.+.|.|||||++|+|+.|+.||
T Consensus 308 iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~-~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPF 386 (591)
T KOG0986|consen 308 IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP-IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPF 386 (591)
T ss_pred eeeccCChhheeeccCCCeEeeccceEEecCCCCc-cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCch
Confidence 99999999999999999999999999998765443 34458999999999999999999999999999999999999998
Q ss_pred cccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCH
Q 040501 165 DFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM 219 (228)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 219 (228)
..-..-. ..+.+.+........ .....+++..++.+..|.+||.+|.-.
T Consensus 387 r~~KeKv---k~eEvdrr~~~~~~e---y~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 387 RQRKEKV---KREEVDRRTLEDPEE---YSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred hhhhhhh---hHHHHHHHHhcchhh---cccccCHHHHHHHHHHHccCHHHhccC
Confidence 6432211 111111111111111 124667788899999999999999653
No 356
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=9e-36 Score=227.03 Aligned_cols=206 Identities=27% Similarity=0.401 Sum_probs=168.1
Q ss_pred HHHHHHHHHHhccC-CCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+.+|+++++++. |+||+++++++..+...+++||++.+++|.+++.... .+++..++.++.|++.||.+||+.
T Consensus 46 ~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~- 121 (280)
T cd05581 46 KYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSK- 121 (280)
T ss_pred HHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 45788999999998 9999999999999999999999999999999987653 389999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCC--------------------CceecccccceeCCcccccCCc
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS--------------------NWTEFAGTYGYVAPELAYTMKV 141 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~--------------------~~~~~~~~~~y~aPE~~~~~~~ 141 (228)
|++|+||+|+||+++.++.++++|||++........ ......++..|+|||...+..+
T Consensus 122 --~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~ 199 (280)
T cd05581 122 --GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPA 199 (280)
T ss_pred --CeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCC
Confidence 999999999999999999999999999886654321 1122356788999999888888
Q ss_pred ccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCH--
Q 040501 142 TAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM-- 219 (228)
Q Consensus 142 ~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-- 219 (228)
+.++|+||||++++++++|..||..... .............. + ...+..+.+++.+||+.+|.+|||+
T Consensus 200 ~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~-~---~~~~~~~~~li~~~l~~~p~~R~~~~~ 269 (280)
T cd05581 200 GKSSDLWALGCIIYQMLTGKPPFRGSNE------YLTFQKILKLEYSF-P---PNFPPDAKDLIEKLLVLDPQDRLGVNE 269 (280)
T ss_pred ChhhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHHhcCCCC-C---CccCHHHHHHHHHHhcCCHhhCCCccc
Confidence 9999999999999999999999864431 11222222211111 1 1335578899999999999999999
Q ss_pred --HHHHH
Q 040501 220 --QTICQ 224 (228)
Q Consensus 220 --~~il~ 224 (228)
.++++
T Consensus 270 ~~~~ll~ 276 (280)
T cd05581 270 GYDELKA 276 (280)
T ss_pred CHHHHhc
Confidence 77764
No 357
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.8e-35 Score=227.84 Aligned_cols=213 Identities=23% Similarity=0.343 Sum_probs=160.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecC----------eEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR----------HSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAH 72 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~ 72 (228)
..+.+|++++++++||||+++++++.+.. ..++++||+++ ++...+.... ..+++..++.++.|++.
T Consensus 51 ~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~ 127 (302)
T cd07864 51 ITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDHIKSFMKQLLE 127 (302)
T ss_pred HHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHHHHHHHHHHHH
Confidence 35678999999999999999999886544 78999999976 6666665432 24899999999999999
Q ss_pred HHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCC-CceecccccceeCCcccccC-CcccchhhhhH
Q 040501 73 ALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS-NWTEFAGTYGYVAPELAYTM-KVTAKCDVYSF 150 (228)
Q Consensus 73 ~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~Diwsl 150 (228)
||.|||+. |++|+||+|+||+++.++.++|+|||.+........ ......++..|+|||.+.+. .++.++|||||
T Consensus 128 aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~sl 204 (302)
T cd07864 128 GLNYCHKK---NFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSC 204 (302)
T ss_pred HHHHHHhC---CeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHH
Confidence 99999999 999999999999999999999999999876543332 12223456789999987654 46889999999
Q ss_pred HHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCC-----------------------CCCchhhhhhHHHHHHHHHH
Q 040501 151 GVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRL-----------------------PPLSVDIRGKVISIMEVAFL 207 (228)
Q Consensus 151 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~li~~ 207 (228)
|+++|++++|++||....... ............. ..........+..+.+++.+
T Consensus 205 G~~~~el~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 281 (302)
T cd07864 205 GCILGELFTKKPIFQANQELA---QLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDH 281 (302)
T ss_pred HHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHH
Confidence 999999999999986432111 0000000000000 00001112346678999999
Q ss_pred hhccCCCCCCCHHHHHH
Q 040501 208 CLDNNPESRPNMQTICQ 224 (228)
Q Consensus 208 ~l~~~p~~Rpt~~~il~ 224 (228)
||+.+|.+|||+.++++
T Consensus 282 ~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 282 MLTLDPSKRCTAEEALN 298 (302)
T ss_pred HccCChhhCCCHHHHhc
Confidence 99999999999999875
No 358
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.9e-35 Score=226.48 Aligned_cols=210 Identities=23% Similarity=0.295 Sum_probs=163.6
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+.+|+++++++ +|++|+++.+.+..+...|+|+|++.+++|.+++.... .++...+..++.|++.||.+||+.
T Consensus 49 ~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~- 124 (290)
T cd05613 49 EHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLHKL- 124 (290)
T ss_pred HHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 4577899999999 58999999999999999999999999999999987543 378888899999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccC--CcccchhhhhHHHHHHHHH
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTM--KVTAKCDVYSFGVLALEVI 158 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~l~~~~ 158 (228)
|++|+||+|+||+++.++.++|+|||++......... .....++..|+|||.+.+. .++.++|+||+|+++|+++
T Consensus 125 --~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll 202 (290)
T cd05613 125 --GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELL 202 (290)
T ss_pred --CeeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHh
Confidence 9999999999999999999999999988765432211 2234578889999988753 3678899999999999999
Q ss_pred hCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 040501 159 KGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP-----NMQTICQ 224 (228)
Q Consensus 159 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----t~~~il~ 224 (228)
+|..||...... ...............+ .+ ...+..+.+++.+||+.+|.+|| ++.++++
T Consensus 203 ~g~~p~~~~~~~--~~~~~~~~~~~~~~~~-~~---~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 203 TGASPFTVDGEK--NSQAEISRRILKSEPP-YP---QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred cCCCCCCcCCcc--ccHHHHHHHhhccCCC-CC---ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 999998632211 1111122222221111 11 23455688999999999999997 6666654
No 359
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=4.5e-35 Score=228.49 Aligned_cols=215 Identities=23% Similarity=0.320 Sum_probs=158.8
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeee----cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTH----ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYL 77 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 77 (228)
+.+.+|+.+++++ .|+||+++++.+.. ....|++++++. ++|.+++.... .+++..+..++.|++.||.||
T Consensus 46 ~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~L 121 (332)
T cd07857 46 KRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRSGQ---PLTDAHFQSFIYQILCGLKYI 121 (332)
T ss_pred HHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHH
Confidence 4678899999999 59999999987543 245788999886 57888875433 388999999999999999999
Q ss_pred hhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC----ceecccccceeCCccccc-CCcccchhhhhHHH
Q 040501 78 HHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN----WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGV 152 (228)
Q Consensus 78 h~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~ 152 (228)
|+. |++|+||||+||+++.++.++|+|||.+......... .....++..|+|||.+.+ ..++.++|+||+|+
T Consensus 122 H~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv 198 (332)
T cd07857 122 HSA---NVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGC 198 (332)
T ss_pred HhC---CcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHH
Confidence 999 9999999999999999999999999998765432211 123457888999998765 45788999999999
Q ss_pred HHHHHHhCCCCccccccccC---------CCchhhhhhhcC------------CCCCCCchhhhhhHHHHHHHHHHhhcc
Q 040501 153 LALEVIKGKHPRDFLSNVSS---------SNPNILVNEMLD------------PRLPPLSVDIRGKVISIMEVAFLCLDN 211 (228)
Q Consensus 153 ~l~~~~~g~~p~~~~~~~~~---------~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~li~~~l~~ 211 (228)
++|++++|.+||........ .........+.. .............+..+.+++.+||+.
T Consensus 199 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 278 (332)
T cd07857 199 ILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAF 278 (332)
T ss_pred HHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccC
Confidence 99999999999864321100 000000000000 000011111123456789999999999
Q ss_pred CCCCCCCHHHHHH
Q 040501 212 NPESRPNMQTICQ 224 (228)
Q Consensus 212 ~p~~Rpt~~~il~ 224 (228)
||.+|||+.++++
T Consensus 279 ~P~~R~t~~~ll~ 291 (332)
T cd07857 279 DPTKRISVEEALE 291 (332)
T ss_pred CcccCCCHHHHhc
Confidence 9999999999874
No 360
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.6e-35 Score=220.58 Aligned_cols=192 Identities=22% Similarity=0.224 Sum_probs=153.3
Q ss_pred HHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCC
Q 040501 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPP 84 (228)
Q Consensus 5 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~ 84 (228)
+..|...+....||||+++++++......+++|||+.+++|.+++.... .++...+..++.|++.||.|||+. |
T Consensus 32 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~ 105 (237)
T cd05576 32 YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFL---NIPEECVKRWAAEMVVALDALHRE---G 105 (237)
T ss_pred hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 3455555555679999999999999999999999999999999987543 288899999999999999999999 9
Q ss_pred eeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCc
Q 040501 85 IVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPR 164 (228)
Q Consensus 85 i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~ 164 (228)
++|+||||+||+++.++.++++|||.+...... .....++..|+|||.+.+..++.++|+||+|+++|+|++|..|+
T Consensus 106 i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~ 182 (237)
T cd05576 106 IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLV 182 (237)
T ss_pred eeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchh
Confidence 999999999999999999999999987655432 12234566799999988888899999999999999999999886
Q ss_pred cccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCH
Q 040501 165 DFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM 219 (228)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 219 (228)
....... ........+ ...+..+.++|.+||+.||.+|||+
T Consensus 183 ~~~~~~~--------~~~~~~~~~------~~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 183 ECHPSGI--------NTHTTLNIP------EWVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred hcCchhc--------ccccccCCc------ccCCHHHHHHHHHHccCCHHHhcCC
Confidence 4221100 000000111 1245578899999999999999996
No 361
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.2e-35 Score=229.58 Aligned_cols=215 Identities=22% Similarity=0.320 Sum_probs=156.5
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeec--------CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHA--------RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 75 (228)
.+.+|++++++++|+||+++++.+... ..+++++||+.+ ++...+.... ..+++.++..++.|+++||.
T Consensus 53 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~ 129 (311)
T cd07866 53 TALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGIN 129 (311)
T ss_pred hHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHH
Confidence 567899999999999999999887543 357999999865 5665554322 34899999999999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-----------ceecccccceeCCcccccC-Cccc
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-----------WTEFAGTYGYVAPELAYTM-KVTA 143 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~-~~~~ 143 (228)
|||+. |++|+||+|+||+++.++.++|+|||++......... .....+++.|+|||.+.+. .++.
T Consensus 130 ~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 206 (311)
T cd07866 130 YLHEN---HILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTT 206 (311)
T ss_pred HHHhC---CeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCc
Confidence 99999 9999999999999999999999999988765432211 1123456789999987654 4788
Q ss_pred chhhhhHHHHHHHHHhCCCCccccccccCCCchhh---------------hhh----hcCCCCC-CCchhhhhhHHHHHH
Q 040501 144 KCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL---------------VNE----MLDPRLP-PLSVDIRGKVISIME 203 (228)
Q Consensus 144 ~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~---------------~~~----~~~~~~~-~~~~~~~~~~~~~~~ 203 (228)
++|+||+|+++|+|++|.+||.............. ... ......+ ............+.+
T Consensus 207 ~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (311)
T cd07866 207 AVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLD 286 (311)
T ss_pred hhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHH
Confidence 99999999999999999999854322110000000 000 0000000 000011223356889
Q ss_pred HHHHhhccCCCCCCCHHHHHH
Q 040501 204 VAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 204 li~~~l~~~p~~Rpt~~~il~ 224 (228)
++.+||+.||.+|||+.++++
T Consensus 287 ~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 287 LLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHcccCcccCcCHHHHhc
Confidence 999999999999999999875
No 362
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.3e-35 Score=232.50 Aligned_cols=211 Identities=21% Similarity=0.340 Sum_probs=159.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCe------EEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARH------SFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (228)
+.+.+|+.+++.++|+|++++.+++..... .++|+|++ +++|.+++.. ..+++..++.++.|++.|+.+
T Consensus 59 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~ 133 (343)
T cd07851 59 KRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKY 133 (343)
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999988865544 89999998 5689888864 238999999999999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLAL 155 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~ 155 (228)
||+. |++|+||+|+||+++.++.++|+|||.+...... .....++..|+|||.+.+ ..++.++|+||||+++|
T Consensus 134 LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~ 207 (343)
T cd07851 134 IHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 207 (343)
T ss_pred HHHC---CeecCCCCHHHeEECCCCCEEEcccccccccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHH
Confidence 9999 9999999999999999999999999998765432 223456788999998765 35788999999999999
Q ss_pred HHHhCCCCccccccccCCC---------chhhhhhh------------cCCCCCCCchhhhhhHHHHHHHHHHhhccCCC
Q 040501 156 EVIKGKHPRDFLSNVSSSN---------PNILVNEM------------LDPRLPPLSVDIRGKVISIMEVAFLCLDNNPE 214 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~~~---------~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 214 (228)
++++|..||.......... ........ ...............+..+.++|.+||+.+|.
T Consensus 208 elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~ 287 (343)
T cd07851 208 ELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPD 287 (343)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChh
Confidence 9999999986432211000 00000000 00000000011123466789999999999999
Q ss_pred CCCCHHHHHH
Q 040501 215 SRPNMQTICQ 224 (228)
Q Consensus 215 ~Rpt~~~il~ 224 (228)
+|||+.++++
T Consensus 288 ~Rpt~~ell~ 297 (343)
T cd07851 288 KRITAAEALA 297 (343)
T ss_pred hCCCHHHHhc
Confidence 9999999875
No 363
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4.4e-35 Score=229.42 Aligned_cols=211 Identities=22% Similarity=0.334 Sum_probs=159.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecC------eEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (228)
+.+.+|++++++++|+||+++++++.... ..++|+|++ +++|.+++... .+++..+..++.|++.|+.|
T Consensus 59 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~al~~ 133 (343)
T cd07880 59 KRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKHE----KLSEDRIQFLVYQMLKGLKY 133 (343)
T ss_pred HHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHH
Confidence 45788999999999999999999986543 458999998 66888887532 38899999999999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLAL 155 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~ 155 (228)
||+. |++|+||+|+||+++.++.++++|||.+...... .....+++.|++||.+.+ ..++.++|+||||+++|
T Consensus 134 LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~ 207 (343)
T cd07880 134 IHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMA 207 (343)
T ss_pred HHhC---CeecCCCCHHHEEEcCCCCEEEeecccccccccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 9999 9999999999999999999999999998765322 223456788999998876 35788999999999999
Q ss_pred HHHhCCCCccccccccC---------CCchhhhhhhc------------CCCCCCCchhhhhhHHHHHHHHHHhhccCCC
Q 040501 156 EVIKGKHPRDFLSNVSS---------SNPNILVNEML------------DPRLPPLSVDIRGKVISIMEVAFLCLDNNPE 214 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~---------~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 214 (228)
++++|..||........ .........+. ..............+..+.++|.+||+.||.
T Consensus 208 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~ 287 (343)
T cd07880 208 EMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAE 287 (343)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChh
Confidence 99999999864321100 00000000000 0000000111124455688999999999999
Q ss_pred CCCCHHHHHH
Q 040501 215 SRPNMQTICQ 224 (228)
Q Consensus 215 ~Rpt~~~il~ 224 (228)
+|||+.++++
T Consensus 288 ~R~t~~~~l~ 297 (343)
T cd07880 288 SRITAAEALA 297 (343)
T ss_pred hCCCHHHHhc
Confidence 9999999874
No 364
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.2e-34 Score=221.30 Aligned_cols=215 Identities=22% Similarity=0.354 Sum_probs=162.4
Q ss_pred HHHHHHHHHhccC-CCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 4 EFLREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 4 ~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
...+|+..+++++ |+|++++++++..+...|+||||+ +++|.+.+.... ...+++.++..++.|++.+|.|||+.
T Consensus 43 ~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~-- 118 (283)
T cd07830 43 MNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH-- 118 (283)
T ss_pred HHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC--
Confidence 3467999999998 999999999999999999999999 678888776543 23489999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHHHHHHhCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|++|+||+|+||+++.++.++|+|||.+....... ......++..|+|||.+.+ ..++.++|+||||++++++++|.
T Consensus 119 -~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~ 196 (283)
T cd07830 119 -GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP-PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLR 196 (283)
T ss_pred -CcccCCCChhhEEEcCCCCEEEeecccceeccCCC-CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCC
Confidence 99999999999999999999999999987654322 2223456788999998754 45788999999999999999999
Q ss_pred CCccccccccCCCc---------------hhhhhhhcCCCCCCC-----chhhhhhHHHHHHHHHHhhccCCCCCCCHHH
Q 040501 162 HPRDFLSNVSSSNP---------------NILVNEMLDPRLPPL-----SVDIRGKVISIMEVAFLCLDNNPESRPNMQT 221 (228)
Q Consensus 162 ~p~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 221 (228)
.||........... ............+.. .......+..+.+++.+||..+|.+|||+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~e 276 (283)
T cd07830 197 PLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQ 276 (283)
T ss_pred CccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHH
Confidence 99864322110000 000000000000000 0001122456889999999999999999999
Q ss_pred HHH
Q 040501 222 ICQ 224 (228)
Q Consensus 222 il~ 224 (228)
+++
T Consensus 277 i~~ 279 (283)
T cd07830 277 ALQ 279 (283)
T ss_pred Hhh
Confidence 875
No 365
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=1.2e-34 Score=216.12 Aligned_cols=210 Identities=30% Similarity=0.460 Sum_probs=171.3
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+.+|++.+++++|+|++++++++......++++|++.+++|.+++..... ++..+++.++.+++.++.+||+.
T Consensus 31 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~~- 106 (244)
T smart00220 31 RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGR---LSEDEARFYARQILSALEYLHSN- 106 (244)
T ss_pred HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHHc-
Confidence 46789999999999999999999999998999999999999999999875443 78899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
+++|+||+|+||+++.++.++++|||.+....... ......++..|++||.+.+..++.++|+|++|++++++++|.
T Consensus 107 --~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~ 183 (244)
T smart00220 107 --GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGK 183 (244)
T ss_pred --CeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999988765432 223345678899999998888888999999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.||... ................ ........+.++.+++.+||..+|.+||++.++++
T Consensus 184 ~p~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 184 PPFPGD-----DQLLELFKKIGKPKPP-FPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred CCCCCC-----CcHHHHHHHHhccCCC-CccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 997542 1122222222222221 11111115567899999999999999999999986
No 366
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.1e-34 Score=227.43 Aligned_cols=211 Identities=21% Similarity=0.352 Sum_probs=157.5
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec------CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA------RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (228)
+.+.+|+.++++++|+||+++++++... ...|++++++ +++|.+++... .+++..++.++.|++.|++|
T Consensus 61 ~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~ 135 (345)
T cd07877 61 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKY 135 (345)
T ss_pred HHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHH
Confidence 4577899999999999999999988543 3478888877 67888877543 38889999999999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLAL 155 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~ 155 (228)
||+. |++|+||+|+||+++.++.++|+|||++...... .....++..|+|||.+.+ ..++.++|+||+|+++|
T Consensus 136 LH~~---~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~ 209 (345)
T cd07877 136 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 209 (345)
T ss_pred HHHC---CeeecCCChHHEEEcCCCCEEEeccccccccccc---ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHH
Confidence 9999 9999999999999999999999999998754322 233456788999998766 45788999999999999
Q ss_pred HHHhCCCCccccccccCC---------CchhhhhhhcC----------CCCCC--CchhhhhhHHHHHHHHHHhhccCCC
Q 040501 156 EVIKGKHPRDFLSNVSSS---------NPNILVNEMLD----------PRLPP--LSVDIRGKVISIMEVAFLCLDNNPE 214 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~~---------~~~~~~~~~~~----------~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~ 214 (228)
++++|..||......... ........... +..+. ........+..+.++|.+||+.||.
T Consensus 210 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~ 289 (345)
T cd07877 210 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 289 (345)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChh
Confidence 999999998543221100 00000000000 00000 0001113455688999999999999
Q ss_pred CCCCHHHHHH
Q 040501 215 SRPNMQTICQ 224 (228)
Q Consensus 215 ~Rpt~~~il~ 224 (228)
+|||+.++++
T Consensus 290 ~R~t~~e~l~ 299 (345)
T cd07877 290 KRITAAQALA 299 (345)
T ss_pred hcCCHHHHhc
Confidence 9999999875
No 367
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1e-34 Score=227.36 Aligned_cols=210 Identities=22% Similarity=0.377 Sum_probs=156.2
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec------CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA------RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (228)
..+.+|+++++.++|+||+++++++... ...|+++|++.. +|..+.. ..++...+..++.|++.|++|
T Consensus 59 ~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~ 132 (342)
T cd07879 59 KRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKY 132 (342)
T ss_pred hHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHH
Confidence 3578899999999999999999998654 346899999864 6665542 237889999999999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhhHHHHHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLAL 155 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~ 155 (228)
||+. |++||||+|+||+++.++.++|+|||++...... .....++..|+|||.+.+ ..++.++|+||||+++|
T Consensus 133 LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~ 206 (342)
T cd07879 133 IHSA---GIIHRDLKPGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMA 206 (342)
T ss_pred HHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC---CCCceeeecccChhhhcCccccCchHHHHHHHHHHH
Confidence 9999 9999999999999999999999999998754321 223456788999998866 45788999999999999
Q ss_pred HHHhCCCCccccccccCCCc---------hhh--------hhhhcC--CCCCC--CchhhhhhHHHHHHHHHHhhccCCC
Q 040501 156 EVIKGKHPRDFLSNVSSSNP---------NIL--------VNEMLD--PRLPP--LSVDIRGKVISIMEVAFLCLDNNPE 214 (228)
Q Consensus 156 ~~~~g~~p~~~~~~~~~~~~---------~~~--------~~~~~~--~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~ 214 (228)
++++|+.||........... ... ...... +..+. ........+..+.++|.+||+.||.
T Consensus 207 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~ 286 (342)
T cd07879 207 EMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVD 286 (342)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChh
Confidence 99999999864321110000 000 000000 00000 0011123455688999999999999
Q ss_pred CCCCHHHHHH
Q 040501 215 SRPNMQTICQ 224 (228)
Q Consensus 215 ~Rpt~~~il~ 224 (228)
+|||+.+++.
T Consensus 287 ~R~~~~e~l~ 296 (342)
T cd07879 287 KRLTATEALE 296 (342)
T ss_pred hCcCHHHHhc
Confidence 9999999984
No 368
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=4.3e-35 Score=229.40 Aligned_cols=214 Identities=24% Similarity=0.365 Sum_probs=155.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec--------------CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--------------RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIK 68 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~--------------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 68 (228)
+.+.+|++++++++|+||+++++.+... ...|+++||+. ++|.+++... .++...+..++.
T Consensus 47 ~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~~~ 121 (342)
T cd07854 47 KHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLFMY 121 (342)
T ss_pred HHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHHHH
Confidence 4678999999999999999999776543 35789999997 4888777532 378899999999
Q ss_pred HHHHHHHHhhhCCCCCeeecCCCCCceEEcC-CCceEEeecccccccCCCCCC---ceecccccceeCCccccc-CCccc
Q 040501 69 GIAHALSYLHHDCIPPIVHRDISSKNVLLDL-EYEAHVSDFGIAKFIQPDSSN---WTEFAGTYGYVAPELAYT-MKVTA 143 (228)
Q Consensus 69 ~l~~~l~~lh~~~~~~i~h~di~p~nil~~~-~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~ 143 (228)
|++.|+.|||+. |++|+||||+||+++. ++.++++|||.+......... .....++..|+|||.+.+ ..++.
T Consensus 122 qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 198 (342)
T cd07854 122 QLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTK 198 (342)
T ss_pred HHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCc
Confidence 999999999999 9999999999999975 567899999998765322111 122346778999997654 45788
Q ss_pred chhhhhHHHHHHHHHhCCCCccccccccCCC-------------chhh---hhhhcC--CCCCC--CchhhhhhHHHHHH
Q 040501 144 KCDVYSFGVLALEVIKGKHPRDFLSNVSSSN-------------PNIL---VNEMLD--PRLPP--LSVDIRGKVISIME 203 (228)
Q Consensus 144 ~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~-------------~~~~---~~~~~~--~~~~~--~~~~~~~~~~~~~~ 203 (228)
++|||||||++|+|++|..||.......... .... ...... ..... ........+.++.+
T Consensus 199 ~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (342)
T cd07854 199 AIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALD 278 (342)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHH
Confidence 9999999999999999999985332110000 0000 000000 00000 00111234567889
Q ss_pred HHHHhhccCCCCCCCHHHHHH
Q 040501 204 VAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 204 li~~~l~~~p~~Rpt~~~il~ 224 (228)
++.+||+.||.+|||+.++++
T Consensus 279 li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 279 FLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHHHHhCCCchhccCHHHHhC
Confidence 999999999999999999974
No 369
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-35 Score=231.88 Aligned_cols=162 Identities=34% Similarity=0.514 Sum_probs=143.1
Q ss_pred ChHHHHHHHHHHhccCCCccceeeeeeeec------CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHH
Q 040501 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHA------RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHAL 74 (228)
Q Consensus 1 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 74 (228)
++++..+|++++++++|+|||+++++=++. ....++||||+||+|...+.+......+++.+.+.++.++..|+
T Consensus 54 ~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al 133 (732)
T KOG4250|consen 54 PRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSAL 133 (732)
T ss_pred hHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHH
Confidence 467889999999999999999999886443 35789999999999999999877777799999999999999999
Q ss_pred HHhhhCCCCCeeecCCCCCceEEcC--CC--ceEEeecccccccCCCCCCceecccccceeCCccccc-CCcccchhhhh
Q 040501 75 SYLHHDCIPPIVHRDISSKNVLLDL--EY--EAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYS 149 (228)
Q Consensus 75 ~~lh~~~~~~i~h~di~p~nil~~~--~~--~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws 149 (228)
.|||.. ||+||||||.||++.. +| .-||+|||.++...++. ...+..||..|++||.... ..|+..+|.||
T Consensus 134 ~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS 209 (732)
T KOG4250|consen 134 RHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWS 209 (732)
T ss_pred HHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhh
Confidence 999999 9999999999999843 33 35999999999877554 6677899999999999884 67888999999
Q ss_pred HHHHHHHHHhCCCCccc
Q 040501 150 FGVLALEVIKGKHPRDF 166 (228)
Q Consensus 150 lG~~l~~~~~g~~p~~~ 166 (228)
+||++|+.+||..||..
T Consensus 210 ~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 210 FGVTLYECATGELPFIP 226 (732)
T ss_pred hhhHHHHHhccCCCCCc
Confidence 99999999999999853
No 370
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.3e-34 Score=210.28 Aligned_cols=217 Identities=21% Similarity=0.320 Sum_probs=162.2
Q ss_pred HHHHHHHHHhccCCCccceeeeeeee-cCeEEEEEEeecCCChhhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTH-ARHSFLVYEYLENGSLSVILNND--TSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
+.-+|+.+++.++|+|++.++.+|-. +..+|+++||... +|...|+-+ ...+.++...+..++.|++.|+.|||+.
T Consensus 73 SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N 151 (438)
T KOG0666|consen 73 SACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN 151 (438)
T ss_pred HHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh
Confidence 45689999999999999999999966 7899999999976 676666532 2234588899999999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCC----CceEEeecccccccCCCCCC---ceecccccceeCCcccccCC-cccchhhhhHHH
Q 040501 81 CIPPIVHRDISSKNVLLDLE----YEAHVSDFGIAKFIQPDSSN---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGV 152 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~----~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~ 152 (228)
=+.||||||.||++..+ |.+||.|+|+++.....-.. .....-|..|+|||.+.|.. |+.+.|+|++||
T Consensus 152 ---WvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGC 228 (438)
T KOG0666|consen 152 ---WVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGC 228 (438)
T ss_pred ---heeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHH
Confidence 89999999999999887 99999999999987654433 22345688999999988875 899999999999
Q ss_pred HHHHHHhCCCCccccccccCCC-c--hhhhhhhcC-------CCCCC------C-------------c-------hhhhh
Q 040501 153 LALEVIKGKHPRDFLSNVSSSN-P--NILVNEMLD-------PRLPP------L-------------S-------VDIRG 196 (228)
Q Consensus 153 ~l~~~~~g~~p~~~~~~~~~~~-~--~~~~~~~~~-------~~~~~------~-------------~-------~~~~~ 196 (228)
++.|+++..+.|.....-.... + .....++.. ..++. - . .....
T Consensus 229 IfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~ 308 (438)
T KOG0666|consen 229 IFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKV 308 (438)
T ss_pred HHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcC
Confidence 9999999888764322211110 0 001111110 00000 0 0 00111
Q ss_pred hHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 197 KVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 197 ~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.++.-.+|+.+||..||.+|.|+.+.++
T Consensus 309 k~~~a~~LL~klL~yDP~kRIta~qAle 336 (438)
T KOG0666|consen 309 KDPSALDLLQKLLTYDPIKRITAEQALE 336 (438)
T ss_pred CCchHHHHHHHHhccCchhhccHHHHhc
Confidence 2233679999999999999999999886
No 371
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=216.61 Aligned_cols=212 Identities=21% Similarity=0.321 Sum_probs=161.2
Q ss_pred hHHHHHHHHHHhccC-C-C----ccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 040501 2 KKEFLREITVLTEIR-H-R----NIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~-h-~----~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 75 (228)
|++.+-|+++|+++. + | -++.+.++|...++.+||+|.+ |.++++++..+.. .+++...+..+++|++++++
T Consensus 129 reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y-~~fpi~~ir~m~~QL~~sv~ 206 (415)
T KOG0671|consen 129 REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNY-IPFPIDHIRHMGYQLLESVA 206 (415)
T ss_pred hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCc-cccchHHHHHHHHHHHHHHH
Confidence 456678999999993 2 2 3577788899999999999988 5689999987654 34899999999999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcC--------------------CCceEEeecccccccCCCCCCceecccccceeCCcc
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDL--------------------EYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPEL 135 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~--------------------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~ 135 (228)
+||+. +++|-||||+||++.+ +..++++|||.++...... .....|..|+|||+
T Consensus 207 fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h---s~iVsTRHYRAPEV 280 (415)
T KOG0671|consen 207 FLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH---STIVSTRHYRAPEV 280 (415)
T ss_pred HHHhc---ceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc---ceeeeccccCCchh
Confidence 99999 9999999999999832 2358999999998754332 44677889999999
Q ss_pred cccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCC---------------------------
Q 040501 136 AYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLP--------------------------- 188 (228)
Q Consensus 136 ~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 188 (228)
+.+.+++.++||||+||+++|+.+|...|+.-.... -..+.++++.+.+.
T Consensus 281 iLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E---HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~ 357 (415)
T KOG0671|consen 281 ILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLE---HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGK 357 (415)
T ss_pred eeccCcCCccCceeeeeEEEEeeccceecccCCcHH---HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCcccccccc
Confidence 999999999999999999999999999876422110 00111111111000
Q ss_pred ---------CC---chhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 189 ---------PL---SVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 189 ---------~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+. ..........+.+|+++||..||.+|+|+.|++.
T Consensus 358 ~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 358 SKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred chhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 00 0000112335899999999999999999999875
No 372
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=228.67 Aligned_cols=201 Identities=25% Similarity=0.371 Sum_probs=170.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+.+..|-.+|..++.|.|++++-.|.++..+|++||-|-||.+-..++..++ ++..++..++..+++|+.|||++
T Consensus 465 eHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~---Fdd~tarF~~acv~EAfeYLH~k-- 539 (732)
T KOG0614|consen 465 EHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGS---FDDYTARFYVACVLEAFEYLHRK-- 539 (732)
T ss_pred HHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCC---cccchhhhhHHHHHHHHHHHHhc--
Confidence 3456788999999999999999999999999999999999999999887665 78888899999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
||++|||||+|.+++.+|-+||.|||.++.++.....|+ ++|||+|.|||++.....+.++|.||||+++||+++|.+
T Consensus 540 -~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwT-FcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~p 617 (732)
T KOG0614|consen 540 -GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWT-FCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSP 617 (732)
T ss_pred -CceeccCChhheeeccCCceEEeehhhHHHhccCCceee-ecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999987776665 799999999999999999999999999999999999999
Q ss_pred CccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCC
Q 040501 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPN 218 (228)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 218 (228)
||...+++. ....++.+.- .... .+.......++|++....+|.+|.-
T Consensus 618 PFs~~dpmk------tYn~ILkGid-~i~~-Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 618 PFSGVDPMK------TYNLILKGID-KIEF-PRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred CCCCCchHH------HHHHHHhhhh-hhhc-ccccchhHHHHHHHHHhcCcHhhhc
Confidence 987655443 3232322211 0000 1234445679999999999999965
No 373
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=234.30 Aligned_cols=208 Identities=25% Similarity=0.373 Sum_probs=161.0
Q ss_pred HHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCC-CCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 4 EFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSA-EELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 4 ~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
-..+|++.|+.- +||||+++++.=.++...||..|.|.. +|.+++...... ....-...+..+.|+++||++||+.
T Consensus 548 ~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl- 625 (903)
T KOG1027|consen 548 FAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL- 625 (903)
T ss_pred HHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc-
Confidence 357899999988 699999999998899999999999965 999999764111 1111134567899999999999999
Q ss_pred CCCeeecCCCCCceEEcC---C--CceEEeecccccccCCCCCC---ceecccccceeCCcccccCCcccchhhhhHHHH
Q 040501 82 IPPIVHRDISSKNVLLDL---E--YEAHVSDFGIAKFIQPDSSN---WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVL 153 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~---~--~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~ 153 (228)
+|+||||||.||+++. + .+++|+|||+++........ .....|+..|+|||++.....+.++|||||||+
T Consensus 626 --~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCv 703 (903)
T KOG1027|consen 626 --KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCV 703 (903)
T ss_pred --ccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCce
Confidence 9999999999999976 3 45789999999988765544 234678999999999999888889999999999
Q ss_pred HHHHHhC-CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 154 ALEVIKG-KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 154 l~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
+|+.++| ..||+.... ....++............... +..+||.+|++++|..||++.+++.
T Consensus 704 fyYvltgG~HpFGd~~~--------R~~NIl~~~~~L~~L~~~~d~-eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 704 FYYVLTGGSHPFGDSLE--------RQANILTGNYTLVHLEPLPDC-EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred EEEEecCCccCCCchHH--------hhhhhhcCccceeeeccCchH-HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 9999985 999874322 222233322221111111111 6789999999999999999999874
No 374
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=229.19 Aligned_cols=211 Identities=24% Similarity=0.389 Sum_probs=177.5
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeee-----cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTH-----ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (228)
+.+..|.++++.+ .|||++.++++|.- ++.+|+|||||++|+..|+++... +..+.+..+..+++.++.|+.+
T Consensus 60 eEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~H 138 (953)
T KOG0587|consen 60 EEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAH 138 (953)
T ss_pred HHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHH
Confidence 5678899999998 69999999999853 468999999999999999998755 5668999999999999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC-----CcccchhhhhHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-----KVTAKCDVYSFG 151 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~DiwslG 151 (228)
||.. .++|||||-.||+++.++.+|++|||.+...+.......+..|++.|||||++... .|+..+|+||||
T Consensus 139 LH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLG 215 (953)
T KOG0587|consen 139 LHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLG 215 (953)
T ss_pred Hhhc---ceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhcc
Confidence 9999 99999999999999999999999999998887766667788999999999998654 367789999999
Q ss_pred HHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 152 VLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 152 ~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
++..||..|.+|+-.+.. ....-.+.+.. ++....+..-+.++.++|..||.+|..+||+..++++
T Consensus 216 ITaIEladG~PPl~DmHP------mraLF~IpRNP-PPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 216 ITAIEMAEGAPPLCDMHP------MRALFLIPRNP-PPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ceeehhcCCCCCccCcch------hhhhccCCCCC-CccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 999999999999654433 22333332222 2333334566778999999999999999999999875
No 375
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.3e-32 Score=231.09 Aligned_cols=104 Identities=30% Similarity=0.444 Sum_probs=96.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+..|+.++..++|+||+++++.+......|+||||+.+++|.+++.... .++...++.++.|++.||.|||+.
T Consensus 49 ~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~-- 123 (669)
T cd05610 49 HQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRH-- 123 (669)
T ss_pred HHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 567889999999999999999999999999999999999999999987543 378889999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeeccccc
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAK 112 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~ 112 (228)
||+|+||||+|||++.++.++|+|||++.
T Consensus 124 -gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 124 -GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred -CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999999999999999999875
No 376
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-35 Score=211.13 Aligned_cols=215 Identities=24% Similarity=0.334 Sum_probs=167.8
Q ss_pred hHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhc--CCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 040501 2 KKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNN--DTSAEELGWSRRINVIKGIAHALSYLH 78 (228)
Q Consensus 2 ~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~lh 78 (228)
++++..|.+...+- ++|+||++++.+...+..||.||.++ .+++.+... .-....+++...-.+....+.||.||.
T Consensus 106 q~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK 184 (361)
T KOG1006|consen 106 QKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLK 184 (361)
T ss_pred HHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHH
Confidence 56788888876665 79999999999999999999999995 466554432 111223788888888888999999998
Q ss_pred hCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccC--CcccchhhhhHHHHHHH
Q 040501 79 HDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM--KVTAKCDVYSFGVLALE 156 (228)
Q Consensus 79 ~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~l~~ 156 (228)
..- .|+|||+||+||+++..|.+||+|||++...-. +...+...|-..|+|||-+... .|+.+||+||||+++||
T Consensus 185 ~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~-SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~E 261 (361)
T KOG1006|consen 185 EEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD-SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYE 261 (361)
T ss_pred HHh--hhhhccCChhheEEecCCCEeeecccchHhHHH-HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEee
Confidence 763 899999999999999999999999999876532 2223445677889999988654 48899999999999999
Q ss_pred HHhCCCCccccccccCCCchhhhhhhcCCCCCCC--chhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 157 VIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPL--SVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
+.+|..||..... ..+.+..+..+..+.. ......++..+..+|.-||.+|-..||.+.++++.
T Consensus 262 vAtG~fPyr~w~s-----vfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 262 VATGNFPYRKWDS-----VFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred eecCCCCcchHHH-----HHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 9999999875443 2334444444554433 23335678889999999999999999999998753
No 377
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-33 Score=199.95 Aligned_cols=214 Identities=22% Similarity=0.353 Sum_probs=159.8
Q ss_pred HHHHHHHHhccCCCccceeeeeeee--------cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 040501 5 FLREITVLTEIRHRNIVKFYGFCTH--------ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 5 ~~~E~~~l~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (228)
..+|+++|+.++|+|++.+++.|.. ...+|+||++|.. +|.-++.... ..++...+..++.++++||.|
T Consensus 63 alreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~ 139 (376)
T KOG0669|consen 63 ALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEH-DLAGLLSNRK--VRFSLSEIKKVMKGLMNGLYY 139 (376)
T ss_pred HHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhh-hHHHHhcCcc--ccccHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999998843 2358999999976 6777776442 338899999999999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC----ceecccccceeCCcccccC-CcccchhhhhHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN----WTEFAGTYGYVAPELAYTM-KVTAKCDVYSFG 151 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG 151 (228)
+|+. .|+|||+||+|++++.+|.++|.|||+++........ .+....|..|++||.+.|. .++++.|+|+.|
T Consensus 140 iHr~---kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAg 216 (376)
T KOG0669|consen 140 IHRN---KILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAG 216 (376)
T ss_pred HHHh---hHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHH
Confidence 9999 9999999999999999999999999999655433222 3344568899999988776 589999999999
Q ss_pred HHHHHHHhCCCCcccccccc------------------CCCchhhhhhhcCCCCCCCch-hhhhh------HHHHHHHHH
Q 040501 152 VLALEVIKGKHPRDFLSNVS------------------SSNPNILVNEMLDPRLPPLSV-DIRGK------VISIMEVAF 206 (228)
Q Consensus 152 ~~l~~~~~g~~p~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~li~ 206 (228)
|++.+|+++.+-++...+.. ..+.......+..+.++.... ...+. ..+..+++.
T Consensus 217 CimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle 296 (376)
T KOG0669|consen 217 CIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLE 296 (376)
T ss_pred HHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHH
Confidence 99999999988865432211 011111112221111111100 01111 125679999
Q ss_pred HhhccCCCCCCCHHHHHH
Q 040501 207 LCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 207 ~~l~~~p~~Rpt~~~il~ 224 (228)
++|..||.+|++++++++
T Consensus 297 ~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 297 KLLKLDPTKRIDADQALN 314 (376)
T ss_pred HHhccCcccCcchHhhhc
Confidence 999999999999999875
No 378
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-34 Score=207.31 Aligned_cols=212 Identities=22% Similarity=0.333 Sum_probs=162.1
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecC------eEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (228)
++..+|..++..++|+||++++++|.... ..|+|||++. .+|...+. ..++-.++..++.|++.|++|
T Consensus 60 kra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~-----~elDH~tis~i~yq~~~~ik~ 133 (369)
T KOG0665|consen 60 KRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVIL-----MELDHETISYILYQMLCGIKH 133 (369)
T ss_pred hhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHH-----HhcchHHHHHHHHHHHHHHHH
Confidence 56789999999999999999999997543 5799999996 47777765 226778889999999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALE 156 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 156 (228)
||+. ||+||||||+||++..++.+||.|||++...+.. ...+....+..|+|||++.+..+.+.+||||+||++.|
T Consensus 134 lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gE 209 (369)
T KOG0665|consen 134 LHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 209 (369)
T ss_pred HHhc---ceeecccCcccceecchhheeeccchhhcccCcc-cccCchhheeeccCchheeccCCcccchhhhhhhHHHH
Confidence 9999 9999999999999999999999999999876544 33444567788999999999999999999999999999
Q ss_pred HHhCCCCccccccccCCC----------------------------chhh---hhh-hcCCCCCCCchhhhhhHHHHHHH
Q 040501 157 VIKGKHPRDFLSNVSSSN----------------------------PNIL---VNE-MLDPRLPPLSVDIRGKVISIMEV 204 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~~~----------------------------~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~l 204 (228)
|+.|...|+.....+... +... +.+ ..+..++.......-...-..++
T Consensus 210 li~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardl 289 (369)
T KOG0665|consen 210 LILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDL 289 (369)
T ss_pred HhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHH
Confidence 999999875322111100 0000 000 01111111111111223347899
Q ss_pred HHHhhccCCCCCCCHHHHHH
Q 040501 205 AFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 205 i~~~l~~~p~~Rpt~~~il~ 224 (228)
+.+||..||++|.|++++|.
T Consensus 290 l~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 290 LSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHhhccChhhcccHHHHhc
Confidence 99999999999999999885
No 379
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-33 Score=211.96 Aligned_cols=212 Identities=28% Similarity=0.415 Sum_probs=164.7
Q ss_pred HHHHHHHHHhccCCCccceeeeeee-ecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCT-HARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
...+|..+-+.|.||.||+++++|. +...+|-|+|||+|.+|+-++..+.. +++..+..++.|++.||.||... +
T Consensus 513 HAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhkl---mSEKEARSIiMQiVnAL~YLNEi-k 588 (775)
T KOG1151|consen 513 HACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKL---MSEKEARSIIMQIVNALKYLNEI-K 588 (775)
T ss_pred HHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhh---hhHHHHHHHHHHHHHHHHHHhcc-C
Confidence 4568999999999999999999996 45678899999999999999987654 89999999999999999999986 3
Q ss_pred CCeeecCCCCCceEEcCC---CceEEeecccccccCCCCCC-------ceecccccceeCCcccccC----Ccccchhhh
Q 040501 83 PPIVHRDISSKNVLLDLE---YEAHVSDFGIAKFIQPDSSN-------WTEFAGTYGYVAPELAYTM----KVTAKCDVY 148 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~---~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~----~~~~~~Diw 148 (228)
..|+|.||||.||++-.+ |.+||+|||+++.+..+... .....||..|++||++.-. +.+.++|||
T Consensus 589 pPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVW 668 (775)
T KOG1151|consen 589 PPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVW 668 (775)
T ss_pred CCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeE
Confidence 489999999999999544 88999999999988765443 2235789999999987533 468899999
Q ss_pred hHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 040501 149 SFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223 (228)
Q Consensus 149 slG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il 223 (228)
|+|+++|..+.|+.||+........-....+-....-.+|+. +.++.+..++|++||++.-.+|.++.++.
T Consensus 669 SvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K----PvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 669 SVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK----PVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred eeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC----CccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 999999999999999975433211111111111111111221 23455678999999999999998877664
No 380
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-33 Score=210.84 Aligned_cols=196 Identities=24% Similarity=0.336 Sum_probs=166.2
Q ss_pred HHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCe
Q 040501 7 REITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPI 85 (228)
Q Consensus 7 ~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i 85 (228)
.|-++|... +-|.++.+...|+.-+++|+||||+.||+|-..++.-+. +.+..+..++.+++-||-+||++ ||
T Consensus 398 ~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh~k---gI 471 (683)
T KOG0696|consen 398 VEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLHSK---GI 471 (683)
T ss_pred hhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhhcC---Ce
Confidence 344555544 568889999999999999999999999999988876554 67788899999999999999999 99
Q ss_pred eecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCcc
Q 040501 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRD 165 (228)
Q Consensus 86 ~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~ 165 (228)
++||||.+|||++.+|.+||.|||+++..-.......+++|||.|+|||++....|+.++|.||+|+++|||+.|++||+
T Consensus 472 iYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFd 551 (683)
T KOG0696|consen 472 IYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD 551 (683)
T ss_pred eeeeccccceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999876656666678999999999999999999999999999999999999999975
Q ss_pred ccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCC
Q 040501 166 FLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPN 218 (228)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 218 (228)
..+..+....+......- ....+.+..++++..|.++|.+|.-
T Consensus 552 ------GeDE~elF~aI~ehnvsy----PKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 552 ------GEDEDELFQAIMEHNVSY----PKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred ------CCCHHHHHHHHHHccCcC----cccccHHHHHHHHHHhhcCCccccC
Confidence 344556666665554432 2355667889999999999999954
No 381
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-32 Score=206.38 Aligned_cols=212 Identities=21% Similarity=0.320 Sum_probs=173.2
Q ss_pred HHHHHHHHHhccCCCccceeeeeee-ecCeEEEEEEeecCCChhhhhh-----cCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCT-HARHSFLVYEYLENGSLSVILN-----NDTSAEELGWSRRINVIKGIAHALSYL 77 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~l~~l 77 (228)
.+..|.-.+..+.|||+.++.+++. +....++++++.+.++|..++. .......++..+...++.|++.|++||
T Consensus 333 ~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hl 412 (563)
T KOG1024|consen 333 LLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHL 412 (563)
T ss_pred HHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHH
Confidence 4567777888889999999999985 4568889999999999999998 333445577888889999999999999
Q ss_pred hhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCcccchhhhhHHHHHH
Q 040501 78 HHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLAL 155 (228)
Q Consensus 78 h~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~ 155 (228)
|+. |++|.||..+|+++++.-.+||+|-.+++..-+.... ......+..||+||.+....|+.++|+||||+++|
T Consensus 413 h~~---~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllW 489 (563)
T KOG1024|consen 413 HNH---GVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLW 489 (563)
T ss_pred Hhc---CcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHH
Confidence 999 9999999999999999999999999998865433322 22234567899999999999999999999999999
Q ss_pred HHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 156 EVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 156 ~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
|+++ |+.||... ++.+...-+.++.....+ .++++++..++.-||+..|++||+.+++..=|.
T Consensus 490 ELmtlg~~PyaeI------DPfEm~~ylkdGyRlaQP---~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLs 553 (563)
T KOG1024|consen 490 ELMTLGKLPYAEI------DPFEMEHYLKDGYRLAQP---FNCPDELFTVMACCWALLPEERPSFSQLVICLS 553 (563)
T ss_pred HHHhcCCCCcccc------CHHHHHHHHhccceecCC---CCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence 9997 99997544 344455555444433222 478889999999999999999999999987664
No 382
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=228.84 Aligned_cols=211 Identities=25% Similarity=0.411 Sum_probs=177.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+++.+|+..|.++.|||++++++++..+. +-||++|++.|+|.++++.+... +..+..+.|+.||++|+.|||.+
T Consensus 743 ~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~--igsq~lLnw~~QIAkgM~YLe~q-- 817 (1177)
T KOG1025|consen 743 IELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDN--IGSQDLLNWCYQIAKGMKYLEEQ-- 817 (1177)
T ss_pred HHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhcc--ccHHHHHHHHHHHHHHHHHHHhc--
Confidence 56889999999999999999999998765 77899999999999999876544 88899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecc--cccceeCCcccccCCcccchhhhhHHHHHHHHHh-
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA--GTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~--~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~- 159 (228)
+++||||-.+|||+.....+|+.|||++.............. -++.|+|-|.+....++.++||||+|+++||++|
T Consensus 818 -rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTF 896 (1177)
T KOG1025|consen 818 -RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTF 896 (1177)
T ss_pred -chhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhc
Confidence 999999999999999999999999999998776655543333 3567999999999999999999999999999987
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
|..|++.....+..+..+...+...+ +-++.+++.++.+||..|+..||+++++.+.+.+
T Consensus 897 Ga~Py~gi~~~eI~dlle~geRLsqP---------piCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~ 956 (1177)
T KOG1025|consen 897 GAKPYDGIPAEEIPDLLEKGERLSQP---------PICTIDVYMVMVKCWMIDADSRPTFKELAEEFSR 956 (1177)
T ss_pred CCCccCCCCHHHhhHHHhccccCCCC---------CCccHHHHHHHHHHhccCcccCccHHHHHHHHHH
Confidence 99998766554444333333332222 2456679999999999999999999999887753
No 383
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-32 Score=207.52 Aligned_cols=220 Identities=27% Similarity=0.403 Sum_probs=165.9
Q ss_pred ChHHHHHHHHHHhcc--CCCccceeeeeeeec----CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHH
Q 040501 1 DKKEFLREITVLTEI--RHRNIVKFYGFCTHA----RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHAL 74 (228)
Q Consensus 1 ~~~~~~~E~~~l~~l--~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 74 (228)
|.+++.+|.++++.+ +|+||+.+++....+ ..+|+|.+|-+.|+|+|++.+.. ++....++++..++.||
T Consensus 246 dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~t----v~~~~ml~LalS~AsGL 321 (513)
T KOG2052|consen 246 DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNT----VTTEGMLKLALSIASGL 321 (513)
T ss_pred chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhcc----CCHHHHHHHHHHHhhhH
Confidence 457889999999985 999999999886433 36899999999999999998743 88899999999999999
Q ss_pred HHhhhC-----CCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCC----CceecccccceeCCcccccCC----c
Q 040501 75 SYLHHD-----CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS----NWTEFAGTYGYVAPELAYTMK----V 141 (228)
Q Consensus 75 ~~lh~~-----~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~----~ 141 (228)
+|||.. +++.|.|||||..||++.++|.+-|.|+|++........ ..+...||.+|||||++...- +
T Consensus 322 aHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~F 401 (513)
T KOG2052|consen 322 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHF 401 (513)
T ss_pred HHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhh
Confidence 999954 677899999999999999999999999999987654422 245578999999999986532 2
Q ss_pred -c-cchhhhhHHHHHHHHHh----------CCCCccccccccCCCchh-hhh----hhcCCCCCCCchhhhhhHHHHHHH
Q 040501 142 -T-AKCDVYSFGVLALEVIK----------GKHPRDFLSNVSSSNPNI-LVN----EMLDPRLPPLSVDIRGKVISIMEV 204 (228)
Q Consensus 142 -~-~~~DiwslG~~l~~~~~----------g~~p~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~l 204 (228)
+ ..+||||||+++||+.. -++||-.. +......+ +.. +.+++..+..... ......+.++
T Consensus 402 esyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~--Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s-~~~l~~m~kl 478 (513)
T KOG2052|consen 402 ESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV--VPSDPSFEEMRKVVCVQKLRPNIPNRWKS-DPALRVMAKL 478 (513)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC--CCCCCCHHHHhcceeecccCCCCCccccc-CHHHHHHHHH
Confidence 2 35899999999999973 23354221 11111111 111 1222222222111 2345568899
Q ss_pred HHHhhccCCCCCCCHHHHHHHhh
Q 040501 205 AFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 205 i~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
++.||..||..|.|+-.+.+.|.
T Consensus 479 MkeCW~~Np~aRltALriKKtl~ 501 (513)
T KOG2052|consen 479 MKECWYANPAARLTALRIKKTLA 501 (513)
T ss_pred HHHhhcCCchhhhHHHHHHHHHH
Confidence 99999999999999988877765
No 384
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-33 Score=218.19 Aligned_cols=207 Identities=23% Similarity=0.308 Sum_probs=170.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+++..|+.+|+.+.||+||.+-.-|+..++.++|||.+.|.-|.-.+..... .+++.....++.||+.||.|||-+
T Consensus 608 sqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkg--RL~er~TkFlvtQIL~ALr~LH~k-- 683 (888)
T KOG4236|consen 608 SQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKG--RLPERITKFLVTQILVALRYLHFK-- 683 (888)
T ss_pred HHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcc--cchHHHHHHHHHHHHHHHHHhhhc--
Confidence 4677899999999999999999999999999999999977666666654332 388888888999999999999999
Q ss_pred CCeeecCCCCCceEEcCC---CceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh
Q 040501 83 PPIVHRDISSKNVLLDLE---YEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
||+|+||||+||++... -.+||+|||.++.++.. .-.....|||.|+|||++....|....|+||+|+++|--++
T Consensus 684 -nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk-sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLS 761 (888)
T KOG4236|consen 684 -NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK-SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLS 761 (888)
T ss_pred -ceeeccCCchheeeccCCCCCceeeccccceeecchh-hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEec
Confidence 99999999999999654 57899999999988743 33456789999999999999999999999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il 223 (228)
|..||.-.. +..+ ++-...+.-.+..|.+.+....++|...|+..=++|-|++..+
T Consensus 762 GTFPFNEdE-----dInd---QIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 762 GTFPFNEDE-----DIND---QIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred ccccCCCcc-----chhH---HhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 999985321 1112 2222223333445778888899999999999999999887654
No 385
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-32 Score=201.71 Aligned_cols=205 Identities=24% Similarity=0.345 Sum_probs=165.6
Q ss_pred HHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 4 EFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 4 ~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.|-.+..+- +||.+|-+...|....++++|.||++||+|.-.+++.. .++++.+..+...++.||.|||++
T Consensus 296 wvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~r-- 370 (593)
T KOG0695|consen 296 WVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHER-- 370 (593)
T ss_pred hHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhc--
Confidence 446677777776 79999999999999999999999999999876665443 389999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
||+.||+|.+|++++..|.+|++|+|.++..-.+.....+++|||.|.|||++.+..|..+.|.|+||+++++|+.|+.
T Consensus 371 -giiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrs 449 (593)
T KOG0695|consen 371 -GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRS 449 (593)
T ss_pred -CeeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999876666666677899999999999999999999999999999999999999
Q ss_pred CccccccccC--CCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCC
Q 040501 163 PRDFLSNVSS--SNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPN 218 (228)
Q Consensus 163 p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 218 (228)
||+.....+. ......++-++....... +..+.....+++..|++||++|.-
T Consensus 450 pfdivgm~n~d~ntedylfqvilekqirip----rslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 450 PFDIVGMDNPDMNTEDYLFQVILEKQIRIP----RSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred CcceecCCCcccchhHHHHHHHhhhccccc----ceeehhhHHHHHHhhcCCcHHhcC
Confidence 9986542211 112223333333332110 122334567899999999999964
No 386
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.1e-32 Score=226.80 Aligned_cols=206 Identities=25% Similarity=0.279 Sum_probs=164.8
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
-|..|-.+|-.-..+=|+.++-.|.+..++|+||||++||+|-.++.... .+++..+..++..+..||..+|+.
T Consensus 121 ~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~m--- 194 (1317)
T KOG0612|consen 121 CFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSM--- 194 (1317)
T ss_pred HHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhc---
Confidence 46677778887788999999999999999999999999999999998665 389999999999999999999999
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCccccc-----CCcccchhhhhHHHHHHHH
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYT-----MKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~-----~~~~~~~DiwslG~~l~~~ 157 (228)
|+|||||||+||+++..|++||.|||.+-.+..++.. .....|||.|.+||++.. ..|+...|.||+|+++|||
T Consensus 195 gyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEM 274 (1317)
T KOG0612|consen 195 GYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEM 274 (1317)
T ss_pred cceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHH
Confidence 9999999999999999999999999999888755444 556789999999998853 3578899999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCC-CCCchhhhhhHHHHHHHHHHhhccCCCCCCC---HHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRL-PPLSVDIRGKVISIMEVAFLCLDNNPESRPN---MQTIC 223 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt---~~~il 223 (228)
+.|..||-...-+ .....+.+-.- ...+ +...++.+..+||.+.+. +|..|.. +.++.
T Consensus 275 lyG~TPFYadslv------eTY~KIm~hk~~l~FP-~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 275 LYGETPFYADSLV------ETYGKIMNHKESLSFP-DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIK 336 (1317)
T ss_pred HcCCCcchHHHHH------HHHHHHhchhhhcCCC-cccccCHHHHHHHHHHhc-ChhhhcccccHHHHH
Confidence 9999998432221 22233332211 1112 233477788899988775 5666665 55553
No 387
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=182.50 Aligned_cols=216 Identities=21% Similarity=0.310 Sum_probs=164.9
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
.+..+|+-+++.++|.||+++++..-.+..+.+|+|+|.. +|..+...... .++.+.+..++.|++.|+.++|+.
T Consensus 46 ssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq-dlkkyfdslng--~~d~~~~rsfmlqllrgl~fchsh-- 120 (292)
T KOG0662|consen 46 SSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSLNG--DLDPEIVRSFMLQLLRGLGFCHSH-- 120 (292)
T ss_pred HHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-HHHHHHHhcCC--cCCHHHHHHHHHHHHhhhhhhhhh--
Confidence 3568999999999999999999999999999999999964 78777765443 388999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCC-cccchhhhhHHHHHHHHHh-C
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK-G 160 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~~~~-g 160 (228)
++.|||+||.|.+++.+|.+|+.|||+++..+-+.........+..|++|.++.+.+ |+++.|+||.||++.|+.. |
T Consensus 121 -nvlhrdlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanag 199 (292)
T KOG0662|consen 121 -NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 199 (292)
T ss_pred -hhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcC
Confidence 999999999999999999999999999998776655555556788999999998876 7899999999999999986 6
Q ss_pred CCCccccccccCCCchh-hhhhhcCCCCC--------------CCchhhhhhHHH----HHHHHHHhhccCCCCCCCHHH
Q 040501 161 KHPRDFLSNVSSSNPNI-LVNEMLDPRLP--------------PLSVDIRGKVIS----IMEVAFLCLDNNPESRPNMQT 221 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~-~~~~~~~~~~~--------------~~~~~~~~~~~~----~~~li~~~l~~~p~~Rpt~~~ 221 (228)
.+.|+.....+...... .........+| +....+.+..+. =.+++.+.|.-+|.+|.++++
T Consensus 200 rplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaea 279 (292)
T KOG0662|consen 200 RPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEA 279 (292)
T ss_pred CCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHH
Confidence 66665432211100000 00000000001 111223333322 378999999999999999998
Q ss_pred HHH
Q 040501 222 ICQ 224 (228)
Q Consensus 222 il~ 224 (228)
.++
T Consensus 280 alq 282 (292)
T KOG0662|consen 280 ALQ 282 (292)
T ss_pred Hhc
Confidence 765
No 388
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=5.3e-32 Score=226.84 Aligned_cols=179 Identities=23% Similarity=0.405 Sum_probs=140.2
Q ss_pred EEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeeccccc
Q 040501 33 SFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAK 112 (228)
Q Consensus 33 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~ 112 (228)
+||=||||...++.++++++.... ....+|+++++|++||.|+|++ |++||||||.|||++.++.|||+|||+++
T Consensus 671 LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt 745 (1351)
T KOG1035|consen 671 LYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLAT 745 (1351)
T ss_pred EEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHHHHhC---ceeeccCCcceeEEcCCCCeeecccccch
Confidence 689999999988999888765321 4678899999999999999999 99999999999999999999999999998
Q ss_pred ccC------------------CCCCCceecccccceeCCcccccCC---cccchhhhhHHHHHHHHHhCCCCcccccccc
Q 040501 113 FIQ------------------PDSSNWTEFAGTYGYVAPELAYTMK---VTAKCDVYSFGVLALEVIKGKHPRDFLSNVS 171 (228)
Q Consensus 113 ~~~------------------~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~ 171 (228)
... .+....+...||.-|+|||.+.+.. |+.|+|+||||++++||+. ||+.
T Consensus 746 ~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~T----- 817 (1351)
T KOG1035|consen 746 DLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGT----- 817 (1351)
T ss_pred hhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCc-----
Confidence 721 0111245578999999999987654 8999999999999999983 4532
Q ss_pred CCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 172 SSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
..+....+...-++..|....-..+..+.-..+|.+|++.||.+||||.|+|+
T Consensus 818 sMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 818 SMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred hHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 22233444455455555442223333444568999999999999999999986
No 389
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=2.1e-32 Score=234.49 Aligned_cols=197 Identities=18% Similarity=0.188 Sum_probs=139.6
Q ss_pred HHhccCC-Cccceeeeee-------eecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 11 VLTEIRH-RNIVKFYGFC-------THARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 11 ~l~~l~h-~~i~~~~~~~-------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.++| +||++++++| .....++.++|++ +++|.+++.... ..++...++.++.|++.||.|||++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~-- 99 (793)
T PLN00181 25 GSKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHSQ-- 99 (793)
T ss_pred ccchhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHhC--
Confidence 3455667 7899999988 2334677888877 569999997432 3389999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCc-------------------eEEeecccccccCCCC----------------CCceecccc
Q 040501 83 PPIVHRDISSKNVLLDLEYE-------------------AHVSDFGIAKFIQPDS----------------SNWTEFAGT 127 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~-------------------~~l~df~~~~~~~~~~----------------~~~~~~~~~ 127 (228)
||+||||||+|||++..|. +|++|||++....... .......++
T Consensus 100 -gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 178 (793)
T PLN00181 100 -GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEM 178 (793)
T ss_pred -CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCC
Confidence 9999999999999965444 4555555544321000 000113467
Q ss_pred cceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHH
Q 040501 128 YGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFL 207 (228)
Q Consensus 128 ~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 207 (228)
+.|+|||++.+..++.++|||||||++|||++|..|+..... ..........+.. ..........++.+
T Consensus 179 ~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--------~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 247 (793)
T PLN00181 179 SWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR--------TMSSLRHRVLPPQ---ILLNWPKEASFCLW 247 (793)
T ss_pred cceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH--------HHHHHHHhhcChh---hhhcCHHHHHHHHH
Confidence 789999999998999999999999999999998888642111 1111111111110 01112345688899
Q ss_pred hhccCCCCCCCHHHHHH
Q 040501 208 CLDNNPESRPNMQTICQ 224 (228)
Q Consensus 208 ~l~~~p~~Rpt~~~il~ 224 (228)
||+++|.+|||+.++++
T Consensus 248 ~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 248 LLHPEPSCRPSMSELLQ 264 (793)
T ss_pred hCCCChhhCcChHHHhh
Confidence 99999999999999975
No 390
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=1e-30 Score=190.69 Aligned_cols=179 Identities=35% Similarity=0.614 Sum_probs=157.7
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++.+.+|++.++.++|++++++++++......++++|++.+++|.+++.... ..++...++.++.+++.++.+||+.
T Consensus 35 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~- 111 (215)
T cd00180 35 LEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENE--GKLSEDEILRILLQILEGLEYLHSN- 111 (215)
T ss_pred HHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 3678999999999999999999999999899999999999899999987653 2378899999999999999999999
Q ss_pred CCCeeecCCCCCceEEcC-CCceEEeecccccccCCCCCCceecccccceeCCcccccC-CcccchhhhhHHHHHHHHHh
Q 040501 82 IPPIVHRDISSKNVLLDL-EYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~~~~ 159 (228)
|++|+||+|.||+++. ++.++|+||+.+..............+...|.+||..... ..+.++|+|++|++++++
T Consensus 112 --~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-- 187 (215)
T cd00180 112 --GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-- 187 (215)
T ss_pred --CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--
Confidence 9999999999999999 8999999999988765443223334567889999988776 778899999999999998
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHh
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 226 (228)
..+.+++.+|+..||.+||++.++++.+
T Consensus 188 ---------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ---------------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ---------------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 4688999999999999999999998753
No 391
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=6.5e-31 Score=208.22 Aligned_cols=193 Identities=20% Similarity=0.265 Sum_probs=151.5
Q ss_pred HHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCC
Q 040501 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPP 84 (228)
Q Consensus 5 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~ 84 (228)
++.|-.||..-.++-||+++-.|.+.+.+|+||+|++||++-.++-+.+- +.+..+..++.+|..|+.+.|.. |
T Consensus 676 VKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgI---FeE~LARFYIAEltcAiesVHkm---G 749 (1034)
T KOG0608|consen 676 VKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGI---FEEDLARFYIAELTCAIESVHKM---G 749 (1034)
T ss_pred hhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHhc---c
Confidence 45688888888899999999999999999999999999999998866543 88899999999999999999999 9
Q ss_pred eeecCCCCCceEEcCCCceEEeecccccccCCC---------CC---------------------------------Cce
Q 040501 85 IVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD---------SS---------------------------------NWT 122 (228)
Q Consensus 85 i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~---------~~---------------------------------~~~ 122 (228)
++||||||+||||+.+|.+||+|||+|+-+... .. ...
T Consensus 750 FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ah 829 (1034)
T KOG0608|consen 750 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAH 829 (1034)
T ss_pred ceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhh
Confidence 999999999999999999999999999854210 00 011
Q ss_pred ecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHH
Q 040501 123 EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIM 202 (228)
Q Consensus 123 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (228)
...||+.|+|||++....++..+|.||.|++||+|+.|++||-.................++-.. ..+.+.+..
T Consensus 830 slvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~------~~~ls~e~~ 903 (1034)
T KOG0608|consen 830 SLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPY------QGNLSKEAL 903 (1034)
T ss_pred hhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhcccccc------ccccCHHHH
Confidence 23688999999999999999999999999999999999999865544433333333333322221 123444555
Q ss_pred HHHHHhh
Q 040501 203 EVAFLCL 209 (228)
Q Consensus 203 ~li~~~l 209 (228)
++|.++.
T Consensus 904 ~li~kLc 910 (1034)
T KOG0608|consen 904 DLIQKLC 910 (1034)
T ss_pred HHHHHHh
Confidence 6665543
No 392
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=185.76 Aligned_cols=161 Identities=23% Similarity=0.402 Sum_probs=134.0
Q ss_pred hHHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 040501 2 KKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNN-DTSAEELGWSRRINVIKGIAHALSYLHH 79 (228)
Q Consensus 2 ~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 79 (228)
+++..+|+.+..+. .+|.+|.+++........||.||.++. +|+.+.+. -.....+++..+-+++..+.+|+.|||+
T Consensus 88 q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~ 166 (282)
T KOG0984|consen 88 QKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS 166 (282)
T ss_pred HHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH
Confidence 45678888887776 799999999999888999999999964 67666543 2223448889999999999999999999
Q ss_pred CCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCccccc----CCcccchhhhhHHHHHH
Q 040501 80 DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYT----MKVTAKCDVYSFGVLAL 155 (228)
Q Consensus 80 ~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~DiwslG~~l~ 155 (228)
+- .++|||+||+||+++.+|.+|++|||++....+. ...+...|-..|+|||.+.. ..|+.+|||||||+.+.
T Consensus 167 kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS-iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmi 243 (282)
T KOG0984|consen 167 KL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDS-IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMI 243 (282)
T ss_pred Hh--hhhhccCCcceEEEccCCcEEEcccccceeehhh-hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhh
Confidence 84 8999999999999999999999999999766532 22333567788999998754 36889999999999999
Q ss_pred HHHhCCCCccc
Q 040501 156 EVIKGKHPRDF 166 (228)
Q Consensus 156 ~~~~g~~p~~~ 166 (228)
||.+++.||+.
T Consensus 244 ElA~lr~PY~~ 254 (282)
T KOG0984|consen 244 EMAILRFPYES 254 (282)
T ss_pred hhhhccccccc
Confidence 99999999863
No 393
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-31 Score=202.84 Aligned_cols=222 Identities=26% Similarity=0.439 Sum_probs=167.1
Q ss_pred ChHHHHHHHHHHhcc--CCCccceeeeeeeecC----eEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHH
Q 040501 1 DKKEFLREITVLTEI--RHRNIVKFYGFCTHAR----HSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHAL 74 (228)
Q Consensus 1 ~~~~~~~E~~~l~~l--~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 74 (228)
++++|..|-.+++.. +|+||+.+++.-+... .+++|++|-+.|+|.+++..+. +++....+++..++.||
T Consensus 245 ~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~nt----isw~~~cria~SmarGL 320 (534)
T KOG3653|consen 245 EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKANT----ISWNSLCRIAESMARGL 320 (534)
T ss_pred HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhcc----ccHHHHHHHHHHHHHHH
Confidence 467888888888875 7999999998865544 8999999999999999998665 89999999999999999
Q ss_pred HHhhhCC------CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC--ceecccccceeCCcccccCCc-c---
Q 040501 75 SYLHHDC------IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAGTYGYVAPELAYTMKV-T--- 142 (228)
Q Consensus 75 ~~lh~~~------~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~-~--- 142 (228)
+|||+.- ++.|+|||||..|||+..|++..|.|||++......... .....||.+|||||++.+.-. .
T Consensus 321 a~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~ 400 (534)
T KOG3653|consen 321 AHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRD 400 (534)
T ss_pred HHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHH
Confidence 9999763 457999999999999999999999999999887644332 334789999999999876532 2
Q ss_pred --cchhhhhHHHHHHHHHhCCCCc--------ccc--ccccC-CCchh----hhhhhcCCCCCCCchhhhhhHHHHHHHH
Q 040501 143 --AKCDVYSFGVLALEVIKGKHPR--------DFL--SNVSS-SNPNI----LVNEMLDPRLPPLSVDIRGKVISIMEVA 205 (228)
Q Consensus 143 --~~~DiwslG~~l~~~~~g~~p~--------~~~--~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li 205 (228)
.+.||||+|.++|||++.-... +.. .+... ....+ +..+..++.++..-... ....-+.+.+
T Consensus 401 Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h-~~~~~l~et~ 479 (534)
T KOG3653|consen 401 AFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKH-AGMAVLCETI 479 (534)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcC-ccHHHHHHHH
Confidence 3689999999999998733221 100 00000 11111 22333334433322222 3455689999
Q ss_pred HHhhccCCCCCCCHHHHHHHhh
Q 040501 206 FLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 206 ~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
..||..||..|.|+.=+.+++.
T Consensus 480 EeCWDhDaeARLTA~Cv~eR~~ 501 (534)
T KOG3653|consen 480 EECWDHDAEARLTAGCVEERMA 501 (534)
T ss_pred HHHcCCchhhhhhhHHHHHHHH
Confidence 9999999999999987776653
No 394
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.97 E-value=1.3e-30 Score=185.71 Aligned_cols=164 Identities=23% Similarity=0.243 Sum_probs=123.2
Q ss_pred CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCce
Q 040501 43 GSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122 (228)
Q Consensus 43 ~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 122 (228)
|+|.+++.... ..+++.+++.++.|++.||.|||+. + ||+||+++.++.+++ ||.+.......
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc----
Confidence 57888887533 2389999999999999999999999 7 999999999999998 99887654322
Q ss_pred ecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHH--H
Q 040501 123 EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVI--S 200 (228)
Q Consensus 123 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 200 (228)
..+++.|+|||++.+..++.++||||+|+++|+|++|..||........ ......... ....+........... .
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 140 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA-ILEILLNGM-PADDPRDRSNLESVSAARS 140 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH-HHHHHHHHh-ccCCccccccHHHHHhhhh
Confidence 2578999999999999999999999999999999999999854322110 000111111 1111111111223333 6
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHHHh
Q 040501 201 IMEVAFLCLDNNPESRPNMQTICQLL 226 (228)
Q Consensus 201 ~~~li~~~l~~~p~~Rpt~~~il~~l 226 (228)
+.+++.+||..+|.+|||+.++++.+
T Consensus 141 ~~~~i~~cl~~~p~~Rp~~~~ll~~~ 166 (176)
T smart00750 141 FADFMRVCASRLPQRREAANHYLAHC 166 (176)
T ss_pred HHHHHHHHHhcccccccCHHHHHHHH
Confidence 89999999999999999999999865
No 395
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=6.7e-31 Score=184.85 Aligned_cols=213 Identities=21% Similarity=0.298 Sum_probs=158.3
Q ss_pred hHHHHHHHHHHhccC-CCccceeeeeeee--cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 040501 2 KKEFLREITVLTEIR-HRNIVKFYGFCTH--ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLH 78 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~-h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh 78 (228)
++.+.+|+.+|+.|+ ||||++++++..+ +..+.+++|++.+.+...+.. .++.-.+...+.+++.||.|||
T Consensus 76 kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCH 149 (338)
T KOG0668|consen 76 KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCH 149 (338)
T ss_pred HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHH
Confidence 467899999999996 9999999999864 457889999998877766542 2566677889999999999999
Q ss_pred hCCCCCeeecCCCCCceEEcCC-CceEEeecccccccCCCCCCceecccccceeCCcccccCC-cccchhhhhHHHHHHH
Q 040501 79 HDCIPPIVHRDISSKNVLLDLE-YEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALE 156 (228)
Q Consensus 79 ~~~~~~i~h~di~p~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~ 156 (228)
+. ||.|||+||.|++++.. ..++|+|+|++.+..+... ......+..|--||.+...+ |+.+.|+|||||++..
T Consensus 150 S~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~e-YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~ 225 (338)
T KOG0668|consen 150 SM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 225 (338)
T ss_pred hc---CcccccCCcceeeechhhceeeeeecchHhhcCCCce-eeeeeehhhcCCchheeechhccccHHHHHHHHHHHH
Confidence 99 99999999999999875 6789999999998765433 34456677888999887654 7889999999999999
Q ss_pred HHhCCCCccccccccC-----------------------C---CchhhhhhhcCCCCCC-Cchhh-hhhHHHHHHHHHHh
Q 040501 157 VIKGKHPRDFLSNVSS-----------------------S---NPNILVNEMLDPRLPP-LSVDI-RGKVISIMEVAFLC 208 (228)
Q Consensus 157 ~~~g~~p~~~~~~~~~-----------------------~---~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~li~~~ 208 (228)
|+..+.||.....-.. . .......+..+..+.. ..... .-.+++..+++.+.
T Consensus 226 miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldkl 305 (338)
T KOG0668|consen 226 MIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKL 305 (338)
T ss_pred HHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHH
Confidence 9999999742211000 0 0000011111111111 11111 12346788999999
Q ss_pred hccCCCCCCCHHHHHH
Q 040501 209 LDNNPESRPNMQTICQ 224 (228)
Q Consensus 209 l~~~p~~Rpt~~~il~ 224 (228)
|..|-++|+|++|...
T Consensus 306 LrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 306 LRYDHQERLTAKEAMA 321 (338)
T ss_pred HhhccccccchHHHhc
Confidence 9999999999998753
No 396
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.97 E-value=2.4e-31 Score=206.26 Aligned_cols=211 Identities=22% Similarity=0.275 Sum_probs=165.9
Q ss_pred HHHHHHHhccCC------CccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 040501 6 LREITVLTEIRH------RNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH 79 (228)
Q Consensus 6 ~~E~~~l~~l~h------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 79 (228)
+.|+++|++|+. -|+++++-+|...+++|+|||.+. .+|.+.+...+..-.+....+..+++|+.-||..|..
T Consensus 476 l~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~ 554 (752)
T KOG0670|consen 476 LKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK 554 (752)
T ss_pred hHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh
Confidence 579999999952 489999999999999999999884 5899999887766678899999999999999999999
Q ss_pred CCCCCeeecCCCCCceEEcCC-CceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHH
Q 040501 80 DCIPPIVHRDISSKNVLLDLE-YEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158 (228)
Q Consensus 80 ~~~~~i~h~di~p~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~ 158 (228)
. |++|.||||+|||++.. ..+||||||.+...+.+.. +....+-.|.|||++.|..|+...|+||+||.|||+.
T Consensus 555 c---~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~enei--tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElY 629 (752)
T KOG0670|consen 555 C---GVLHADIKPDNILVNESKNILKLCDFGSASFASENEI--TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELY 629 (752)
T ss_pred c---CeeecccCccceEeccCcceeeeccCccccccccccc--cHHHHHHhccCcceeecCcccCCccceeeceeeEEee
Confidence 8 99999999999999877 5679999999987664432 2234456799999999999999999999999999999
Q ss_pred hCCCCccccccc---------cC------------------------------------------CCc-hhhhhhhcCCC
Q 040501 159 KGKHPRDFLSNV---------SS------------------------------------------SNP-NILVNEMLDPR 186 (228)
Q Consensus 159 ~g~~p~~~~~~~---------~~------------------------------------------~~~-~~~~~~~~~~~ 186 (228)
||+..|+....- .+ ..+ ......+..
T Consensus 630 tGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~-- 707 (752)
T KOG0670|consen 630 TGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIA-- 707 (752)
T ss_pred ccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhc--
Confidence 999987532110 00 000 000000000
Q ss_pred CCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 187 LPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 187 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.+..+.+.......+.+|+.+||..||.+|.|+.++|.
T Consensus 708 ~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 708 VQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK 745 (752)
T ss_pred cCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 01123344556677999999999999999999999875
No 397
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-31 Score=207.49 Aligned_cols=151 Identities=26% Similarity=0.414 Sum_probs=136.5
Q ss_pred HHHHHHHhccC---CCccceeeeeeeecCeEEEEEEee-cCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 6 LREITVLTEIR---HRNIVKFYGFCTHARHSFLVYEYL-ENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 6 ~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
-.||++|.+++ |+||+|++++|++++.+|+++|.- +|.+|+++|..+.+ +++..+..++.|++.|+++||++
T Consensus 614 p~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~---m~E~eAk~IFkQV~agi~hlh~~- 689 (772)
T KOG1152|consen 614 PSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPR---MDEPEAKLIFKQVVAGIKHLHDQ- 689 (772)
T ss_pred chhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccCc---cchHHHHHHHHHHHhcccccccc-
Confidence 46999999997 999999999999999999999964 57789999987665 88999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcc-cchhhhhHHHHHHHHHhC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVT-AKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~DiwslG~~l~~~~~g 160 (228)
||+|||||-+|+.++.+|-+||+|||.+...... +...+.||..|.|||++.|.+|- ..-|||+||+++|.++..
T Consensus 690 --~ivhrdikdenvivd~~g~~klidfgsaa~~ksg--pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyk 765 (772)
T KOG1152|consen 690 --GIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG--PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYK 765 (772)
T ss_pred --CceecccccccEEEecCCeEEEeeccchhhhcCC--CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEec
Confidence 9999999999999999999999999998876533 34567899999999999999985 468999999999999998
Q ss_pred CCCc
Q 040501 161 KHPR 164 (228)
Q Consensus 161 ~~p~ 164 (228)
..||
T Consensus 766 enpy 769 (772)
T KOG1152|consen 766 ENPY 769 (772)
T ss_pred cCCC
Confidence 8886
No 398
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=3e-30 Score=212.26 Aligned_cols=194 Identities=19% Similarity=0.198 Sum_probs=128.5
Q ss_pred eecCeEEEEEEeecCCChhhhhhcCCCC-----------------CCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeecCC
Q 040501 28 THARHSFLVYEYLENGSLSVILNNDTSA-----------------EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDI 90 (228)
Q Consensus 28 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~di 90 (228)
......++|+||+.+++|.+++...... .......+..++.|++.||.|||+. ||+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcC
Confidence 3456789999999999999988653211 0112344567999999999999999 9999999
Q ss_pred CCCceEEcC-CCceEEeecccccccCCCCC-CceecccccceeCCcccccC----------------------Ccccchh
Q 040501 91 SSKNVLLDL-EYEAHVSDFGIAKFIQPDSS-NWTEFAGTYGYVAPELAYTM----------------------KVTAKCD 146 (228)
Q Consensus 91 ~p~nil~~~-~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~----------------------~~~~~~D 146 (228)
||+|||++. ++.+||+|||++........ ......+++.|+|||.+... .+..++|
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 999999986 57899999999975432221 12345678899999965322 1234569
Q ss_pred hhhHHHHHHHHHhCCCCcccccc-----ccC-CCchhhhhhhcCCCCCCC-c---hhhhhhHHHHHHHHHHhhccCCCCC
Q 040501 147 VYSFGVLALEVIKGKHPRDFLSN-----VSS-SNPNILVNEMLDPRLPPL-S---VDIRGKVISIMEVAFLCLDNNPESR 216 (228)
Q Consensus 147 iwslG~~l~~~~~g~~p~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~li~~~l~~~p~~R 216 (228)
|||+||++|+|+++..++..... ... .................. . ...........+||.+||++||++|
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR 441 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQR 441 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccC
Confidence 99999999999987766432100 000 000001111111110000 0 0000112235589999999999999
Q ss_pred CCHHHHHH
Q 040501 217 PNMQTICQ 224 (228)
Q Consensus 217 pt~~~il~ 224 (228)
||++++++
T Consensus 442 ~ta~e~L~ 449 (566)
T PLN03225 442 ISAKAALA 449 (566)
T ss_pred CCHHHHhC
Confidence 99999985
No 399
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=5.7e-29 Score=200.53 Aligned_cols=215 Identities=18% Similarity=0.219 Sum_probs=146.5
Q ss_pred HHHHHHHhccCCCcc-----ceeeeeeee--------cCeEEEEEEeecCCChhhhhhcCCC------------------
Q 040501 6 LREITVLTEIRHRNI-----VKFYGFCTH--------ARHSFLVYEYLENGSLSVILNNDTS------------------ 54 (228)
Q Consensus 6 ~~E~~~l~~l~h~~i-----~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~~~~~~~------------------ 54 (228)
..|+.++.+++|.++ ++++++|.. ....|+|+||+.+++|.+++.....
T Consensus 220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~ 299 (507)
T PLN03224 220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPD 299 (507)
T ss_pred HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhh
Confidence 346677777766544 667777643 3468999999999999998864211
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccce
Q 040501 55 ---AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGY 130 (228)
Q Consensus 55 ---~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y 130 (228)
....++..+..++.|++.+|.|||+. +++||||||+||+++.++.++|+|||++......... .....+++.|
T Consensus 300 ~~~~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y 376 (507)
T PLN03224 300 NMPQDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRY 376 (507)
T ss_pred hcccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcce
Confidence 11245677888999999999999999 9999999999999999999999999998654322211 1122347899
Q ss_pred eCCcccccCCc----------------------ccchhhhhHHHHHHHHHhCCC-CccccccccCC----Cchhhhhhhc
Q 040501 131 VAPELAYTMKV----------------------TAKCDVYSFGVLALEVIKGKH-PRDFLSNVSSS----NPNILVNEML 183 (228)
Q Consensus 131 ~aPE~~~~~~~----------------------~~~~DiwslG~~l~~~~~g~~-p~~~~~~~~~~----~~~~~~~~~~ 183 (228)
+|||.+..... ..+.|+||+||++|+|++|.. |+......... .......+..
T Consensus 377 ~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~ 456 (507)
T PLN03224 377 SPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY 456 (507)
T ss_pred eChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh
Confidence 99998754321 124699999999999999876 65432211110 0000001111
Q ss_pred CCCCCCCchhhhhhHHHHHHHHHHhhccCC---CCCCCHHHHHH
Q 040501 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNP---ESRPNMQTICQ 224 (228)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rpt~~~il~ 224 (228)
.......+ .....+....+++.+||..+| .+|+|++++++
T Consensus 457 ~~~~~~~~-~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 457 KGQKYDFS-LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cccCCCcc-cccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 11111111 233456678999999999766 68999999985
No 400
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7.4e-31 Score=189.34 Aligned_cols=216 Identities=24% Similarity=0.319 Sum_probs=157.7
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeec-----CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHA-----RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 76 (228)
.+++.+|+++|..++|.|++..+++.... ..+|++.|.+. .+|...|-. ...++...+.-+++|++.||+|
T Consensus 96 ~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQ-SDLHKIIVS---PQ~Ls~DHvKVFlYQILRGLKY 171 (449)
T KOG0664|consen 96 CKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQ-SDLHKIIVS---PQALTPDHVKVFVYQILRGLKY 171 (449)
T ss_pred HHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHH-hhhhheecc---CCCCCcchhhhhHHHHHhhhHH
Confidence 46789999999999999999999887543 25678888774 467666643 3347778888899999999999
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC-ceecccccceeCCcccccCC-cccchhhhhHHHHH
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN-WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLA 154 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l 154 (228)
||+. ||.||||||.|.+++.+..+||+|||+++....+... .+...-|..|+|||.+.|.. |+.+.||||.||++
T Consensus 172 LHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIF 248 (449)
T KOG0664|consen 172 LHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIF 248 (449)
T ss_pred Hhhc---chhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHH
Confidence 9999 9999999999999999999999999999876544332 34455688999999998875 89999999999999
Q ss_pred HHHHhCCCCccccccccCCC-----------------chhhhhhhcCCCC--CCCch-----hhhhhHHHHHHHHHHhhc
Q 040501 155 LEVIKGKHPRDFLSNVSSSN-----------------PNILVNEMLDPRL--PPLSV-----DIRGKVISIMEVAFLCLD 210 (228)
Q Consensus 155 ~~~~~g~~p~~~~~~~~~~~-----------------~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~li~~~l~ 210 (228)
.|++..+..|+..+.....+ .......+++... +.... ......-+-..+..+++.
T Consensus 249 aELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~ 328 (449)
T KOG0664|consen 249 AELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLH 328 (449)
T ss_pred HHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhC
Confidence 99998888775433221100 0011112222211 11100 000112235678888999
Q ss_pred cCCCCCCCHHHHHH
Q 040501 211 NNPESRPNMQTICQ 224 (228)
Q Consensus 211 ~~p~~Rpt~~~il~ 224 (228)
++|..|.+..+.+.
T Consensus 329 ~d~dkris~~~A~~ 342 (449)
T KOG0664|consen 329 FDPDKRISVEEALQ 342 (449)
T ss_pred CCCcccccHhhhcc
Confidence 99999999888764
No 401
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2e-28 Score=188.51 Aligned_cols=91 Identities=29% Similarity=0.535 Sum_probs=78.5
Q ss_pred HHHHHHHHHHhccC-C-------Cccceeeeeeee----cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIR-H-------RNIVKFYGFCTH----ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGI 70 (228)
Q Consensus 3 ~~~~~E~~~l~~l~-h-------~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l 70 (228)
+....||++|++++ + .+||++++.|.. +.++++|+|++ |.+|..+|...... .++...+.++++||
T Consensus 119 EaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~Yr-Glpl~~VK~I~~qv 196 (590)
T KOG1290|consen 119 EAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYR-GLPLSCVKEICRQV 196 (590)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCC-CCcHHHHHHHHHHH
Confidence 46688999999984 2 489999999964 56999999999 55777777765543 38999999999999
Q ss_pred HHHHHHhhhCCCCCeeecCCCCCceEE
Q 040501 71 AHALSYLHHDCIPPIVHRDISSKNVLL 97 (228)
Q Consensus 71 ~~~l~~lh~~~~~~i~h~di~p~nil~ 97 (228)
+.||.|||..| ||+|.||||+|||+
T Consensus 197 L~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 197 LTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred HHHHHHHHHhc--CccccCCCcceeee
Confidence 99999999998 99999999999998
No 402
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=7e-30 Score=202.92 Aligned_cols=210 Identities=28% Similarity=0.394 Sum_probs=170.3
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+-++.|+-+++..+|+||+.+++.+......||.||||.||+|.+...-.+. +++.++..+++..+.+++|||+.
T Consensus 57 ~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~~Tgp---lselqiayvcRetl~gl~ylhs~-- 131 (829)
T KOG0576|consen 57 SGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGP---LSELQIAYVCRETLQGLKYLHSQ-- 131 (829)
T ss_pred cccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeeccc---chhHHHHHHHhhhhccchhhhcC--
Confidence 3456788899999999999999999999999999999999999998765443 88899999999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccc---cCCcccchhhhhHHHHHHHHHh
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAY---TMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~~~~~ 159 (228)
|=+|||||-.||++++.|.+|+.|||.+..++..-.....+.|++.|+|||+.. ...|...+|||++|+...++-.
T Consensus 132 -gk~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~e 210 (829)
T KOG0576|consen 132 -GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGE 210 (829)
T ss_pred -CcccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhh
Confidence 999999999999999999999999999988877767778899999999999764 4457889999999999999988
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCC-CCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRL-PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.++|-... .+.....-+-.... ++.-.+...-...+.++++.+|-+||++|||+..++.
T Consensus 211 Lqpplfdl------hpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 211 LQPPLFDL------HPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred cCCccccc------chHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 88884322 22222222211111 2222222344556889999999999999999987653
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.2e-29 Score=179.75 Aligned_cols=202 Identities=22% Similarity=0.362 Sum_probs=156.0
Q ss_pred HHHHHHHHHHhcc-CCCccceeeee-eeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGF-CTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
++|.+|...--.| .|.||+..++. |+..+.+++++|+++-|+|.+-+...+ +.+.....++.|+++||.|||+.
T Consensus 65 ~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~G----igE~~~K~v~~ql~SAi~fMHsk 140 (378)
T KOG1345|consen 65 ADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAAG----IGEANTKKVFAQLLSAIEFMHSK 140 (378)
T ss_pred HHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCccc----ccHHHHHHHHHHHHHHHHHhhcc
Confidence 5688888877777 58999998876 456667789999999999988876533 77788889999999999999999
Q ss_pred CCCCeeecCCCCCceEEcC--CCceEEeecccccccCCCCCCceecccccceeCCcccccC-----CcccchhhhhHHHH
Q 040501 81 CIPPIVHRDISSKNVLLDL--EYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTM-----KVTAKCDVYSFGVL 153 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~--~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~DiwslG~~ 153 (228)
+++|||||.+||++-. .-++|++|||.+...+..... ......|.+||..... .....+|+|+||++
T Consensus 141 ---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~---~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi 214 (378)
T KOG1345|consen 141 ---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY---LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGII 214 (378)
T ss_pred ---chhhcccccceEEEecCCccEEEeeecccccccCceehh---hhhhcccCCcHHHhhccccceEecccccchheeee
Confidence 9999999999999943 358999999998875533222 2233457888865322 24568999999999
Q ss_pred HHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCC
Q 040501 154 ALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216 (228)
Q Consensus 154 l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 216 (228)
+|.+++|..||+.....+ ..............+..+......++.+..+.++-|..+|++|
T Consensus 215 ~f~cltG~~PWQka~~~d--~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 215 FFYCLTGKFPWQKASIMD--KPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred eeeeecCCCcchhhhccC--chHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 999999999998443322 2233344445555566666667777888999999999999999
No 404
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=6.5e-27 Score=172.55 Aligned_cols=159 Identities=36% Similarity=0.572 Sum_probs=138.3
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+.+|++.++.++|+|++++++++......++++|++.+++|.+++...... ++...++.++.+++.++.+||+.
T Consensus 41 ~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~~- 117 (225)
T smart00221 41 REEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGK--LSEEEARFYLRQILEALEYLHSL- 117 (225)
T ss_pred HHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHhC-
Confidence 457889999999999999999999999889999999999999999998764322 68889999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCC-CCceecccccceeCCccc-ccCCcccchhhhhHHHHHHHHHh
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS-SNWTEFAGTYGYVAPELA-YTMKVTAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~aPE~~-~~~~~~~~~DiwslG~~l~~~~~ 159 (228)
+++|+|++|.||+++.++.++|+|||.+....... .......+...|++||.+ ....++.++|+|+||++++++++
T Consensus 118 --~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~ 195 (225)
T smart00221 118 --GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLW 195 (225)
T ss_pred --CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999888765432 112234567789999988 56667789999999999999999
Q ss_pred CCCCcc
Q 040501 160 GKHPRD 165 (228)
Q Consensus 160 g~~p~~ 165 (228)
|+.||.
T Consensus 196 g~~pf~ 201 (225)
T smart00221 196 GPEPFS 201 (225)
T ss_pred CCCCcc
Confidence 999985
No 405
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=1.5e-26 Score=175.32 Aligned_cols=154 Identities=27% Similarity=0.421 Sum_probs=130.3
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.++..|+++|..+ -+.||+++.+.+..++...+|+||+++....++... ++...+..+++.++.||+++|+.
T Consensus 79 ~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~- 151 (418)
T KOG1167|consen 79 SRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKN- 151 (418)
T ss_pred hHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhcc-
Confidence 4578999999999 599999999999999999999999999998888753 67788999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCC-CceEEeecccccccCCCC--------------C----------------C----------
Q 040501 82 IPPIVHRDISSKNVLLDLE-YEAHVSDFGIAKFIQPDS--------------S----------------N---------- 120 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~-~~~~l~df~~~~~~~~~~--------------~----------------~---------- 120 (228)
||+||||||+|++++.. +.-.|+|||++....... . .
T Consensus 152 --GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~ 229 (418)
T KOG1167|consen 152 --GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDG 229 (418)
T ss_pred --CccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCC
Confidence 99999999999999865 677899999998211000 0 0
Q ss_pred ----ceecccccceeCCcccccCC-cccchhhhhHHHHHHHHHhCCCCcc
Q 040501 121 ----WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIKGKHPRD 165 (228)
Q Consensus 121 ----~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~~~~g~~p~~ 165 (228)
.....||+.|+|||++..-+ .+++.||||.|+++..++++..||.
T Consensus 230 r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 230 RPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFF 279 (418)
T ss_pred ccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccc
Confidence 01135789999999987654 5789999999999999999999974
No 406
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=3.2e-27 Score=194.23 Aligned_cols=212 Identities=18% Similarity=0.230 Sum_probs=164.3
Q ss_pred HHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCC
Q 040501 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPP 84 (228)
Q Consensus 5 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~ 84 (228)
+..|+-+-..++|+|++..+..+.+....+-.||||+. +|..++.... .+....+-.++.|++.|++|+|+. |
T Consensus 368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h~~---G 440 (601)
T KOG0590|consen 368 ITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLHSM---G 440 (601)
T ss_pred hhhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhccc---ccchhhhhHHHHHHHHHHHHHHhc---C
Confidence 44566667778999999888888776666666999998 9999887652 277788899999999999999999 9
Q ss_pred eeecCCCCCceEEcCCCceEEeecccccccCCCCCC----ceecccccceeCCcccccCCccc-chhhhhHHHHHHHHHh
Q 040501 85 IVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN----WTEFAGTYGYVAPELAYTMKVTA-KCDVYSFGVLALEVIK 159 (228)
Q Consensus 85 i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~-~~DiwslG~~l~~~~~ 159 (228)
+.|||+|++|+++..+|.+||+|||.+......... .....|+..|+|||.+.+..|.. ..||||.|+++..|.+
T Consensus 441 iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~ 520 (601)
T KOG0590|consen 441 LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMIL 520 (601)
T ss_pred ceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEec
Confidence 999999999999999999999999988765433322 44578899999999999999876 5899999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|+.||.................. ..........+...+.....+|.+||+.+|.+|.|+++|++
T Consensus 521 ~~~~Wk~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 521 GRFPWKVAKKSDNSFKTNNYSDQ-RNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred CCCccccccccccchhhhccccc-cccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 99999765443322100000000 01111112224455667789999999999999999999986
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=2e-23 Score=161.93 Aligned_cols=214 Identities=20% Similarity=0.229 Sum_probs=161.5
Q ss_pred HHHHHHHHHhccC----CCccceeeeee-eecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 040501 4 EFLREITVLTEIR----HRNIVKFYGFC-THARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLH 78 (228)
Q Consensus 4 ~~~~E~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh 78 (228)
.+..|..++..+. ..++..+++.+ .....-|+||+.+ |.+|.++..... ...++..+++.++.|++.+|.++|
T Consensus 62 ~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH 139 (322)
T KOG1164|consen 62 VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLH 139 (322)
T ss_pred cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHH
Confidence 4678999999986 26999999999 5777889999977 779999887665 456999999999999999999999
Q ss_pred hCCCCCeeecCCCCCceEEcCC-----CceEEeeccccc--ccCCCCC-----C---ceecccccceeCCcccccCCccc
Q 040501 79 HDCIPPIVHRDISSKNVLLDLE-----YEAHVSDFGIAK--FIQPDSS-----N---WTEFAGTYGYVAPELAYTMKVTA 143 (228)
Q Consensus 79 ~~~~~~i~h~di~p~nil~~~~-----~~~~l~df~~~~--~~~~~~~-----~---~~~~~~~~~y~aPE~~~~~~~~~ 143 (228)
+. |++||||||+|++++.. ..+.+.|||+++ ....... . .....||..|.++.+..+...+.
T Consensus 140 ~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r 216 (322)
T KOG1164|consen 140 SK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGR 216 (322)
T ss_pred hc---CcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCC
Confidence 99 99999999999999865 468999999998 3211111 1 12345899999999999999999
Q ss_pred chhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 040501 144 KCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223 (228)
Q Consensus 144 ~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il 223 (228)
+.|+||++.++.+++.|..||........ ............... .....+.++.++...+-..+..++|.+..+.
T Consensus 217 ~DDles~~Y~l~el~~g~LPW~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~ 291 (322)
T KOG1164|consen 217 RDDLESLFYMLLELLKGSLPWEALEMTDL---KSKFEKDPRKLLTDR--FGDLKPEEFAKILEYIDSLDYEDKPDYEKLA 291 (322)
T ss_pred chhhhhHHHHHHHHhcCCCCCccccccch---HHHHHHHhhhhcccc--ccCCChHHHHHHHHHhhccCCcCCCCHHHHH
Confidence 99999999999999999999865432211 111111111111100 1122344566666666678999999999998
Q ss_pred HHhh
Q 040501 224 QLLC 227 (228)
Q Consensus 224 ~~l~ 227 (228)
+.|+
T Consensus 292 ~~l~ 295 (322)
T KOG1164|consen 292 ELLK 295 (322)
T ss_pred HHHH
Confidence 8764
No 408
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=4e-23 Score=152.97 Aligned_cols=216 Identities=18% Similarity=0.243 Sum_probs=177.0
Q ss_pred HHHHHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.++..|...++.| ..++|..++-+..++.+-.+|+|.+ |-+|.|++.-++.. ++..++..++.|++.-+.++|++
T Consensus 68 PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~--FSvKTV~miA~Qmi~rie~vH~k- 143 (449)
T KOG1165|consen 68 PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRR--FSVKTVAMIAKQMITRIEYVHEK- 143 (449)
T ss_pred chHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCc--ccHHhHHHHHHHHHHHHHHHHhc-
Confidence 3567899999999 5799999999999988888999988 67899988776654 99999999999999999999999
Q ss_pred CCCeeecCCCCCceEEcCC-----CceEEeecccccccCCCCCC-------ceecccccceeCCcccccCCcccchhhhh
Q 040501 82 IPPIVHRDISSKNVLLDLE-----YEAHVSDFGIAKFIQPDSSN-------WTEFAGTYGYVAPELAYTMKVTAKCDVYS 149 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~-----~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Diws 149 (228)
.++.|||||+|+||... +.+.++|||+++...++... .....||.+||+-....+..-|.+.|+-|
T Consensus 144 --~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEa 221 (449)
T KOG1165|consen 144 --DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEA 221 (449)
T ss_pred --ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHH
Confidence 99999999999999754 45899999999977655443 34567899999999999999999999999
Q ss_pred HHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHh
Q 040501 150 FGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226 (228)
Q Consensus 150 lG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 226 (228)
||-++.+++-|..||+...........+.+.+. .+..+......+++.++..-+.-.-+.+-.+-|+++-+...+
T Consensus 222 LGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~--Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf 296 (449)
T KOG1165|consen 222 LGHVFMYFLRGSLPWQGLKADTNKEKYEKIGET--KRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLF 296 (449)
T ss_pred hhhhhhhhccCCCccccccCcchHHHHHHhccc--cccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHH
Confidence 999999999999999876554333222222222 333445555678888998988888888999999998777665
No 409
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.90 E-value=2.1e-23 Score=165.12 Aligned_cols=208 Identities=26% Similarity=0.468 Sum_probs=160.4
Q ss_pred HhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCe-eecCC
Q 040501 12 LTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPI-VHRDI 90 (228)
Q Consensus 12 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i-~h~di 90 (228)
|+.+.|.|+.++++.+..+...++|.++|..|+|.|.+.... ..+++.....+.++++.|+.|+|+. .+ +|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~--~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED--IKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc--cCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 467899999999999999999999999999999999998633 3378888889999999999999998 54 99999
Q ss_pred CCCceEEcCCCceEEeecccccccCC--CCCCceecccccceeCCcccccCC-------cccchhhhhHHHHHHHHHhCC
Q 040501 91 SSKNVLLDLEYEAHVSDFGIAKFIQP--DSSNWTEFAGTYGYVAPELAYTMK-------VTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 91 ~p~nil~~~~~~~~l~df~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~-------~~~~~DiwslG~~l~~~~~g~ 161 (228)
+..|++++....+|++|||+...... ............-|.|||.+.... .+.+.|+||+|++++++++..
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 99999999999999999999887642 111122223455699999887642 355799999999999999999
Q ss_pred CCccccccccCCCchhhhhhhcC-CC---CCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLD-PR---LPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
.||+........ .+....+.+ +. .|..... ....+++..++..||..+|.+||+++.+...++
T Consensus 156 ~~~~~~~~~~~~--~eii~~~~~~~~~~~rP~i~~~-~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~ 222 (484)
T KOG1023|consen 156 GPFDLRNLVEDP--DEIILRVKKGGSNPFRPSIELL-NELPPELLLLVARCWEEIPEKRPSIEQIRSKLL 222 (484)
T ss_pred CccccccccCCh--HHHHHHHHhcCCCCcCcchhhh-hhcchHHHHHHHHhcccChhhCccHHHHHhhhh
Confidence 998764433322 333333222 11 1222211 155557999999999999999999999987764
No 410
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=4.5e-24 Score=154.40 Aligned_cols=209 Identities=25% Similarity=0.418 Sum_probs=161.2
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
+|..|.-.|+.+.||||+++++.|.....+.++..|++-++|+..+....+ -.++..++.+++.+++.|++|||+..
T Consensus 233 dfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~-vvvd~sqav~faldiargmaflhsle-- 309 (448)
T KOG0195|consen 233 DFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSLE-- 309 (448)
T ss_pred hhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhcc--
Confidence 578899999999999999999999999999999999999999999986543 33678899999999999999999984
Q ss_pred Ceeec-CCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCc---ccchhhhhHHHHHHHHHh
Q 040501 84 PIVHR-DISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKV---TAKCDVYSFGVLALEVIK 159 (228)
Q Consensus 84 ~i~h~-di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~---~~~~DiwslG~~l~~~~~ 159 (228)
.++-+ -++...++++++-+.+|. .+-+++.-.. ....-.|.|++||.+...+- -.++|+|||++++||+.+
T Consensus 310 p~ipr~~lns~hvmidedltaris-mad~kfsfqe----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~t 384 (448)
T KOG0195|consen 310 PMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQE----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNT 384 (448)
T ss_pred hhhhhhhcccceEEecchhhhhee-cccceeeeec----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhc
Confidence 45444 689999999998777663 2212211111 11233578999999877653 357999999999999999
Q ss_pred CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhhC
Q 040501 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228 (228)
Q Consensus 160 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 228 (228)
...||........... ..-+-++...|+ +.+..+..++.-|++.||.+||.++.++-.|+|
T Consensus 385 revpfadlspmecgmk--ialeglrv~ipp------gis~hm~klm~icmnedpgkrpkfdmivpilek 445 (448)
T KOG0195|consen 385 REVPFADLSPMECGMK--IALEGLRVHIPP------GISRHMNKLMNICMNEDPGKRPKFDMIVPILEK 445 (448)
T ss_pred cccccccCCchhhhhh--hhhccccccCCC------CccHHHHHHHHHHhcCCCCcCCCcceehhhHHH
Confidence 9999876655443222 222333344443 556678899999999999999999999988875
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.89 E-value=7.8e-22 Score=153.35 Aligned_cols=218 Identities=30% Similarity=0.455 Sum_probs=164.3
Q ss_pred hHHHHHHHHHHhccCCC-ccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 2 KKEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
...+.+|+.++..+.|+ +++++.+.+......+++++++.++++.+++........+.......++.|++.++.++|+.
T Consensus 41 ~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~ 120 (384)
T COG0515 41 VERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK 120 (384)
T ss_pred HHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 35688999999999887 79999999987777899999999999997766543212478899999999999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCC-ceEEeecccccccCCCCC------CceecccccceeCCccccc---CCcccchhhhhH
Q 040501 81 CIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFIQPDSS------NWTEFAGTYGYVAPELAYT---MKVTAKCDVYSF 150 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~-~~~l~df~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~---~~~~~~~Diwsl 150 (228)
+++|||+||+||+++..+ .++++|||.+........ ......++..|++||.+.+ ...+...|+|++
T Consensus 121 ---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~ 197 (384)
T COG0515 121 ---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSL 197 (384)
T ss_pred ---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHH
Confidence 999999999999999988 799999999875543332 2355678999999999887 467889999999
Q ss_pred HHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhh-----hhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 151 GVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDI-----RGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 151 G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
|+++++++.|..||...... .........+.....+...... ......+.+++..++..+|..|.+..+...
T Consensus 198 g~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 198 GITLYELLTGLPPFEGEKNS--SATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred HHHHHHHHhCCCCCCCCCcc--ccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 99999999999996543321 0011111111111111000000 111246789999999999999998876543
No 412
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=4e-23 Score=146.82 Aligned_cols=214 Identities=20% Similarity=0.281 Sum_probs=172.2
Q ss_pred HHHHHHHHHhccC-CCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 4 EFLREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 4 ~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
.+..|..+++.|+ ..+|+.+..++.+...-.+||+.+ |-+|.+++.-+... +++.+++.++-|++.-++|+|.+
T Consensus 56 qL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~--ftmkTvLMLaDQml~RiEyvH~r-- 130 (341)
T KOG1163|consen 56 QLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRR--FTMKTVLMLADQMLSRIEYVHLR-- 130 (341)
T ss_pred chhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhh--hhHHhHHHHHHHHHHHHHHHHhh--
Confidence 4567999999996 488888889999998999999988 67999998765544 89999999999999999999999
Q ss_pred CCeeecCCCCCceEEcCC---CceEEeecccccccCCCCCC-------ceecccccceeCCcccccCCcccchhhhhHHH
Q 040501 83 PPIVHRDISSKNVLLDLE---YEAHVSDFGIAKFIQPDSSN-------WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGV 152 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~---~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~ 152 (228)
+++||||||+|++..-+ +.+.++|||+++..-+.... .....||.+|.+-....+..-+.+.|+-|+|.
T Consensus 131 -~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgY 209 (341)
T KOG1163|consen 131 -NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGY 209 (341)
T ss_pred -ccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcc
Confidence 99999999999999754 56899999999876543322 33467899999988887777889999999999
Q ss_pred HHHHHHhCCCCccccccccCCCchhhhhhhcCCCC-CCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHh
Q 040501 153 LALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRL-PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226 (228)
Q Consensus 153 ~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 226 (228)
++.++--|..||+.....+..... +.+...+. .+......+++.++.-.+.-|-...-.+-|+..-+.+.+
T Consensus 210 vLmYfnrG~LPWQglka~tk~QKy---EkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlF 281 (341)
T KOG1163|consen 210 VLMYFNRGSLPWQGLKAATKKQKY---EKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLF 281 (341)
T ss_pred eeeeeecCCCcccccchhhHHHHH---HHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHH
Confidence 999999999999876554433222 22322232 233444678888999999999999999999988777655
No 413
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=1.1e-21 Score=148.89 Aligned_cols=194 Identities=22% Similarity=0.316 Sum_probs=137.5
Q ss_pred CCCccceeeeeeee---------------------------cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHH
Q 040501 16 RHRNIVKFYGFCTH---------------------------ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIK 68 (228)
Q Consensus 16 ~h~~i~~~~~~~~~---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 68 (228)
+|||||.++..|.+ ...+|+||..++. +|..++..+. .+.....-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC----CchHHHHHHHH
Confidence 69999999887742 3468999998865 8888886543 45566677899
Q ss_pred HHHHHHHHhhhCCCCCeeecCCCCCceEEc--CCC--ceEEeecccccccCCCC------CCceecccccceeCCccccc
Q 040501 69 GIAHALSYLHHDCIPPIVHRDISSKNVLLD--LEY--EAHVSDFGIAKFIQPDS------SNWTEFAGTYGYVAPELAYT 138 (228)
Q Consensus 69 ~l~~~l~~lh~~~~~~i~h~di~p~nil~~--~~~--~~~l~df~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~ 138 (228)
|+++|+.|||++ |+.|||+|.+||++. +|+ .+.+.|||.+---.... .......|+-.-+|||+...
T Consensus 349 QlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 999999999999 999999999999994 343 35788999775322211 01122456778899998764
Q ss_pred CC------cccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccC
Q 040501 139 MK------VTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNN 212 (228)
Q Consensus 139 ~~------~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 212 (228)
.. .-.++|.|+.|.+.||++....||-.-.+..-... ..-...+|..+ ..++..+.+++...|+.|
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r-----~Yqe~qLPalp---~~vpp~~rqlV~~lL~r~ 497 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR-----TYQESQLPALP---SRVPPVARQLVFDLLKRD 497 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechh-----hhhhhhCCCCc---ccCChHHHHHHHHHhcCC
Confidence 32 12489999999999999999999854222211111 12222333333 245566889999999999
Q ss_pred CCCCCCHHHHHHH
Q 040501 213 PESRPNMQTICQL 225 (228)
Q Consensus 213 p~~Rpt~~~il~~ 225 (228)
|++|++..-..+.
T Consensus 498 pskRvsp~iAANv 510 (598)
T KOG4158|consen 498 PSKRVSPNIAANV 510 (598)
T ss_pred ccccCCccHHHhH
Confidence 9999997544443
No 414
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.87 E-value=1.1e-22 Score=170.42 Aligned_cols=197 Identities=20% Similarity=0.263 Sum_probs=144.6
Q ss_pred HHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCee
Q 040501 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIV 86 (228)
Q Consensus 7 ~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~ 86 (228)
.|++ ....++||.+++.-.-..+...|+|-+|..+ +|.|++...+- +...+...++.|++.||+.+|.. ||+
T Consensus 71 ~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh-nLyDRlSTRPF---L~~iEKkWiaFQLL~al~qcH~~---gVc 142 (1431)
T KOG1240|consen 71 EEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVKH-NLYDRLSTRPF---LVLIEKKWIAFQLLKALSQCHKL---GVC 142 (1431)
T ss_pred HHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHhh-hhhhhhccchH---HHHHHHHHHHHHHHHHHHHHHHc---Ccc
Confidence 3444 4445899999998887778888899898865 88888876543 66777778999999999999999 999
Q ss_pred ecCCCCCceEEcCCCceEEeecccccccCCCCC---Cc----eecccccceeCCcccccC----------C-cccchhhh
Q 040501 87 HRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS---NW----TEFAGTYGYVAPELAYTM----------K-VTAKCDVY 148 (228)
Q Consensus 87 h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~---~~----~~~~~~~~y~aPE~~~~~----------~-~~~~~Diw 148 (228)
|||||.+|||++.=+=+.|+||..-+..--+.. .. .+...-.+|.|||-+... . .+.+-|||
T Consensus 143 HGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIF 222 (1431)
T KOG1240|consen 143 HGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIF 222 (1431)
T ss_pred ccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhh
Confidence 999999999999877788999986654321111 11 122334689999966431 1 45788999
Q ss_pred hHHHHHHHHHh-CCCCcccccc-----ccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHH
Q 040501 149 SFGVLALEVIK-GKHPRDFLSN-----VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222 (228)
Q Consensus 149 slG~~l~~~~~-g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i 222 (228)
|+||++.|+++ |.++|....- ....+.....+.+.+. .+..+|..|++.||..|.++++.
T Consensus 223 S~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~Le~Ied~--------------~~Rnlil~Mi~rdPs~RlSAedy 288 (1431)
T KOG1240|consen 223 SAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQLLEKIEDV--------------SLRNLILSMIQRDPSKRLSAEDY 288 (1431)
T ss_pred hhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHHHHhCcCc--------------cHHHHHHHHHccCchhccCHHHH
Confidence 99999999987 7888753211 1122233333333222 36799999999999999999999
Q ss_pred HHH
Q 040501 223 CQL 225 (228)
Q Consensus 223 l~~ 225 (228)
|+.
T Consensus 289 L~~ 291 (1431)
T KOG1240|consen 289 LQK 291 (1431)
T ss_pred HHh
Confidence 874
No 415
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.87 E-value=5.9e-23 Score=160.29 Aligned_cols=172 Identities=22% Similarity=0.361 Sum_probs=136.4
Q ss_pred eEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccc
Q 040501 32 HSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA 111 (228)
Q Consensus 32 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~ 111 (228)
.+||.|++|...+|.+|+.+.......++.....++.|++.++.| + +.+|+|+||.||++..+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 578999999999999999876666678889999999999999999 6 9999999999999999999999999998
Q ss_pred cccCCCCC------CceecccccceeCCcccccCCcccchhhhhHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcC
Q 040501 112 KFIQPDSS------NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLD 184 (228)
Q Consensus 112 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~ 184 (228)
+....... ..+...|+..|++||.+.+..|+.++||||||++++|++. -..++. .......+-+
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e---------r~~t~~d~r~ 474 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE---------RIATLTDIRD 474 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH---------HHHhhhhhhc
Confidence 87654441 2456789999999999999999999999999999999986 222321 2223334444
Q ss_pred CCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHH
Q 040501 185 PRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQT 221 (228)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 221 (228)
+.+++.. ..+++. -+.|+.+++.+.|.+||++.+
T Consensus 475 g~ip~~~--~~d~p~-e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 475 GIIPPEF--LQDYPE-EYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred CCCChHH--hhcCcH-HHHHHHHhcCCCcccCchHHH
Confidence 4544221 122332 358999999999999995544
No 416
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.86 E-value=3.5e-22 Score=149.18 Aligned_cols=162 Identities=21% Similarity=0.280 Sum_probs=105.9
Q ss_pred EEEEEeecCCChhhhhhc---C-CCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecc
Q 040501 34 FLVYEYLENGSLSVILNN---D-TSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFG 109 (228)
Q Consensus 34 ~lv~e~~~~~~L~~~~~~---~-~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~ 109 (228)
+++|+-+ .++|.+++.. . ...........+.+..|++..+++||+. |++|+||+|+|++++.+|.++|+||+
T Consensus 115 ~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi~~~nfll~~~G~v~Lg~F~ 190 (288)
T PF14531_consen 115 FLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDIKPENFLLDQDGGVFLGDFS 190 (288)
T ss_dssp EEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEE-TTS-EEE--GG
T ss_pred hhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecccceeeEEEcCCCCEEEcChH
Confidence 6677866 4577776542 1 1122244555567779999999999999 99999999999999999999999998
Q ss_pred cccccCCCCCCceecccccceeCCcccccC--------CcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhh
Q 040501 110 IAKFIQPDSSNWTEFAGTYGYVAPELAYTM--------KVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNE 181 (228)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--------~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~ 181 (228)
.....+.. ......+..|.|||..... .++.+.|.|+||+++|.++++..||+..........
T Consensus 191 ~~~r~g~~---~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------ 261 (288)
T PF14531_consen 191 SLVRAGTR---YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------ 261 (288)
T ss_dssp GEEETTEE---EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------
T ss_pred HHeecCce---eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------
Confidence 77654421 1113345678899865432 367789999999999999999999875543322211
Q ss_pred hcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCC
Q 040501 182 MLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216 (228)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 216 (228)
... .+.+.++.+..||.++|++||.+|
T Consensus 262 -------~f~-~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 262 -------DFS-RCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp -------GGT-TSS---HHHHHHHHHHT-SSGGGS
T ss_pred -------cch-hcCCcCHHHHHHHHHHccCCcccC
Confidence 111 122677789999999999999987
No 417
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.85 E-value=9.2e-22 Score=156.53 Aligned_cols=188 Identities=27% Similarity=0.331 Sum_probs=154.4
Q ss_pred HHHHHHHhccC-CCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCC
Q 040501 6 LREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPP 84 (228)
Q Consensus 6 ~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~ 84 (228)
..|-.++..++ ||.++++...|+.+...++++++..|+.+...+..... +.+.....+...++-++.++|+. +
T Consensus 44 ~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~---f~~~~~~~~~aelaLald~lh~l---~ 117 (612)
T KOG0603|consen 44 KQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVM---FDELDVAFYLAELALALDHLHKL---G 117 (612)
T ss_pred ccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccCCc---hHHHHHHHHHHHHHHHHhhcchh---H
Confidence 34677788885 99999999999999999999999999988877654433 67777778889999999999999 9
Q ss_pred eeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCCc
Q 040501 85 IVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPR 164 (228)
Q Consensus 85 i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p~ 164 (228)
++++|+|++||+++.+|.+++.|||+++..-..... +|+..|+|||++. ....++|.||+|+++++|++|..||
T Consensus 118 iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf 191 (612)
T KOG0603|consen 118 IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPF 191 (612)
T ss_pred HHHhcccccceeecccCccccCCchhhhHhHhhhhc----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCC
Confidence 999999999999999999999999999865433322 8899999999987 5677899999999999999999998
Q ss_pred cccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCH
Q 040501 165 DFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM 219 (228)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 219 (228)
.. +....+....+.. .........+++.+++..+|..|.-.
T Consensus 192 ~~----------~~~~~Il~~~~~~----p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 192 GG----------DTMKRILKAELEM----PRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred ch----------HHHHHHhhhccCC----chhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 64 3344444433322 23555677899999999999999554
No 418
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=1.4e-20 Score=146.27 Aligned_cols=122 Identities=23% Similarity=0.232 Sum_probs=94.3
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
++.|.+|++++++++|+|+++.+.. ....|+||||+.|++|... . . .. ...++.+++++|.+||+.
T Consensus 65 ~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~LVmE~~~G~~L~~~-~--~----~~---~~~~~~~i~~aL~~lH~~- 130 (365)
T PRK09188 65 RHLAAREIRALKTVRGIGVVPQLLA---TGKDGLVRGWTEGVPLHLA-R--P----HG---DPAWFRSAHRALRDLHRA- 130 (365)
T ss_pred HHHHHHHHHHHHhccCCCCCcEEEE---cCCcEEEEEccCCCCHHHh-C--c----cc---hHHHHHHHHHHHHHHHHC-
Confidence 3568999999999999999853322 2457999999999999632 1 1 11 135788999999999999
Q ss_pred CCCeeecCC-CCCceEEcCCCceEEeecccccccCCCCCC--------ceecccccceeCCcccccC
Q 040501 82 IPPIVHRDI-SSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--------WTEFAGTYGYVAPELAYTM 139 (228)
Q Consensus 82 ~~~i~h~di-~p~nil~~~~~~~~l~df~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~ 139 (228)
|++|||| ||+||+++.++.++|+|||++......... .....+++.|.+||.+...
T Consensus 131 --gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 131 --GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred --CCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9999999 999999999999999999999876543321 1234567778999987643
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=3.1e-20 Score=132.28 Aligned_cols=146 Identities=14% Similarity=0.104 Sum_probs=108.3
Q ss_pred HHHHHHHHHhccC-CCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 4 EFLREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 4 ~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
.+.+|+++|++|. |+++++++++ ...+++|+|+.|.+|...... ....++.|++.+|.++|+.
T Consensus 47 l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~-- 110 (218)
T PRK12274 47 LARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRPPR----------GDLAYFRAARRLLQQLHRC-- 110 (218)
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhhhhh----------hhHHHHHHHHHHHHHHHHC--
Confidence 5789999999995 5889999886 346899999999888654311 1134778999999999999
Q ss_pred CCeeecCC-CCCceEEcCCCceEEeecccccccCCCCCC----c---------eecccccceeCCcccccC-Ccc-cchh
Q 040501 83 PPIVHRDI-SSKNVLLDLEYEAHVSDFGIAKFIQPDSSN----W---------TEFAGTYGYVAPELAYTM-KVT-AKCD 146 (228)
Q Consensus 83 ~~i~h~di-~p~nil~~~~~~~~l~df~~~~~~~~~~~~----~---------~~~~~~~~y~aPE~~~~~-~~~-~~~D 146 (228)
|++|||| ||+||+++.+|.++|+|||++......... . .....++.+++|+...-. ..+ ...+
T Consensus 111 -GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~ 189 (218)
T PRK12274 111 -GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIREL 189 (218)
T ss_pred -cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHH
Confidence 9999999 799999999999999999999865433311 0 001124455555532221 223 4567
Q ss_pred hhhHHHHHHHHHhCCCCccc
Q 040501 147 VYSFGVLALEVIKGKHPRDF 166 (228)
Q Consensus 147 iwslG~~l~~~~~g~~p~~~ 166 (228)
.++.|+.+|.++|+..+.-.
T Consensus 190 w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 190 WFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHhcchHHHHHhccCCccc
Confidence 88999999999999998543
No 420
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=1.8e-20 Score=136.12 Aligned_cols=128 Identities=15% Similarity=0.202 Sum_probs=98.8
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeec--------CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHA--------RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 75 (228)
.+.+|++.+.++.|++|..+.+++... ...+++|||++|.+|.++.. ++. ....+++.++.
T Consensus 81 ~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~ 149 (232)
T PRK10359 81 YYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIE 149 (232)
T ss_pred HHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHH
Confidence 368999999999999999999886533 35889999999999987632 222 24569999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHH
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLAL 155 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~ 155 (228)
.+|+. |++|+|++|+||+++.+| ++++|||........... ........+..++|+|+||+++.
T Consensus 150 ~lH~~---gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~------------d~~vler~y~~~~di~~lg~~~~ 213 (232)
T PRK10359 150 SLHQH---GMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAK------------DRIDLERHYGIKNEIKDLGYYLL 213 (232)
T ss_pred HHHHc---CCccCCCChHHEEEeCCC-EEEEECCCcccccchhhH------------HHHHHHhHhcccccccceeEeeh
Confidence 99999 999999999999999988 999999987644211110 00233334667899999999876
Q ss_pred HHH
Q 040501 156 EVI 158 (228)
Q Consensus 156 ~~~ 158 (228)
.+.
T Consensus 214 ~~~ 216 (232)
T PRK10359 214 IYK 216 (232)
T ss_pred HHH
Confidence 553
No 421
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.77 E-value=2.4e-18 Score=123.37 Aligned_cols=101 Identities=17% Similarity=0.158 Sum_probs=79.5
Q ss_pred HHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHh-hhCCCCC
Q 040501 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPP 84 (228)
Q Consensus 6 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l-h~~~~~~ 84 (228)
..|++.+.++.++++.....+.. . ..++||||++|+++....... ..++...+..++.|++.+|.++ |+. |
T Consensus 67 ~~E~~~l~~l~~~~v~~p~~~~~-~-~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~---g 138 (190)
T cd05147 67 EKEMRNLKRLVTAGIPCPEPILL-K-SHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDC---R 138 (190)
T ss_pred HHHHHHHHHHHHCCCCCCcEEEe-c-CCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhC---C
Confidence 45999999998887744433222 2 238999999987765543222 2378899999999999999999 788 9
Q ss_pred eeecCCCCCceEEcCCCceEEeecccccccC
Q 040501 85 IVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115 (228)
Q Consensus 85 i~h~di~p~nil~~~~~~~~l~df~~~~~~~ 115 (228)
++||||||+||+++ ++.++|+|||++....
T Consensus 139 iiHrDlkP~NIli~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 139 LVHADLSEYNLLYH-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred cccCCCCHHHEEEE-CCcEEEEEccccccCC
Confidence 99999999999998 4789999999997543
No 422
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.75 E-value=1.1e-18 Score=146.21 Aligned_cols=139 Identities=23% Similarity=0.294 Sum_probs=109.9
Q ss_pred HHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC---------------ceecccccceeCCc
Q 040501 70 IAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN---------------WTEFAGTYGYVAPE 134 (228)
Q Consensus 70 l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~---------------~~~~~~~~~y~aPE 134 (228)
++.+++|+|+. ||+|||+||+|.+++.-|.+|++|||+++........ ....+|++.|.|||
T Consensus 152 mvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPe 228 (1205)
T KOG0606|consen 152 MVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPE 228 (1205)
T ss_pred hhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChh
Confidence 37889999999 9999999999999999999999999998865432111 23458999999999
Q ss_pred ccccCCcccchhhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCC
Q 040501 135 LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPE 214 (228)
Q Consensus 135 ~~~~~~~~~~~DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 214 (228)
++....|...+|.|++|+++|+++.|..||.. ..+.+.+...+.-....... -...+.+..+++.++|+.+|.
T Consensus 229 VilrqgygkpvdwwamGiIlyeFLVgcvpffG------dtpeelfg~visd~i~wpE~-dea~p~Ea~dli~~LL~qnp~ 301 (1205)
T KOG0606|consen 229 VILRQGYGKPVDWWAMGIILYEFLVGCVPFFG------DTPEELFGQVISDDIEWPEE-DEALPPEAQDLIEQLLRQNPL 301 (1205)
T ss_pred hhhhhccCCCccHHHHHHHHHHHheeeeeccC------CCHHHHHhhhhhhhcccccc-CcCCCHHHHHHHHHHHHhChH
Confidence 99999999999999999999999999999753 33444444444433322222 234556789999999999999
Q ss_pred CCCC
Q 040501 215 SRPN 218 (228)
Q Consensus 215 ~Rpt 218 (228)
.|.-
T Consensus 302 ~Rlg 305 (1205)
T KOG0606|consen 302 CRLG 305 (1205)
T ss_pred hhcc
Confidence 9943
No 423
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.74 E-value=2e-17 Score=118.88 Aligned_cols=101 Identities=16% Similarity=0.185 Sum_probs=80.8
Q ss_pred HHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhh-hhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-CCC
Q 040501 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVI-LNNDTSAEELGWSRRINVIKGIAHALSYLHH-DCI 82 (228)
Q Consensus 5 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~~ 82 (228)
+.+|++.+.++.|+++.....+... ..|+||||++|+++... +.. ..++...+..++.|++.++.++|+ .
T Consensus 66 ~~~E~~~l~~l~~~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~~~-- 137 (190)
T cd05145 66 AEKEFRNLKRLYEAGVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQEA-- 137 (190)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEec--CCEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHHhC--
Confidence 4679999999999887544443332 24899999988755433 322 226778889999999999999999 8
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccccC
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~ 115 (228)
|++|+||||+||+++ ++.++|+|||++....
T Consensus 138 -givHrDlkP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 138 -GLVHGDLSEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CEecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence 999999999999999 8899999999997654
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.74 E-value=2.3e-17 Score=119.38 Aligned_cols=101 Identities=17% Similarity=0.215 Sum_probs=80.2
Q ss_pred hHHHHHHHHHHhcc-----CCCccceeeeeeeecC---e-EEEEEEe--ecCCChhhhhhcCCCCCCCCHHHHHHHHHHH
Q 040501 2 KKEFLREITVLTEI-----RHRNIVKFYGFCTHAR---H-SFLVYEY--LENGSLSVILNNDTSAEELGWSRRINVIKGI 70 (228)
Q Consensus 2 ~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~---~-~~lv~e~--~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l 70 (228)
.+.+.+|+++++.+ .||||++++++++++. . +.+|+|| +.+++|.+++.+.. +++. ..++.++
T Consensus 40 ~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~~----~~e~--~~~~~~~ 113 (210)
T PRK10345 40 DKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCR----YEED--VAQLRQL 113 (210)
T ss_pred HHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHccc----ccHh--HHHHHHH
Confidence 45689999999999 5799999999998764 3 3378999 44789999997532 4444 3457777
Q ss_pred HHHH-HHhhhCCCCCeeecCCCCCceEEcCC----CceEEeecccc
Q 040501 71 AHAL-SYLHHDCIPPIVHRDISSKNVLLDLE----YEAHVSDFGIA 111 (228)
Q Consensus 71 ~~~l-~~lh~~~~~~i~h~di~p~nil~~~~----~~~~l~df~~~ 111 (228)
+.++ +|||+. +|+||||||+||+++.. +.++|+|++.+
T Consensus 114 L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 114 LKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred HHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 7777 999999 99999999999999743 37999995433
No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=9.7e-18 Score=142.09 Aligned_cols=197 Identities=20% Similarity=0.144 Sum_probs=142.1
Q ss_pred HHHhccC---CCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCee
Q 040501 10 TVLTEIR---HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIV 86 (228)
Q Consensus 10 ~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~ 86 (228)
+++.+|+ -+.|..+.......+..++|++|.+.|+|.+++.. .+.+++.-++.+..|++..+.+||.. +||
T Consensus 743 q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N~---~~~m~e~lv~~~~~qml~ive~lH~~---~II 816 (974)
T KOG1166|consen 743 QVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLINT---NKVMDEYLVMFFSCQMLRIVEHLHAM---GII 816 (974)
T ss_pred HHHHhhchhhhcchHHHHHHHccCCcceeeeeccccccHHHhhcc---CCCCCchhhhHHHHHHHHHHHHHHhc---cee
Confidence 4555665 24455555555667788999999999999999983 34488899999999999999999999 999
Q ss_pred ecCCCCCceEEcC-------CCceEEeecccccccCCC--CCCceecccccceeCCcccccCCcccchhhhhHHHHHHHH
Q 040501 87 HRDISSKNVLLDL-------EYEAHVSDFGIAKFIQPD--SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEV 157 (228)
Q Consensus 87 h~di~p~nil~~~-------~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~ 157 (228)
||||||+|+++.. ..-++|+|||.+-.+..- ........++..+-.+|+..|..++...|.|.|+.+++.|
T Consensus 817 HgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~m 896 (974)
T KOG1166|consen 817 HGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVM 896 (974)
T ss_pred cccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHH
Confidence 9999999999943 245899999998766432 2345667788899999999999999999999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHHhh
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLC 227 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 227 (228)
+.|+..-... .... .....++. . -...-+.+++..+|+.|-..=|...++...|+
T Consensus 897 LFG~y~q~~~--g~~~--------~~~~~~~R---y--~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~ 951 (974)
T KOG1166|consen 897 LFGKYMEVKN--GSSW--------MVKTNFPR---Y--WKRDMWNKFFDLLLNPDCDTLPNLQELRTELE 951 (974)
T ss_pred HHHHHHHhcC--Ccce--------eccccchh---h--hhHHHHHHHHHHHhCcCcccchhHHHHHHHHH
Confidence 9988762000 0000 00000000 0 01112456777788855544577777766654
No 426
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.70 E-value=2.3e-16 Score=127.24 Aligned_cols=147 Identities=20% Similarity=0.264 Sum_probs=115.2
Q ss_pred HHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
...+.++-|+.++||+|+++++.++.....|+|+|.+ ..|..++.+. ....+..-+.||+.||.+||+.|
T Consensus 55 ~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l------~~~~v~~Gl~qIl~AL~FL~~d~-- 124 (690)
T KOG1243|consen 55 LAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKEL------GKEEVCLGLFQILAALSFLNDDC-- 124 (690)
T ss_pred HHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHh------HHHHHHHHHHHHHHHHHHHhccC--
Confidence 4567889999999999999999999999999999988 3666666543 24556667899999999999775
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
+++|++++-+.|+++..|.+||++|.++................-.|..|+.+.... -..|.|.|||++++++.|..
T Consensus 125 ~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 125 NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCccc
Confidence 999999999999999999999999998876543332222223333466666543332 35699999999999999833
No 427
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.70 E-value=1.6e-17 Score=123.57 Aligned_cols=198 Identities=23% Similarity=0.342 Sum_probs=138.8
Q ss_pred HhccCCCccceeeeeeeec-----CeEEEEEEeecCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCe
Q 040501 12 LTEIRHRNIVKFYGFCTHA-----RHSFLVYEYLENGSLSVILNNDT-SAEELGWSRRINVIKGIAHALSYLHHDCIPPI 85 (228)
Q Consensus 12 l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i 85 (228)
|.++-|.||++++.|+.+. .+..++.||+..+++..++++.. ....+......+|+-|++.||.|||+. .+.+
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Ppi 199 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCcc
Confidence 3445699999999998543 45788999999999999998633 233467777789999999999999995 5689
Q ss_pred eecCCCCCceEEcCCCceEEeecccccccCCCC-----CCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhC
Q 040501 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS-----SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160 (228)
Q Consensus 86 ~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g 160 (228)
+|++++.+.|++..+|.+|++.-.-... .... .......+.+.|.+||.-.....+.++|||++|....+|..+
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~-h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDST-HPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred ccCCcchhheeecCCceEEecccCcccc-chhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 9999999999999999999863221110 0000 001123456789999987666778899999999999999877
Q ss_pred CCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 040501 161 KHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223 (228)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il 223 (228)
..-- .+..+.......+.+.....-... =..++.+|++..|..||++.+++
T Consensus 279 Eiq~--tnseS~~~~ee~ia~~i~~len~l----------qr~~i~kcl~~eP~~rp~ar~ll 329 (458)
T KOG1266|consen 279 EIQS--TNSESKVEVEENIANVIIGLENGL----------QRGSITKCLEGEPNGRPDARLLL 329 (458)
T ss_pred eecc--CCCcceeehhhhhhhheeeccCcc----------ccCcCcccccCCCCCCcchhhhh
Confidence 6641 122222223333333222211110 13678899999999999998875
No 428
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.69 E-value=3.5e-18 Score=141.15 Aligned_cols=207 Identities=23% Similarity=0.330 Sum_probs=157.4
Q ss_pred HHHHHHhccC-CCccceeeeeeeecCeEEEEEEeecCCChhhhhh-cCCCCCCCCHHHHHHHHHHHHHHHHHhh-hCCCC
Q 040501 7 REITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN-NDTSAEELGWSRRINVIKGIAHALSYLH-HDCIP 83 (228)
Q Consensus 7 ~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~lh-~~~~~ 83 (228)
.|..+-+.+. |.|++.+++.....+..+++.++..|+++.+.+. ... ...+...+-..+.|+..++.|+| ..
T Consensus 69 ~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~--~~~~~~~~~~~~~ql~s~l~~~H~~~--- 143 (601)
T KOG0590|consen 69 TETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDS--TGTSSSSASRYLPQLNSGLSYLHPEN--- 143 (601)
T ss_pred ccccccccccccccccccCCccCCCcccccccCcccccccccccccCCc--cCCCCcchhhhhhhhccCccccCccc---
Confidence 3666666675 9999999999999999999999999999998883 322 12555666789999999999999 77
Q ss_pred CeeecCCCCCceEEcCCC-ceEEeecccccccCC-CCCC--ceeccc-ccceeCCcccccCC-cccchhhhhHHHHHHHH
Q 040501 84 PIVHRDISSKNVLLDLEY-EAHVSDFGIAKFIQP-DSSN--WTEFAG-TYGYVAPELAYTMK-VTAKCDVYSFGVLALEV 157 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~-~~~l~df~~~~~~~~-~~~~--~~~~~~-~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~~ 157 (228)
++.|+|++|+|.+++..+ .+++.|||+++.... .... .....| ++.|.|||...+.. .....|+||.|+++..+
T Consensus 144 ~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~ 223 (601)
T KOG0590|consen 144 GVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAM 223 (601)
T ss_pred ccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCccccccccccccc
Confidence 999999999999999999 999999999987765 2222 233566 89999999988854 45678999999999999
Q ss_pred HhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 040501 158 IKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223 (228)
Q Consensus 158 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il 223 (228)
++|..||................. .......+........+++.+++..+|..|.+.+++.
T Consensus 224 ~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 224 LTGELPWDFPSRKDGRYSSWKSNK-----GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ccCCCCccccccccccceeecccc-----cccccCccccCChhhhhcccccccCCchhcccccccc
Confidence 999999875544332211111111 1111222334455677899999999999999988764
No 429
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.67 E-value=4.5e-16 Score=113.89 Aligned_cols=100 Identities=22% Similarity=0.419 Sum_probs=87.7
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
..+.+|++++..+.|+++.....++......+++|||++|++|.+++.... . ....++.+++.++.++|+.
T Consensus 44 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~-- 114 (211)
T PRK14879 44 ERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNG------M-EELELSREIGRLVGKLHSA-- 114 (211)
T ss_pred HHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhC--
Confidence 457889999999999998887777777778899999999999999886422 1 6778999999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
|++|+|++|.||+++ ++.++++|||.+..
T Consensus 115 -~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 115 -GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred -CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999999999 78899999998765
No 430
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.65 E-value=1.1e-15 Score=110.94 Aligned_cols=97 Identities=21% Similarity=0.419 Sum_probs=81.9
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+++.+|+++++.++|+++....-++......+++||+++|++|.+.+..... .++.+++.+|.++|+.
T Consensus 42 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~~----------~~~~~i~~~l~~lH~~-- 109 (199)
T TIGR03724 42 ERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGND----------ELLREIGRLVGKLHKA-- 109 (199)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcHH----------HHHHHHHHHHHHHHHC--
Confidence 4567899999999888766555555666677899999999999988753210 6889999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
|++|+|++|.||+++ ++.++++|||.+..
T Consensus 110 -gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 110 -GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred -CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999999999999 78999999998765
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.64 E-value=1e-15 Score=126.46 Aligned_cols=96 Identities=21% Similarity=0.380 Sum_probs=85.6
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 82 (228)
+++.+|+++++.++|++++....++......++||||+++++|.+++. ....++.+++.++.+||+.
T Consensus 381 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~-- 447 (535)
T PRK09605 381 ERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA-- 447 (535)
T ss_pred HHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC--
Confidence 467899999999999999888777777777899999999999998874 3457899999999999999
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
|++|||+||+||++ .++.++|+|||++..
T Consensus 448 -giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 448 -GIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred -CCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999999999 578899999999875
No 432
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.64 E-value=1.8e-15 Score=112.33 Aligned_cols=100 Identities=17% Similarity=0.281 Sum_probs=80.3
Q ss_pred HHHHHHHHHHhccCCCcc--ceeeeeeeecC----eEEEEEEeecC-CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIRHRNI--VKFYGFCTHAR----HSFLVYEYLEN-GSLSVILNNDTSAEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i--~~~~~~~~~~~----~~~lv~e~~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 75 (228)
.++.+|++++..++|++| ++.+++..... ..++|+|+++| .+|.+++.... ++.. .+.+++.++.
T Consensus 85 ~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~~----l~~~----~~~~i~~~l~ 156 (239)
T PRK01723 85 TRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEAP----LSEE----QWQAIGQLIA 156 (239)
T ss_pred hHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcCC----CCHH----HHHHHHHHHH
Confidence 567889999999988775 66776654322 23599999987 68888875421 3433 3578999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
+||+. ||+|+||||.||+++.++.++|+|||.+..
T Consensus 157 ~lH~~---GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 157 RFHDA---GVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred HHHHC---CCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 99999 999999999999999999999999998875
No 433
>smart00090 RIO RIO-like kinase.
Probab=99.64 E-value=1.6e-15 Score=112.37 Aligned_cols=101 Identities=19% Similarity=0.243 Sum_probs=79.2
Q ss_pred HHHHHHHHHhccCCC--ccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 4 EFLREITVLTEIRHR--NIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+|++.++++.+. .++++++. ...++|||++++.+|........ .....++..++.|++.++.+||+.
T Consensus 96 ~~~~E~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~- 167 (237)
T smart00090 96 WAEKEFRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV---EPEEEEEFELYDDILEEMRKLYKE- 167 (237)
T ss_pred HHHHHHHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCcccccccccC---CcchHHHHHHHHHHHHHHHHHHhc-
Confidence 356899999999753 34455543 23489999999988866542222 245566778999999999999999
Q ss_pred CCC-eeecCCCCCceEEcCCCceEEeecccccccC
Q 040501 82 IPP-IVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115 (228)
Q Consensus 82 ~~~-i~h~di~p~nil~~~~~~~~l~df~~~~~~~ 115 (228)
| ++|+||||+||+++ ++.++++|||.+...+
T Consensus 168 --g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 168 --GELVHGDLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred --CCEEeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence 9 99999999999999 8899999999887543
No 434
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.55 E-value=2.9e-14 Score=103.27 Aligned_cols=96 Identities=18% Similarity=0.209 Sum_probs=77.3
Q ss_pred HHHHHHHHHhccCCC--ccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 4 EFLREITVLTEIRHR--NIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.+.+|+.++..+.++ .+++.++. ...+++|||++|++|...... .....++.+++.++.++|+.
T Consensus 79 ~~~~E~~~l~~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~- 144 (198)
T cd05144 79 AAQKEFAALKALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH- 144 (198)
T ss_pred HHHHHHHHHHHHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC-
Confidence 467899999999776 44444442 345899999999988765321 23457889999999999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~ 115 (228)
|++|+||+|+||+++.++.++|+|||.+....
T Consensus 145 --gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 145 --GIIHGDLSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred --CCCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999999999999986544
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.52 E-value=1.2e-13 Score=95.48 Aligned_cols=101 Identities=20% Similarity=0.298 Sum_probs=85.4
Q ss_pred HHHHHHHHHHhccCC--CccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 3 KEFLREITVLTEIRH--RNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
..+.+|+..++.+++ .++++++.++..++..++++|++.+..+..+ +......++.+++++++.+|..
T Consensus 36 ~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~ 105 (155)
T cd05120 36 ADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV----------SEEEKEDIAEQLAELLAKLHQL 105 (155)
T ss_pred hHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC----------CHHHHHHHHHHHHHHHHHHhCC
Confidence 468899999999976 5899999988887889999999988766543 3455567889999999999996
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
...+++|+|++|.||+++..+.++++||+.+..
T Consensus 106 ~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 106 PLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 323799999999999999989999999998764
No 436
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.50 E-value=1.6e-12 Score=100.52 Aligned_cols=193 Identities=17% Similarity=0.237 Sum_probs=136.6
Q ss_pred CeEEEEEEeecCC-Chhhhh---hcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEe
Q 040501 31 RHSFLVYEYLENG-SLSVIL---NNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVS 106 (228)
Q Consensus 31 ~~~~lv~e~~~~~-~L~~~~---~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~ 106 (228)
....++|+.+++. ....+. .+..+.+.+++...++.++.++.+.+.||.. |.+-+|++++|+|+++++.+.+.
T Consensus 83 ~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LV 159 (637)
T COG4248 83 KVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLV 159 (637)
T ss_pred ceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEE
Confidence 3477888887663 233333 2345556688999999999999999999999 99999999999999999999998
Q ss_pred ecccccccCCCCCCceecccccceeCCcccc-----cCCcccchhhhhHHHHHHHHHhC-CCCccccccccCC-Cchh--
Q 040501 107 DFGIAKFIQPDSSNWTEFAGTYGYVAPELAY-----TMKVTAKCDVYSFGVLALEVIKG-KHPRDFLSNVSSS-NPNI-- 177 (228)
Q Consensus 107 df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~DiwslG~~l~~~~~g-~~p~~~~~~~~~~-~~~~-- 177 (228)
|-..-... .+......+.|...|.+||.-. +..-+..+|.|.||+++++++.| ..||......... ++.+
T Consensus 160 dsDsfqi~-~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~ 238 (637)
T COG4248 160 DSDSFQIN-ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETD 238 (637)
T ss_pred cccceeec-cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhh
Confidence 75543332 3444456678899999999644 23345679999999999999876 9998655432211 1111
Q ss_pred --------hhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhcc--CCCCCCCHHHHHHHhh
Q 040501 178 --------LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDN--NPESRPNMQTICQLLC 227 (228)
Q Consensus 178 --------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~--~p~~Rpt~~~il~~l~ 227 (228)
...+..-.+.++....+.-.+.++..++.+|+.. ++.-|||++.++..|.
T Consensus 239 Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~ 298 (637)
T COG4248 239 IAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALD 298 (637)
T ss_pred hhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Confidence 0011111222334444566777889999999964 4778999999887763
No 437
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.48 E-value=1.1e-13 Score=110.67 Aligned_cols=203 Identities=26% Similarity=0.240 Sum_probs=146.8
Q ss_pred HHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHH----HHHHhhhC
Q 040501 6 LREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAH----ALSYLHHD 80 (228)
Q Consensus 6 ~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~----~l~~lh~~ 80 (228)
.+|+..-+.+ .|++.++....++..+..++=.|.++ .+|..+...... .++...++..+.+... |+.++|+.
T Consensus 165 ~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~-~sl~~~~~~~~~--~~p~~~l~~~~~~~~~~~~~al~~~hs~ 241 (524)
T KOG0601|consen 165 LREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELCG-ESLQSYCHTPCN--FLPDNLLWNSLRDWLSRDVTALSHLHSN 241 (524)
T ss_pred cchhhcccccCccccccccCcccccCCcceeeecccc-chhHHhhhcccc--cCCchhhhhHHhhhhhcccccccccCCC
Confidence 3566666667 48999998888888899999999885 577666654322 2566777777788777 99999999
Q ss_pred CCCCeeecCCCCCceEEcCC-CceEEeecccccccCCCCCCcee-----cccccceeCCcccccCCcccchhhhhHHHHH
Q 040501 81 CIPPIVHRDISSKNVLLDLE-YEAHVSDFGIAKFIQPDSSNWTE-----FAGTYGYVAPELAYTMKVTAKCDVYSFGVLA 154 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l 154 (228)
+++|.|++|.||+...+ ...+++||++...++........ ..+...|++||...+ .++..+|++++|.++
T Consensus 242 ---~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~ 317 (524)
T KOG0601|consen 242 ---NIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVI 317 (524)
T ss_pred ---cccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhh
Confidence 99999999999999999 88899999999988766644322 367788999997554 478899999999999
Q ss_pred HHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 040501 155 LEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224 (228)
Q Consensus 155 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 224 (228)
.+...+..+.-.. .......... ...+. ....+...++...+.+|++.+|..|++++.+..
T Consensus 318 l~~~l~~~~~~~g-~~~~W~~~r~------~~ip~--e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 318 LEAILGSHLPSVG-KNSSWSQLRQ------GYIPL--EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred HhhHhhcccccCC-CCCCcccccc------ccCch--hhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 9988776653211 0011111111 11111 111233345566899999999999999887754
No 438
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.40 E-value=2.6e-12 Score=89.03 Aligned_cols=98 Identities=23% Similarity=0.419 Sum_probs=82.1
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
+.+-.+|+.++.+++-.+|....-++.+.....|+|||+.|..|.+.+... ...++..+-.-+.-||..
T Consensus 43 r~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~- 111 (204)
T COG3642 43 RERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA----------RPDLLREVGRLVGKLHKA- 111 (204)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc----------chHHHHHHHHHHHHHHhc-
Confidence 345678999999998777777666677777788999999999999888654 135777888889999999
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
||+|+|++++||+++.++ +.++|||++..
T Consensus 112 --givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 112 --GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred --CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999999999999998765 89999999875
No 439
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.36 E-value=9.2e-12 Score=88.85 Aligned_cols=99 Identities=15% Similarity=0.180 Sum_probs=74.2
Q ss_pred HHHHHHHHhccCC--CccceeeeeeeecCeEEEEEEeecCCChhh-hhhcCCCCCCCCHHHHHHHHHHHHHHHHHh-hhC
Q 040501 5 FLREITVLTEIRH--RNIVKFYGFCTHARHSFLVYEYLENGSLSV-ILNNDTSAEELGWSRRINVIKGIAHALSYL-HHD 80 (228)
Q Consensus 5 ~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l-h~~ 80 (228)
..+|++.|+++.. -++++++++ ..-++|||++.+..+.. .+.. ..++..+...+..+++.++..| |+.
T Consensus 73 a~kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H~~ 144 (197)
T cd05146 73 AEKEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYKEC 144 (197)
T ss_pred HHHHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3489999999953 566777764 45679999997653321 1221 1144456667889999999998 888
Q ss_pred CCCCeeecCCCCCceEEcCCCceEEeecccccccC
Q 040501 81 CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~ 115 (228)
|++|+|+++.||++. ++.+.|+||+.+....
T Consensus 145 ---glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 145 ---NLVHADLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred ---CeecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 999999999999997 4689999999887654
No 440
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.34 E-value=7.2e-12 Score=89.90 Aligned_cols=97 Identities=21% Similarity=0.249 Sum_probs=70.3
Q ss_pred HHHHHHHhccCCC--ccceeeeeeeecCeEEEEEEeecCCChhh-hhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh-CC
Q 040501 6 LREITVLTEIRHR--NIVKFYGFCTHARHSFLVYEYLENGSLSV-ILNNDTSAEELGWSRRINVIKGIAHALSYLHH-DC 81 (228)
Q Consensus 6 ~~E~~~l~~l~h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~ 81 (228)
..|.+.+..+.+. .+.++++. ...+++|||++++++.. .+.... .. ..+..++.+++.++.++|+ .
T Consensus 65 ~~e~~~l~~l~~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~- 134 (187)
T cd05119 65 EKEFRNLKRLYEAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREA- 134 (187)
T ss_pred HHHHHHHHHHHHcCCCCCceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhcc-
Confidence 3566666666443 34444443 23589999999854321 111110 11 5677899999999999999 8
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~ 115 (228)
|++|+||+|+||+++ ++.++++|||.+....
T Consensus 135 --~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 135 --GLVHGDLSEYNILVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred --CcCcCCCChhhEEEE-CCcEEEEECccccccc
Confidence 999999999999999 8899999999987544
No 441
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.28 E-value=1.4e-12 Score=106.02 Aligned_cols=150 Identities=17% Similarity=0.245 Sum_probs=103.9
Q ss_pred HHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCC----ce-----ecccccceeCCcccc
Q 040501 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN----WT-----EFAGTYGYVAPELAY 137 (228)
Q Consensus 67 ~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~----~~-----~~~~~~~y~aPE~~~ 137 (228)
+.+++.|+.++|.. ++++|++|.|++|.++..|.+|+..|+.+.....+... +. .......|.+||++.
T Consensus 105 l~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 34566889999998 69999999999999999999999999987655432221 11 012245699999999
Q ss_pred cCCcccchhhhhHHHHHHHHHh-CCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCC
Q 040501 138 TMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216 (228)
Q Consensus 138 ~~~~~~~~DiwslG~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 216 (228)
....+.++|+||+|+++|.+.. |+.-+...+......... .. .... ......+.+.++.+=+.+++..++.-|
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~---~~--~~~~-~~~~s~~~p~el~~~l~k~l~~~~~~r 256 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSR---NL--LNAG-AFGYSNNLPSELRESLKKLLNGDSAVR 256 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhh---cc--cccc-cccccccCcHHHHHHHHHHhcCCcccC
Confidence 9888899999999999999984 444433221111110000 00 0110 111114667789999999999999999
Q ss_pred CCHHHHHH
Q 040501 217 PNMQTICQ 224 (228)
Q Consensus 217 pt~~~il~ 224 (228)
|++..+..
T Consensus 257 p~~~~l~~ 264 (700)
T KOG2137|consen 257 PTLDLLLS 264 (700)
T ss_pred cchhhhhc
Confidence 98776654
No 442
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.25 E-value=9.4e-11 Score=81.23 Aligned_cols=109 Identities=17% Similarity=0.269 Sum_probs=85.0
Q ss_pred hHHHHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecC-CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLEN-GSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
+++-.+|++.|.+++--+|.-..-+|.+...-.|+|||+.| .++.+++........ .......++..+-+.+..||..
T Consensus 54 r~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~-~d~~~~~~~~~iG~~igklH~n 132 (229)
T KOG3087|consen 54 RKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDES-EDEGLAELARRIGELIGKLHDN 132 (229)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcc-cchhHHHHHHHHHHHHHHhhhC
Confidence 56778999999999766776666667666667799999977 478888776544432 2233367889999999999999
Q ss_pred CCCCeeecCCCCCceEEcCCCc---eEEeeccccccc
Q 040501 81 CIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKFI 114 (228)
Q Consensus 81 ~~~~i~h~di~p~nil~~~~~~---~~l~df~~~~~~ 114 (228)
+++|+||+.+||++..++. +.++|||++...
T Consensus 133 ---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 133 ---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred ---CeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 9999999999999976643 478999998754
No 443
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.25 E-value=7.5e-11 Score=88.67 Aligned_cols=106 Identities=23% Similarity=0.227 Sum_probs=82.1
Q ss_pred HHHHHHHHHhccCCCcc--ceeeeeeee-----cCeEEEEEEeecCC-ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 040501 4 EFLREITVLTEIRHRNI--VKFYGFCTH-----ARHSFLVYEYLENG-SLSVILNNDTSAEELGWSRRINVIKGIAHALS 75 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i--~~~~~~~~~-----~~~~~lv~e~~~~~-~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 75 (228)
.+.+|...+.++...+| ++++.+++. ....++|+|++++. +|.+++..... ...+......++.+++..+.
T Consensus 74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~ 152 (268)
T PRK15123 74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVR 152 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHH
Confidence 47899999999964444 444666643 23578999999875 78888754221 22456677789999999999
Q ss_pred HhhhCCCCCeeecCCCCCceEEcC-------CCceEEeecccccc
Q 040501 76 YLHHDCIPPIVHRDISSKNVLLDL-------EYEAHVSDFGIAKF 113 (228)
Q Consensus 76 ~lh~~~~~~i~h~di~p~nil~~~-------~~~~~l~df~~~~~ 113 (228)
.||.. |++|+|+++.||+++. +..+.++||+.+..
T Consensus 153 ~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 153 DMHAA---GINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHHC---cCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 99999 9999999999999975 46789999998753
No 444
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.23 E-value=3.4e-11 Score=84.97 Aligned_cols=96 Identities=23% Similarity=0.215 Sum_probs=70.3
Q ss_pred HHHHHHHHHhccCCCcc-ceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC-
Q 040501 4 EFLREITVLTEIRHRNI-VKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC- 81 (228)
Q Consensus 4 ~~~~E~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~- 81 (228)
.+.+|+.+++.+.+.++ ++++.... ...++|||+++|.++...- . .....+.+++.+++.||+..
T Consensus 38 ~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~~~~--------~---~~~~~~~~l~~~l~~LH~~~~ 104 (170)
T cd05151 38 NRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELLTED--------F---SDPENLEKIAKLLKKLHSSPL 104 (170)
T ss_pred CHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcccccc--------c---cCHHHHHHHHHHHHHHhCCCC
Confidence 46789999999965444 45555433 3457999999998775430 1 11235678999999999982
Q ss_pred -CCCeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 82 -IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 82 -~~~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
..+++|+|++|.||+++ ++.++++||+.+..
T Consensus 105 ~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 105 PDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 11259999999999999 67899999998764
No 445
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.23 E-value=4.6e-12 Score=107.30 Aligned_cols=191 Identities=22% Similarity=0.283 Sum_probs=139.6
Q ss_pred CCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeecCCCCCceE
Q 040501 17 HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVL 96 (228)
Q Consensus 17 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~di~p~nil 96 (228)
+|-++...-.+......+++++++.+++|...++..+. .+..-+......+..+..+||+. .+.|+|++|.|.+
T Consensus 863 ~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~---~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l 936 (1205)
T KOG0606|consen 863 SPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGC---LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLL 936 (1205)
T ss_pred CCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCC---cccccccchhHHHHhhhhccccc---hhhcccccccchh
Confidence 34444444445556778999999999999998876442 34444555677788999999998 8999999999999
Q ss_pred EcCCCceEEeecccccccCCC----------C---------------------CCceecccccceeCCcccccCCcccch
Q 040501 97 LDLEYEAHVSDFGIAKFIQPD----------S---------------------SNWTEFAGTYGYVAPELAYTMKVTAKC 145 (228)
Q Consensus 97 ~~~~~~~~l~df~~~~~~~~~----------~---------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~ 145 (228)
...+|..++.||+.....+.. . .......+++.|.+||...+......+
T Consensus 937 ~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~a 1016 (1205)
T KOG0606|consen 937 IAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAA 1016 (1205)
T ss_pred hcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcc
Confidence 999999999999733322210 0 001224578899999999999999999
Q ss_pred hhhhHHHHHHHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHH
Q 040501 146 DVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQ 220 (228)
Q Consensus 146 DiwslG~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 220 (228)
|.|+.|+.+++.++|.+||.. ......+..+.....+... .....+....+++...+..+|.+|..+.
T Consensus 1017 d~~~~g~~l~e~l~g~pp~na------~tpq~~f~ni~~~~~~~p~-g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1017 DWWSSGVCLFEVLTGIPPFNA------ETPQQIFENILNRDIPWPE-GPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhhhhhhhhhhhcCCCCCCC------cchhhhhhccccCCCCCCC-CccccChhhhhhhhhhhccCchhccCcc
Confidence 999999999999999999753 3334445555554443322 2233445677899999999999997765
No 446
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.19 E-value=1.4e-10 Score=82.41 Aligned_cols=101 Identities=25% Similarity=0.333 Sum_probs=67.6
Q ss_pred hHHHHHHHHHHhccCCC--ccceeeeeeeecCeEEEEEEeec--CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH-
Q 040501 2 KKEFLREITVLTEIRHR--NIVKFYGFCTHARHSFLVYEYLE--NGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY- 76 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~--~i~~~~~~~~~~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~- 76 (228)
+.+..+|++.|+++... ++++++++- .-.+||||++ |..+..+.... ++......++.+++..+..
T Consensus 52 ~~~~~~E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~ 122 (188)
T PF01163_consen 52 REWAKKEFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKM 122 (188)
T ss_dssp HHHHHHHHHHHHHCCCTT-SS--EEEEE----TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCccCCcEEEEe----CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHH
Confidence 35678999999999765 566766552 2359999998 65565544322 1123445677788885555
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccC
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~ 115 (228)
+|.. |++|||+++.||+++.+ .+.++|||.+....
T Consensus 123 ~~~~---givHGDLs~~NIlv~~~-~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 123 LHKA---GIVHGDLSEYNILVDDG-KVYIIDFGQAVDSS 157 (188)
T ss_dssp HHCT---TEEESS-STTSEEEETT-CEEE--GTTEEETT
T ss_pred HHhc---CceecCCChhhEEeecc-eEEEEecCcceecC
Confidence 5788 99999999999999987 89999999887644
No 447
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.19 E-value=7.4e-11 Score=95.02 Aligned_cols=104 Identities=21% Similarity=0.269 Sum_probs=72.3
Q ss_pred HHHHHHHHHhccC----CCccceeeeee-eecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHH-HHHHh
Q 040501 4 EFLREITVLTEIR----HRNIVKFYGFC-THARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAH-ALSYL 77 (228)
Q Consensus 4 ~~~~E~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~l 77 (228)
+|.+|++.+.+++ +.+-+.+-..+ ......++||||++|.+|.+........ .+ ...++..++. .+..+
T Consensus 199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~--~~---~~~ia~~~~~~~l~ql 273 (437)
T TIGR01982 199 DLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG--LD---RKALAENLARSFLNQV 273 (437)
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC--CC---HHHHHHHHHHHHHHHH
Confidence 4667777777763 22222222222 2234568999999999998876532111 22 2345555555 46788
Q ss_pred hhCCCCCeeecCCCCCceEEcCCCceEEeecccccccC
Q 040501 78 HHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115 (228)
Q Consensus 78 h~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~ 115 (228)
|.. |++|+|++|.||+++.+|.++++|||++...+
T Consensus 274 ~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 274 LRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 998 99999999999999999999999999998765
No 448
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=99.17 E-value=4.6e-10 Score=81.71 Aligned_cols=107 Identities=22% Similarity=0.309 Sum_probs=84.7
Q ss_pred hHHHHHHHHHHhccCCC--ccceeeeeeeec----CeEEEEEEeecC-CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHH
Q 040501 2 KKEFLREITVLTEIRHR--NIVKFYGFCTHA----RHSFLVYEYLEN-GSLSVILNNDTSAEELGWSRRINVIKGIAHAL 74 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~--~i~~~~~~~~~~----~~~~lv~e~~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 74 (228)
+.+..+|...+..+... .+++++++.+.. ...++|+|.+++ .+|.+++..... .+......++.+++..+
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLI 131 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHH
Confidence 34678899999988543 345666766543 356899999987 478888875332 45566778999999999
Q ss_pred HHhhhCCCCCeeecCCCCCceEEcCCC---ceEEeeccccccc
Q 040501 75 SYLHHDCIPPIVHRDISSKNVLLDLEY---EAHVSDFGIAKFI 114 (228)
Q Consensus 75 ~~lh~~~~~~i~h~di~p~nil~~~~~---~~~l~df~~~~~~ 114 (228)
+-||.. |++|+|+++.|||++.++ .+.++||+.+...
T Consensus 132 ~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 132 AKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 999999 999999999999999887 7899999987653
No 449
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.10 E-value=6.2e-11 Score=95.06 Aligned_cols=198 Identities=20% Similarity=0.258 Sum_probs=140.0
Q ss_pred HHHHHHHhcc-CCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCC
Q 040501 6 LREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPP 84 (228)
Q Consensus 6 ~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~ 84 (228)
..|+.+...+ .|.+++.+...+......|+=.|||+++++...+.... -+.+...+.+..|++.++.++|+. .
T Consensus 313 l~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~---~~d~~~~~~~~~q~~~~l~~i~s~---~ 386 (524)
T KOG0601|consen 313 LGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQ---MLDEDPRLRLTAQILTALNVIHSK---L 386 (524)
T ss_pred hhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHH---hcCcchhhhhHHHHHhccccccch---h
Confidence 3566666666 58999999888888888889999999988776663322 266778889999999999999999 9
Q ss_pred eeecCCCCCceEEcCC-CceEEeecccccccCCCCCCceeccccccee--CCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 85 IVHRDISSKNVLLDLE-YEAHVSDFGIAKFIQPDSSNWTEFAGTYGYV--APELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 85 i~h~di~p~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~--aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
++|.|++|+||++..+ +..+++||+..+........ ......+. ++.......+..+.|+++||.-+.+..++.
T Consensus 387 ~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~---~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~ 463 (524)
T KOG0601|consen 387 FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGV---FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGS 463 (524)
T ss_pred hhcccccccceeeccchhhhhccccccccccceeccc---ccccccccccchhhccccccccccccccccccccccccCc
Confidence 9999999999999886 66788999988753322211 12222333 444444556778999999999999998876
Q ss_pred CCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
..-... .....+..+..+... +....+..+.+.++.+++..||.+.++...
T Consensus 464 ~ls~~~---------~~~~~i~~~~~p~~~----~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~ 514 (524)
T KOG0601|consen 464 PLSESG---------VQSLTIRSGDTPNLP----GLKLQLQVLLKVMINPDRKRRPSAVELSLH 514 (524)
T ss_pred ccCccc---------ccceeeecccccCCC----chHHhhhhhhhhhcCCccccchhhhhhccc
Confidence 642111 111222222222222 222456778888999999999998876543
No 450
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.09 E-value=8e-10 Score=90.47 Aligned_cols=101 Identities=15% Similarity=0.199 Sum_probs=62.6
Q ss_pred HHHHHHHHhccC----CCccceeeeeee-ecCeEEEEEEeecCCChhhhh--hcCC-CCCCCCHHHHHHHHHHHHHHHHH
Q 040501 5 FLREITVLTEIR----HRNIVKFYGFCT-HARHSFLVYEYLENGSLSVIL--NNDT-SAEELGWSRRINVIKGIAHALSY 76 (228)
Q Consensus 5 ~~~E~~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~--~~~~-~~~~~~~~~~~~~~~~l~~~l~~ 76 (228)
|.+|+..+.+++ +...+.+-.++. ....-++||||+.|+.+.+.- ...+ ..+.+....+..++.|+
T Consensus 203 ~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi------ 276 (537)
T PRK04750 203 LMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV------ 276 (537)
T ss_pred HHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH------
Confidence 445555555552 333333333332 234567999999999997742 2211 11112223333333443
Q ss_pred hhhCCCCCeeecCCCCCceEEcCCC----ceEEeecccccccC
Q 040501 77 LHHDCIPPIVHRDISSKNVLLDLEY----EAHVSDFGIAKFIQ 115 (228)
Q Consensus 77 lh~~~~~~i~h~di~p~nil~~~~~----~~~l~df~~~~~~~ 115 (228)
... |++|+|++|.||+++.+| .++++|||++...+
T Consensus 277 -f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 -FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred -HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 456 999999999999999888 99999999987654
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.02 E-value=1.4e-09 Score=80.14 Aligned_cols=99 Identities=22% Similarity=0.238 Sum_probs=76.0
Q ss_pred hHHHHHHHHHHhccCCC--ccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 040501 2 KKEFLREITVLTEIRHR--NIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH 79 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 79 (228)
|....+|.++|++|... .+++.+++ ++-.+|||++.|..|...- ++....-.++..++..+...-.
T Consensus 153 Rl~A~rEf~~L~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~ 220 (304)
T COG0478 153 RLAAEREFEALQRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYR 220 (304)
T ss_pred HHHHHHHHHHHHHhhhcCCCCCCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHH
Confidence 56788999999999654 78888776 4566999999987665432 1223334456666666666667
Q ss_pred CCCCCeeecCCCCCceEEcCCCceEEeecccccccC
Q 040501 80 DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115 (228)
Q Consensus 80 ~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~ 115 (228)
. |++|+|+++-||+++.+|.+.++||..+...+
T Consensus 221 ~---GiVHGDlSefNIlV~~dg~~~vIDwPQ~v~~~ 253 (304)
T COG0478 221 R---GIVHGDLSEFNILVTEDGDIVVIDWPQAVPIS 253 (304)
T ss_pred c---CccccCCchheEEEecCCCEEEEeCcccccCC
Confidence 7 99999999999999999999999999876544
No 452
>PRK09902 hypothetical protein; Provisional
Probab=98.99 E-value=5e-09 Score=75.17 Aligned_cols=107 Identities=18% Similarity=0.197 Sum_probs=82.0
Q ss_pred hHHHHHHHHHHhccCC--Cccceeeeeee-e----cCeEEEEEEeecC-CChhhhhhcCCCCCCCCHHHHHHHHHHHHHH
Q 040501 2 KKEFLREITVLTEIRH--RNIVKFYGFCT-H----ARHSFLVYEYLEN-GSLSVILNNDTSAEELGWSRRINVIKGIAHA 73 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h--~~i~~~~~~~~-~----~~~~~lv~e~~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 73 (228)
+..|.+|+..++++.. -.+++++ ++. . ....+||+|-+++ .+|.+++..... ...+......++.+++.+
T Consensus 63 ~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~-~~~~~~~k~~il~~va~~ 140 (216)
T PRK09902 63 RPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAV-SPYSDEVRQAMLKAVALA 140 (216)
T ss_pred chHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCc-CCcchHHHHHHHHHHHHH
Confidence 4679999999999953 3355555 332 1 2357899997754 588888765432 235677778899999999
Q ss_pred HHHhhhCCCCCeeecCCCCCceEEcCCCc--eEEeecccccc
Q 040501 74 LSYLHHDCIPPIVHRDISSKNVLLDLEYE--AHVSDFGIAKF 113 (228)
Q Consensus 74 l~~lh~~~~~~i~h~di~p~nil~~~~~~--~~l~df~~~~~ 113 (228)
++-||+. |+.|+|+.+.||+++.+|. +.++||.-++.
T Consensus 141 ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 141 FKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred HHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 9999999 9999999999999987777 89999986654
No 453
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.97 E-value=3e-08 Score=79.11 Aligned_cols=181 Identities=16% Similarity=0.204 Sum_probs=126.1
Q ss_pred HHHHHhccCCCccceeeeeee----ecCeEEEEEEeecC-CChhhhhhcCC------------CCCCCCHHHHHHHHHHH
Q 040501 8 EITVLTEIRHRNIVKFYGFCT----HARHSFLVYEYLEN-GSLSVILNNDT------------SAEELGWSRRINVIKGI 70 (228)
Q Consensus 8 E~~~l~~l~h~~i~~~~~~~~----~~~~~~lv~e~~~~-~~L~~~~~~~~------------~~~~~~~~~~~~~~~~l 70 (228)
-++.++++.|.|+|++.++|. .+..+++|++|.++ .+|.++.-... .....++..+|.++.|+
T Consensus 323 lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QL 402 (655)
T KOG3741|consen 323 LVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQL 402 (655)
T ss_pred HHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHH
Confidence 478899999999999999986 34578899999875 56766653321 12246789999999999
Q ss_pred HHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhH
Q 040501 71 AHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSF 150 (228)
Q Consensus 71 ~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diwsl 150 (228)
..||.++|+. |..-+-+.|.+|+++.+.+++|..-|.......+. . +-+.+ ..+.|.-.|
T Consensus 403 taaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~------------~--~~le~---~Qq~D~~~l 462 (655)
T KOG3741|consen 403 TAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP------------T--EPLES---QQQNDLRDL 462 (655)
T ss_pred HHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeecCCC------------C--cchhH---HhhhhHHHH
Confidence 9999999999 99999999999999998889988666554433222 0 11111 236788899
Q ss_pred HHHHHHHHhCCCCccccccccCCCchhh-hhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 151 GVLALEVIKGKHPRDFLSNVSSSNPNIL-VNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 151 G~~l~~~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
|.++..+.+|..--. ........ ... -...++.++.++|.-....++++ -++.+++..
T Consensus 463 G~ll~aLAt~~~ns~-----~~d~~~~s~~~~-----------I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 463 GLLLLALATGTENSN-----RTDSTQSSHLTR-----------ITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred HHHHHHHhhcccccc-----cccchHHHHHHH-----------hhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 999999999855410 00000001 111 11345667778888888888887 566666543
No 454
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.92 E-value=1.3e-08 Score=74.81 Aligned_cols=107 Identities=26% Similarity=0.337 Sum_probs=78.6
Q ss_pred HHHHHHHHHHhccCC--Cccceeeeeeeec---CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 040501 3 KEFLREITVLTEIRH--RNIVKFYGFCTHA---RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYL 77 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h--~~i~~~~~~~~~~---~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 77 (228)
..+.+|+++++.+++ ..+++++.+.... ...+++||++.|.++.+.+.. ..++..+...++.+++.++..|
T Consensus 40 ~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~l 115 (223)
T cd05154 40 HDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLR----PELSPEERRALARALADTLAAL 115 (223)
T ss_pred ccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999999965 3457777776654 267899999999888765421 1245556666677777777777
Q ss_pred hhCC-----------------------------------------------------CCCeeecCCCCCceEEcC--CCc
Q 040501 78 HHDC-----------------------------------------------------IPPIVHRDISSKNVLLDL--EYE 102 (228)
Q Consensus 78 h~~~-----------------------------------------------------~~~i~h~di~p~nil~~~--~~~ 102 (228)
|+.. +..++|+|+.|.||+++. ++.
T Consensus 116 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~ 195 (223)
T cd05154 116 HSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRV 195 (223)
T ss_pred hCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcE
Confidence 6421 235799999999999998 667
Q ss_pred eEEeecccccc
Q 040501 103 AHVSDFGIAKF 113 (228)
Q Consensus 103 ~~l~df~~~~~ 113 (228)
+.|+||+.+..
T Consensus 196 ~~iID~e~~~~ 206 (223)
T cd05154 196 VAVLDWELATL 206 (223)
T ss_pred EEEEecccccc
Confidence 89999998754
No 455
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.73 E-value=6.8e-08 Score=69.73 Aligned_cols=67 Identities=22% Similarity=0.286 Sum_probs=52.4
Q ss_pred CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeeccc
Q 040501 31 RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGI 110 (228)
Q Consensus 31 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~ 110 (228)
...+++|||++|..|.+... ++. .+...+.+++..+|+. |++|+|.+|.|++++.+ .++++|++.
T Consensus 116 ~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~-~i~iID~~~ 180 (229)
T PF06176_consen 116 SSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNN-GIRIIDTQG 180 (229)
T ss_pred eEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECC-cEEEEECcc
Confidence 35568999999988766532 222 2445677889999999 99999999999999865 489999986
Q ss_pred cc
Q 040501 111 AK 112 (228)
Q Consensus 111 ~~ 112 (228)
..
T Consensus 181 k~ 182 (229)
T PF06176_consen 181 KR 182 (229)
T ss_pred cc
Confidence 54
No 456
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.50 E-value=2.2e-06 Score=63.32 Aligned_cols=110 Identities=13% Similarity=0.163 Sum_probs=64.6
Q ss_pred HHHHHHHHHHhccCCCc--cceeeeeeeecCeEEEEEEeecCCC-hhhhh--------------hc-----CC-CCCCCC
Q 040501 3 KEFLREITVLTEIRHRN--IVKFYGFCTHARHSFLVYEYLENGS-LSVIL--------------NN-----DT-SAEELG 59 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~-L~~~~--------------~~-----~~-~~~~~~ 59 (228)
....+|.++++.+..-+ +++++.+.......+++||+++|.+ +.... .. +. .....+
T Consensus 37 ~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~ 116 (226)
T TIGR02172 37 ETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTST 116 (226)
T ss_pred HHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 45788999999996433 5778888888888889999999863 11111 10 10 000111
Q ss_pred HHHHHH-HHH----------HHHH-HHHHhhhC-CCCCeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 60 WSRRIN-VIK----------GIAH-ALSYLHHD-CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 60 ~~~~~~-~~~----------~l~~-~l~~lh~~-~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
...... +.. .+.. ...+|.+. ....++|+|+.|.||+++.++ +.++||+.+..
T Consensus 117 l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 117 FQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred HHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 111110 000 0111 11222211 122579999999999999888 99999997753
No 457
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.50 E-value=1.3e-06 Score=62.40 Aligned_cols=105 Identities=21% Similarity=0.235 Sum_probs=80.2
Q ss_pred HHHHHHHhccCC-CccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCC
Q 040501 6 LREITVLTEIRH-RNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPP 84 (228)
Q Consensus 6 ~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~ 84 (228)
..|.-+++.+++ +++++++|+|-. +++.|+.+.+++......-...-..++.++.+++.++++.+.+++..-...
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 358888999965 799999999953 368899976655322110001112689999999999999999999853336
Q ss_pred eeecCCCCCceEEcCCCceEEeeccccccc
Q 040501 85 IVHRDISSKNVLLDLEYEAHVSDFGIAKFI 114 (228)
Q Consensus 85 i~h~di~p~nil~~~~~~~~l~df~~~~~~ 114 (228)
+.-.|++++|+-++++|++|++|...+...
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 788899999999999999999999876654
No 458
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.46 E-value=8.7e-07 Score=77.16 Aligned_cols=194 Identities=19% Similarity=0.182 Sum_probs=130.5
Q ss_pred HHHHHHHhccCCCccceeeeeeeecCe----EEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 6 LREITVLTEIRHRNIVKFYGFCTHARH----SFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 6 ~~E~~~l~~l~h~~i~~~~~~~~~~~~----~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.-|+..+..+.|+|+..++.+..+... ..+..+++...++.+.+..... ++..+.+.+..++..|+.++|+.
T Consensus 230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~---i~~~~~r~~~~~~~~GL~~~h~~- 305 (1351)
T KOG1035|consen 230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGS---IPLETLRILHQKLLEGLAYLHSL- 305 (1351)
T ss_pred HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccc---cCHHHHHHHHHHHhhhHHHHHHh-
Confidence 457777888899999999988755432 2345577888888877765443 78899999999999999999998
Q ss_pred CCCeeecCCCCC---ceEEcCCCceEEe--ecccccccCCCCCCceecccccceeCCcccccCCcc--cchhhhhHHHHH
Q 040501 82 IPPIVHRDISSK---NVLLDLEYEAHVS--DFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVT--AKCDVYSFGVLA 154 (228)
Q Consensus 82 ~~~i~h~di~p~---nil~~~~~~~~l~--df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~--~~~DiwslG~~l 154 (228)
...|.-+..+ +.-.+..+.+.++ ||+.+........ ......+..+.++|........ ...|+|.+|.+.
T Consensus 306 --~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~-~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~ 382 (1351)
T KOG1035|consen 306 --SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK-SFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLL 382 (1351)
T ss_pred --ccceeEEecccccccccCccceeecchhhhcccccCCCccc-chhhcCccccccccccccccchhhhhhHHHHHHHHH
Confidence 6666655555 3333445566666 8887766553322 2223344556777766555443 347999999999
Q ss_pred HHHHhCCCCccccccccCCCchhhhhhhcCCCCCCCchhhhhhHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 040501 155 LEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225 (228)
Q Consensus 155 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 225 (228)
..+..|..+-.. .......++..... ...+...+|+..++++|+++.+++..
T Consensus 383 ~~~~~~~~i~~~-------------~~~~~~~l~~~~~~------~~~d~~~~~~~~~~~~Rl~~~~ll~~ 434 (1351)
T KOG1035|consen 383 LQLSQGEDISEK-------------SAVPVSLLDVLSTS------ELLDALPKCLDEDSEERLSALELLTH 434 (1351)
T ss_pred hhhhhcCccccc-------------ccchhhhhccccch------hhhhhhhhhcchhhhhccchhhhhhc
Confidence 998877665211 11111111111110 46688899999999999999998764
No 459
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.31 E-value=7.9e-06 Score=61.16 Aligned_cols=109 Identities=13% Similarity=0.122 Sum_probs=65.8
Q ss_pred HHHHHHHHHhccC-CCccceeeeeeeecCeEEEEEEeecCCChhhhh-------------------hcCCC-CCCCCH--
Q 040501 4 EFLREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVIL-------------------NNDTS-AEELGW-- 60 (228)
Q Consensus 4 ~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~-------------------~~~~~-~~~~~~-- 60 (228)
.+.+|+++++.+. +--+++++.+.......++||++++|.++.... +.... ...+..
T Consensus 37 ~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~ 116 (244)
T cd05150 37 ELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRL 116 (244)
T ss_pred chHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhH
Confidence 4678999999983 555677888777666789999999987765432 00000 000110
Q ss_pred HHHHHHHH--------------------HHHHHHHHhhhC----CCCCeeecCCCCCceEEcCCCceEEeeccccc
Q 040501 61 SRRINVIK--------------------GIAHALSYLHHD----CIPPIVHRDISSKNVLLDLEYEAHVSDFGIAK 112 (228)
Q Consensus 61 ~~~~~~~~--------------------~l~~~l~~lh~~----~~~~i~h~di~p~nil~~~~~~~~l~df~~~~ 112 (228)
........ .+...+..|-.. .+..++|+|+.|.||+++.++.+.|+||+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 117 DRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred HHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 00000000 011112222111 12368999999999999998778899999775
No 460
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.30 E-value=6.3e-06 Score=60.49 Aligned_cols=100 Identities=19% Similarity=0.243 Sum_probs=70.2
Q ss_pred HHHHHHHhccC--CCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 6 LREITVLTEIR--HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 6 ~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.+|+.-|+++. +-.+++.+.+.. -.+|||+++...+ -......-.+....+..+..++++.+.-|-.. +
T Consensus 116 ~kEf~NL~R~~eAGVrvP~Pi~~~~----nVLvMEfIg~~g~---pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~--a 186 (268)
T COG1718 116 RKEFRNLKRAYEAGVRVPEPIAFRN----NVLVMEFIGDDGL---PAPRLKDVPLELEEAEGLYEDVVEYMRRLYKE--A 186 (268)
T ss_pred HHHHHHHHHHHHcCCCCCCceeecC----CeEEEEeccCCCC---CCCCcccCCcCchhHHHHHHHHHHHHHHHHHh--c
Confidence 57888888884 445566666543 3489999965411 11111111123335667788888888888774 2
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~ 115 (228)
+++|+||+.-||++. ++.+.|+|++.+....
T Consensus 187 ~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 187 GLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred CcccccchhhheEEE-CCeEEEEECccccccC
Confidence 999999999999999 8899999999987654
No 461
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.28 E-value=4.6e-07 Score=74.32 Aligned_cols=148 Identities=22% Similarity=0.234 Sum_probs=107.8
Q ss_pred HHHHHHHhccCCCc-cceeeeeeeecCeEEEEEEeecCC-ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCC
Q 040501 6 LREITVLTEIRHRN-IVKFYGFCTHARHSFLVYEYLENG-SLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83 (228)
Q Consensus 6 ~~E~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~~~~~-~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 83 (228)
.-++++|.+++||| .+..++-++.....++.++++.++ +..... ..+...+..-+....++.-..+++++|+.
T Consensus 281 rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~--~~se~~~~~~~~~~~~r~et~~l~~l~~~--- 355 (829)
T KOG0576|consen 281 RLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEM--TVSEIALEQYQFAYPLRKETRPLAELHSS--- 355 (829)
T ss_pred HHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccccccC--ChhhHhhhhhhhhhhhhhhcccccccccc---
Confidence 45889999999999 777777777778899999998776 222111 11111233444556677777889999987
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCCC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~p 163 (228)
--+|+| ||+.++ +..+.++|+......... ..+...+++.++|||......+..+.|.|++|.-..++.-|.+|
T Consensus 356 ~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pP 429 (829)
T KOG0576|consen 356 YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPP 429 (829)
T ss_pred cccCcc----cccccc-cccccccccCCcccCccc-ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCC
Confidence 557887 666654 678888998776554332 34556789999999999999999999999999877777777776
Q ss_pred c
Q 040501 164 R 164 (228)
Q Consensus 164 ~ 164 (228)
.
T Consensus 430 r 430 (829)
T KOG0576|consen 430 R 430 (829)
T ss_pred C
Confidence 4
No 462
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.12 E-value=2.7e-05 Score=57.92 Aligned_cols=31 Identities=29% Similarity=0.397 Sum_probs=26.3
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
.+++|+|+.+.||+++.++..-|+||+.+..
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 3689999999999998776667999998754
No 463
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.05 E-value=2.3e-05 Score=64.34 Aligned_cols=105 Identities=18% Similarity=0.259 Sum_probs=66.5
Q ss_pred HHHHHHHHHhccC-----CCccceeeeee-eecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHh
Q 040501 4 EFLREITVLTEIR-----HRNIVKFYGFC-THARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYL 77 (228)
Q Consensus 4 ~~~~E~~~l~~l~-----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 77 (228)
++.+|+..+.+++ .+++ ++=.++ +-...-.++|||+.|..+.+...-.... .+...+...+.++ .+..+
T Consensus 207 Dy~~EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g--~d~k~ia~~~~~~--f~~q~ 281 (517)
T COG0661 207 DYRREAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG--IDRKELAELLVRA--FLRQL 281 (517)
T ss_pred CHHHHHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHhcC--CCHHHHHHHHHHH--HHHHH
Confidence 3556777766663 2333 222222 2334567999999998888875332221 4433333222221 12233
Q ss_pred hhCCCCCeeecCCCCCceEEcCCCceEEeecccccccCC
Q 040501 78 HHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116 (228)
Q Consensus 78 h~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~ 116 (228)
=.. |+.|+|..|.||++..+|++-+.|||+......
T Consensus 282 ~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 282 LRD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred Hhc---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 335 999999999999999999999999999877653
No 464
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.00 E-value=0.00013 Score=52.54 Aligned_cols=98 Identities=22% Similarity=0.331 Sum_probs=71.5
Q ss_pred HHHHHHHHHHhccC------CCccceeeeeeeecCeEEEEEEeecC------CChhhhhhcCCCCCCCCHHHHHHHHHHH
Q 040501 3 KEFLREITVLTEIR------HRNIVKFYGFCTHARHSFLVYEYLEN------GSLSVILNNDTSAEELGWSRRINVIKGI 70 (228)
Q Consensus 3 ~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~~lv~e~~~~------~~L~~~~~~~~~~~~~~~~~~~~~~~~l 70 (228)
++..+|+.....+. +.+|.+++++.+++....+|+|.+.+ -+|.+++.... ++. .+...+
T Consensus 56 ~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~----~~~----~~~~~L 127 (199)
T PF10707_consen 56 RQNRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG----LTE----ELRQAL 127 (199)
T ss_pred HHHHHHHHHHHHHhhccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC----ccH----HHHHHH
Confidence 45667777777766 88999999999999999999998743 26777775443 333 344445
Q ss_pred HHHHHHhhhCCCCCeeecCCCCCceEEcCC--C--ceEEee-cccc
Q 040501 71 AHALSYLHHDCIPPIVHRDISSKNVLLDLE--Y--EAHVSD-FGIA 111 (228)
Q Consensus 71 ~~~l~~lh~~~~~~i~h~di~p~nil~~~~--~--~~~l~d-f~~~ 111 (228)
-+-..+|-+. +|+.+|++|.||++... + .+.++| ||..
T Consensus 128 ~~f~~~l~~~---~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~ 170 (199)
T PF10707_consen 128 DEFKRYLLDH---HIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEK 170 (199)
T ss_pred HHHHHHHHHc---CCeecCCCcccEEEEecCCCceEEEEEeCCCCc
Confidence 5666777888 99999999999999644 2 466666 4433
No 465
>PLN02876 acyl-CoA dehydrogenase
Probab=97.94 E-value=0.00014 Score=63.79 Aligned_cols=113 Identities=21% Similarity=0.329 Sum_probs=68.6
Q ss_pred HHHHHHHHHHhccC-CCcc--ceeeeeeeec---CeEEEEEEeecCCChhhh--------------------hhc-CC-C
Q 040501 3 KEFLREITVLTEIR-HRNI--VKFYGFCTHA---RHSFLVYEYLENGSLSVI--------------------LNN-DT-S 54 (228)
Q Consensus 3 ~~~~~E~~~l~~l~-h~~i--~~~~~~~~~~---~~~~lv~e~~~~~~L~~~--------------------~~~-~~-~ 54 (228)
..+.+|+++++.+. |.++ ++++.++.+. ...|+|||+++|..+.+. +.. +. .
T Consensus 83 ~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd 162 (822)
T PLN02876 83 HAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSAD 162 (822)
T ss_pred HHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 35789999999995 6655 7778877654 467899999988653211 100 00 0
Q ss_pred C---------C--CCCHHHHHHHHHH---------------HHHHHHHhhhCCC--------CCeeecCCCCCceEEcCC
Q 040501 55 A---------E--ELGWSRRINVIKG---------------IAHALSYLHHDCI--------PPIVHRDISSKNVLLDLE 100 (228)
Q Consensus 55 ~---------~--~~~~~~~~~~~~~---------------l~~~l~~lh~~~~--------~~i~h~di~p~nil~~~~ 100 (228)
. . .....++..|..+ +...+.+|....+ ..++|+|+++.|++++.+
T Consensus 163 ~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~ 242 (822)
T PLN02876 163 VDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPT 242 (822)
T ss_pred chhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCC
Confidence 0 0 0111222222222 2234566644322 259999999999999853
Q ss_pred -Cc-eEEeecccccccC
Q 040501 101 -YE-AHVSDFGIAKFIQ 115 (228)
Q Consensus 101 -~~-~~l~df~~~~~~~ 115 (228)
+. .-|+||+.+....
T Consensus 243 ~~~v~aVLDWE~a~~Gd 259 (822)
T PLN02876 243 EDRVIGILDWELSTLGN 259 (822)
T ss_pred CCeEEEEEeeeccccCC
Confidence 33 5689999887643
No 466
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.82 E-value=0.00029 Score=52.05 Aligned_cols=45 Identities=22% Similarity=0.418 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhccCCC--ccceeeeeee---ecCeEEEEEEeecCCChhh
Q 040501 3 KEFLREITVLTEIRHR--NIVKFYGFCT---HARHSFLVYEYLENGSLSV 47 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~--~i~~~~~~~~---~~~~~~lv~e~~~~~~L~~ 47 (228)
..+.+|..+++.+... .+++++.... .....+++|+++.|..+..
T Consensus 35 ~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 84 (239)
T PF01636_consen 35 ERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDD 84 (239)
T ss_dssp HHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccc
Confidence 4677899999988533 3566666442 3345789999999987776
No 467
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.78 E-value=0.00016 Score=54.57 Aligned_cols=29 Identities=17% Similarity=0.222 Sum_probs=25.8
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
.++|+|+.|.||+++.++ +.++||+.+..
T Consensus 147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 147 APLHMDVHAYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred eeecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence 689999999999999877 78999998764
No 468
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.74 E-value=0.00019 Score=59.03 Aligned_cols=86 Identities=17% Similarity=0.237 Sum_probs=54.7
Q ss_pred cceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH-hhhCCCCCeeecCCCCCceEEc
Q 040501 20 IVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSY-LHHDCIPPIVHRDISSKNVLLD 98 (228)
Q Consensus 20 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-lh~~~~~~i~h~di~p~nil~~ 98 (228)
|++++-.+. ..-.++|||++|..+.|.-.-.. ..++... ++..+.++... +=.. |.+|+|-.|.||++.
T Consensus 266 VP~Vy~~~s--t~RVLtME~~~G~~i~Dl~~i~~--~gi~~~~---i~~~l~~~~~~qIf~~---GffHaDPHPGNilv~ 335 (538)
T KOG1235|consen 266 VPKVYWDLS--TKRVLTMEYVDGIKINDLDAIDK--RGISPHD---ILNKLVEAYLEQIFKT---GFFHADPHPGNILVR 335 (538)
T ss_pred CCeehhhcC--cceEEEEEecCCccCCCHHHHHH--cCCCHHH---HHHHHHHHHHHHHHhc---CCccCCCCCCcEEEe
Confidence 455544333 34569999999987766532111 1144443 33333333222 2233 999999999999998
Q ss_pred C----CCceEEeecccccccC
Q 040501 99 L----EYEAHVSDFGIAKFIQ 115 (228)
Q Consensus 99 ~----~~~~~l~df~~~~~~~ 115 (228)
. ++.+.+.|||+.....
T Consensus 336 ~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 336 PNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred cCCCCCccEEEEccccccccc
Confidence 4 5678999999987655
No 469
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.70 E-value=7.6e-05 Score=57.22 Aligned_cols=98 Identities=12% Similarity=0.128 Sum_probs=72.4
Q ss_pred hHHHHHHHHHHhccC-C-CccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhh
Q 040501 2 KKEFLREITVLTEIR-H-RNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHH 79 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~-h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 79 (228)
|=+..+|+..|+.|. | =-+++.+++ .+-++|||++.|.+|...-.- .+. -.+...++.-|--|..
T Consensus 154 Rlaa~kEfafmkaL~e~gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~v------~d~---~~ly~~lm~~Iv~la~ 220 (465)
T KOG2268|consen 154 RLAATKEFAFMKALYERGFPVPKPIDH----NRHCVVMELVDGYPLRQVRHV------EDP---PTLYDDLMGLIVRLAN 220 (465)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCcccc----cceeeHHHhhcccceeeeeec------CCh---HHHHHHHHHHHHHHHH
Confidence 445678999999994 3 345566655 456789999988877644321 111 2355567777778888
Q ss_pred CCCCCeeecCCCCCceEEcCCCceEEeecccccccC
Q 040501 80 DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115 (228)
Q Consensus 80 ~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~ 115 (228)
. |++|+|.+-=||++..++.+.++||.......
T Consensus 221 ~---GlIHgDFNEFNimv~dd~~i~vIDFPQmvS~s 253 (465)
T KOG2268|consen 221 H---GLIHGDFNEFNIMVKDDDKIVVIDFPQMVSTS 253 (465)
T ss_pred c---CceecccchheeEEecCCCEEEeechHhhccC
Confidence 8 99999999999999999999999999765544
No 470
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.59 E-value=6.6e-06 Score=74.08 Aligned_cols=158 Identities=15% Similarity=0.030 Sum_probs=109.6
Q ss_pred HHHHHhccCCCccceeeeeee--ecCeEEEEEEeecCCChhhhhhcCCCC-CCCCHHHHHHHHHHHHHHHHHhhhCCCC-
Q 040501 8 EITVLTEIRHRNIVKFYGFCT--HARHSFLVYEYLENGSLSVILNNDTSA-EELGWSRRINVIKGIAHALSYLHHDCIP- 83 (228)
Q Consensus 8 E~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~- 83 (228)
|..-++...|+++.....-.. ++..-|..++++.+|.+++.+-.+... +..+..-+...-.+......-+|+...-
T Consensus 1279 e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg 1358 (2724)
T KOG1826|consen 1279 ERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLG 1358 (2724)
T ss_pred hhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCC
Confidence 444444557777766655443 334568889999999999988654322 2233333333333335556666655311
Q ss_pred -CeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCCC
Q 040501 84 -PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162 (228)
Q Consensus 84 -~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~~ 162 (228)
-.+|+++++.|.++..+-.+++.++|+.+.............+++.|+.|+......++.++|+|..|+.+|....|..
T Consensus 1359 ~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~ 1438 (2724)
T KOG1826|consen 1359 NTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNA 1438 (2724)
T ss_pred ccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccH
Confidence 2589999999999999999999999998843333333445567888999998888888888999999999999988888
Q ss_pred Ccc
Q 040501 163 PRD 165 (228)
Q Consensus 163 p~~ 165 (228)
+|-
T Consensus 1439 ~fi 1441 (2724)
T KOG1826|consen 1439 YFI 1441 (2724)
T ss_pred HHH
Confidence 753
No 471
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=97.45 E-value=0.00026 Score=51.80 Aligned_cols=30 Identities=27% Similarity=0.519 Sum_probs=21.4
Q ss_pred CeeecCCCCCceEE-cCCCceEEeecccccc
Q 040501 84 PIVHRDISSKNVLL-DLEYEAHVSDFGIAKF 113 (228)
Q Consensus 84 ~i~h~di~p~nil~-~~~~~~~l~df~~~~~ 113 (228)
.++|+|+.+.||++ +.++.++++||..+..
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 57999999999999 8889999999998754
No 472
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.41 E-value=0.0015 Score=50.60 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=28.5
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccccC
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~~~ 115 (228)
.++|+|+.+.|++++.++-+-++||+.+....
T Consensus 199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD 230 (321)
T COG3173 199 VLVHGDYRPGNLIIDPGRPTGVLDWELATLGD 230 (321)
T ss_pred eeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence 47999999999999999889999999987643
No 473
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.35 E-value=0.0011 Score=46.51 Aligned_cols=96 Identities=16% Similarity=0.226 Sum_probs=68.0
Q ss_pred hHHHHHHHHHHhccCCCcc-ceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q 040501 2 KKEFLREITVLTEIRHRNI-VKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHD 80 (228)
Q Consensus 2 ~~~~~~E~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 80 (228)
|.++..|+++|+.+.-.++ .+++.+..+. +.|||+.|..|.++.... +. +-+..+++.---|...
T Consensus 59 r~~l~kEakiLeil~g~~~~p~vy~yg~~~----i~me~i~G~~L~~~~~~~------~r----k~l~~vlE~a~~LD~~ 124 (201)
T COG2112 59 RRNLEKEAKILEILAGEGVTPEVYFYGEDF----IRMEYIDGRPLGKLEIGG------DR----KHLLRVLEKAYKLDRL 124 (201)
T ss_pred hhhHHHHHHHHHHhhhcCCCceEEEechhh----hhhhhhcCcchhhhhhcc------cH----HHHHHHHHHHHHHHHh
Confidence 6788999999999976555 4555554443 559999998887765321 11 2334455665567777
Q ss_pred CCCCeeecCCC-CCceEEcCCCceEEeeccccccc
Q 040501 81 CIPPIVHRDIS-SKNVLLDLEYEAHVSDFGIAKFI 114 (228)
Q Consensus 81 ~~~~i~h~di~-p~nil~~~~~~~~l~df~~~~~~ 114 (228)
||-|+.|+ |....+..++.+.|+||..++..
T Consensus 125 ---GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k 156 (201)
T COG2112 125 ---GIEHGELSRPWKNVLVNDRDVYIIDFDSATFK 156 (201)
T ss_pred ---ccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence 99999986 66666666779999999988743
No 474
>PRK10593 hypothetical protein; Provisional
Probab=97.31 E-value=0.0037 Score=48.29 Aligned_cols=43 Identities=23% Similarity=0.241 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhccC-C--Cccceeeeeeee---cCeEEEEEEeecCCCh
Q 040501 3 KEFLREITVLTEIR-H--RNIVKFYGFCTH---ARHSFLVYEYLENGSL 45 (228)
Q Consensus 3 ~~~~~E~~~l~~l~-h--~~i~~~~~~~~~---~~~~~lv~e~~~~~~L 45 (228)
..+.+|.+.++.+. + -.++++++++.. .+..++|||+++|.++
T Consensus 52 ~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 52 GVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV 100 (297)
T ss_pred hHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence 46889999999994 3 468888987754 3568999999988654
No 475
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.21 E-value=0.0029 Score=48.77 Aligned_cols=31 Identities=32% Similarity=0.348 Sum_probs=27.1
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
.+++|+|+.|.|++++.++.+.|+||+.+..
T Consensus 175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 3799999999999999887778999997754
No 476
>PLN02236 choline kinase
Probab=97.07 E-value=0.0032 Score=49.70 Aligned_cols=30 Identities=20% Similarity=0.434 Sum_probs=26.3
Q ss_pred CeeecCCCCCceEEcC-CCceEEeecccccc
Q 040501 84 PIVHRDISSKNVLLDL-EYEAHVSDFGIAKF 113 (228)
Q Consensus 84 ~i~h~di~p~nil~~~-~~~~~l~df~~~~~ 113 (228)
.++|+|+++.||++++ ++.+.++||..+..
T Consensus 201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 201 GFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred eEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 6899999999999986 46799999998764
No 477
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.96 E-value=0.0016 Score=53.15 Aligned_cols=160 Identities=19% Similarity=0.243 Sum_probs=88.8
Q ss_pred HHHHHHHHHHhccCCCccceeeeeeeec-CeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCC
Q 040501 3 KEFLREITVLTEIRHRNIVKFYGFCTHA-RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDC 81 (228)
Q Consensus 3 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 81 (228)
.++..-+++++.+.|+|...++++-... .+..+|+|+++ .+|.+....+. ....+. + ..
T Consensus 27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~-~Sled~~~~~~-l~~~s~---------~--------~~- 86 (725)
T KOG1093|consen 27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYT-MSLEDILKTGN-LKDESL---------L--------AH- 86 (725)
T ss_pred HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhc-cchHHHHHhcc-cchhhh---------c--------cc-
Confidence 3566778899999999999999887543 45778999884 58888876543 111000 0 11
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccccCCCCCCceecccccceeCCcccccCCcccchhhhhHHHHHHHHHhCC
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~~~~g~ 161 (228)
|+.|- | .++.+| ...+.. |- ....++|||++|.++.++.-|.
T Consensus 87 --~~~~~-----~-------~~~~td----~~~t~~---------------~~-----~~~pKsdVwsl~~i~~el~L~~ 128 (725)
T KOG1093|consen 87 --GVLHL-----N-------IIYITD----HFLTKY---------------PS-----PIGPKSDVWSLGFIILELYLGI 128 (725)
T ss_pred --cccee-----h-------hhhccc----cccccC---------------CC-----CCCcchhhhhHHHHHHHHHHhh
Confidence 22221 1 222223 000000 00 0113999999999999999888
Q ss_pred CCccccccccCCCchhhhhhhcCCCCC--CCc---hhhhhhHHHHHHHHHHhhccCCCCCCCHHHHH
Q 040501 162 HPRDFLSNVSSSNPNILVNEMLDPRLP--PLS---VDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223 (228)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il 223 (228)
..++...... ....+......... ... .-.......+.++..+|+-..|..||...+..
T Consensus 129 ~l~~~~~~s~---~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~ 192 (725)
T KOG1093|consen 129 SLEAELTESE---YLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELS 192 (725)
T ss_pred HHHHHHHHHH---HHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHHh
Confidence 7765322111 11111111111110 000 01123344567889999999999999766554
No 478
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.87 E-value=0.0039 Score=48.93 Aligned_cols=30 Identities=27% Similarity=0.396 Sum_probs=26.0
Q ss_pred CeeecCCCCCceEEcC-CCceEEeecccccc
Q 040501 84 PIVHRDISSKNVLLDL-EYEAHVSDFGIAKF 113 (228)
Q Consensus 84 ~i~h~di~p~nil~~~-~~~~~l~df~~~~~ 113 (228)
-.+|+|+.+.||++++ ++.++++||..+..
T Consensus 183 v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred EEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 3799999999999975 47899999998865
No 479
>PTZ00384 choline kinase; Provisional
Probab=96.72 E-value=0.009 Score=47.81 Aligned_cols=29 Identities=28% Similarity=0.235 Sum_probs=24.7
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
..+|+|+.+.||+.+. +.+.++||..+..
T Consensus 228 VfCHNDL~~gNIL~~~-~~l~lID~EYA~~ 256 (383)
T PTZ00384 228 LFCHNDLFFTNILDFN-QGIYFIDFDFAGF 256 (383)
T ss_pred eeeeccCCcccEEecC-CCEEEEEeccccC
Confidence 6799999999998764 4699999998764
No 480
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=96.64 E-value=0.013 Score=46.30 Aligned_cols=103 Identities=17% Similarity=0.202 Sum_probs=71.4
Q ss_pred HHHHHHHHhccCCCccceeeeeeeecCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCC
Q 040501 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPP 84 (228)
Q Consensus 5 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~ 84 (228)
...|+.-|++++..+|+-.--+.. ..-.+||+++..... -......-.++...+..+-.+++.-+.-|-+.| +
T Consensus 213 AEKE~RNLkRl~~aGIP~PePIlL--k~hVLVM~FlGrdgw---~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~ 285 (520)
T KOG2270|consen 213 AEKEMRNLKRLNNAGIPCPEPILL--KNHVLVMEFLGRDGW---AAPKLKDASLSTSKARELYQQCVRIMRRLYQKC--R 285 (520)
T ss_pred HHHHHHHHHHHHhcCCCCCCceee--ecceEeeeeccCCCC---cCcccccccCChHHHHHHHHHHHHHHHHHHHHh--c
Confidence 357888888887766542222222 233589999964332 222222333666677778888888888888876 9
Q ss_pred eeecCCCCCceEEcCCCceEEeecccccccC
Q 040501 85 IVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115 (228)
Q Consensus 85 i~h~di~p~nil~~~~~~~~l~df~~~~~~~ 115 (228)
+||.||+--|+++- +|.+.++|-+.+....
T Consensus 286 LVHADLSEfN~Lyh-dG~lyiIDVSQSVE~D 315 (520)
T KOG2270|consen 286 LVHADLSEFNLLYH-DGKLYIIDVSQSVEHD 315 (520)
T ss_pred eeccchhhhhheEE-CCEEEEEEccccccCC
Confidence 99999999999996 4689999999876543
No 481
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=96.46 E-value=0.019 Score=45.23 Aligned_cols=75 Identities=19% Similarity=0.324 Sum_probs=56.4
Q ss_pred cCeEEEEEEeecCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecc
Q 040501 30 ARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFG 109 (228)
Q Consensus 30 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~ 109 (228)
+...|++|++- |+++... +....+++..++.+.+..+.-+...= ..-||++...||+++ +|.+-|+||.
T Consensus 298 ~~y~yl~~kdh-gt~is~i-------k~~~~~e~lsff~s~~sil~~lekkf--~fehrnlt~~niLId-~GnvtLIDfk 366 (488)
T COG5072 298 TLYLYLHFKDH-GTPISII-------KADRSEEELSFFWSCISILDILEKKF--PFEHRNLTLDNILID-EGNVTLIDFK 366 (488)
T ss_pred ceEEEEEEecC-Cceeeee-------ecccHHHHHHHHHHHHHHHhhhhhcC--Ccccccccccceeee-cCceEEEEee
Confidence 34556677644 3444321 22567888899999888888887752 678999999999999 8999999999
Q ss_pred cccccC
Q 040501 110 IAKFIQ 115 (228)
Q Consensus 110 ~~~~~~ 115 (228)
+++...
T Consensus 367 lsRl~~ 372 (488)
T COG5072 367 LSRLSY 372 (488)
T ss_pred eeeccc
Confidence 998544
No 482
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=96.45 E-value=0.0058 Score=45.37 Aligned_cols=30 Identities=20% Similarity=0.388 Sum_probs=26.7
Q ss_pred CeeecCCCCCceEEcC-CCceEEeecccccc
Q 040501 84 PIVHRDISSKNVLLDL-EYEAHVSDFGIAKF 113 (228)
Q Consensus 84 ~i~h~di~p~nil~~~-~~~~~l~df~~~~~ 113 (228)
+++|+|+.+.||+++. ++.+.++||..+..
T Consensus 171 ~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 171 VFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred EEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 7999999999999998 57899999987753
No 483
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.28 E-value=0.013 Score=45.29 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=27.6
Q ss_pred CCCeeecCCCCCceEEcCC----CceEEeecccccc
Q 040501 82 IPPIVHRDISSKNVLLDLE----YEAHVSDFGIAKF 113 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~----~~~~l~df~~~~~ 113 (228)
+.+++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 3478999999999999985 8899999998754
No 484
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.27 E-value=0.032 Score=42.86 Aligned_cols=41 Identities=24% Similarity=0.345 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhccC---CCccceeeeeeeecCeEEEEEEeecCC
Q 040501 3 KEFLREITVLTEIR---HRNIVKFYGFCTHARHSFLVYEYLENG 43 (228)
Q Consensus 3 ~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~ 43 (228)
..|..|++-|+.|. .-.+++++.+.......++++||++.+
T Consensus 54 ~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 54 DMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp CHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 46889999999993 456889999988777889999998765
No 485
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.20 E-value=0.0098 Score=46.18 Aligned_cols=31 Identities=32% Similarity=0.356 Sum_probs=27.3
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
.+++|+|+.+.|++++.++...++||+.+..
T Consensus 187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 187 RGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred CccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 4899999999999999888778999998753
No 486
>PRK05231 homoserine kinase; Provisional
Probab=96.09 E-value=0.0048 Score=48.13 Aligned_cols=32 Identities=25% Similarity=0.255 Sum_probs=26.9
Q ss_pred CCCeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 82 IPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 82 ~~~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
+.+++|+|+.|.||+++.+...-++||+.+..
T Consensus 186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred CcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 34899999999999999766668999997753
No 487
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=96.01 E-value=0.016 Score=44.10 Aligned_cols=47 Identities=23% Similarity=0.246 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 66 ~~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
.+..+-..+.-.+.. ..-++|+|+.|+|++.++.|.++|+||..+..
T Consensus 137 ~~~~l~~~l~~~~~~-~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~ 183 (269)
T COG0510 137 KLKELRRALEEVPKD-DLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGL 183 (269)
T ss_pred HHHHHHHHhhhcCCC-ceeeecCCCCccceEEcCCCcEEEEecccCCC
Confidence 444444444444442 01589999999999999999999999998864
No 488
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.00 E-value=0.02 Score=44.43 Aligned_cols=28 Identities=32% Similarity=0.424 Sum_probs=24.9
Q ss_pred CeeecCCCCCceEEcCCCceEEeeccccc
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAK 112 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~ 112 (228)
+++|+|+.+.||+++. +.+.++||+.+.
T Consensus 188 ~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 188 GFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred ceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 8999999999999987 678899999764
No 489
>PRK10271 thiK thiamine kinase; Provisional
Probab=95.82 E-value=0.0081 Score=42.80 Aligned_cols=29 Identities=17% Similarity=0.179 Sum_probs=25.5
Q ss_pred CeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
..+|+|+.|.|++++++| ++++||+.+..
T Consensus 78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~ 106 (188)
T PRK10271 78 APLHMDVHAGNLVHSASG-LRLIDWEYAGD 106 (188)
T ss_pred eeecCCCCCccEEEECCC-EEEEeCCcccC
Confidence 459999999999998877 88999998864
No 490
>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]
Probab=95.79 E-value=0.033 Score=42.51 Aligned_cols=29 Identities=24% Similarity=0.430 Sum_probs=24.9
Q ss_pred eeecCCCCCceEEcCC-CceEEeecccccc
Q 040501 85 IVHRDISSKNVLLDLE-YEAHVSDFGIAKF 113 (228)
Q Consensus 85 i~h~di~p~nil~~~~-~~~~l~df~~~~~ 113 (228)
.+|+||=..||++++. +.+.++||..+..
T Consensus 250 FcHNDLL~~Niiy~~~~~~v~fIDYEYa~y 279 (391)
T KOG4720|consen 250 FCHNDLLCGNIIYDSEKGSVEFIDYEYAGY 279 (391)
T ss_pred EeecchhhcceeeccccCcEEEEeeccccc
Confidence 5899999999999765 8899999987753
No 491
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.70 E-value=0.11 Score=38.52 Aligned_cols=44 Identities=30% Similarity=0.406 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhccC---CCccceeeeeeeecCeEEEEEEeecCCChh
Q 040501 3 KEFLREITVLTEIR---HRNIVKFYGFCTHARHSFLVYEYLENGSLS 46 (228)
Q Consensus 3 ~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 46 (228)
..|..|+.-|+.+. .-.+.+++.+.....+.|+|+||++.+.+.
T Consensus 53 ~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 53 SMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred HHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence 45778888888873 357889999999999999999999876654
No 492
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.31 E-value=0.055 Score=42.39 Aligned_cols=28 Identities=36% Similarity=0.537 Sum_probs=25.2
Q ss_pred eeecCCCCCceEEcCCCc-eEEeeccccc
Q 040501 85 IVHRDISSKNVLLDLEYE-AHVSDFGIAK 112 (228)
Q Consensus 85 i~h~di~p~nil~~~~~~-~~l~df~~~~ 112 (228)
++|+|+.|.||+++.++. .-++||+.+.
T Consensus 199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred eeecCCCccceeEcCCCCeeeEEEccccc
Confidence 999999999999998875 7899999775
No 493
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.15 E-value=0.044 Score=42.64 Aligned_cols=31 Identities=26% Similarity=0.323 Sum_probs=27.9
Q ss_pred CCeeecCCCCCceEEcCCCceEEeecccccc
Q 040501 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~~~~l~df~~~~~ 113 (228)
.+++|+|+.+.|++++.++.+.++||..+..
T Consensus 196 ~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 196 TVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 3899999999999999999999999997754
No 494
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=95.14 E-value=0.036 Score=44.90 Aligned_cols=30 Identities=27% Similarity=0.371 Sum_probs=24.1
Q ss_pred eeecCCCCCceEEcCCCc-----eEEeeccccccc
Q 040501 85 IVHRDISSKNVLLDLEYE-----AHVSDFGIAKFI 114 (228)
Q Consensus 85 i~h~di~p~nil~~~~~~-----~~l~df~~~~~~ 114 (228)
++|||+..+|||++.++. ..|+||..+...
T Consensus 270 L~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G 304 (414)
T PF07914_consen 270 LVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRG 304 (414)
T ss_pred eecCCccHHheeeecCCchhHHHHHHHHHHHhhcC
Confidence 699999999999988533 358899887654
No 495
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=94.99 E-value=0.029 Score=41.17 Aligned_cols=38 Identities=18% Similarity=0.132 Sum_probs=31.0
Q ss_pred HHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecc
Q 040501 71 AHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFG 109 (228)
Q Consensus 71 ~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~ 109 (228)
+.+|.-.|+. ..+..|||-+|+|||-+..|.+||.|=+
T Consensus 151 i~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~ 188 (308)
T PF07387_consen 151 IKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPV 188 (308)
T ss_pred HHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChh
Confidence 3556667853 2389999999999999999999999865
No 496
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=94.79 E-value=0.031 Score=40.37 Aligned_cols=30 Identities=17% Similarity=0.493 Sum_probs=25.4
Q ss_pred CeeecCCCCCceEEcCCC-----ceEEeecccccc
Q 040501 84 PIVHRDISSKNVLLDLEY-----EAHVSDFGIAKF 113 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~-----~~~l~df~~~~~ 113 (228)
.++|||+.+.|+++..++ .+.++||..+..
T Consensus 121 vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~ 155 (196)
T smart00587 121 VLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHY 155 (196)
T ss_pred EEeeCCCCccceeeccCCCCCccceEEEecccCCc
Confidence 789999999999997653 588999998754
No 497
>PLN02756 S-methyl-5-thioribose kinase
Probab=94.41 E-value=0.21 Score=40.33 Aligned_cols=28 Identities=25% Similarity=0.361 Sum_probs=23.3
Q ss_pred CeeecCCCCCceEEcCCCceEEeeccccc
Q 040501 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAK 112 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~~~l~df~~~~ 112 (228)
.++|||+.+.||+++.++ .+++|-..+.
T Consensus 231 ~L~HGDl~~g~i~~~~~~-~~~id~ef~~ 258 (418)
T PLN02756 231 ALVHGDLHTGSVMVTPDS-TQVIDPEFAF 258 (418)
T ss_pred ceeecCCCCCcEEEcCCC-ceEecchhhc
Confidence 689999999999999875 7888866554
No 498
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=94.18 E-value=0.049 Score=41.65 Aligned_cols=30 Identities=27% Similarity=0.438 Sum_probs=25.3
Q ss_pred CeeecCCCCCceEEcCCCc-eEEeecccccc
Q 040501 84 PIVHRDISSKNVLLDLEYE-AHVSDFGIAKF 113 (228)
Q Consensus 84 ~i~h~di~p~nil~~~~~~-~~l~df~~~~~ 113 (228)
.++|+|++|.||+++.++. .-|+||+.+..
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 5899999999999997555 46999998764
No 499
>PRK06148 hypothetical protein; Provisional
Probab=93.78 E-value=0.18 Score=45.92 Aligned_cols=31 Identities=29% Similarity=0.500 Sum_probs=25.9
Q ss_pred CCeeecCCCCCceEEcCCC--ceE-Eeecccccc
Q 040501 83 PPIVHRDISSKNVLLDLEY--EAH-VSDFGIAKF 113 (228)
Q Consensus 83 ~~i~h~di~p~nil~~~~~--~~~-l~df~~~~~ 113 (228)
.+++|+|+++.||+++.++ .+. |+|||.+..
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 3899999999999999875 554 899997754
No 500
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=93.62 E-value=0.67 Score=33.65 Aligned_cols=84 Identities=21% Similarity=0.326 Sum_probs=56.5
Q ss_pred HHHHHHHHHhccC---CCcc--ceeeeeeeec------------------CeEEEEEEeecCCChhhhhhcCCCCCCCCH
Q 040501 4 EFLREITVLTEIR---HRNI--VKFYGFCTHA------------------RHSFLVYEYLENGSLSVILNNDTSAEELGW 60 (228)
Q Consensus 4 ~~~~E~~~l~~l~---h~~i--~~~~~~~~~~------------------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 60 (228)
-|..|-+..-+|+ +.++ ++++++..-. ....||.||..... .+..
T Consensus 100 PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~~ 167 (207)
T PF13095_consen 100 PFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQI 167 (207)
T ss_pred hHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccch
Confidence 4667777777774 4566 8888887311 12346667665432 1222
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCCeeecCCCCCceEEcCCCceEEeecccc
Q 040501 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA 111 (228)
Q Consensus 61 ~~~~~~~~~l~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df~~~ 111 (228)
.-+.++.+-+..+|.. ||+-+|+++.|.. .-+|+|||.+
T Consensus 168 ----~~~~~~~~dl~~~~k~---gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 168 ----RDIPQMLRDLKILHKL---GIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred ----hHHHHHHHHHHHHHHC---CeeeccCcccccc-----CCEEEecccC
Confidence 3456677788899999 9999999999985 2378898854
Done!