Query 040503
Match_columns 767
No_of_seqs 450 out of 3130
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 14:33:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040503.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040503hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 5E-119 2E-123 1042.0 48.0 616 115-767 1-629 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 3E-108 1E-112 955.0 48.5 600 115-767 1-606 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 7.3E-79 2.5E-83 736.1 43.4 525 133-766 7-588 (926)
4 3afg_A Subtilisin-like serine 100.0 5.7E-61 2E-65 547.4 40.7 368 26-636 34-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 6.8E-58 2.3E-62 506.0 22.4 345 27-635 2-392 (395)
6 3t41_A Epidermin leader peptid 100.0 6.5E-56 2.2E-60 502.8 28.9 337 70-636 65-466 (471)
7 2p4e_P Proprotein convertase s 100.0 2.6E-57 9E-62 518.9 7.3 338 29-601 77-422 (692)
8 1y9z_A Alkaline serine proteas 100.0 1.3E-54 4.6E-59 486.5 24.7 382 133-656 14-437 (441)
9 1r6v_A Subtilisin-like serine 100.0 1.5E-53 5.1E-58 491.4 29.6 379 25-646 29-450 (671)
10 1dbi_A AK.1 serine protease; h 100.0 1.1E-51 3.6E-56 434.9 24.1 259 133-634 21-279 (280)
11 4h6x_A Thiazoline oxidase/subt 100.0 1.2E-53 4E-58 465.4 8.6 310 133-634 21-337 (357)
12 1gci_A Subtilisin; hydrolase, 100.0 1.5E-51 5.2E-56 430.9 23.3 256 133-634 14-269 (269)
13 1r0r_E Subtilisin carlsberg; h 100.0 1E-51 3.5E-56 433.8 21.4 257 133-634 14-274 (274)
14 1to2_E Subtilisin BPN'; serine 100.0 3.8E-51 1.3E-55 430.9 21.9 259 133-635 14-276 (281)
15 1thm_A Thermitase; hydrolase(s 100.0 9.1E-51 3.1E-55 427.8 23.9 258 133-634 21-278 (279)
16 2x8j_A Intracellular subtilisi 100.0 1.9E-51 6.3E-56 442.4 17.9 265 133-635 31-311 (327)
17 2ixt_A 36KDA protease; serine 100.0 7.7E-50 2.6E-54 428.2 26.9 281 133-629 16-309 (310)
18 3zxy_A Subtilisin-like protein 100.0 6E-51 2E-55 430.7 15.2 266 139-634 3-274 (282)
19 2z30_A TK-subtilisin; thermoco 100.0 6.2E-50 2.1E-54 430.1 17.4 265 133-635 18-317 (320)
20 4h6w_A N-terminal cyanobactin 100.0 5.7E-50 2E-54 428.6 16.1 273 133-635 11-288 (306)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 1.1E-49 3.7E-54 433.7 16.7 270 133-635 33-329 (347)
22 1sh7_A Extracellular subtilisi 100.0 2.7E-48 9.1E-53 409.3 23.8 235 133-601 19-256 (284)
23 3lpc_A APRB2; protease, subtil 100.0 1.2E-48 4.2E-53 424.5 20.2 298 133-636 22-338 (340)
24 1wmd_A Protease; alpha-beta hy 100.0 4E-48 1.4E-52 433.6 22.0 294 133-636 11-319 (434)
25 2b6n_A Proteinase K; S binding 100.0 6.1E-48 2.1E-52 406.0 21.4 237 133-601 21-260 (278)
26 4dzt_A Aqualysin-1, aqualysin- 100.0 2E-47 6.8E-52 402.3 22.0 236 133-602 21-259 (276)
27 2pwa_A Proteinase K; structure 100.0 1.5E-47 5.2E-52 402.4 19.5 240 135-629 24-271 (279)
28 3lxu_X Tripeptidyl-peptidase 2 100.0 8E-47 2.8E-51 452.2 24.5 264 222-656 267-544 (1354)
29 2oxa_A Extracellular serine pr 100.0 4.3E-47 1.5E-51 441.3 21.6 300 133-640 60-430 (600)
30 1p8j_A Furin precursor; prohor 100.0 1.6E-46 5.4E-51 424.2 20.9 293 133-639 28-334 (471)
31 2id4_A Kexin; KEX2, kexin, fur 100.0 1.8E-45 6.3E-50 418.2 26.9 285 133-638 44-345 (503)
32 2qtw_B Proprotein convertase s 100.0 4.3E-46 1.5E-50 415.8 19.3 247 134-601 17-270 (546)
33 3f7m_A Alkaline serine proteas 100.0 6.3E-46 2.1E-50 391.5 19.2 230 133-601 23-260 (279)
34 3hjr_A Extracellular serine pr 100.0 2.2E-43 7.4E-48 411.9 28.1 299 133-639 60-429 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 8.6E-25 2.9E-29 248.8 11.3 98 252-357 273-384 (552)
36 1ga6_A Serine-carboxyl protein 99.9 5.3E-22 1.8E-26 215.3 11.8 100 254-357 90-207 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.0 3.5E-10 1.2E-14 127.7 8.4 98 254-356 262-374 (544)
38 2w2n_P Proprotein convertase s 99.0 6.9E-10 2.4E-14 98.9 6.6 78 26-113 36-113 (114)
39 3cnq_P Subtilisin BPN'; unclea 98.8 1.3E-08 4.4E-13 84.9 9.1 74 25-117 6-79 (80)
40 2qtw_A Proprotein convertase s 98.6 3E-08 1E-12 89.3 6.7 78 26-113 46-123 (124)
41 1v5i_B POIA1, IA-1=serine prot 98.6 1.6E-07 5.4E-12 77.1 8.4 70 28-113 3-75 (76)
42 3icu_A E3 ubiquitin-protein li 98.2 5E-06 1.7E-10 80.4 10.8 92 406-497 82-186 (194)
43 2z30_B TK-subtilisin; thermoco 97.3 0.00031 1.1E-08 55.4 5.7 45 67-112 19-63 (65)
44 2ek8_A Aminopeptidase; metallo 94.9 0.07 2.4E-06 58.5 9.6 71 415-485 108-182 (421)
45 3iib_A Peptidase M28; YP_92679 93.4 0.23 7.9E-06 54.7 9.8 80 417-496 124-225 (444)
46 2ys4_A Hydrocephalus-inducing 93.3 0.2 6.7E-06 44.5 7.5 50 692-746 41-90 (122)
47 3kas_A Transferrin receptor pr 92.1 0.18 6E-06 58.0 6.7 68 418-485 128-230 (640)
48 3fed_A Glutamate carboxypeptid 91.7 0.28 9.6E-06 57.0 7.9 69 418-486 151-268 (707)
49 3lxu_X Tripeptidyl-peptidase 2 87.1 0.26 8.7E-06 60.5 2.9 24 139-162 32-55 (1354)
50 1y9z_A Alkaline serine proteas 86.9 0.42 1.4E-05 52.6 4.3 33 502-542 179-211 (441)
51 3qbt_B Inositol polyphosphate 84.0 4.5 0.00015 36.6 9.0 54 692-746 43-100 (140)
52 2e6j_A Hydin protein; PAPD, st 83.4 1.3 4.5E-05 38.1 5.1 54 692-746 26-80 (112)
53 2r39_A FIXG-related protein; s 77.3 8.4 0.00029 33.5 8.2 52 693-746 32-83 (118)
54 3qis_A Inositol polyphosphate 61.3 25 0.00086 37.2 9.2 54 692-746 46-103 (366)
55 3idu_A Uncharacterized protein 48.6 61 0.0021 28.5 8.0 52 691-746 32-84 (127)
56 1m1s_A WR4; structural genomic 47.3 1.1E+02 0.0038 26.4 9.2 49 695-746 26-74 (116)
57 1z9l_A Vesicle-associated memb 46.8 54 0.0018 28.7 7.5 52 692-746 27-78 (128)
58 3zyz_A Beta-D-glucoside glucoh 46.3 58 0.002 37.7 9.6 54 692-746 613-673 (713)
59 1wgl_A TOLL-interacting protei 43.6 17 0.00058 27.4 3.0 34 565-598 3-36 (59)
60 1msp_A MSP, major sperm protei 42.9 57 0.0019 28.6 6.9 51 693-746 26-76 (126)
61 2kq1_A BH0266 protein; solutio 41.1 6.9 0.00024 34.2 0.6 52 695-746 56-109 (119)
62 1wic_A Hypothetical protein ri 40.8 71 0.0024 29.0 7.5 51 693-746 36-86 (152)
63 2qsv_A Uncharacterized protein 39.4 1.2E+02 0.004 29.3 9.3 52 692-746 134-185 (220)
64 1row_A SSP-19, MSP-domain prot 38.2 1.6E+02 0.0054 25.0 8.8 49 695-746 18-66 (109)
65 2x41_A Beta-glucosidase; hydro 37.5 48 0.0016 38.5 7.1 54 692-746 615-676 (721)
66 3abz_A Beta-glucosidase I; gly 37.2 97 0.0033 36.6 9.7 45 557-601 618-663 (845)
67 2qsv_A Uncharacterized protein 37.0 79 0.0027 30.5 7.6 51 692-746 19-69 (220)
68 3q48_A Chaperone CUPB2; IG fol 36.1 1.3E+02 0.0045 29.8 9.1 65 692-759 42-116 (257)
69 3isy_A Bsupi, intracellular pr 33.8 1.8E+02 0.0063 25.1 8.5 56 690-746 16-88 (120)
70 2cri_A Vesicle-associated memb 33.3 88 0.003 28.1 6.8 52 692-746 31-82 (147)
71 4ay0_A Chaperone protein CAF1M 32.6 1.4E+02 0.0049 28.7 8.6 65 692-759 26-97 (218)
72 2xg5_A PAPD, chaperone protein 28.2 2.3E+02 0.0078 27.2 9.2 66 692-759 14-88 (218)
73 1w8o_A Bacterial sialidase; 3D 27.5 1.1E+02 0.0038 34.3 7.9 62 681-746 363-425 (601)
74 1ni7_A ER75, hypothetical prot 27.5 43 0.0015 30.6 3.5 34 559-593 77-110 (155)
75 1klf_A FIMC chaperone, chapero 26.0 2.1E+02 0.0071 27.2 8.4 65 692-758 14-84 (205)
76 2co7_B SAFB chaperone, putativ 24.9 1.6E+02 0.0054 28.4 7.4 64 692-758 26-94 (221)
77 3gfu_C Chaperone protein FAEE; 24.8 2.2E+02 0.0074 27.6 8.2 65 693-759 15-85 (224)
78 4djm_A DRAB; chaperone, PILI; 24.3 2.5E+02 0.0085 27.4 8.7 65 692-759 36-105 (239)
79 3sd2_A Putative member of DUF3 23.6 2.4E+02 0.0082 23.6 7.0 55 684-746 35-89 (101)
80 3g0m_A Cysteine desulfuration 23.4 41 0.0014 30.2 2.6 33 559-592 70-102 (141)
81 1otr_A Protein CUE2; protein-p 21.0 86 0.003 22.5 3.3 24 574-597 7-30 (49)
82 1l4i_A SFAE protein; periplasm 20.3 2.6E+02 0.009 26.5 7.8 66 692-759 14-85 (206)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=4.9e-119 Score=1042.02 Aligned_cols=616 Identities=37% Similarity=0.641 Sum_probs=553.9
Q ss_pred ccCCCcccCCccCCCCCCccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCC-CCcccCCcccce
Q 040503 115 TTRSWDFLGLEKDNFIPPDSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDN-YKGVSCNKKLIG 193 (767)
Q Consensus 115 ~~~s~~~~g~~~~~~~~~~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~-~~~~~~n~ki~g 193 (767)
|+++|+|+||... ..+|..+.+|+||+|||||||||++||+|.+.+++|++.+|+|.|+.+. |+...||+|+++
T Consensus 1 Tt~s~~flgl~~~-----~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig 75 (649)
T 3i6s_A 1 TTHTSDFLKLNPS-----SGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIG 75 (649)
T ss_dssp CCSHHHHTTCCSS-----SSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEE
T ss_pred CCCChHHcCCCCc-----hhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceee
Confidence 5789999999853 5799999999999999999999999999999999999999999999988 888899999999
Q ss_pred eEEcccchhhhhccCCCCCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCC
Q 040503 194 IRYINQGTIEELRAKNPDAVIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNE 273 (767)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~ 273 (767)
.++|.++++... .+ ...+..+++|..||||||||||||+.+++.+++|++.+.++||||+|+|++||+|+..+
T Consensus 76 ~~~f~~~~~~~~--~~----~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g- 148 (649)
T 3i6s_A 76 ANYFNKGILAND--PT----VNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEG- 148 (649)
T ss_dssp EEECCHHHHHHC--TT----CCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTE-
T ss_pred eEeccCcccccc--cc----cccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCC-
Confidence 999998776542 11 23345678899999999999999999999999999999999999999999999999876
Q ss_pred CCCCChhHHHHHHHHhhhcCCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcccCCCceEEecc
Q 040503 274 NDSCASADILSAYDLAIHDGVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGSVENVAPWILTVGA 353 (767)
Q Consensus 274 ~~~~~~~~i~~aid~a~~~gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA 353 (767)
|..+++++||+||+++|+||||||||.....+..+++.+++++|+++||+||+||||+|+...+..+.+||+|+|||
T Consensus 149 ---~~~~~i~~Ai~~A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgA 225 (649)
T 3i6s_A 149 ---TFTSDLIAAMDQAVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVAS 225 (649)
T ss_dssp ---ECHHHHHHHHHHHHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEE
T ss_pred ---CCHHHHHHHHHHHHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEee
Confidence 89999999999999999999999999886677889999999999999999999999999999999999999999999
Q ss_pred ccCcceeeeeEEecCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCc--cceEEEEecCC
Q 040503 354 STTDREFTSYVTLGNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKV--QGKILICYGAR 431 (767)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~gkivl~~~g~ 431 (767)
++.+|.|...+.+++++++.|.+++.... ....+|++|.. ....|.+..++..++ +|||++|.|+.
T Consensus 226 st~dr~f~~~~~lgng~~~~g~sl~~~~~--~~~~~plv~~~----------~~~~C~~~~l~~~~vdl~GkIvlc~~g~ 293 (649)
T 3i6s_A 226 GHTDRTFAGTLTLGNGLKIRGWSLFPARA--FVRDSPVIYNK----------TLSDCSSEELLSQVENPENTIVICDDNG 293 (649)
T ss_dssp EECSCEEEEEEEETTSCEEEEECCCSSCB--CEEEEEEECCT----------TTTTCCCHHHHTTSSSGGGCEEEECCCS
T ss_pred eecccceeeEEEeCCCcEEeeeecccCcc--cCcceeeEecc----------cccccccccccccccccCCcEEEEeCCC
Confidence 99999999999999999999999987553 25678998765 356899988888877 99999999998
Q ss_pred -chhHHHHHHHHcCceEEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCcee
Q 040503 432 -YGDEKGQWAAQAGAVGMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMA 510 (767)
Q Consensus 432 -~~~~~~~~~~~~G~~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a 510 (767)
.+.+|..+++++|+.|+|++++. .....+.+.+|.++|+..+|+.|++|++++.+++++|.+..++.+..+.+.++
T Consensus 294 ~~~~~k~~~~~~~Ga~g~i~~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va 370 (649)
T 3i6s_A 294 DFSDQMRIITRARLKAAIFISEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVA 370 (649)
T ss_dssp CHHHHHHHHHHHTCSEEEEECCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEEC
T ss_pred ccHHHHHHHHHhcCceEEEEecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCccc
Confidence 89999999999999999999986 44566778999999999999999999999999999999999999888899999
Q ss_pred cccCCCCCCCCCCcccceEEeCCCcEEEeecCCCCCCCCCCCC-CccceeeecccccchhhHHHHHHHHHHhCCCCCHHH
Q 040503 511 FFTSRGPNMIDPAIFKPDVTAPGVDIIAAFTEASGPSPDETHK-RRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAA 589 (767)
Q Consensus 511 ~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ 589 (767)
.||||||+...++++||||+|||++|+++|+..........+. +...|..+||||||||||||+||||||+||+|+|++
T Consensus 371 ~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~ 450 (649)
T 3i6s_A 371 ASSARGPSRSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSA 450 (649)
T ss_dssp TTSCCSSCTTCTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHH
T ss_pred ccCCCCCCCCCCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHH
Confidence 9999999997789999999999999999998865433322222 346899999999999999999999999999999999
Q ss_pred HHHHHHhccccccCCCCcccCCCCCCCCCCCccCCCccCccCcCCCCccccCCcchhhhhhccCCCCccceecccCCCcc
Q 040503 590 IKSAIMTTARAEDSSNRPILDQNTGEKATPFAYGAGHVNPNSALDPGLVYDLTFEDYLGYICDRGYNQSTIDLFTAPKKF 669 (767)
Q Consensus 590 ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~glv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (767)
||++||+||+++++.+.|+.+.....+++++.||+|+||+.+|++||||||++.+||++|||++||+..+|+.|++ .++
T Consensus 451 IksaLmtTA~~~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~-~~~ 529 (649)
T 3i6s_A 451 IRSAMMTTADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIAR-SSA 529 (649)
T ss_dssp HHHHHHHTCBCBCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHT-TTS
T ss_pred HHHHHhcccccccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeec-CCC
Confidence 9999999999999999999886567788999999999999999999999999999999999999999999999999 677
Q ss_pred c--cCCCCCCCCCCCCeEEeec-CCce-----EEEEEEEEecCCCCceEEEEEecCCCceEEEEcCEEEEeeCCcEEEEE
Q 040503 670 T--CPKSFNLADFNYPSIAVPK-LNGT-----ITFTRKVKNVGAANSTYKARTSEITGVSTIVEPSILNFTKYGEEKTFK 741 (767)
Q Consensus 670 ~--~~~~~~~~~ln~ps~~~~~-~~~~-----~t~~rtvtnv~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~~~~~~~~ 741 (767)
. |+. ...+||||||++.. +.+. ++|+|||||||...++|++++++|.|++|+|+|.+|+|++.+|+++|+
T Consensus 530 ~~~C~~--~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~ 607 (649)
T 3i6s_A 530 SHNCSN--PSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYT 607 (649)
T ss_dssp CC-CCC--CCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEE
T ss_pred cCCCCC--chhhcCCCcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEE
Confidence 7 986 57799999999987 4555 999999999999899999999999999999999999999899999999
Q ss_pred EEEEEccCCCCCceeeeeeeEEEEcC
Q 040503 742 VAFSVKGDDKPTDYGFWRIGLVRWFS 767 (767)
Q Consensus 742 v~~~~~~~~~~~~~~~~~~~~~~w~~ 767 (767)
|||+. .......|.| |.|+|.+
T Consensus 608 v~~~~-~~~~~~~~~f---g~l~w~~ 629 (649)
T 3i6s_A 608 LTIRY-IGDEGQSRNV---GSITWVE 629 (649)
T ss_dssp EEEEE-CCC---CCCE---EEEEEEE
T ss_pred EEEEe-cccCCCceEE---EEEEEEc
Confidence 99998 4344556666 9999963
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=3.3e-108 Score=954.98 Aligned_cols=600 Identities=38% Similarity=0.701 Sum_probs=503.9
Q ss_pred ccCCCcccCCccCCCCCCccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCccccee
Q 040503 115 TTRSWDFLGLEKDNFIPPDSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGI 194 (767)
Q Consensus 115 ~~~s~~~~g~~~~~~~~~~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~ 194 (767)
|+++|+|+||+ ..+|....+|+||+|||||||||++||+|+|++++|++.+|+|.|+.+. .+.||+|++|+
T Consensus 1 tt~s~~flGl~-------~~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~--~~~~n~k~ig~ 71 (621)
T 3vta_A 1 TTRSWDFLGFP-------LTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSN--NFRCNRKIIGA 71 (621)
T ss_dssp CCSHHHHTTCC-------TTCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSS--SCCCCSSEEEE
T ss_pred CCCChhHcCCC-------ccccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCC--CcccCcceeee
Confidence 58999999998 4688888999999999999999999999999999999999999999887 55799999999
Q ss_pred EEcccchhhhhccCCCCCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCC
Q 040503 195 RYINQGTIEELRAKNPDAVIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNEN 274 (767)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~ 274 (767)
++|..+.... ..+..+++|++||||||||||||+.+.+.+.+|++.+.++||||+|+|++||+|++.+
T Consensus 72 ~~~~~~~~~~----------~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-- 139 (621)
T 3vta_A 72 RSYHIGRPIS----------PGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDG-- 139 (621)
T ss_dssp EECCCSSSCC----------TTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTE--
T ss_pred eecccCCccC----------CCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCC--
Confidence 9998764432 2335678999999999999999999888888898889999999999999999999887
Q ss_pred CCCChhHHHHHHHHhhhcCCcEEEeccCCCC-ccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcccCCCceEEecc
Q 040503 275 DSCASADILSAYDLAIHDGVDVISASLGSIA-REHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGSVENVAPWILTVGA 353 (767)
Q Consensus 275 ~~~~~~~i~~aid~a~~~gvdVIn~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA 353 (767)
|..+++++||++|+++|+||||||||+.. ..+..+++++++++|+++||+||+||||+|+...++.+.+||+++|++
T Consensus 140 --~~~~di~~a~~~a~~~g~dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~a 217 (621)
T 3vta_A 140 --CSDTDILAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAA 217 (621)
T ss_dssp --ECHHHHHHHHHHHHHHTCSEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEE
T ss_pred --CCHHHHHHHHHHHHHhCCCEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEE
Confidence 88999999999999999999999999873 456778999999999999999999999999999999999999999999
Q ss_pred ccCcceeeeeEEecCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCch
Q 040503 354 STTDREFTSYVTLGNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYG 433 (767)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~ 433 (767)
++.++.+...+.++++..+.+.++.... ...+++++..+.............|.+..+++.+++|||++|.++.
T Consensus 218 st~d~~~~~~~~~~~~~~~~~~s~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~-- 291 (621)
T 3vta_A 218 STMDRKFVTQVQIGNGQSFQGVSINTFD----NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASF-- 291 (621)
T ss_dssp ECCSEEEEEEEEETTSCEEEEBCCCCSC----CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSCC--
T ss_pred eeccccceeeEEeccCceeeeeecccCC----CcccccccccccccccccccccccccccccccccccceEEEEecCC--
Confidence 9999999999999999999998887533 4567777776665555555667889999999999999999998764
Q ss_pred hHHHHHHHHcCceEEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceeccc
Q 040503 434 DEKGQWAAQAGAVGMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFT 513 (767)
Q Consensus 434 ~~~~~~~~~~G~~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fS 513 (767)
..+.......|+.++|++++... ..+.+.+|...++..++..++.|+..+..+.+.+....+.. ....+.++.||
T Consensus 292 ~~~~~~~~~~Ga~gvi~~~~~~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~~-~~~~~~va~FS 366 (621)
T 3vta_A 292 GPHEFFKSLDGAAGVLMTSNTRD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTIL-NASAPVVVSFS 366 (621)
T ss_dssp CHHHHHHHHTTCSEEEEECSCCS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEEE-CTTCCCBCTTS
T ss_pred ChhHHhhhhcceeEEEEEecCCC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecceEec-cCCCCceeeec
Confidence 34556677889999999987543 23567899999999999999999999999999886665544 45578999999
Q ss_pred CCCCCCCCCCcccceEEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCCCHHHHHHH
Q 040503 514 SRGPNMIDPAIFKPDVTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSA 593 (767)
Q Consensus 514 s~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~ 593 (767)
||||+...++++||||+|||++|+|+++...... ...+...|..+||||||||||||++|||||+||+|+|++||++
T Consensus 367 SrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~---~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~Iksa 443 (621)
T 3vta_A 367 SRGPNRATKDVIKPDISGPGVEILAAWPSVAPVG---GIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSA 443 (621)
T ss_dssp CCCSCTTCTTSCSCCEEEECSSEEEECCSSSCBT---TBCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHH
T ss_pred CCCCCCCCCCeeccccccCCcceEeecCcccccc---CcCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHH
Confidence 9999987799999999999999999998654322 1234468999999999999999999999999999999999999
Q ss_pred HHhccccccCCCCcccCCCCCCCCCCCccCCCccCccCcCCCCccccCCcchhhhhhccCCCCccceecccCCCccccCC
Q 040503 594 IMTTARAEDSSNRPILDQNTGEKATPFAYGAGHVNPNSALDPGLVYDLTFEDYLGYICDRGYNQSTIDLFTAPKKFTCPK 673 (767)
Q Consensus 594 L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~glv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 673 (767)
||+||++++..+. +..+++||+|+||+.+|++||||||++.+||+.|||++||+.+++..+++ ....|+.
T Consensus 444 LmtTA~~~~~~~~---------~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~-~~~~~~~ 513 (621)
T 3vta_A 444 LMTTASPMNARFN---------PQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITG-DYSACTS 513 (621)
T ss_dssp HHHTCBCCCTTTC---------TTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC--------------------------
T ss_pred HHhcCCcccccCC---------CCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeec-cccccCC
Confidence 9999998865543 44678999999999999999999999999999999999999999999999 7778876
Q ss_pred CC--CCCCCCCCeEEee---cCCceEEEEEEEEecCCCCceEEEEEecCCCceEEEEcCEEEEeeCCcEEEEEEEEEEcc
Q 040503 674 SF--NLADFNYPSIAVP---KLNGTITFTRKVKNVGAANSTYKARTSEITGVSTIVEPSILNFTKYGEEKTFKVAFSVKG 748 (767)
Q Consensus 674 ~~--~~~~ln~ps~~~~---~~~~~~t~~rtvtnv~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~~~~~~~~v~~~~~~ 748 (767)
.. ...+||||||++. +...+++|+|||||||...+||++++++|+|++|+|+|.+|+|++.+|+++|+|||+. .
T Consensus 514 ~~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~-~ 592 (621)
T 3vta_A 514 GNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRG-S 592 (621)
T ss_dssp ----CGGGSCCSSEEEECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEE-C
T ss_pred CCcCcccccccccEEEEccCCCceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEe-c
Confidence 54 4679999999985 4447899999999999999999999999999999999999999989999999999987 2
Q ss_pred CCCCCceeeeeeeEEEEcC
Q 040503 749 DDKPTDYGFWRIGLVRWFS 767 (767)
Q Consensus 749 ~~~~~~~~~~~~~~~~w~~ 767 (767)
..+.|.| |.|+|.+
T Consensus 593 --~~~~~~~---g~l~w~d 606 (621)
T 3vta_A 593 --IKGFVVS---ASLVWSD 606 (621)
T ss_dssp --CCSSEEE---EEEEEEC
T ss_pred --CCCceEE---EEEEEEc
Confidence 4566666 8999974
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=7.3e-79 Score=736.08 Aligned_cols=525 Identities=25% Similarity=0.310 Sum_probs=411.7
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccC----------CC-CCcccCCcccceeEEcccch
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQN----------DN-YKGVSCNKKLIGIRYINQGT 201 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~----------~~-~~~~~~n~ki~g~~~~~~~~ 201 (767)
..+|..+.+|+||+|||||||||++||+|.+. ..|++.|.. .. ..+..||+|++++++|.++
T Consensus 7 ~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~- 79 (926)
T 1xf1_A 7 KTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKD- 79 (926)
T ss_dssp HHHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCC-
T ss_pred HHHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccccC-
Confidence 47999999999999999999999999999853 355555532 22 2345899999999998653
Q ss_pred hhhhccCCCCCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhH
Q 040503 202 IEELRAKNPDAVIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASAD 281 (767)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~ 281 (767)
..++ |..||||||||||||+.+.+.+. ++.+.||||+|+|++||+|++.+. .+..++
T Consensus 80 ----------------~~~~-D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~--~~~~~~ 136 (926)
T 1xf1_A 80 ----------------GKTA-VDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGL--ADYARN 136 (926)
T ss_dssp ----------------SCCC-CSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCH--HHHHHH
T ss_pred ----------------CCCC-CCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCC--CCcHHH
Confidence 1122 88999999999999997654332 245699999999999999987651 145678
Q ss_pred HHHHHHHhhhcCCcEEEeccCCCC--ccCcccHHHHHHHHHHhCCCEEEEecCCCCCC-------------CCCcccC--
Q 040503 282 ILSAYDLAIHDGVDVISASLGSIA--REHLKNTIAIGSFHAMMNGIVSVAAAGNSGPD-------------DGSVENV-- 344 (767)
Q Consensus 282 i~~aid~a~~~gvdVIn~SlG~~~--~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~-------------~~~~~~~-- 344 (767)
+++||+||+++|+||||||||+.. .....+.+..++++|.++||+||+||||+|+. ..+..++
T Consensus 137 i~~Ai~~Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~ 216 (926)
T 1xf1_A 137 YAQAIRDAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAA 216 (926)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTT
T ss_pred HHHHHHHHHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCccc
Confidence 999999999999999999999863 34456788899999999999999999999963 2233444
Q ss_pred CCceEEeccccCcceeeeeEEe-cCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccce
Q 040503 345 APWILTVGASTTDREFTSYVTL-GNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGK 423 (767)
Q Consensus 345 ~p~vitVgA~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gk 423 (767)
+||+|+|||++.++.+...+.+ +++....+.++.....++....+|+++... .|.+..+ .+++||
T Consensus 217 ~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~------------g~~~~~~--~~v~Gk 282 (926)
T 1xf1_A 217 ADSTLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR------------GTKEDDF--KDVKGK 282 (926)
T ss_dssp TCCSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT------------SCSTTTT--TTCTTS
T ss_pred CCceEEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC------------CCCccch--hhcCCe
Confidence 7999999999999999988887 666555555554322223367789987542 4766655 689999
Q ss_pred EEEEecCC-chhHHHHHHHHcCceEEEEeccCCCCccc-ccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceee
Q 040503 424 ILICYGAR-YGDEKGQWAAQAGAVGMILVSSKESGNKV-LNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEF 501 (767)
Q Consensus 424 ivl~~~g~-~~~~~~~~~~~~G~~g~i~~~~~~~~~~~-~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~ 501 (767)
|++|.|+. .+.+|..+++.+|+.|+|++++....... .....++|...|+..+|..|++ ....++++.......
T Consensus 283 ivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~~~~~~ 358 (926)
T 1xf1_A 283 IALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNATPKVL 358 (926)
T ss_dssp EEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECSSCEEE
T ss_pred EEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEecccceec
Confidence 99999998 89999999999999999999987543322 2345689999999999987773 445555554444345
Q ss_pred ccCCCCceecccCCCCCCCCCCcccceEEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHH--
Q 040503 502 NTRPSRMMAFFTSRGPNMIDPAIFKPDVTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVK-- 579 (767)
Q Consensus 502 ~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~-- 579 (767)
.....+.++.||||||+. ++++||||+|||++|+++++.. .|..+||||||||||||++|||+
T Consensus 359 ~~~~~~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~~-------------~y~~~SGTSMAaPhVAG~aALl~q~ 423 (926)
T 1xf1_A 359 PTASGTKLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVANN-------------KYAKLSGTSMSAPLVAGIMGLLQKQ 423 (926)
T ss_dssp ECSSCSBCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSCS-------------SSCEEESCTTHHHHHHHHHHHHHHH
T ss_pred ccCCcceeccccCCCCCC--CCccCceEECCCCCEEeeccCC-------------cceecCccchhHHHHHHHHHHHHHH
Confidence 556678999999999997 9999999999999999999763 89999999999999999999996
Q ss_pred --HhCCCCCHHH----HHHHHHhccccccCCCCcccCCCCCCCCCCCccCCCccCccCcCCCCccccCCcchhhhhhccC
Q 040503 580 --TLHPDWSPAA----IKSAIMTTARAEDSSNRPILDQNTGEKATPFAYGAGHVNPNSALDPGLVYDLTFEDYLGYICDR 653 (767)
Q Consensus 580 --q~~P~~sp~~----ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~glv~d~~~~~~~~~~~~~ 653 (767)
+.||+|+|+| ||++||+||++++..+ ....+++++||+|+||+.+|+++.+ |+|..
T Consensus 424 ~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~-------~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~ 485 (926)
T 1xf1_A 424 YETQYPDMTPSERLDLAKKVLMSSATALYDED-------EKAYFSPRQQGAGAVDAKKASAATM-----------YVTDK 485 (926)
T ss_dssp HHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGG-------GTEECCHHHHTTCBCCHHHHHHCSE-----------EEEES
T ss_pred HhccCCCCCHHHHHHHHHHHHHhcCCCcccCC-------CCccCChhccCCCccCHHHhcCCCe-----------EEEcC
Confidence 4699999997 9999999999875321 1224567899999999999999855 57876
Q ss_pred CCCccceecccCCCccccCCCCCCCCCCCCeEEeecCCceEEEEEEEEecCCC--CceEEEEEec--CCCceEEEEcCEE
Q 040503 654 GYNQSTIDLFTAPKKFTCPKSFNLADFNYPSIAVPKLNGTITFTRKVKNVGAA--NSTYKARTSE--ITGVSTIVEPSIL 729 (767)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~~~~~~t~~rtvtnv~~~--~~ty~~~~~~--p~g~~v~v~p~~~ 729 (767)
+++.. +|.+.++....+++|||||+|+. ..+|++.+.. |.+..++|.|..|
T Consensus 486 ~~~~~-------------------------~i~l~~~~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l 540 (926)
T 1xf1_A 486 DNTSS-------------------------KVHLNNVSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVL 540 (926)
T ss_dssp SSSCS-------------------------CEEEEEECSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCcc-------------------------eeeccccCccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEecccee
Confidence 64332 34445445678999999999985 4678877765 7788999988877
Q ss_pred EEeeC-------CcEEEEEEEEEEcc-------CCCCCceeeeeeeEEEEc
Q 040503 730 NFTKY-------GEEKTFKVAFSVKG-------DDKPTDYGFWRIGLVRWF 766 (767)
Q Consensus 730 ~~~~~-------~~~~~~~v~~~~~~-------~~~~~~~~~~~~~~~~w~ 766 (767)
.|... ||+++|+|||++.. ..+.+.|.| |.|+|+
T Consensus 541 ~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~---G~i~~~ 588 (926)
T 1xf1_A 541 YETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLE---GFVRFK 588 (926)
T ss_dssp EECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEE---EEEEEE
T ss_pred EeccCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcEEE---EEEEEE
Confidence 66544 99999999999821 113444555 999996
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=5.7e-61 Score=547.44 Aligned_cols=368 Identities=29% Similarity=0.430 Sum_probs=289.1
Q ss_pred CCCCEEEEeCCCCCCCCCCCCChhHHHHHHHHHHHHHhCCccccccceEEEEcceeeeEEEEcCHHHHHHh---------
Q 040503 26 AKKPYVVYLGSHSHGSNPTSDDIDRARIRHHEFLGSFLGSVEEAESSIFHSYGRFINGFGAVLEEEHAKQL--------- 96 (767)
Q Consensus 26 ~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~~~~~~~~~~~~l--------- 96 (767)
.+.+|||.|++... .+...++++.+ ..++.+.|+ .++||+++++++++++|
T Consensus 34 ~~~~~iV~~~~~~~------------~~~~~~~~~~~-------g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~ 93 (539)
T 3afg_A 34 QEVSTIIMFDNQAD------------KEKAVEILDFL-------GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYF 93 (539)
T ss_dssp CEEEEEEEESSHHH------------HHHHHHHHHHH-------TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC--
T ss_pred CceEEEEEECCCCC------------HHHHHHHHHhc-------CCeEEEEee-eeeEEEEEeCHHHHHHHHhhcccccc
Confidence 34569999997432 12222333332 257889997 79999999999999999
Q ss_pred --hCCCCeEEEEeCcccccCccCCCcccCCccC-CCCCCccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCc
Q 040503 97 --ENHPGVVSVFPDEGAKLHTTRSWDFLGLEKD-NFIPPDSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKW 173 (767)
Q Consensus 97 --~~~~~V~~v~~~~~~~~~~~~s~~~~g~~~~-~~~~~~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w 173 (767)
+++|+|++|++++.+++.... .++... .+.....+|..+.+|+||+|||||||||++||+|.++
T Consensus 94 ~~~~~~~V~~v~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~~--------- 160 (539)
T 3afg_A 94 GNAQLSGVQFIQEDYVVKVAVET----EGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQGK--------- 160 (539)
T ss_dssp -CCCCTTEEEEEECCEEECC---------------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTTT---------
T ss_pred ccccCCCeeEEEecccccccCcc----ccCCccccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhCC---------
Confidence 899999999999998775322 111110 0011257899999999999999999999999999743
Q ss_pred cccccCCCCCcccCCcccceeEEcccchhhhhccCCCCCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcc
Q 040503 174 KGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDAVIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTA 253 (767)
Q Consensus 174 ~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~ 253 (767)
+++.++|..+ ...+.|++||||||||||+|+... ..+.+
T Consensus 161 -----------------i~~~~d~~~~-----------------~~~~~D~~gHGThVAgiiag~~~~-------~~g~~ 199 (539)
T 3afg_A 161 -----------------VIGWVDFVNG-----------------KTTPYDDNGHGTHVASIAAGTGAA-------SNGKY 199 (539)
T ss_dssp -----------------EEEEEETTTC-----------------CSSCCBSSSHHHHHHHHHHCCCGG-------GTTTT
T ss_pred -----------------EeeeEECCCC-----------------CCCCCCCCCCHHHHHHHHhCcCcc-------CCCCE
Confidence 5566666543 235678899999999999987422 12346
Q ss_pred cccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhc----CCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEE
Q 040503 254 KGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHD----GVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVA 329 (767)
Q Consensus 254 ~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~----gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~ 329 (767)
.||||+|+|+.+|++++.+ .+..+++++||+||+++ |++|||||||........+.+..++.++.++|++||+
T Consensus 200 ~GvAp~A~l~~~kv~~~~g---~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~~~l~~ai~~a~~~GvlvV~ 276 (539)
T 3afg_A 200 KGMAPGAKLVGIKVLNGQG---SGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVVVV 276 (539)
T ss_dssp CCSCTTCEEEEEECSCTTS---EEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSCSHHHHHHHHHHHTTCEEEE
T ss_pred EEECCCCEEEEEEeecCCC---CcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCccchHHHHHHHHHHhcCCEEEE
Confidence 8999999999999998776 47889999999999875 8999999999875445667889999999999999999
Q ss_pred ecCCCCCCCCCc--ccCCCceEEeccccCcceeeeeEEecCceeEeeeeeeccccCCCCCceeeEecccccccccccccc
Q 040503 330 AAGNSGPDDGSV--ENVAPWILTVGASTTDREFTSYVTLGNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDA 407 (767)
Q Consensus 330 AAGN~G~~~~~~--~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~ 407 (767)
||||+|+...+. ++..+++|+|||++.
T Consensus 277 AAGN~g~~~~~~~~Pa~~~~vitVgA~~~--------------------------------------------------- 305 (539)
T 3afg_A 277 AAGNSGPNKYTVGSPAAASKVITVGAVDK--------------------------------------------------- 305 (539)
T ss_dssp ECCSCCSSSSCCCTTTTCSSSEEEEEECT---------------------------------------------------
T ss_pred ECCCCCCCCCcccCCccCCceEEEeeecC---------------------------------------------------
Confidence 999999865444 455789999998543
Q ss_pred CcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCceEEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcC
Q 040503 408 SECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAVGMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINST 487 (767)
Q Consensus 408 ~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~ 487 (767)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCceEEEecCceeeccCCCCceecccCCCCCCCCCCcccceEEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccc
Q 040503 488 QNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFKPDVTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMS 567 (767)
Q Consensus 488 ~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmA 567 (767)
.+.++.||||||+. ++++||||+|||++|+++++..... .+.....|..++|||||
T Consensus 306 ------------------~~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~----~~~~~~~y~~~sGTSmA 361 (539)
T 3afg_A 306 ------------------YDVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSM----GQPINDYYTAAPGTAMA 361 (539)
T ss_dssp ------------------TSCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCC----SEECSSSEEEECSHHHH
T ss_pred ------------------CcccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCC----CCCCcccccccCchHHH
Confidence 14678999999998 8999999999999999998653211 01112369999999999
Q ss_pred hhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCCCcccCCCCCCCCCCCccCCCccCccCcCCCC
Q 040503 568 CPHVAGIVGLVKTLHPDWSPAAIKSAIMTTARAEDSSNRPILDQNTGEKATPFAYGAGHVNPNSALDPG 636 (767)
Q Consensus 568 aP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~g 636 (767)
||||||++|||+|++|+|+|++||++|++||++++..+ .+++.||||+||+.+|++..
T Consensus 362 aP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~~-----------~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 362 TPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKPDE-----------IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp HHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGGG-----------CSBTTTBTCBCCHHHHHTGG
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCC-----------CCccCccCCccCHHHHhhhc
Confidence 99999999999999999999999999999998764221 24578999999999999854
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=6.8e-58 Score=506.00 Aligned_cols=345 Identities=27% Similarity=0.365 Sum_probs=275.9
Q ss_pred CCCEEEEeCCCCCCCCCCCCChhHHHHHHHHHHHHHhCCccccccceEEEEcceeeeEEEEcCHHHHHHhhCCCCeEEEE
Q 040503 27 KKPYVVYLGSHSHGSNPTSDDIDRARIRHHEFLGSFLGSVEEAESSIFHSYGRFINGFGAVLEEEHAKQLENHPGVVSVF 106 (767)
Q Consensus 27 ~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~~~~~~~~~~~~l~~~~~V~~v~ 106 (767)
+.+|||.||+.... .+++++ ...++.+.|. .+++|+++++++++++|+++|+|++|+
T Consensus 2 ~~~~iV~~~~~~~~---------------~~~~~~-------~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~ 58 (395)
T 2z2z_A 2 TIRVIVSVDKAKFN---------------PHEVLG-------IGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVE 58 (395)
T ss_dssp EEEEEEEECTTTCC---------------HHHHHH-------TTCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEE
T ss_pred cEEEEEEECCCccH---------------HHHHHH-------cCCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEE
Confidence 46899999986432 122322 2357889998 599999999999999999999999999
Q ss_pred eCcccccCccCCC-----------cccCCccCCCCCCccccccCCCCCc--eEEEEecccCCCCCCCccCCCCCCCCCCc
Q 040503 107 PDEGAKLHTTRSW-----------DFLGLEKDNFIPPDSAWKKARFGED--VIIANVDSGVWPESKSFADDGMGPIPSKW 173 (767)
Q Consensus 107 ~~~~~~~~~~~s~-----------~~~g~~~~~~~~~~~~~~~~~~G~g--V~VgVIDtGid~~Hp~f~~~g~~~~~~~w 173 (767)
+++.++++....+ ..|++..+ ..+.+|..+ +|+| |+|||||||||++||+|.++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i---~~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~--------- 125 (395)
T 2z2z_A 59 FDHQAVLLGKPSWLGGGSTQPAQTIPWGIERV---KAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN--------- 125 (395)
T ss_dssp ECCEEEECCEECC------CCSCCCCHHHHHT---TCGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG---------
T ss_pred EeeeecccCCCCcccccccCccccCCcchhhc---CHHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc---------
Confidence 9999876543221 22333322 125789988 9999 99999999999999999753
Q ss_pred cccccCCCCCcccCCcccceeEEcccchhhhhccCCCCCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcc
Q 040503 174 KGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDAVIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTA 253 (767)
Q Consensus 174 ~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~ 253 (767)
+...++|..+... .+..++.|..||||||||||+|.. ++ .| +
T Consensus 126 -----------------~~~~~~~~~~~~~------------~~~~~~~d~~gHGT~vAgiia~~~-n~---~g-----~ 167 (395)
T 2z2z_A 126 -----------------IAWCVSTLRGKVS------------TKLRDCADQNGHGTHVIGTIAALN-ND---IG-----V 167 (395)
T ss_dssp -----------------EEEEEECGGGCCB------------CCHHHHBCSSSHHHHHHHHHHCCC-SS---SS-----C
T ss_pred -----------------cccCccccCCccc------------CCCCCCCCCCCCHHHHHHHHHeec-CC---Cc-----e
Confidence 3344444332100 001124578999999999999973 11 22 3
Q ss_pred cccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhc--------------------CCcEEEeccCCCCccCcccHH
Q 040503 254 KGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHD--------------------GVDVISASLGSIAREHLKNTI 313 (767)
Q Consensus 254 ~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~--------------------gvdVIn~SlG~~~~~~~~~~~ 313 (767)
.||||+|+|+.+|++++.+ .+..+++++||+||+++ +++|||||||... ....+
T Consensus 168 ~GvAp~a~l~~~kv~~~~g---~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~ 241 (395)
T 2z2z_A 168 VGVAPGVQIYSVRVLDARG---SGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA---DDSYL 241 (395)
T ss_dssp CCSSTTCEEEEEECSCTTS---EEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSC---CCHHH
T ss_pred EEECCCCEEEEEEEecCCC---CccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCC---CCHHH
Confidence 8999999999999998776 47789999999999988 9999999999863 24567
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCCCcccCCCceEEeccccCcceeeeeEEecCceeEeeeeeeccccCCCCCceeeEe
Q 040503 314 AIGSFHAMMNGIVSVAAAGNSGPDDGSVENVAPWILTVGASTTDREFTSYVTLGNKMVIKGASVSQKGLLNDLDSYPLIG 393 (767)
Q Consensus 314 ~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lv~ 393 (767)
..++.++.++|++||+||||+|......++..|++|+|||++.
T Consensus 242 ~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------------------- 284 (395)
T 2z2z_A 242 YDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDS------------------------------------- 284 (395)
T ss_dssp HHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT-------------------------------------
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecC-------------------------------------
Confidence 7788889999999999999999877777778899999999643
Q ss_pred ccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCceEEEEeccCCCCcccccccccccEEEee
Q 040503 394 GADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAVGMILVSSKESGNKVLNMVHHLPTAHLN 473 (767)
Q Consensus 394 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~g~i~~~~~~~~~~~~~~~~~~p~~~i~ 473 (767)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCcccceEEeCCCcEEEeecCCCCCCCCCCCC
Q 040503 474 YTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFKPDVTAPGVDIIAAFTEASGPSPDETHK 553 (767)
Q Consensus 474 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~ 553 (767)
.+.++.||++|| +|+|||++|+++++..
T Consensus 285 --------------------------------~~~~a~fS~~G~----------~v~APG~~i~s~~~~~---------- 312 (395)
T 2z2z_A 285 --------------------------------NDNIASFSNRQP----------EVSAPGVDILSTYPDD---------- 312 (395)
T ss_dssp --------------------------------TSCBCTTSCSSC----------SEEEECSSEEEEETTT----------
T ss_pred --------------------------------CCCCCcccCCCC----------CEEeCCCCeeeecCCC----------
Confidence 246789999997 6799999999999763
Q ss_pred CccceeeecccccchhhHHHHHHHHHHhCC-------------CCCHHHHHHHHHhccccccCCCCcccCCCCCCCCCCC
Q 040503 554 RRIPYIMMSGTSMSCPHVAGIVGLVKTLHP-------------DWSPAAIKSAIMTTARAEDSSNRPILDQNTGEKATPF 620 (767)
Q Consensus 554 ~~~~y~~~sGTSmAaP~VAG~aALl~q~~P-------------~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~ 620 (767)
.|..++|||||||||||++|||+|++| .|++.+||++|++||+++... ..++
T Consensus 313 ---~y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~------------g~~~ 377 (395)
T 2z2z_A 313 ---SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPT------------GWDA 377 (395)
T ss_dssp ---EEEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSS------------SSBT
T ss_pred ---ceEecCCHHHHHHHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCC------------CCCC
Confidence 799999999999999999999999999 999999999999999876422 2357
Q ss_pred ccCCCccCccCcCCC
Q 040503 621 AYGAGHVNPNSALDP 635 (767)
Q Consensus 621 ~~G~G~vd~~~A~~~ 635 (767)
.||||+||+.+|++.
T Consensus 378 ~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 378 DYGYGVVRAALAVQA 392 (395)
T ss_dssp TTBTCBCCHHHHHHH
T ss_pred CccCceeCHHHHHHH
Confidence 899999999999864
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=6.5e-56 Score=502.76 Aligned_cols=337 Identities=19% Similarity=0.221 Sum_probs=264.2
Q ss_pred ccceEEEEcceeeeEEEEcCHHHHHHhhC-CCCeEEEEeCcccccCccCCC----------cccCCccCCCCCCcccccc
Q 040503 70 ESSIFHSYGRFINGFGAVLEEEHAKQLEN-HPGVVSVFPDEGAKLHTTRSW----------DFLGLEKDNFIPPDSAWKK 138 (767)
Q Consensus 70 ~~~i~~~y~~~~~g~~~~~~~~~~~~l~~-~~~V~~v~~~~~~~~~~~~s~----------~~~g~~~~~~~~~~~~~~~ 138 (767)
..++.+.|. .+++|+++++++++++|++ +|+|++|+++..++++..... ..|++..+... ..+|..
T Consensus 65 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~--~~~~~~ 141 (471)
T 3t41_A 65 SLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNN--GASYDD 141 (471)
T ss_dssp TCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTT--TGGGGG
T ss_pred CCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccCc--HHHHhc
Confidence 356778886 5999999999999999999 999999999998887644321 12333333211 378999
Q ss_pred CCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCCCCCCCC
Q 040503 139 ARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDAVIPQNL 218 (767)
Q Consensus 139 ~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (767)
+.+|+||+|||||||||++||+|.++- |. +.+.|..+....... .+...+.
T Consensus 142 ~~~G~gv~VaViDtGid~~Hp~~~~~~-------~~------------------~~~~~~~~~~~~~~~----~~~~~~~ 192 (471)
T 3t41_A 142 LPKHANTKIAIIDTGVMKNHDDLKNNF-------ST------------------DSKNLVPLNGFRGTE----PEETGDV 192 (471)
T ss_dssp CCSSCCCCEEEEESCCCTTCTTTTTTB-------CT------------------TCEECCCTTCGGGCC----TTCCCCT
T ss_pred cCCCCCcEEEEEeCCCCCCChhHhcCc-------cc------------------CCcccccCCCccCCC----cccCCCC
Confidence 999999999999999999999998641 11 111222111000000 0011223
Q ss_pred CCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhcCCcEEE
Q 040503 219 TTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHDGVDVIS 298 (767)
Q Consensus 219 ~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~gvdVIn 298 (767)
..+.|..||||||||||+|+. .+.||||+|+|+.+|++++.. +..+++++||+||+++|++|||
T Consensus 193 ~~~~d~~gHGT~vAgiiaa~g------------~~~GvAp~a~l~~~kv~~~~~----~~~~~i~~ai~~a~~~g~~Vin 256 (471)
T 3t41_A 193 HDVNDRKGHGTMVSGQTSANG------------KLIGVAPNNKFTMYRVFGSKK----TELLWVSKAIVQAANDGNQVIN 256 (471)
T ss_dssp TCCCCSSSHHHHHHHHHHCBS------------SSBCSSTTSCEEEEECCSSSC----CCHHHHHHHHHHHHHTTCSEEE
T ss_pred CCCcCCCCccchhhheeecCC------------ceeEECCCCeEEEEEeccCCC----CcHHHHHHHHHHHHhCCCCEEE
Confidence 467789999999999999863 248999999999999998754 8899999999999999999999
Q ss_pred eccCCCCc-------------cCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCC------------------cccCCCc
Q 040503 299 ASLGSIAR-------------EHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGS------------------VENVAPW 347 (767)
Q Consensus 299 ~SlG~~~~-------------~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~------------------~~~~~p~ 347 (767)
||||.... ....+.+..++..+.++|++||+||||+|..... .++..|+
T Consensus 257 ~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~ 336 (471)
T 3t41_A 257 ISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDN 336 (471)
T ss_dssp ECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTT
T ss_pred eCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCC
Confidence 99997411 1234667888888999999999999999976543 4456789
Q ss_pred eEEeccccCcceeeeeEEecCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEE
Q 040503 348 ILTVGASTTDREFTSYVTLGNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILIC 427 (767)
Q Consensus 348 vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~ 427 (767)
+|+|||++.
T Consensus 337 vitVgA~~~----------------------------------------------------------------------- 345 (471)
T 3t41_A 337 VVTVGSTDQ----------------------------------------------------------------------- 345 (471)
T ss_dssp EEEEEEECT-----------------------------------------------------------------------
T ss_pred eEEEEeeCC-----------------------------------------------------------------------
Confidence 999998643
Q ss_pred ecCCchhHHHHHHHHcCceEEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCC
Q 040503 428 YGARYGDEKGQWAAQAGAVGMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSR 507 (767)
Q Consensus 428 ~~g~~~~~~~~~~~~~G~~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~ 507 (767)
.+
T Consensus 346 ------------------------------------------------------------------------------~~ 347 (471)
T 3t41_A 346 ------------------------------------------------------------------------------KS 347 (471)
T ss_dssp ------------------------------------------------------------------------------TS
T ss_pred ------------------------------------------------------------------------------CC
Confidence 24
Q ss_pred ceecccCCCCCCCCCCcccceEEeCCCc----------------------EEEeecCCCCCCCCCCCCCccceeeecccc
Q 040503 508 MMAFFTSRGPNMIDPAIFKPDVTAPGVD----------------------IIAAFTEASGPSPDETHKRRIPYIMMSGTS 565 (767)
Q Consensus 508 ~~a~fSs~Gp~~~~~~~~KPDI~APG~~----------------------I~sa~~~~~~~~~~~~~~~~~~y~~~sGTS 565 (767)
.++.||++||+. |||+|||++ |+++++.. .|..++|||
T Consensus 348 ~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~~-------------~~~~~sGTS 407 (471)
T 3t41_A 348 NLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANNG-------------RYIYQAGTA 407 (471)
T ss_dssp SBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTTS-------------SEEEECSHH
T ss_pred CCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCCCC-------------CEEeecchH
Confidence 688999999963 499999987 88888763 799999999
Q ss_pred cchhhHHHHHHHHHHhCC-CCCHHHHHHHHHhccccccCCCCcccCCCCCCCCCCCccCCCccCccCcCCCC
Q 040503 566 MSCPHVAGIVGLVKTLHP-DWSPAAIKSAIMTTARAEDSSNRPILDQNTGEKATPFAYGAGHVNPNSALDPG 636 (767)
Q Consensus 566 mAaP~VAG~aALl~q~~P-~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~g 636 (767)
||||||||++|||+|++| .++|++||++|++||++... .++..||||+||+.+|++..
T Consensus 408 ~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~-------------~~~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 408 LATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN-------------KPFSRYGHGELDVYKALNVA 466 (471)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC-------------CCHHHHTTCBBCHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC-------------CCcCccccChhCHHHHHHHH
Confidence 999999999999999999 89999999999999986532 34578999999999999853
No 7
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=2.6e-57 Score=518.89 Aligned_cols=338 Identities=20% Similarity=0.231 Sum_probs=57.4
Q ss_pred CEEEEeCCCCCCCCCCCCChhHHHHHHHHHHHHHhCCccccccceEEEEcceeeeEEEEcCHHHHHHhhCCCCeEEEEeC
Q 040503 29 PYVVYLGSHSHGSNPTSDDIDRARIRHHEFLGSFLGSVEEAESSIFHSYGRFINGFGAVLEEEHAKQLENHPGVVSVFPD 108 (767)
Q Consensus 29 ~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~~~~~~~~~~~~l~~~~~V~~v~~~ 108 (767)
+|||+||+.... ...+.+.+++...... .....++.+.|++.|+||+++++++++++|+++|+|++|+++
T Consensus 77 ~YIV~lk~~~~~---------~~~~~~~~~l~a~~~~-~g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd 146 (692)
T 2p4e_P 77 TYVVVLKEETHL---------SQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEED 146 (692)
T ss_dssp EEEEEECTTCCH---------HHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEE
T ss_pred cEEEEECCCCCH---------HHHHHHHHHHHHHHhh-cccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEec
Confidence 799999997652 3333444444433221 112357899999999999999999999999999999999999
Q ss_pred cccccCccCCCcccCCccCCCCC-CccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccC
Q 040503 109 EGAKLHTTRSWDFLGLEKDNFIP-PDSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSC 187 (767)
Q Consensus 109 ~~~~~~~~~s~~~~g~~~~~~~~-~~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~ 187 (767)
+.++.+ ..+ |++..+.+.. ....|..+.+|+||+|||||||||++||+|.++.. |.
T Consensus 147 ~~v~~~-~~p---WgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~------------- 203 (692)
T 2p4e_P 147 SSVFAQ-SIP---WNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VT------------- 203 (692)
T ss_dssp EEEEEC--------------------------------------------------------------------------
T ss_pred cccccC-CCC---cchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ec-------------
Confidence 988652 223 4454432111 12478888999999999999999999999986410 10
Q ss_pred CcccceeEEcccchhhhhccCCCCCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEe
Q 040503 188 NKKLIGIRYINQGTIEELRAKNPDAVIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKV 267 (767)
Q Consensus 188 n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv 267 (767)
+...+.+. ++ ......+.|.+||||||||||+|+. .||||+|+|+++|+
T Consensus 204 -----~~~~~~d~----dg--------~~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKV 252 (692)
T 2p4e_P 204 -----DFENVPEE----DG--------TRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRV 252 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----ccccccCC----CC--------CcccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEe
Confidence 00000000 00 0001346789999999999999874 68999999999999
Q ss_pred ecCCCCCCCCChhHHHHHHHHhhhc------CCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCc
Q 040503 268 CWKPNENDSCASADILSAYDLAIHD------GVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGSV 341 (767)
Q Consensus 268 ~~~~~~~~~~~~~~i~~aid~a~~~------gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~ 341 (767)
+++.+ .++.+++++||+|++++ |++|||||||+.. ...+..++.++.++||+||+||||+|.+....
T Consensus 253 l~~~G---~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~----s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~ 325 (692)
T 2p4e_P 253 LNCQG---KGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY----SRVLNAACQRLARAGVVLVTAAGNFRDDACLY 325 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecCCC---CCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCCC----cHHHHHHHHHHHHCCCEEEEECCCCCCCCCcc
Confidence 98876 47889999999999986 8999999999763 34566677788899999999999999765433
Q ss_pred -ccCCCceEEeccccCcceeeeeEEecCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCc
Q 040503 342 -ENVAPWILTVGASTTDREFTSYVTLGNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKV 420 (767)
Q Consensus 342 -~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 420 (767)
++..|++|+|||++.+...
T Consensus 326 sPA~~~~vItVGA~d~~~~~------------------------------------------------------------ 345 (692)
T 2p4e_P 326 SPASAPEVITVGATNAQDQP------------------------------------------------------------ 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcccCCCEEEEEEEcCCCCc------------------------------------------------------------
Confidence 5667999999997643200
Q ss_pred cceEEEEecCCchhHHHHHHHHcCceEEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCcee
Q 040503 421 QGKILICYGARYGDEKGQWAAQAGAVGMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTE 500 (767)
Q Consensus 421 ~gkivl~~~g~~~~~~~~~~~~~G~~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~ 500 (767)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccCCCCceecccCCCCCCCCCCcccceEEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHH
Q 040503 501 FNTRPSRMMAFFTSRGPNMIDPAIFKPDVTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKT 580 (767)
Q Consensus 501 ~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q 580 (767)
...-+.||++||. |||+|||++|+++++... ..|..++|||||||||||++|||+|
T Consensus 346 -----a~~ss~fSn~G~~--------vDI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAPhVAG~aALlls 401 (692)
T 2p4e_P 346 -----VTLGTLGTNFGRC--------VDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLS 401 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----cccccccCCCCCc--------eeEEecCCcEEeeccCCC-----------CceEeccchHHHHHHHHHHHHHHHH
Confidence 0001238999984 499999999999997632 2789999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHhccccc
Q 040503 581 LHPDWSPAAIKSAIMTTARAE 601 (767)
Q Consensus 581 ~~P~~sp~~ik~~L~~TA~~~ 601 (767)
++|+|+|++||++|++||.+.
T Consensus 402 ~~P~ltp~qVk~~L~~tA~~~ 422 (692)
T 2p4e_P 402 AEPELTLAELRQRLIHFSAKD 422 (692)
T ss_dssp ---------------------
T ss_pred HCCCCCHHHHHHHHHHhcccc
Confidence 999999999999999999764
No 8
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=1.3e-54 Score=486.49 Aligned_cols=382 Identities=21% Similarity=0.246 Sum_probs=274.2
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
+.+|..+ |+||+|||||||||++||+|.++ ++....+..
T Consensus 14 ~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~--------------------------~~~~~~~~~------------- 52 (441)
T 1y9z_A 14 TVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN--------------------------NVTGTNNSG------------- 52 (441)
T ss_dssp SSSCCTT--GGGCEEEEEESCCCTTSTTTTTS--------------------------EEEECCCTT-------------
T ss_pred hhhhhcC--CCCcEEEEEcCCCCCCChhHhcC--------------------------cccCcccCC-------------
Confidence 4688865 77999999999999999999753 111111110
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCC--eEEEEEeecCCCCCCCCChhHHHHHHHHhh
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKA--RVAAYKVCWKPNENDSCASADILSAYDLAI 290 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A--~l~~~kv~~~~~~~~~~~~~~i~~aid~a~ 290 (767)
..+...+.|..||||||||||+|..+. .| +.||||+| +|+.+|++++.+ .+..+++++||+||+
T Consensus 53 --~~~~~~~~d~~gHGT~vAgiia~~~~~----~g-----~~GvAP~a~~~l~~~kv~~~~g---~~~~~~~~~ai~~a~ 118 (441)
T 1y9z_A 53 --TGNWYQPGNNNAHGTHVAGTIAAIANN----EG-----VVGVMPNQNANIHIVKVFNEAG---WGYSSSLVAAIDTCV 118 (441)
T ss_dssp --SCCTTCCCSSCCHHHHHHHHHHCCCSS----SB-----CCCSSCSSCSEEEEEECEETTE---ECCSSCHHHHHHHHH
T ss_pred --CCCCCCCCCCCCcHHHHHHHHhcccCC----CC-----ceEecCCCCCEEEEEEEeCCCC---CcCHHHHHHHHHHHH
Confidence 001234668899999999999997521 23 48999995 999999998776 478889999999999
Q ss_pred hc-CCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcccCCCceEEeccccCcceeeeeEEecC-
Q 040503 291 HD-GVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGSVENVAPWILTVGASTTDREFTSYVTLGN- 368 (767)
Q Consensus 291 ~~-gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~- 368 (767)
++ |++|||||||... ....+..++.++.++|++||+||||+|+....+++..+++|+|||++.+.....+...+.
T Consensus 119 ~~~g~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~ 195 (441)
T 1y9z_A 119 NSGGANVVTMSLGGSG---STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQ 195 (441)
T ss_dssp HTTCCSEEEECCCBSC---CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTT
T ss_pred HhcCCcEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCc
Confidence 99 9999999999873 234567788889999999999999999877777778899999999988764332222221
Q ss_pred ------------------ce----eEeeeeeeccccCCCCCcee--eEeccccccccccccccCcccCC--CCCCCCccc
Q 040503 369 ------------------KM----VIKGASVSQKGLLNDLDSYP--LIGGADARIANVSEIDASECKKG--SIDPAKVQG 422 (767)
Q Consensus 369 ------------------~~----~~~g~~~~~~~~~~~~~~~~--lv~~~~~~~~~~~~~~~~~c~~~--~~~~~~~~g 422 (767)
+. ++.|.+++.....+....++ +.|..... ..........|... .++..+++|
T Consensus 196 vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~-~g~~~~~~~~C~~~~~~~~~~~~~g 274 (441)
T 1y9z_A 196 VEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPI-NASATGALAECTVNGTSFSCGNMAN 274 (441)
T ss_dssp EEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCC-CCEEEEEEEEEEEETTEEECCCCTT
T ss_pred eEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCcccccccc-ccccccchhccccccccccCCCccc
Confidence 11 22233332211100000000 11111110 00011223458754 567889999
Q ss_pred eEEEEecCC------chhHHHHHHHHcCceEEEEeccCCCCcc------cccccccccEEEeehhhHHHHHHHHhcCCCc
Q 040503 423 KILICYGAR------YGDEKGQWAAQAGAVGMILVSSKESGNK------VLNMVHHLPTAHLNYTDGESVYAYINSTQNP 490 (767)
Q Consensus 423 kivl~~~g~------~~~~~~~~~~~~G~~g~i~~~~~~~~~~------~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~ 490 (767)
||++|.|+. .+..|..+++++|+.|+|++++...... .......+|.+.|+..+|+.|++|+...
T Consensus 275 kivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~--- 351 (441)
T 1y9z_A 275 KICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS--- 351 (441)
T ss_dssp EEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE---
T ss_pred cEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC---
Confidence 999999974 5778999999999999999988642111 1123457999999999999998876331
Q ss_pred eEEEecCceeeccCCCCceecccCCCCCCCCCCcccceEEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhh
Q 040503 491 TASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFKPDVTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPH 570 (767)
Q Consensus 491 ~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 570 (767)
++ + ++... ..|..+|||||||||
T Consensus 352 -~t-----------------------------------~--------~~~~~-------------~~y~~~sGTSmAaP~ 374 (441)
T 1y9z_A 352 -TT-----------------------------------V--------SNQGN-------------QDYEYYNGTSMATPH 374 (441)
T ss_dssp -EE-----------------------------------E--------EEEEE-------------ESEEEECSHHHHHHH
T ss_pred -cc-----------------------------------c--------ccccC-------------CCceeecccccCCcc
Confidence 11 1 11111 289999999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCCCcccCCCCCCCCCCCccCCCccCccCcCCCCccccCCcchhhhhh
Q 040503 571 VAGIVGLVKTLHPDWSPAAIKSAIMTTARAEDSSNRPILDQNTGEKATPFAYGAGHVNPNSALDPGLVYDLTFEDYLGYI 650 (767)
Q Consensus 571 VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~glv~d~~~~~~~~~~ 650 (767)
|||++|||+|+||+|+|++||++||+||++++..+ ++..||+|+||+.+|+ ||+.||
T Consensus 375 VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g------------~~~~~G~G~vn~~~A~-----------~~~~~l 431 (441)
T 1y9z_A 375 VSGVATLVWSYHPECSASQVRAALNATADDLSVAG------------RDNQTGYGMINAVAAK-----------AYLDES 431 (441)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS------------CBTTTBTCBCCHHHHH-----------HHHHHC
T ss_pred cchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC------------CcccccccccCHHHHH-----------HHHHhh
Confidence 99999999999999999999999999999875433 2467999999999995 699999
Q ss_pred ccCCCC
Q 040503 651 CDRGYN 656 (767)
Q Consensus 651 ~~~~~~ 656 (767)
|++++.
T Consensus 432 c~~~~~ 437 (441)
T 1y9z_A 432 CTGPTD 437 (441)
T ss_dssp TTCC--
T ss_pred hcCCCC
Confidence 998853
No 9
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=1.5e-53 Score=491.43 Aligned_cols=379 Identities=22% Similarity=0.258 Sum_probs=273.4
Q ss_pred CCCCCEEEEeCCCCCCCCCCCCChhHHHHHHHHHHHHHhCCccccccceEEEEcceeeeEEEEcCH----HHHHHhhC--
Q 040503 25 AAKKPYVVYLGSHSHGSNPTSDDIDRARIRHHEFLGSFLGSVEEAESSIFHSYGRFINGFGAVLEE----EHAKQLEN-- 98 (767)
Q Consensus 25 ~~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~~~~~~~----~~~~~l~~-- 98 (767)
..+.+|||.||+... ..++++.+ ..++.+.+. .+++++++++. +.+++|++
T Consensus 29 ~~~~~~IV~~k~~~~---------------~~~~~~~~-------g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~ 85 (671)
T 1r6v_A 29 YTEGKILVGYNDRSE---------------VDKIVKAV-------NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALA 85 (671)
T ss_dssp BCTTEEEEEESSHHH---------------HHHHHHHH-------TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSC
T ss_pred cCCccEEEEECCCcC---------------HHHHHHhc-------CCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhcc
Confidence 357899999997321 12223222 245667776 78899998864 34566764
Q ss_pred CCCeEEEEeCcccccCccC---------------------------CCcccCCccCCCCCCccc-cccCCCCCceEEEEe
Q 040503 99 HPGVVSVFPDEGAKLHTTR---------------------------SWDFLGLEKDNFIPPDSA-WKKARFGEDVIIANV 150 (767)
Q Consensus 99 ~~~V~~v~~~~~~~~~~~~---------------------------s~~~~g~~~~~~~~~~~~-~~~~~~G~gV~VgVI 150 (767)
+|+|++|||+..+++.... ....|++..+. +..+ |+. .+|+||+||||
T Consensus 86 ~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~---~~~a~w~~-~tG~gV~VAVI 161 (671)
T 1r6v_A 86 LKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIG---VTQQLWEE-ASGTNIIVAVV 161 (671)
T ss_dssp CSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTT---CCHHHHHH-CSCTTCEEEEE
T ss_pred CCCceEEecCeEEEeccccccCcccccccccccccccccccccccccccCCchhccC---Cchhhhhc-cCCCCCEEEEE
Confidence 8999999999876543100 00122332221 1355 888 89999999999
Q ss_pred cccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCCCCCCCCCCCCCCCCCchh
Q 040503 151 DSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDAVIPQNLTTGRDEEGHGTH 230 (767)
Q Consensus 151 DtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTh 230 (767)
|||||++||+|.++ . +.+...+.+... + ...+..|.+|||||
T Consensus 162 DTGVd~~HpdL~~~-------~------------------~~g~~~~~~~~~----p---------~~~d~~d~~gHGTh 203 (671)
T 1r6v_A 162 DTGVDGTHPDLEGQ-------V------------------IAGYRPAFDEEL----P---------AGTDSSYGGSAGTH 203 (671)
T ss_dssp ESCCBTTSGGGTTT-------B------------------CCEEEGGGTEEE----C---------TTCBCCTTCSHHHH
T ss_pred eCCCCCCCcccccc-------E------------------EecccccCCCcC----C---------CCCCCccCCCcchh
Confidence 99999999999864 0 111111111100 0 01234467899999
Q ss_pred hhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCC---CCCCCCChhHHHHHHHHhhhcCCcEEEeccCCCCcc
Q 040503 231 TLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKP---NENDSCASADILSAYDLAIHDGVDVISASLGSIARE 307 (767)
Q Consensus 231 VAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~---~~~~~~~~~~i~~aid~a~~~gvdVIn~SlG~~~~~ 307 (767)
|||||||.. ++ .| +.||||+|+|+++|+++.. +.......+.+++||+||+++|++|||||||+..
T Consensus 204 VAGiIAa~~-ng---~g-----v~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~-- 272 (671)
T 1r6v_A 204 VAGTIAAKK-DG---KG-----IVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG-- 272 (671)
T ss_dssp HHHHHHCCC-SS---SS-----CCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC--
T ss_pred hhhhhhccC-CC---Cc-----eEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC--
Confidence 999999974 11 22 4899999999999999761 1111345677999999999999999999999863
Q ss_pred CcccHHHHHHHHHHhCCCEEEEecCCCCCCC-CCcccCCCceEEeccccCcceeeeeEEecCceeEeeeeeeccccCCCC
Q 040503 308 HLKNTIAIGSFHAMMNGIVSVAAAGNSGPDD-GSVENVAPWILTVGASTTDREFTSYVTLGNKMVIKGASVSQKGLLNDL 386 (767)
Q Consensus 308 ~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 386 (767)
....+..++.+|.++|++||+||||+|.+. ...++..|++|+|||++.+..
T Consensus 273 -~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~--------------------------- 324 (671)
T 1r6v_A 273 -YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG--------------------------- 324 (671)
T ss_dssp -CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT---------------------------
T ss_pred -CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC---------------------------
Confidence 345678888899999999999999999764 445567899999999653210
Q ss_pred CceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCceEEEEeccCCCCccccccccc
Q 040503 387 DSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAVGMILVSSKESGNKVLNMVHH 466 (767)
Q Consensus 387 ~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~g~i~~~~~~~~~~~~~~~~~ 466 (767)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCcccceEEeCCCcEEEeecCCCCC
Q 040503 467 LPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFKPDVTAPGVDIIAAFTEASGP 546 (767)
Q Consensus 467 ~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~ 546 (767)
...++.||++||.. ||+|||++|+++++.....
T Consensus 325 ---------------------------------------~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~ 357 (671)
T 1r6v_A 325 ---------------------------------------TFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSI 357 (671)
T ss_dssp ---------------------------------------EEEECSSSCCCTTE--------EEEEECSSEEEECCCTTST
T ss_pred ---------------------------------------ceeeccccCCCCCe--------eEEecCCCEEeecCCCCcc
Confidence 02478999999987 9999999999998764211
Q ss_pred CC-----CCCCCCccceeeecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCCCcccCCCCCCCCCCCc
Q 040503 547 SP-----DETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTARAEDSSNRPILDQNTGEKATPFA 621 (767)
Q Consensus 547 ~~-----~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~ 621 (767)
.. .......+.|..++|||||||||||++|||+|++|+|+|.+||++|++||+++...| .+..
T Consensus 358 g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g------------~d~~ 425 (671)
T 1r6v_A 358 GYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG------------WDHD 425 (671)
T ss_dssp TCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS------------CBTT
T ss_pred ccccccccccccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCC------------CCCC
Confidence 00 000112347999999999999999999999999999999999999999998764322 3468
Q ss_pred cCCCccCccCcCCCCccccCCcchh
Q 040503 622 YGAGHVNPNSALDPGLVYDLTFEDY 646 (767)
Q Consensus 622 ~G~G~vd~~~A~~~glv~d~~~~~~ 646 (767)
||||+||+.+|++..|..+....+|
T Consensus 426 ~G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 426 TGYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp TBTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred cccceeCHHHHhhhhcCCCCCccce
Confidence 9999999999999888776655444
No 10
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=1.1e-51 Score=434.89 Aligned_cols=259 Identities=31% Similarity=0.362 Sum_probs=212.5
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
..+|+.+..|+||+|||||||||++||+|.++ ++..++|.++
T Consensus 21 ~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~--------------------------~~~~~~~~~~------------ 62 (280)
T 1dbi_A 21 DYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK--------------------------VIKGYDFVDN------------ 62 (280)
T ss_dssp HHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT--------------------------EEEEEETTTT------------
T ss_pred HHHHhhcCCCCCCEEEEEeCCcCCCChhhccC--------------------------cccceeccCC------------
Confidence 57999998888999999999999999999753 4444454432
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhc
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHD 292 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~ 292 (767)
...+.|..||||||||||+|...++. | +.||||+|+|+.+|+++..+ .+..+++++||+||+++
T Consensus 63 -----~~~~~d~~gHGT~vAgiia~~~~~~~---g-----~~GvAp~a~l~~~kv~~~~g---~~~~~~i~~ai~~a~~~ 126 (280)
T 1dbi_A 63 -----DYDPMDLNNHGTHVAGIAAAETNNAT---G-----IAGMAPNTRILAVRALDRNG---SGTLSDIADAIIYAADS 126 (280)
T ss_dssp -----BSCCCCSSSHHHHHHHHHHCCCSSSS---S-----CCCSSSSCEEEEEECCCTTS---CCCHHHHHHHHHHHHHT
T ss_pred -----CCCCCCCCCcHHHHHHHHhCcCCCCC---c-----ceEeCCCCEEEEEEEECCCC---CcCHHHHHHHHHHHHHC
Confidence 22456889999999999999854322 2 38999999999999998766 47889999999999999
Q ss_pred CCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcccCCCceEEeccccCcceeeeeEEecCceeE
Q 040503 293 GVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGSVENVAPWILTVGASTTDREFTSYVTLGNKMVI 372 (767)
Q Consensus 293 gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~ 372 (767)
|++|||||||... ....+..++.++.++|++||+||||+|......++..+++|+|||++.+
T Consensus 127 g~~Vin~S~G~~~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~--------------- 188 (280)
T 1dbi_A 127 GAEVINLSLGCDC---HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY--------------- 188 (280)
T ss_dssp TCSEEEECCSSCC---CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT---------------
T ss_pred CCCEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC---------------
Confidence 9999999999863 3456778888999999999999999997766667778999999996431
Q ss_pred eeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCceEEEEec
Q 040503 373 KGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAVGMILVS 452 (767)
Q Consensus 373 ~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~g~i~~~ 452 (767)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCcccceEEeC
Q 040503 453 SKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFKPDVTAP 532 (767)
Q Consensus 453 ~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~AP 532 (767)
+.++.||++||.. ||+||
T Consensus 189 ------------------------------------------------------~~~~~~S~~G~~~--------dv~Ap 206 (280)
T 1dbi_A 189 ------------------------------------------------------DRLASFSNYGTWV--------DVVAP 206 (280)
T ss_dssp ------------------------------------------------------SCBCTTBCCSTTC--------CEEEE
T ss_pred ------------------------------------------------------CCcCCCCCCCCCc--------eEEEe
Confidence 4678899999866 99999
Q ss_pred CCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCCCcccCCC
Q 040503 533 GVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTARAEDSSNRPILDQN 612 (767)
Q Consensus 533 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~g~~~~~~~ 612 (767)
|++|+++++.. .|..++|||||||||||++|||++ |.+++.+||++|++||+++..
T Consensus 207 G~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~--------- 262 (280)
T 1dbi_A 207 GVDIVSTITGN-------------RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG--------- 262 (280)
T ss_dssp CSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT---------
T ss_pred cCCeEeecCCC-------------CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC---------
Confidence 99999998763 799999999999999999999987 899999999999999987642
Q ss_pred CCCCCCCCccCCCccCccCcCC
Q 040503 613 TGEKATPFAYGAGHVNPNSALD 634 (767)
Q Consensus 613 ~~~~~~~~~~G~G~vd~~~A~~ 634 (767)
....||||+||+.+|++
T Consensus 263 -----~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 263 -----TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp -----BTTTBSSEECCHHHHHT
T ss_pred -----CCCcccCCEECHHHHhc
Confidence 12579999999999875
No 11
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=1.2e-53 Score=465.44 Aligned_cols=310 Identities=19% Similarity=0.204 Sum_probs=202.1
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
.++|..+..|++|+|||||||||++||+|++....+....|++.++.........+..+... ...++........
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--- 95 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQ--GLKGKEKEEALEA--- 95 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHH--TCCSHHHHHHHHH---
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCc--ccccccccccccc---
Confidence 47999999999999999999999999999987777777788876654330000000000000 0000000000000
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCC--CCCCChhHHHHHHHHhh
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNE--NDSCASADILSAYDLAI 290 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~--~~~~~~~~i~~aid~a~ 290 (767)
...+..++.|.+||||||||||+|+.. +.+.||||+|+|+.+|++..... ...+...+++++|+||+
T Consensus 96 -~~~~~~~~~D~~gHGThVAGiiag~~~----------~g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~ 164 (357)
T 4h6x_A 96 -VIPDTKDRIVLNDHACHVTSTIVGQEH----------SPVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLAL 164 (357)
T ss_dssp -HCTTTHHHHHHHHHHHHHHHHHHCCTT----------SSCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHH
T ss_pred -ccCCCCCCcCCCCcHHHHHHHHhccCC----------CCceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHH
Confidence 001123455778999999999999742 23489999999999999754321 11345667899999999
Q ss_pred hcCCcEEEeccCCCC-ccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcccCCCceEEeccccCcceeeeeEEecCc
Q 040503 291 HDGVDVISASLGSIA-REHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGSVENVAPWILTVGASTTDREFTSYVTLGNK 369 (767)
Q Consensus 291 ~~gvdVIn~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~ 369 (767)
+.|++|||||||... .....+.+..++.++.++|++||+||||+|.....+++..|++|+|||++.
T Consensus 165 ~~g~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 231 (357)
T 4h6x_A 165 ELGANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV------------- 231 (357)
T ss_dssp HTTCSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT-------------
T ss_pred HcCCCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc-------------
Confidence 999999999999863 334566788888899999999999999999877777778899999999653
Q ss_pred eeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCceEEE
Q 040503 370 MVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAVGMI 449 (767)
Q Consensus 370 ~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~g~i 449 (767)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCcccceE
Q 040503 450 LVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFKPDV 529 (767)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI 529 (767)
.+.++.|||||+.. .||||
T Consensus 232 --------------------------------------------------------~~~~~~fSn~G~~~-----~~~di 250 (357)
T 4h6x_A 232 --------------------------------------------------------DGTPCHFSNWGGNN-----TKEGI 250 (357)
T ss_dssp --------------------------------------------------------TSSBCTTCC---CT-----TTTEE
T ss_pred --------------------------------------------------------CCcccccccCCCCC-----Cccce
Confidence 25678999999754 58999
Q ss_pred EeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHH----hCCCCCHHHHHHHHHhccccccCCC
Q 040503 530 TAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKT----LHPDWSPAAIKSAIMTTARAEDSSN 605 (767)
Q Consensus 530 ~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~P~~sp~~ik~~L~~TA~~~~~~g 605 (767)
+|||++|+++++.. ..|..++|||||||||||++|||++ ++|.|+++|||++|++||++++..
T Consensus 251 ~APG~~i~s~~~~~------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~- 317 (357)
T 4h6x_A 251 LAPGEEILGAQPCT------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE- 317 (357)
T ss_dssp EEECSSEEECCTTC------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC--------
T ss_pred eecCCCeEeccCCC------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC-
Confidence 99999999998764 2677899999999999999999995 467899999999999999886422
Q ss_pred CcccCCCCCCCCCCCccCCCccCccCcCC
Q 040503 606 RPILDQNTGEKATPFAYGAGHVNPNSALD 634 (767)
Q Consensus 606 ~~~~~~~~~~~~~~~~~G~G~vd~~~A~~ 634 (767)
....+..||+|+||+.+|++
T Consensus 318 ---------~~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 318 ---------VVEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp ----------------CTTCBCCHHHHHH
T ss_pred ---------CCCCcccceeEEecHHHHHH
Confidence 12345689999999999996
No 12
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=1.5e-51 Score=430.89 Aligned_cols=256 Identities=30% Similarity=0.423 Sum_probs=217.6
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
+.+|..+++|+||+|+|||||| .+||+|+ +...+.|..+
T Consensus 14 ~~a~~~g~~G~gv~VaViDtGi-~~h~~l~----------------------------~~~~~~~~~~------------ 52 (269)
T 1gci_A 14 PAAHNRGLTGSGVKVAVLDTGI-STHPDLN----------------------------IRGGASFVPG------------ 52 (269)
T ss_dssp HHHHHTTCSCTTCEEEEEESCC-CCCTTCC----------------------------EEEEEECSTT------------
T ss_pred HHHHhcCCCCCCCEEEEECCCC-CCCHhhc----------------------------ccCCcccCCC------------
Confidence 5799999999999999999999 8999994 2223344322
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhc
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHD 292 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~ 292 (767)
...+.|..||||||||||+|..+ ...+.||||+|+|+.+|+++..+ .+..+++++||+||+++
T Consensus 53 -----~~~~~d~~gHGT~vAgiia~~~~---------~~~~~GvAp~a~l~~~~v~~~~g---~~~~~~~~~ai~~a~~~ 115 (269)
T 1gci_A 53 -----EPSTQDGNGHGTHVAGTIAALNN---------SIGVLGVAPSAELYAVKVLGASG---SGSVSSIAQGLEWAGNN 115 (269)
T ss_dssp -----CCSCSCSSSHHHHHHHHHHCCCS---------SSBCCCSSTTCEEEEEECBCTTS---CBCHHHHHHHHHHHHHT
T ss_pred -----CCCCCCCCCChHHHHHHHhcCcC---------CCCcEEeCCCCEEEEEEeECCCC---CcCHHHHHHHHHHHHHC
Confidence 12356889999999999999731 12248999999999999998766 47788999999999999
Q ss_pred CCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcccCCCceEEeccccCcceeeeeEEecCceeE
Q 040503 293 GVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGSVENVAPWILTVGASTTDREFTSYVTLGNKMVI 372 (767)
Q Consensus 293 gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~ 372 (767)
+++|||||||... ....+..++.++.++|++||+||||+|......++..+++|+|||++.+
T Consensus 116 ~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~--------------- 177 (269)
T 1gci_A 116 GMHVANLSLGSPS---PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN--------------- 177 (269)
T ss_dssp TCSEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT---------------
T ss_pred CCeEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecCC---------------
Confidence 9999999999873 2456778888899999999999999998777777778999999996431
Q ss_pred eeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCceEEEEec
Q 040503 373 KGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAVGMILVS 452 (767)
Q Consensus 373 ~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~g~i~~~ 452 (767)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T 1gci_A 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCcccceEEeC
Q 040503 453 SKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFKPDVTAP 532 (767)
Q Consensus 453 ~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~AP 532 (767)
+.++.||++||.. ||+||
T Consensus 178 ------------------------------------------------------~~~~~~S~~G~~~--------di~AP 195 (269)
T 1gci_A 178 ------------------------------------------------------NNRASFSQYGAGL--------DIVAP 195 (269)
T ss_dssp ------------------------------------------------------SCBCTTCCCSTTE--------EEEEE
T ss_pred ------------------------------------------------------CCCCCCCCCCCCc--------ceEec
Confidence 4678899999976 99999
Q ss_pred CCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCCCcccCCC
Q 040503 533 GVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTARAEDSSNRPILDQN 612 (767)
Q Consensus 533 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~g~~~~~~~ 612 (767)
|++|+++++.. .|..++|||||||||||++|||+|++|+|++.|||++|++||+++.
T Consensus 196 G~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g---------- 252 (269)
T 1gci_A 196 GVNVQSTYPGS-------------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG---------- 252 (269)
T ss_dssp CSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS----------
T ss_pred CCCeEeecCCC-------------CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC----------
Confidence 99999998763 7999999999999999999999999999999999999999998762
Q ss_pred CCCCCCCCccCCCccCccCcCC
Q 040503 613 TGEKATPFAYGAGHVNPNSALD 634 (767)
Q Consensus 613 ~~~~~~~~~~G~G~vd~~~A~~ 634 (767)
+++.||||+||+.+|++
T Consensus 253 -----~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 253 -----STNLYGSGLVNAEAATR 269 (269)
T ss_dssp -----CHHHHTTCBCCHHHHTC
T ss_pred -----CCCCcccCccCHHHHcC
Confidence 24689999999999985
No 13
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=1e-51 Score=433.83 Aligned_cols=257 Identities=29% Similarity=0.422 Sum_probs=215.6
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
+.+|..+++|+||+|+|||||||++||+|+ +...+.|..+
T Consensus 14 ~~~~~~g~~G~gv~VaViDtGid~~h~~l~----------------------------~~~g~~~~~~------------ 53 (274)
T 1r0r_E 14 DKVQAQGFKGANVKVAVLDTGIQASHPDLN----------------------------VVGGASFVAG------------ 53 (274)
T ss_dssp HHHHHHTCSCTTCEEEEEESCCCTTCTTCC----------------------------EEEEEECSTT------------
T ss_pred HHHHhcCCCCCCCEEEEEcCCCCCCCHhHc----------------------------CCCCccccCC------------
Confidence 579999999999999999999999999994 1223334322
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhc
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHD 292 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~ 292 (767)
...+.|..||||||||||+|..+ ...+.||||+|+|+.+|+++..+ .+..+++++||+||+++
T Consensus 54 -----~~~~~d~~gHGT~vAgiia~~~~---------~~g~~GvAp~a~l~~~~v~~~~g---~~~~~~i~~ai~~a~~~ 116 (274)
T 1r0r_E 54 -----EAYNTDGNGHGTHVAGTVAALDN---------TTGVLGVAPSVSLYAVKVLNSSG---SGSYSGIVSGIEWATTN 116 (274)
T ss_dssp -----CCTTCCSSSHHHHHHHHHHCCSS---------SSBCCCSSTTSEEEEEECSCTTS---EECHHHHHHHHHHHHHT
T ss_pred -----CCCCCCCCCCHHHHHHHHHccCC---------CCceEEECCCCEEEEEEEECCCC---CccHHHHHHHHHHHHHc
Confidence 11346789999999999999731 12248999999999999998766 46788999999999999
Q ss_pred CCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCC----CCcccCCCceEEeccccCcceeeeeEEecC
Q 040503 293 GVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDD----GSVENVAPWILTVGASTTDREFTSYVTLGN 368 (767)
Q Consensus 293 gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVgA~~~~~~~~~~~~~~~ 368 (767)
+++|||||||... ....+..++.++.++|++||+||||+|... ...++..|++|+|||++.
T Consensus 117 ~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~------------ 181 (274)
T 1r0r_E 117 GMDVINMSLGGAS---GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS------------ 181 (274)
T ss_dssp TCSEEEECEEBSS---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT------------
T ss_pred CCCEEEeCCCCCC---CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC------------
Confidence 9999999999873 245678888899999999999999999753 233456789999998543
Q ss_pred ceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCceEE
Q 040503 369 KMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAVGM 448 (767)
Q Consensus 369 ~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~g~ 448 (767)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCcccce
Q 040503 449 ILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFKPD 528 (767)
Q Consensus 449 i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPD 528 (767)
.+.++.||++||.. |
T Consensus 182 ---------------------------------------------------------~~~~~~~S~~G~~~--------d 196 (274)
T 1r0r_E 182 ---------------------------------------------------------NSNRASFSSVGAEL--------E 196 (274)
T ss_dssp ---------------------------------------------------------TSCBCTTCCCSTTE--------E
T ss_pred ---------------------------------------------------------CCCcCccCCCCCCc--------e
Confidence 14678899999855 9
Q ss_pred EEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCCCcc
Q 040503 529 VTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTARAEDSSNRPI 608 (767)
Q Consensus 529 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~g~~~ 608 (767)
|+|||++|+++++.. .|..++|||||||||||++|||+|++|.|++++||++|++||+++.
T Consensus 197 i~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------ 257 (274)
T 1r0r_E 197 VMAPGAGVYSTYPTN-------------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG------ 257 (274)
T ss_dssp EEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS------
T ss_pred EEeCCCCeEeecCCC-------------CEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC------
Confidence 999999999998763 7999999999999999999999999999999999999999998752
Q ss_pred cCCCCCCCCCCCccCCCccCccCcCC
Q 040503 609 LDQNTGEKATPFAYGAGHVNPNSALD 634 (767)
Q Consensus 609 ~~~~~~~~~~~~~~G~G~vd~~~A~~ 634 (767)
++..||||+||+.+|++
T Consensus 258 ---------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 258 ---------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp ---------CHHHHTTCBCCHHHHTC
T ss_pred ---------CCCCcccCccCHHHHhC
Confidence 34689999999999985
No 14
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=3.8e-51 Score=430.88 Aligned_cols=259 Identities=30% Similarity=0.414 Sum_probs=216.2
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
..+|..+++|+||+|||||||||++||+|+. ...+.|..+
T Consensus 14 ~~~~~~g~~G~gv~VaViDtGid~~h~~l~~----------------------------~~g~~~~~~------------ 53 (281)
T 1to2_E 14 PALHSQGYTGSNVKVAVIDSGIDSSHPDLKV----------------------------AGGASMVPS------------ 53 (281)
T ss_dssp HHHHHHTCSCTTCEEEEEESCCCTTCTTCCE----------------------------EEEEECCTT------------
T ss_pred HHHHhcCCCCCCCEEEEEcCCCCCCCHHHcC----------------------------cCCccccCC------------
Confidence 5799999999999999999999999999952 222333221
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhc
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHD 292 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~ 292 (767)
+.....|..||||||||||+|..+ ...+.||||+|+|+.+|+++..+ .+..++++++|+|++++
T Consensus 54 ----~~~~~~d~~gHGT~vAgiia~~~~---------~~g~~GvAp~a~l~~~kv~~~~g---~~~~~~i~~ai~~a~~~ 117 (281)
T 1to2_E 54 ----ETNPFQDNNSHGTHVAGTVAALNN---------SIGVLGVAPSASLYAVKVLGADG---SGQYSWIINGIEWAIAN 117 (281)
T ss_dssp ----CCCTTCCSSSHHHHHHHHHHCCSS---------SSSBCCSSTTSEEEEEECSCTTS---EECHHHHHHHHHHHHHT
T ss_pred ----CCCCCCCCCCcHHHHHHHHhccCC---------CCcceeeCCCCEEEEEEEeCCCC---CccHHHHHHHHHHHHHC
Confidence 011235789999999999999731 12248999999999999998766 46788999999999999
Q ss_pred CCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCC----CCcccCCCceEEeccccCcceeeeeEEecC
Q 040503 293 GVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDD----GSVENVAPWILTVGASTTDREFTSYVTLGN 368 (767)
Q Consensus 293 gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVgA~~~~~~~~~~~~~~~ 368 (767)
+++|||||||... ....+..++.++.++|++||+||||+|... ...+...|++|+|||++.
T Consensus 118 ~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~------------ 182 (281)
T 1to2_E 118 NMDVINMSLGGPS---GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS------------ 182 (281)
T ss_dssp TCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT------------
T ss_pred CCcEEEECCcCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC------------
Confidence 9999999999873 246678888899999999999999999763 234456789999998543
Q ss_pred ceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCceEE
Q 040503 369 KMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAVGM 448 (767)
Q Consensus 369 ~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~g~ 448 (767)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCcccce
Q 040503 449 ILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFKPD 528 (767)
Q Consensus 449 i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPD 528 (767)
.+.++.||++||.. |
T Consensus 183 ---------------------------------------------------------~~~~~~fS~~G~~~--------d 197 (281)
T 1to2_E 183 ---------------------------------------------------------SNQRASFSSVGPEL--------D 197 (281)
T ss_dssp ---------------------------------------------------------TSCBCTTCCCSTTC--------C
T ss_pred ---------------------------------------------------------CCCcCCcCCCCCCc--------e
Confidence 14678899999965 9
Q ss_pred EEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCCCcc
Q 040503 529 VTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTARAEDSSNRPI 608 (767)
Q Consensus 529 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~g~~~ 608 (767)
|+|||++|+++++.. .|..++|||||||||||++|||+|++|+|++++||++|++||+++.
T Consensus 198 i~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------ 258 (281)
T 1to2_E 198 VMAPGVSIQSTLPGN-------------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG------ 258 (281)
T ss_dssp EEEECSSEEEEETTT-------------EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS------
T ss_pred EEecCCCeEeecCCC-------------CEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC------
Confidence 999999999998763 7999999999999999999999999999999999999999998762
Q ss_pred cCCCCCCCCCCCccCCCccCccCcCCC
Q 040503 609 LDQNTGEKATPFAYGAGHVNPNSALDP 635 (767)
Q Consensus 609 ~~~~~~~~~~~~~~G~G~vd~~~A~~~ 635 (767)
+++.||||+||+.+|+++
T Consensus 259 ---------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 259 ---------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp ---------CHHHHTTCBCCHHHHTSS
T ss_pred ---------CCCCcccceecHHHHhhh
Confidence 346899999999999975
No 15
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=9.1e-51 Score=427.79 Aligned_cols=258 Identities=30% Similarity=0.397 Sum_probs=218.3
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
..+|+.. +|+||+|||||||||++||+|.++ ++..++|.++
T Consensus 21 ~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~~------------ 61 (279)
T 1thm_A 21 PQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK--------------------------VVGGWDFVDN------------ 61 (279)
T ss_dssp HHHHTTC-CCTTCEEEEEESCCCTTCTTTTTT--------------------------EEEEEETTTT------------
T ss_pred HHHHhcC-CCCCCEEEEEccCCCCCCcchhcC--------------------------ccccccccCC------------
Confidence 5789887 799999999999999999999753 4444455432
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhc
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHD 292 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~ 292 (767)
...+.|..||||||||||+|...++. | +.||||+|+|+.+|+++..+ .++.+++++||+||+++
T Consensus 62 -----~~~~~d~~gHGT~vAgiia~~~~n~~---g-----~~GvAp~a~l~~~~v~~~~g---~~~~~~~~~ai~~a~~~ 125 (279)
T 1thm_A 62 -----DSTPQNGNGHGTHCAGIAAAVTNNST---G-----IAGTAPKASILAVRVLDNSG---SGTWTAVANGITYAADQ 125 (279)
T ss_dssp -----BSCCCCSSSHHHHHHHHHHCCCSSSS---S-----CCCSSTTCEEEEEECSCTTS---CCCHHHHHHHHHHHHHT
T ss_pred -----CCCCCCCCCcHHHHHHHHhCccCCCC---c-----cEEeCCCCEEEEEEeeCCCC---CccHHHHHHHHHHHHHC
Confidence 22456889999999999999864332 2 38999999999999998776 47888999999999999
Q ss_pred CCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcccCCCceEEeccccCcceeeeeEEecCceeE
Q 040503 293 GVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGSVENVAPWILTVGASTTDREFTSYVTLGNKMVI 372 (767)
Q Consensus 293 gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~ 372 (767)
|++|||||||... ..+.+..++.++.++|++||+||||+|.....+++..+++|+|||++.+
T Consensus 126 g~~Vin~S~G~~~---~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~--------------- 187 (279)
T 1thm_A 126 GAKVISLSLGGTV---GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN--------------- 187 (279)
T ss_dssp TCSEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT---------------
T ss_pred CCCEEEEecCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC---------------
Confidence 9999999999873 3456788888999999999999999998777777778999999996432
Q ss_pred eeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCceEEEEec
Q 040503 373 KGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAVGMILVS 452 (767)
Q Consensus 373 ~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~g~i~~~ 452 (767)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCcccceEEeC
Q 040503 453 SKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFKPDVTAP 532 (767)
Q Consensus 453 ~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~AP 532 (767)
+.++.||++||.. ||+||
T Consensus 188 ------------------------------------------------------~~~~~fS~~G~~~--------dv~AP 205 (279)
T 1thm_A 188 ------------------------------------------------------DNKSSFSTYGSWV--------DVAAP 205 (279)
T ss_dssp ------------------------------------------------------SCBCTTCCCCTTC--------CEEEE
T ss_pred ------------------------------------------------------CCcCCcCCCCCce--------EEEEc
Confidence 4678899999876 99999
Q ss_pred CCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCCCcccCCC
Q 040503 533 GVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTARAEDSSNRPILDQN 612 (767)
Q Consensus 533 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~g~~~~~~~ 612 (767)
|++|+++++.. .|..++|||||||||||++||| ++|.+++++||++|++||+++...
T Consensus 206 G~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~-------- 262 (279)
T 1thm_A 206 GSSIYSTYPTS-------------TYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT-------- 262 (279)
T ss_dssp CSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB--------
T ss_pred CCCeEEEeCCC-------------CEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC--------
Confidence 99999998763 7999999999999999999999 589999999999999999876432
Q ss_pred CCCCCCCCccCCCccCccCcCC
Q 040503 613 TGEKATPFAYGAGHVNPNSALD 634 (767)
Q Consensus 613 ~~~~~~~~~~G~G~vd~~~A~~ 634 (767)
...||||+||+.+|++
T Consensus 263 ------~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 263 ------GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp ------TTTBSSEECCHHHHHH
T ss_pred ------CccccCCeeCHHHHhc
Confidence 1469999999999874
No 16
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=1.9e-51 Score=442.44 Aligned_cols=265 Identities=26% Similarity=0.338 Sum_probs=216.0
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
+.+|..+++|+||+|||||||||++||+|.++ +++.++|..++...
T Consensus 31 ~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~--------------------------~~~~~~~~~~~~~~-------- 76 (327)
T 2x8j_A 31 PAVWRASAKGAGQIIGVIDTGCQVDHPDLAER--------------------------IIGGVNLTTDYGGD-------- 76 (327)
T ss_dssp HHHHHHHGGGTTCEEEEEESCCCTTCTTTGGG--------------------------EEEEEECSSGGGGC--------
T ss_pred HHHHhcCCCCCCCEEEEEcCCCCCCChhHhhc--------------------------ccCCccccCCCCCC--------
Confidence 57999999999999999999999999999753 45555665543211
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhh-
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIH- 291 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~- 291 (767)
.....|..||||||||||+|.. ++ ..+.||||+|+|+.+|+++..+ .+..+++++||+||++
T Consensus 77 -----~~~~~d~~gHGT~VAgiia~~~-~~--------~g~~GvAp~a~l~~~kv~~~~g---~~~~~~i~~ai~~a~~~ 139 (327)
T 2x8j_A 77 -----ETNFSDNNGHGTHVAGTVAAAE-TG--------SGVVGVAPKADLFIIKALSGDG---SGEMGWIAKAIRYAVDW 139 (327)
T ss_dssp -----TTCCCCSSSHHHHHHHHHHCCC-CS--------SBCCCSSTTCEEEEEECSCTTS---EECHHHHHHHHHHHHHC
T ss_pred -----CCCCCCCCCchHHHHHHHhccC-CC--------CCcEeeCCCCEEEEEEeECCCC---CcCHHHHHHHHHHHHhh
Confidence 2235688999999999999984 11 2248999999999999998766 4678899999999999
Q ss_pred -----cCCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCC-----CCcccCCCceEEeccccCcceee
Q 040503 292 -----DGVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDD-----GSVENVAPWILTVGASTTDREFT 361 (767)
Q Consensus 292 -----~gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-----~~~~~~~p~vitVgA~~~~~~~~ 361 (767)
.+++|||||||... ....+..++.++.++|++||+||||+|... ...++..+++|+|||++.+
T Consensus 140 ~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~---- 212 (327)
T 2x8j_A 140 RGPKGEQMRIITMSLGGPT---DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD---- 212 (327)
T ss_dssp CCTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECTT----
T ss_pred cccccCCceEEEECCCcCC---CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCC----
Confidence 89999999999873 245677888889999999999999999652 2344567899999996532
Q ss_pred eeEEecCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHH
Q 040503 362 SYVTLGNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAA 441 (767)
Q Consensus 362 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~ 441 (767)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCceEEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCC
Q 040503 442 QAGAVGMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMID 521 (767)
Q Consensus 442 ~~G~~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~ 521 (767)
+.++.||++||.+
T Consensus 213 -----------------------------------------------------------------~~~~~fS~~G~~~-- 225 (327)
T 2x8j_A 213 -----------------------------------------------------------------LRLSDFTNTNEEI-- 225 (327)
T ss_dssp -----------------------------------------------------------------CCBSCC---CCCC--
T ss_pred -----------------------------------------------------------------CCCCCccCCCCCc--
Confidence 4678899999855
Q ss_pred CCcccceEEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHh-----CCCCCHHHHHHHHHh
Q 040503 522 PAIFKPDVTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTL-----HPDWSPAAIKSAIMT 596 (767)
Q Consensus 522 ~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~P~~sp~~ik~~L~~ 596 (767)
||+|||++|+++++.. .|..++|||||||||||++|||+|+ +|.+++.+||++|++
T Consensus 226 ------di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~ 286 (327)
T 2x8j_A 226 ------DIVAPGVGIKSTYLDS-------------GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVR 286 (327)
T ss_dssp ------SEEEECSSEEEECSTT-------------CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHT
T ss_pred ------eEecCcCceEeecCCC-------------CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHH
Confidence 9999999999998753 7999999999999999999999999 999999999999999
Q ss_pred ccccccCCCCcccCCCCCCCCCCCccCCCccCccCcCCC
Q 040503 597 TARAEDSSNRPILDQNTGEKATPFAYGAGHVNPNSALDP 635 (767)
Q Consensus 597 TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 635 (767)
||+++. .++..+|||+||+.+|++.
T Consensus 287 tA~~~g--------------~~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 287 RATPIG--------------FTAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp TEECCS--------------SCHHHHTTCEECTTHHHHH
T ss_pred hCccCC--------------CCCCceeeeEECHHHHHHh
Confidence 998762 1356899999999999973
No 17
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=7.7e-50 Score=428.19 Aligned_cols=281 Identities=26% Similarity=0.312 Sum_probs=223.8
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
+.+|..+.+|+||+|||||||||++||+|.++ +...++|.....
T Consensus 16 ~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~--------------------------~~~~~~~~~~~~---------- 59 (310)
T 2ixt_A 16 NDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN--------------------------VEQCKDFTGATT---------- 59 (310)
T ss_dssp CTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT--------------------------EEEEEESSSSSS----------
T ss_pred hhhhhccCCCCCcEEEEEecCCCCCCHHHhhc--------------------------ccccccccCCCC----------
Confidence 57999999999999999999999999999754 344445543210
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhc
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHD 292 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~ 292 (767)
.......|..||||||||||+|.... ....+.||||+|+|+.+|++++.+ .+..++++++|+||+++
T Consensus 60 ---~~~~~~~d~~gHGT~vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~~g---~~~~~~~~~ai~~a~~~ 126 (310)
T 2ixt_A 60 ---PINNSCTDRNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDSG---SGYSDDIAAAIRHAADQ 126 (310)
T ss_dssp ---CEETCCCCSSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTTS---CCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCCCCHHHHHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcCCC---CCcHHHHHHHHHHHHHh
Confidence 01224568899999999999987521 122348999999999999998776 47889999999999999
Q ss_pred CC-----cEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCC--CCcccCCCceEEeccccCcceeeeeEE
Q 040503 293 GV-----DVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDD--GSVENVAPWILTVGASTTDREFTSYVT 365 (767)
Q Consensus 293 gv-----dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~--~~~~~~~p~vitVgA~~~~~~~~~~~~ 365 (767)
++ +|||||||... ....+..++.++.++|++||+||||+|... ...++..|++|+|||++....
T Consensus 127 ~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~------ 197 (310)
T 2ixt_A 127 ATATGTKTIISMSLGSSA---NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ------ 197 (310)
T ss_dssp HHHHTCCEEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE------
T ss_pred hhccCCCeEEEEcCCCCC---CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc------
Confidence 88 99999999873 245677888889999999999999999763 334456799999999652100
Q ss_pred ecCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCc
Q 040503 366 LGNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGA 445 (767)
Q Consensus 366 ~~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~ 445 (767)
T Consensus 198 -------------------------------------------------------------------------------- 197 (310)
T 2ixt_A 198 -------------------------------------------------------------------------------- 197 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCC--ceecccCCCCCCCC--
Q 040503 446 VGMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSR--MMAFFTSRGPNMID-- 521 (767)
Q Consensus 446 ~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSs~Gp~~~~-- 521 (767)
.+ .++.||++||....
T Consensus 198 ------------------------------------------------------------~g~~~~~~~S~~G~~~~~g~ 217 (310)
T 2ixt_A 198 ------------------------------------------------------------NGTYRVADYSSRGYISTAGD 217 (310)
T ss_dssp ------------------------------------------------------------TTEEEECTTSCCCCTTTTTS
T ss_pred ------------------------------------------------------------CCCeeeccccCCCCccCCcc
Confidence 12 57889999985321
Q ss_pred --CCcccceEEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhccc
Q 040503 522 --PAIFKPDVTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTAR 599 (767)
Q Consensus 522 --~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~ 599 (767)
..+.||||+|||++|+++++.. .|..++|||||||||||++|||+|++|.|++++||++|++||+
T Consensus 218 ~~~~~~~~di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~ 284 (310)
T 2ixt_A 218 YVIQEGDIEISAPGSSVYSTWYNG-------------GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAK 284 (310)
T ss_dssp SSCCTTCCCEEEECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHH
T ss_pred ccccCCCeeEECCCCCEeeecCCC-------------CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCc
Confidence 1235999999999999998753 7999999999999999999999999999999999999999999
Q ss_pred cccCCCCcccCCCCCCCCCCCccCCCccCc
Q 040503 600 AEDSSNRPILDQNTGEKATPFAYGAGHVNP 629 (767)
Q Consensus 600 ~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~ 629 (767)
+.+..+. .......+..+|||++|+
T Consensus 285 ~~~~~~~-----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 285 SVDIKGG-----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp TSCCCBS-----TTCCSSSBTTTBTCBCCC
T ss_pred ccCCCCC-----cccccCCccccccceeec
Confidence 8754321 233456678999999986
No 18
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=6e-51 Score=430.68 Aligned_cols=266 Identities=21% Similarity=0.235 Sum_probs=210.4
Q ss_pred CCCC-CceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCCCCCCC
Q 040503 139 ARFG-EDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDAVIPQN 217 (767)
Q Consensus 139 ~~~G-~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~ 217 (767)
..+| +||+|||||||||++||+|.++ .+....+... ..
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~---------------~~ 41 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA--------------------------DLTVLPTLAP---------------TA 41 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC--------------------------EEEECCCSSC---------------CC
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC--------------------------eeecCcCCCC---------------CC
Confidence 3578 6999999999999999999764 1111111110 00
Q ss_pred CCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhcCCcEE
Q 040503 218 LTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHDGVDVI 297 (767)
Q Consensus 218 ~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~gvdVI 297 (767)
.....|.+||||||||||+|+.. ..+.||||+|+|+.+|++.+.+. .....++++||+||++++++||
T Consensus 42 ~~~d~~~~gHGT~VAGiiag~~~----------~~~~GvAp~a~l~~~kv~~~~~~--~~~~~~i~~ai~~a~~~~~~Vi 109 (282)
T 3zxy_A 42 ARSDGFMSAHGTHVASIIFGQPE----------TSVPGIAPQCRGLIVPIFSDDRR--RITQLDLARGIERAVNAGAHII 109 (282)
T ss_dssp CCTTCHHHHHHHHHHHHHHCCTT----------SSSCCSSTTSEEEEEECSCSSSS--CCCHHHHHHHHHHHHHTTCSEE
T ss_pred CCCCCCCCCcccceeehhhccCC----------ceeeeeccccceEeeEeeccccc--cchHHHHHHHHHHhhccCCeEE
Confidence 11233567999999999998742 23489999999999999865442 3678889999999999999999
Q ss_pred EeccCCCC-ccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcccCCCceEEeccccCcceeeeeEEecCceeEeeee
Q 040503 298 SASLGSIA-REHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGSVENVAPWILTVGASTTDREFTSYVTLGNKMVIKGAS 376 (767)
Q Consensus 298 n~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~ 376 (767)
|||||... .......+..++..+.++|+++|+||||+|......+...|++|+|||++.+
T Consensus 110 n~S~G~~~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------- 170 (282)
T 3zxy_A 110 NISGGELTDFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH------------------- 170 (282)
T ss_dssp EECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT-------------------
T ss_pred eccCccccccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC-------------------
Confidence 99999762 2334566778888999999999999999998777777778999999996432
Q ss_pred eeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCceEEEEeccCCC
Q 040503 377 VSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAVGMILVSSKES 456 (767)
Q Consensus 377 ~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~g~i~~~~~~~ 456 (767)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCcccceEEeCCCcE
Q 040503 457 GNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFKPDVTAPGVDI 536 (767)
Q Consensus 457 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I 536 (767)
+.++.||++|+. +.||||+|||.+|
T Consensus 171 --------------------------------------------------~~~~~~S~~~~~-----~~~~di~ApG~~i 195 (282)
T 3zxy_A 171 --------------------------------------------------GHPLDFSNWGST-----YEQQGILAPGEDI 195 (282)
T ss_dssp --------------------------------------------------SCBCSSSCCCHH-----HHHHEEEEECSSE
T ss_pred --------------------------------------------------CccccccCCCCC-----ccccceeccCcce
Confidence 467889999864 4789999999999
Q ss_pred EEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhC----CCCCHHHHHHHHHhccccccCCCCcccCCC
Q 040503 537 IAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLH----PDWSPAAIKSAIMTTARAEDSSNRPILDQN 612 (767)
Q Consensus 537 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~----P~~sp~~ik~~L~~TA~~~~~~g~~~~~~~ 612 (767)
+++++.. .|..++|||||||||||++|||++++ |.++|++||++|++||++++..
T Consensus 196 ~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~-------- 254 (282)
T 3zxy_A 196 LGAKPGG-------------GTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDD-------- 254 (282)
T ss_dssp EEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC-----------
T ss_pred eeecCCC-------------ceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCC--------
Confidence 9998763 79999999999999999999999874 7899999999999999876422
Q ss_pred CCCCCCCCccCCCccCccCcCC
Q 040503 613 TGEKATPFAYGAGHVNPNSALD 634 (767)
Q Consensus 613 ~~~~~~~~~~G~G~vd~~~A~~ 634 (767)
.+.....+|+|+||+.+|++
T Consensus 255 --~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 255 --APEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp ------CGGGTTCBCCHHHHHH
T ss_pred --CCCccCceeeeEeCHHHHHH
Confidence 22345689999999999986
No 19
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=6.2e-50 Score=430.07 Aligned_cols=265 Identities=29% Similarity=0.424 Sum_probs=217.8
Q ss_pred ccccccCCCCC--ceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCC
Q 040503 133 DSAWKKARFGE--DVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNP 210 (767)
Q Consensus 133 ~~~~~~~~~G~--gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 210 (767)
+.+|+.+ +|+ ||+|||||||||++||+|.++ +.....|..+...
T Consensus 18 ~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~--------------------------~~~~~~~~~~~~~------- 63 (320)
T 2z30_A 18 PSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN--------------------------IAWCVSTLRGKVS------- 63 (320)
T ss_dssp GGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG--------------------------EEEEEECGGGCCB-------
T ss_pred HHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc--------------------------cccCccccCCccC-------
Confidence 5799988 999 999999999999999999753 3333444332100
Q ss_pred CCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhh
Q 040503 211 DAVIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAI 290 (767)
Q Consensus 211 ~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~ 290 (767)
.......|..||||||||||+|.. ++ .| +.||||+|+|+.+|+++..+ .+..++++++|+||+
T Consensus 64 -----~~~~~~~d~~gHGT~vAgiia~~~-n~---~g-----~~GvAp~a~l~~~~v~~~~g---~~~~~~i~~ai~~a~ 126 (320)
T 2z30_A 64 -----TKLRDCADQNGHGTHVIGTIAALN-ND---IG-----VVGVAPGVQIYSVRVLDARG---SGSYSDIAIGIEQAI 126 (320)
T ss_dssp -----CCHHHHBCSSSHHHHHHHHHHCCS-SS---BS-----CCCSSTTCEEEEEECSCTTS---EEEHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCCCCHHHHHHHHHccc-CC---Cc-----eEeeCCCCEEEEEEeeCCCC---CccHHHHHHHHHHHH
Confidence 001123578999999999999973 11 22 38999999999999998776 477899999999999
Q ss_pred hc--------------------CCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcccCCCceEE
Q 040503 291 HD--------------------GVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGSVENVAPWILT 350 (767)
Q Consensus 291 ~~--------------------gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vit 350 (767)
++ +++|||||||... ....+..++.++.++|++||+||||+|.....+++..|++|+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~ 203 (320)
T 2z30_A 127 LGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA---DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIA 203 (320)
T ss_dssp HTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEE
T ss_pred hCcccccccccccccccccccCCceEEEecCCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEE
Confidence 87 9999999999873 245677788889999999999999999877777778899999
Q ss_pred eccccCcceeeeeEEecCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecC
Q 040503 351 VGASTTDREFTSYVTLGNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGA 430 (767)
Q Consensus 351 VgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g 430 (767)
|||++.+
T Consensus 204 Vga~~~~------------------------------------------------------------------------- 210 (320)
T 2z30_A 204 VGAIDSN------------------------------------------------------------------------- 210 (320)
T ss_dssp EEEECTT-------------------------------------------------------------------------
T ss_pred EEeeCCC-------------------------------------------------------------------------
Confidence 9996431
Q ss_pred CchhHHHHHHHHcCceEEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCcee
Q 040503 431 RYGDEKGQWAAQAGAVGMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMA 510 (767)
Q Consensus 431 ~~~~~~~~~~~~~G~~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a 510 (767)
+.++
T Consensus 211 ----------------------------------------------------------------------------~~~~ 214 (320)
T 2z30_A 211 ----------------------------------------------------------------------------DNIA 214 (320)
T ss_dssp ----------------------------------------------------------------------------SCBC
T ss_pred ----------------------------------------------------------------------------CCcC
Confidence 4678
Q ss_pred cccCCCCCCCCCCcccceEEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhC--------
Q 040503 511 FFTSRGPNMIDPAIFKPDVTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLH-------- 582 (767)
Q Consensus 511 ~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~-------- 582 (767)
.||++|| +|+|||++|+++++.. .|..++|||||||||||++|||+|++
T Consensus 215 ~~S~~g~----------~v~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~ 271 (320)
T 2z30_A 215 SFSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQKYGKIL 271 (320)
T ss_dssp TTSCSSC----------SEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccCCCC----------CEEeCCCCeEEeccCC-------------CeEeccCHHHHHHHHHHHHHHHHHhchhhccccc
Confidence 8999997 7899999999998763 79999999999999999999999999
Q ss_pred -----CCCCHHHHHHHHHhccccccCCCCcccCCCCCCCCCCCccCCCccCccCcCCC
Q 040503 583 -----PDWSPAAIKSAIMTTARAEDSSNRPILDQNTGEKATPFAYGAGHVNPNSALDP 635 (767)
Q Consensus 583 -----P~~sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 635 (767)
|.|++.+||++|++||+++... ..+..||||+||+.+|++.
T Consensus 272 ~~~~~p~lt~~~v~~~L~~ta~~~~~~------------g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 272 PVGTFDDISKNTVRGILHITADDLGPT------------GWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp CCCCTTCCSTTSHHHHHHHHSBCCSSS------------SSBTTTBTCBCCHHHHHHH
T ss_pred ccccCCCCCHHHHHHHHHhhCccCCCC------------CCCCCcCCceeCHHHHHHH
Confidence 9999999999999999876322 2346799999999999864
No 20
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=5.7e-50 Score=428.65 Aligned_cols=273 Identities=23% Similarity=0.306 Sum_probs=218.2
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
+++|+....++||+|||||||||++||+|.++. +.+..++..+.
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~~-------------------------~~~~~~~~~~~----------- 54 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGAD-------------------------LTRLPSLVSGE----------- 54 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTCE-------------------------EEECC-----------------
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCCc-------------------------ccCCCcccCCC-----------
Confidence 479999987899999999999999999997641 11122222210
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhc
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHD 292 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~ 292 (767)
.....|..||||||||||+|+.. +.+.||||+|+|+.+|++.+.+. .+....+++||+||+++
T Consensus 55 -----~~~~~d~~gHGThVAGiiag~~~----------~~~~GVAp~a~l~~~kv~~~~~~--~~~~~~i~~ai~~a~~~ 117 (306)
T 4h6w_A 55 -----ANANGSMSTHGTHVASIIFGQHD----------SPVTGIAPQCRGLIVPVFADESL--KLSQLDLSRAIEQAVNN 117 (306)
T ss_dssp ---------CCCCHHHHHHHHHHHCCTT----------SSSCCSSTTSEEEECCCCCSSSC--CCCHHHHHHHHHHHHHT
T ss_pred -----CCCCCCCCCchHHHHHHHHcccc----------CCcceeccccccceeeccccccc--cchHHHHHHHHHHhhcc
Confidence 12334678999999999998742 23489999999999999865432 36788899999999999
Q ss_pred CCcEEEeccCCCC-ccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcccCCCceEEeccccCcceeeeeEEecCcee
Q 040503 293 GVDVISASLGSIA-REHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGSVENVAPWILTVGASTTDREFTSYVTLGNKMV 371 (767)
Q Consensus 293 gvdVIn~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~~~~ 371 (767)
+++|||+|||... .......+..++..+.++|++||++|||+|......++..+++|+|||++..
T Consensus 118 g~~vi~~s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~-------------- 183 (306)
T 4h6w_A 118 GANIINVSAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ-------------- 183 (306)
T ss_dssp TCSEEEECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT--------------
T ss_pred cceeeeccccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC--------------
Confidence 9999999999752 2344566788888999999999999999997776667778999999986532
Q ss_pred EeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCceEEEEe
Q 040503 372 IKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAVGMILV 451 (767)
Q Consensus 372 ~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~g~i~~ 451 (767)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCcccceEEe
Q 040503 452 SSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFKPDVTA 531 (767)
Q Consensus 452 ~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~A 531 (767)
+.++.||++|+. ..||||+|
T Consensus 184 -------------------------------------------------------~~~~~~s~~g~~-----~~~~di~A 203 (306)
T 4h6w_A 184 -------------------------------------------------------GKPVDFSNWGDA-----YQKQGILA 203 (306)
T ss_dssp -------------------------------------------------------SCBCSSSCBCHH-----HHHHEEEE
T ss_pred -------------------------------------------------------CCccccccccCC-----cCcceeec
Confidence 456788999854 46899999
Q ss_pred CCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHh----CCCCCHHHHHHHHHhccccccCCCCc
Q 040503 532 PGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTL----HPDWSPAAIKSAIMTTARAEDSSNRP 607 (767)
Q Consensus 532 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~P~~sp~~ik~~L~~TA~~~~~~g~~ 607 (767)
||++|+++++.. .|..++|||||||||||++|||+++ +|.|+|+|||++|++||+++...+
T Consensus 204 PG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~-- 268 (306)
T 4h6w_A 204 PGKDILGAKPNG-------------GTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD-- 268 (306)
T ss_dssp ECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT--
T ss_pred CCcCcccccCCC-------------ceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC--
Confidence 999999998763 7999999999999999999999864 699999999999999999874332
Q ss_pred ccCCCCCCCCCCCccCCCccCccCcCCC
Q 040503 608 ILDQNTGEKATPFAYGAGHVNPNSALDP 635 (767)
Q Consensus 608 ~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 635 (767)
......||+|+||+.+|++.
T Consensus 269 --------~~~~~~~G~G~ln~~~Av~~ 288 (306)
T 4h6w_A 269 --------TDDQSRCLMGKLNILDAIEH 288 (306)
T ss_dssp --------CSCGGGGTTCBCCHHHHHHH
T ss_pred --------CCCCCCcceeecCHHHHHHH
Confidence 22345799999999999973
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=1.1e-49 Score=433.67 Aligned_cols=270 Identities=20% Similarity=0.136 Sum_probs=216.5
Q ss_pred ccccccCCCCC--ceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCC
Q 040503 133 DSAWKKARFGE--DVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNP 210 (767)
Q Consensus 133 ~~~~~~~~~G~--gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 210 (767)
..+|+. .+|+ ||+||||||||| +||+|.++ ++..++|..+-
T Consensus 33 ~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~--------------------------~~~~~~~~~~~--------- 75 (347)
T 2iy9_A 33 TETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS--------------------------EFAKFSFTQDG--------- 75 (347)
T ss_dssp CHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC--------------------------EEEEEECBTTC---------
T ss_pred HHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC--------------------------cccCCcccCCC---------
Confidence 478988 8999 999999999999 99999753 33444444320
Q ss_pred CCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhh
Q 040503 211 DAVIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAI 290 (767)
Q Consensus 211 ~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~ 290 (767)
.+.....+.|..||||||||||+|. .|+ .||||+|+|+.+|++++.+ .. ++++||+||+
T Consensus 76 ---~~~~~~~~~d~~gHGT~vAgiia~~-------~g~-----~GvAp~a~l~~~~v~~~~~----~~--~~~~ai~~a~ 134 (347)
T 2iy9_A 76 ---SPFPVKKSEALYIHGTAMASLIASR-------YGI-----YGVYPHALISSRRVIPDGV----QD--SWIRAIESIM 134 (347)
T ss_dssp ---CSSCCSSSHHHHHHHHHHHHHHHCS-------SSS-----CCSSTTCEEEEEECCSSBC----TT--HHHHHHHHHH
T ss_pred ---CCCCCCCCCCCCCcHHHHHHHHhcc-------cCC-----cccCCCCEEEEEEEecCCC----HH--HHHHHHHHHH
Confidence 0011224567889999999999997 233 8999999999999997754 22 9999999999
Q ss_pred hc------CCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCC-------CCcccCCC----------c
Q 040503 291 HD------GVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDD-------GSVENVAP----------W 347 (767)
Q Consensus 291 ~~------gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-------~~~~~~~p----------~ 347 (767)
++ |++|||||||..........+..++..+.++|++||+||||+|... ..+++..+ +
T Consensus 135 ~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~ 214 (347)
T 2iy9_A 135 SNVFLAPGEEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDP 214 (347)
T ss_dssp TCTTSCTTEEEEEEESSCBCCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCC
T ss_pred hhhhcccCCceEEEeccccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCC
Confidence 99 9999999999764344567788888899999999999999999753 34445567 9
Q ss_pred eEEeccccC--cceeeeeEEecCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEE
Q 040503 348 ILTVGASTT--DREFTSYVTLGNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKIL 425 (767)
Q Consensus 348 vitVgA~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv 425 (767)
+|+|||++. +...
T Consensus 215 vi~Vga~~~~~~g~~----------------------------------------------------------------- 229 (347)
T 2iy9_A 215 VIRVAALAQYRKGET----------------------------------------------------------------- 229 (347)
T ss_dssp EEEEEEECCCCTTSC-----------------------------------------------------------------
T ss_pred EEEEEEcccCCCCce-----------------------------------------------------------------
Confidence 999999764 2100
Q ss_pred EEecCCchhHHHHHHHHcCceEEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCC
Q 040503 426 ICYGARYGDEKGQWAAQAGAVGMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRP 505 (767)
Q Consensus 426 l~~~g~~~~~~~~~~~~~G~~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~ 505 (767)
...
T Consensus 230 -----------------------------------------------------------------------------~~~ 232 (347)
T 2iy9_A 230 -----------------------------------------------------------------------------PVL 232 (347)
T ss_dssp -----------------------------------------------------------------------------CCB
T ss_pred -----------------------------------------------------------------------------ecc
Confidence 000
Q ss_pred CCceecccCCCCCCCCCCcccceEEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCC
Q 040503 506 SRMMAFFTSRGPNMIDPAIFKPDVTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDW 585 (767)
Q Consensus 506 ~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~ 585 (767)
....+.||++||+ ||||+|||++|+++++.. .|..++|||||||||||++|||+|++|+|
T Consensus 233 ~~~~~~fS~~G~~-------~~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~p~l 292 (347)
T 2iy9_A 233 HGGGITGSRFGNN-------WVDIAAPGQNITFLRPDA-------------KTGTGSGTSEATAIVSGVLAAMTSCNPRA 292 (347)
T ss_dssp CCCSSSCBCBCTT-------TCSEEEECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHCTTS
T ss_pred cCCCCCCCCCCCC-------CCEEEeCCCCeEeecCCC-------------CeEeccchHHHHHHHHHHHHHHHHhCCCC
Confidence 1345799999984 669999999999998753 79999999999999999999999999999
Q ss_pred CHHHHHHHHHhccccccCCCCcccCCCCCCCCCCCccCCCccCccCcCCC
Q 040503 586 SPAAIKSAIMTTARAEDSSNRPILDQNTGEKATPFAYGAGHVNPNSALDP 635 (767)
Q Consensus 586 sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 635 (767)
++.+||++|++||+++... ....+|+|+||+.+|++.
T Consensus 293 t~~~v~~~L~~tA~~~~~~-------------~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 293 TATELKRTLLESADKYPSL-------------VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp CHHHHHHHHHHHSEECGGG-------------TTTSGGGEECCHHHHHHH
T ss_pred CHHHHHHHHHHhCccCCCC-------------CCccccCCEecHHHHHHH
Confidence 9999999999999886432 135899999999999975
No 22
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=2.7e-48 Score=409.27 Aligned_cols=235 Identities=26% Similarity=0.359 Sum_probs=201.3
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
..+|..+.+|+||+|||||||||++||+|.++ ++..++|.++
T Consensus 19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~~------------ 60 (284)
T 1sh7_A 19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR--------------------------SVSGYDFVDN------------ 60 (284)
T ss_dssp CSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC--------------------------EEEEEETTTT------------
T ss_pred hhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC--------------------------ccccccccCC------------
Confidence 57899999999999999999999999999753 3333444332
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhc
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHD 292 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~ 292 (767)
...+.|..||||||||||+|.. .||||+|+|+.+|++++.+ .+..+++++||+|++++
T Consensus 61 -----~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g---~~~~~~~~~ai~~a~~~ 118 (284)
T 1sh7_A 61 -----DADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSG---SGTTSGVISGVDWVAQN 118 (284)
T ss_dssp -----BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTS---CBCHHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCC---CcCHHHHHHHHHHHHhC
Confidence 2245688999999999999873 6899999999999998776 47889999999999984
Q ss_pred --CCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCC-CcccCCCceEEeccccCcceeeeeEEecCc
Q 040503 293 --GVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDG-SVENVAPWILTVGASTTDREFTSYVTLGNK 369 (767)
Q Consensus 293 --gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~~ 369 (767)
+++|||||||.. ....+..++.++.++|++||+||||+|.... ..++..|++|+|||++.
T Consensus 119 ~~~~~Vin~S~G~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------- 181 (284)
T 1sh7_A 119 ASGPSVANMSLGGG----QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS------------- 181 (284)
T ss_dssp CCSSEEEEECCCBS----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT-------------
T ss_pred CCCCcEEEeCCCCC----CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC-------------
Confidence 799999999987 3466778888899999999999999997543 34456799999998643
Q ss_pred eeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCceEEE
Q 040503 370 MVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAVGMI 449 (767)
Q Consensus 370 ~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~g~i 449 (767)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCcccceE
Q 040503 450 LVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFKPDV 529 (767)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI 529 (767)
.+.++.||++||.. ||
T Consensus 182 --------------------------------------------------------~~~~~~~S~~G~~~--------di 197 (284)
T 1sh7_A 182 --------------------------------------------------------SDSRSSFSNWGSCV--------DL 197 (284)
T ss_dssp --------------------------------------------------------TSBBCTTCCBSTTC--------CE
T ss_pred --------------------------------------------------------CCCcCcccCCCCcc--------EE
Confidence 14678999999976 99
Q ss_pred EeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccc
Q 040503 530 TAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTARAE 601 (767)
Q Consensus 530 ~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~ 601 (767)
+|||++|+++++.. .|..++|||||||||||++|||+|++|+|+++|||++|++||++.
T Consensus 198 ~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 256 (284)
T 1sh7_A 198 FAPGSQIKSAWYDG-------------GYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASEN 256 (284)
T ss_dssp EEECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred EeccCCeEEecCCC-------------CEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccC
Confidence 99999999998763 799999999999999999999999999999999999999999875
No 23
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=1.2e-48 Score=424.52 Aligned_cols=298 Identities=23% Similarity=0.316 Sum_probs=220.0
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCC-CCcccCCccc---ceeEEcccchhhhhccC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDN-YKGVSCNKKL---IGIRYINQGTIEELRAK 208 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~-~~~~~~n~ki---~g~~~~~~~~~~~~~~~ 208 (767)
..+|+.+++|+||+||||||||+ +||+|.++-. ..|+ .... ......+.+. .....+.+.+... +
T Consensus 22 ~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~----~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~-- 90 (340)
T 3lpc_A 22 DKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVL----PGYD---FISNSQISLDGDGRDADPFDEGDWFDNWACG-G-- 90 (340)
T ss_dssp HHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBC----CCEE---CCCCHHHHCSSSSSBSCCBCCCCCBCTTTTS-C--
T ss_pred HHHHHhcCCCCCeEEEEEcCCCC-CChhhhcccc----cCcc---ccCCccccccCCCccCCcccccccccccccc-C--
Confidence 58999999999999999999998 9999976411 1111 0000 0000000000 0000000000000 0
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHH
Q 040503 209 NPDAVIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDL 288 (767)
Q Consensus 209 ~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~ 288 (767)
.+.+.....|..||||||||||+|...++. | +.||||+|+|+.+|+++..+ +..++++++|+|
T Consensus 91 -----~~~~~~~~~d~~gHGT~vAgiia~~~~~~~---g-----~~GvAp~a~l~~~~v~~~~~----~~~~~~~~ai~~ 153 (340)
T 3lpc_A 91 -----RPDPRKERSDSSWHGSHVAGTIAAVTNNRI---G-----VAGVAYGAKVVPVRALGRCG----GYDSDISDGLYW 153 (340)
T ss_dssp -----TTCGGGSCBCCCCHHHHHHHHHHCCCSSSS---S-----CCCTTTTSEEEEEECCBTTB----CCHHHHHHHHHH
T ss_pred -----CCCcccCCCCCCCCHHHHHHHHHccCCCCC---c-----ceeecCCCEEEEEEEecCCC----CcHHHHHHHHHH
Confidence 111123467899999999999999864432 2 38999999999999998776 788999999999
Q ss_pred hhh----------cCCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCC-CcccCCCceEEeccccCc
Q 040503 289 AIH----------DGVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDG-SVENVAPWILTVGASTTD 357 (767)
Q Consensus 289 a~~----------~gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~ 357 (767)
|++ .+++|||||||... .....+..++.++.++|++||+||||+|.... ..++..+++|+|||++.
T Consensus 154 a~~~~~~~~~~~~~~~~Vin~S~G~~~--~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~- 230 (340)
T 3lpc_A 154 AAGGRIAGIPENRNPAKVINMSLGSDG--QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTS- 230 (340)
T ss_dssp HHTCCCTTSCCCSSCCSEEEECCCEES--CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECT-
T ss_pred HhcccccccccccCCCeEEEeCcCCCC--CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCC-
Confidence 998 88999999999752 23455777788899999999999999997643 34566789999999643
Q ss_pred ceeeeeEEecCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHH
Q 040503 358 REFTSYVTLGNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKG 437 (767)
Q Consensus 358 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~ 437 (767)
T Consensus 231 -------------------------------------------------------------------------------- 230 (340)
T 3lpc_A 231 -------------------------------------------------------------------------------- 230 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHcCceEEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCC
Q 040503 438 QWAAQAGAVGMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGP 517 (767)
Q Consensus 438 ~~~~~~G~~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp 517 (767)
.+.++.||++||
T Consensus 231 --------------------------------------------------------------------~~~~~~~S~~g~ 242 (340)
T 3lpc_A 231 --------------------------------------------------------------------RGIRASFSNYGV 242 (340)
T ss_dssp --------------------------------------------------------------------TSSBCTTCCBST
T ss_pred --------------------------------------------------------------------CCCcCCCCCCCC
Confidence 246789999998
Q ss_pred CCCCCCcccceEEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHh-C---CCCCHHHHHHH
Q 040503 518 NMIDPAIFKPDVTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTL-H---PDWSPAAIKSA 593 (767)
Q Consensus 518 ~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---P~~sp~~ik~~ 593 (767)
. |||+|||++|+++++..... .....|..++|||||||||||++|||+|+ + |.+++++||++
T Consensus 243 ~--------~di~ApG~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~ 308 (340)
T 3lpc_A 243 D--------VDLAAPGQDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDV 308 (340)
T ss_dssp T--------CCEEEECSSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred C--------ceEEecCCCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHH
Confidence 4 49999999999998764321 11236999999999999999999999998 5 99999999999
Q ss_pred HHhccccccCCCCcccCCCCCCCCCCCccCCCccCccCcCCCC
Q 040503 594 IMTTARAEDSSNRPILDQNTGEKATPFAYGAGHVNPNSALDPG 636 (767)
Q Consensus 594 L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~g 636 (767)
|++||++... .+...+|||+||+.+|++..
T Consensus 309 L~~tA~~~~~-------------~~~~~~G~G~vd~~~Av~~~ 338 (340)
T 3lpc_A 309 LVSTTSPFNG-------------RLDRALGSGIVDAEAAVNSV 338 (340)
T ss_dssp HHHTCBCCSS-------------CCSSCCCSSBCCHHHHHHHH
T ss_pred HHhcCCcCCC-------------CCCCCcccceecHHHHHHHH
Confidence 9999987631 23468999999999998753
No 24
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=4e-48 Score=433.62 Aligned_cols=294 Identities=26% Similarity=0.323 Sum_probs=224.1
Q ss_pred ccccc-cCCCCCceEEEEecccCCC------CCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhh
Q 040503 133 DSAWK-KARFGEDVIIANVDSGVWP------ESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEEL 205 (767)
Q Consensus 133 ~~~~~-~~~~G~gV~VgVIDtGid~------~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~ 205 (767)
+.+|. .+++|+||+|||||||||+ .||+|.++ +...+.|.+
T Consensus 11 ~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~--------------------------i~~~~~~~~------ 58 (434)
T 1wmd_A 11 DVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK--------------------------ITALYALGR------ 58 (434)
T ss_dssp HHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC--------------------------EEEEEETTT------
T ss_pred hhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC--------------------------EeeeccccC------
Confidence 47897 7999999999999999999 79999753 333344422
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHH
Q 040503 206 RAKNPDAVIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSA 285 (767)
Q Consensus 206 ~~~~~~~~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~a 285 (767)
...+.|..||||||||||+|+.. .+.||||+|+|+++|+++..+.. .+..+++.++
T Consensus 59 ------------~~~~~d~~gHGT~VAgiiag~g~-----------~~~GvAp~a~l~~~~v~~~~g~~-~~~~~~~~~a 114 (434)
T 1wmd_A 59 ------------TNNANDTNGHGTHVAGSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGL-GGLPSNLQTL 114 (434)
T ss_dssp ------------TTCCCCSSSHHHHHHHHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSC-TTSCSSHHHH
T ss_pred ------------CCCCCCCCCcHHHHHHHHHcCCC-----------CceeeCCCCEEEEEEeecCCCcc-ccccHHHHHH
Confidence 12456889999999999998641 14799999999999999876521 1245789999
Q ss_pred HHHhhhcCCcEEEeccCCCCccCcccHHHHHHHHH-HhCCCEEEEecCCCCCCCCCc--ccCCCceEEeccccCcceeee
Q 040503 286 YDLAIHDGVDVISASLGSIAREHLKNTIAIGSFHA-MMNGIVSVAAAGNSGPDDGSV--ENVAPWILTVGASTTDREFTS 362 (767)
Q Consensus 286 id~a~~~gvdVIn~SlG~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~G~~~~~~--~~~~p~vitVgA~~~~~~~~~ 362 (767)
|++|+++|++|||||||...... .+....++.++ .++|++||+||||+|...... ++.++++|+|||++..+..
T Consensus 115 i~~a~~~g~~Vin~S~G~~~~~~-~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~-- 191 (434)
T 1wmd_A 115 FSQAYSAGARIHTNSWGAAVNGA-YTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPS-- 191 (434)
T ss_dssp HHHHHHTTCSEEEECCCBCCTTC-CCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGG--
T ss_pred HHHHHhcCCeEEEecCCCCcCCc-CCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCcc--
Confidence 99999999999999999874221 23445556555 589999999999999765443 4567999999997653200
Q ss_pred eEEecCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHH
Q 040503 363 YVTLGNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQ 442 (767)
Q Consensus 363 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~ 442 (767)
. . .
T Consensus 192 -------------------~----~---------------------~--------------------------------- 194 (434)
T 1wmd_A 192 -------------------F----G---------------------S--------------------------------- 194 (434)
T ss_dssp -------------------G----C---------------------G---------------------------------
T ss_pred -------------------c----C---------------------c---------------------------------
Confidence 0 0 0
Q ss_pred cCceEEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCC
Q 040503 443 AGAVGMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDP 522 (767)
Q Consensus 443 ~G~~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~ 522 (767)
.....+.++.||++||+. +
T Consensus 195 -----------------------------------------------------------~~~~~~~~a~fS~~G~~~--~ 213 (434)
T 1wmd_A 195 -----------------------------------------------------------YADNINHVAQFSSRGPTK--D 213 (434)
T ss_dssp -----------------------------------------------------------GGSCTTSBCTTSCCCCCT--T
T ss_pred -----------------------------------------------------------ccCCCCccccccCCCCCC--C
Confidence 001136789999999998 8
Q ss_pred CcccceEEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCC-----CHHHHHHHHHhc
Q 040503 523 AIFKPDVTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDW-----SPAAIKSAIMTT 597 (767)
Q Consensus 523 ~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~-----sp~~ik~~L~~T 597 (767)
+++||||+|||++|+++++........ .......|..++|||||||||||++|||+|++|++ ++++||++|++|
T Consensus 214 g~~kpdi~ApG~~i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~t 292 (434)
T 1wmd_A 214 GRIKPDVMAPGTFILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAG 292 (434)
T ss_dssp SCCCCCEEEECSSEEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHH
T ss_pred CCCCceEEcCCCCeEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcC
Confidence 999999999999999998643210000 00113489999999999999999999999999875 899999999999
Q ss_pred cccccCCCCcccCCCCCCCCCCCccCCCccCccCcCCCC
Q 040503 598 ARAEDSSNRPILDQNTGEKATPFAYGAGHVNPNSALDPG 636 (767)
Q Consensus 598 A~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~g 636 (767)
|+++.. ..+.+.||||++|+.+|++..
T Consensus 293 A~~~~~------------~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 293 AADIGL------------GYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp CBCCSS------------CSSCTTTTTCBCCHHHHHTCE
T ss_pred CcccCC------------CCCCccCCcCeEeHHHhcccc
Confidence 986421 235678999999999999754
No 25
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=6.1e-48 Score=406.01 Aligned_cols=237 Identities=27% Similarity=0.359 Sum_probs=200.9
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
..+|..+++|+||+|+|||||||++||+|.++ +...++|.++
T Consensus 21 ~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~--------------------------~~~~~d~~~~------------ 62 (278)
T 2b6n_A 21 DNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR--------------------------ASSGYDFIDN------------ 62 (278)
T ss_dssp CSEEECSCCCTTCEEEEEESCCCTTCGGGTTC--------------------------EEEEEETTTT------------
T ss_pred chhcccCCCCCCCEEEEEeCCCCCCChhHhcc--------------------------cccCeecCCC------------
Confidence 57899999999999999999999999999753 3333444322
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhh-
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIH- 291 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~- 291 (767)
...+.|..||||||||||+|.. .||||+|+|+.+|++++.+ .+..++++++|+|+++
T Consensus 63 -----~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g---~~~~~~~~~ai~~a~~~ 120 (278)
T 2b6n_A 63 -----DYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSG---SGSNSGVIAGINWVKNN 120 (278)
T ss_dssp -----BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS---CCCHHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCC---CccHHHHHHHHHHHHhC
Confidence 2245688999999999999873 6899999999999998776 4788999999999997
Q ss_pred -cCCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCC-cccCCCceEEeccccCcceeeeeEEecCc
Q 040503 292 -DGVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGS-VENVAPWILTVGASTTDREFTSYVTLGNK 369 (767)
Q Consensus 292 -~gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgA~~~~~~~~~~~~~~~~ 369 (767)
.+++|||||||... ...+..++.++.++|++||+||||+|..... .+...+++|+|||++.+
T Consensus 121 ~~g~~Vin~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------ 184 (278)
T 2b6n_A 121 ASGPAVANMSLGGGA----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSN------------ 184 (278)
T ss_dssp CCSSEEEEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT------------
T ss_pred CCCCeEEEECCCCCc----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCCC------------
Confidence 58999999999863 4567778888999999999999999976433 34567899999986431
Q ss_pred eeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCceEEE
Q 040503 370 MVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAVGMI 449 (767)
Q Consensus 370 ~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~g~i 449 (767)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCcccceE
Q 040503 450 LVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFKPDV 529 (767)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI 529 (767)
+.++.||++||.. ||
T Consensus 185 ---------------------------------------------------------~~~~~~S~~G~~~--------di 199 (278)
T 2b6n_A 185 ---------------------------------------------------------DSRSSFSNYGTCL--------DI 199 (278)
T ss_dssp ---------------------------------------------------------SBBCTTCCBSTTC--------CE
T ss_pred ---------------------------------------------------------CCcCCcCCCCCCC--------eE
Confidence 4678899999865 99
Q ss_pred EeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccc
Q 040503 530 TAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTARAE 601 (767)
Q Consensus 530 ~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~ 601 (767)
+|||++|++++.... ..|..++|||||||||||++|||+|++|+|++++||++|++||++.
T Consensus 200 ~ApG~~i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 200 YAPGSSITSSWYTSN-----------SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp EEECSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred EeCCCCeECcccCCC-----------CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 999999999986532 2799999999999999999999999999999999999999999874
No 26
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=2e-47 Score=402.26 Aligned_cols=236 Identities=27% Similarity=0.361 Sum_probs=202.4
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
..+|..+.+|+||+|||||||||++||+|.++ +...++|..
T Consensus 21 ~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~------------- 61 (276)
T 4dzt_A 21 SNSYTYTATGRGVNVYVIDTGIRTTHREFGGR--------------------------ARVGYDALG------------- 61 (276)
T ss_dssp CSCEECSCCCTTCEEEEEESCCCTTCGGGTTC--------------------------EEEEEETTS-------------
T ss_pred ccceecCCCCCCcEEEEEccCCCCCChhHccC--------------------------eeccccCCC-------------
Confidence 57899999999999999999999999999753 333333322
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhc
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHD 292 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~ 292 (767)
..+.|..||||||||||+|.. .||||+|+|+.+|++++.+ .+..++++++|+|+++.
T Consensus 62 ------~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~---~~~~~~~~~ai~~~~~~ 118 (276)
T 4dzt_A 62 ------GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNG---SGSTSGVIAGVDWVTRN 118 (276)
T ss_dssp ------SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS---CCCHHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCC---CcCHHHHHHHHHHHHhc
Confidence 245578999999999999873 6999999999999998776 47889999999999987
Q ss_pred --CCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCc-ccCCCceEEeccccCcceeeeeEEecCc
Q 040503 293 --GVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGSV-ENVAPWILTVGASTTDREFTSYVTLGNK 369 (767)
Q Consensus 293 --gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~-~~~~p~vitVgA~~~~~~~~~~~~~~~~ 369 (767)
+++|||||||.. ....+..++.++.++|++||+||||+|...... ++..+++|+|||++.
T Consensus 119 ~~~~~vin~S~g~~----~~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------- 181 (276)
T 4dzt_A 119 HRRPAVANMSLGGG----VSTALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS------------- 181 (276)
T ss_dssp CCSSEEEEECCCEE----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT-------------
T ss_pred CCCCeEEEECCCCC----CCHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC-------------
Confidence 899999999976 356678888899999999999999999765443 466789999998543
Q ss_pred eeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCceEEE
Q 040503 370 MVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAVGMI 449 (767)
Q Consensus 370 ~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~g~i 449 (767)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCcccceE
Q 040503 450 LVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFKPDV 529 (767)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI 529 (767)
.+.++.||++||.. ||
T Consensus 182 --------------------------------------------------------~~~~~~~S~~g~~~--------dv 197 (276)
T 4dzt_A 182 --------------------------------------------------------SDARASFSNYGSCV--------DL 197 (276)
T ss_dssp --------------------------------------------------------TSBBCTTCCBSTTC--------CE
T ss_pred --------------------------------------------------------CCCcCCcCCCCCCc--------eE
Confidence 24678999999987 99
Q ss_pred EeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhcccccc
Q 040503 530 TAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTARAED 602 (767)
Q Consensus 530 ~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~ 602 (767)
+|||++|++++.... ..|..++|||||||||||++|||+|++|++++++||++|++||++..
T Consensus 198 ~ApG~~i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 198 FAPGASIPSAWYTSD-----------TATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGR 259 (276)
T ss_dssp EEECSSEEEECTTSS-----------SCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred EeCCCCeEccccCCC-----------CceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCc
Confidence 999999999987642 27999999999999999999999999999999999999999998864
No 27
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=1.5e-47 Score=402.44 Aligned_cols=240 Identities=27% Similarity=0.351 Sum_probs=201.8
Q ss_pred ccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCCCC
Q 040503 135 AWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDAVI 214 (767)
Q Consensus 135 ~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~ 214 (767)
.|+. .+|+||+|+|||||||++||+|.++ +...++|.
T Consensus 24 ~~~~-~~G~gv~VaViDsGvd~~H~~l~~~--------------------------~~~~~~~~---------------- 60 (279)
T 2pwa_A 24 YYDE-SAGQGSCVYVIDTGIEASHPEFEGR--------------------------AQMVKTYY---------------- 60 (279)
T ss_dssp ECCT-TTTTTEEEEEEESCCCTTCGGGTTC--------------------------EEEEEESS----------------
T ss_pred cccC-CCCCCCEEEEEeCCCCCCChhHhCc--------------------------cccccCCC----------------
Confidence 4543 7999999999999999999999753 33333333
Q ss_pred CCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhcCC
Q 040503 215 PQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHDGV 294 (767)
Q Consensus 215 ~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~gv 294 (767)
..+.|..||||||||||+|+. .||||+|+|+.+|++++.+ .+..+++++||+|++++++
T Consensus 61 ----~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g---~~~~~~~~~ai~~a~~~~~ 119 (279)
T 2pwa_A 61 ----YSSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNG---SGQYSTIIAGMDFVASDKN 119 (279)
T ss_dssp ----SCSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS---CCCHHHHHHHHHHHHHHGG
T ss_pred ----CCCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCC---CcCHHHHHHHHHHHHhcCc
Confidence 134578999999999999873 7899999999999998876 4788999999999999887
Q ss_pred -------cEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCC-cccCCCceEEeccccCcceeeeeEEe
Q 040503 295 -------DVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGS-VENVAPWILTVGASTTDREFTSYVTL 366 (767)
Q Consensus 295 -------dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgA~~~~~~~~~~~~~ 366 (767)
+|||||||.. ..+.+..++.++.++|++||+||||+|..... .++..|++|+|||++.+
T Consensus 120 ~~~~~~~~Vin~S~G~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--------- 186 (279)
T 2pwa_A 120 NRNCPKGVVASLSLGGG----YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY--------- 186 (279)
T ss_dssp GSCCTTEEEEEECCCEE----CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT---------
T ss_pred cccCCCccEEEecCCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC---------
Confidence 9999999975 34677888889999999999999999976432 34567999999996432
Q ss_pred cCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCce
Q 040503 367 GNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAV 446 (767)
Q Consensus 367 ~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~ 446 (767)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCccc
Q 040503 447 GMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFK 526 (767)
Q Consensus 447 g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~K 526 (767)
+.++.||++||..
T Consensus 187 ------------------------------------------------------------~~~~~~S~~G~~~------- 199 (279)
T 2pwa_A 187 ------------------------------------------------------------DRRSSFSNYGSVL------- 199 (279)
T ss_dssp ------------------------------------------------------------SBBCTTCCBSTTC-------
T ss_pred ------------------------------------------------------------CCcCCcCCCCCcc-------
Confidence 4678999999976
Q ss_pred ceEEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCCC
Q 040503 527 PDVTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTARAEDSSNR 606 (767)
Q Consensus 527 PDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~g~ 606 (767)
||+|||++|+++++.. .|..++|||||||||||++|||+|+ |+++|.+||++|++||++..
T Consensus 200 -di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~---- 260 (279)
T 2pwa_A 200 -DIFGPGTDILSTWIGG-------------STRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGD---- 260 (279)
T ss_dssp -CEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESC----
T ss_pred -eEEEecCCeEEeecCC-------------CEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCcccc----
Confidence 9999999999999763 7999999999999999999999999 99999999999999998742
Q ss_pred cccCCCCCCCCCCCccCCCccCc
Q 040503 607 PILDQNTGEKATPFAYGAGHVNP 629 (767)
Q Consensus 607 ~~~~~~~~~~~~~~~~G~G~vd~ 629 (767)
...+|+|..|+
T Consensus 261 ------------~~~~~~g~~n~ 271 (279)
T 2pwa_A 261 ------------LSNIPFGTVNL 271 (279)
T ss_dssp ------------CBSCCTTSCCE
T ss_pred ------------cCCCCCCCccE
Confidence 12467787776
No 28
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=8e-47 Score=452.23 Aligned_cols=264 Identities=27% Similarity=0.319 Sum_probs=199.3
Q ss_pred CCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhh-----cCCcE
Q 040503 222 RDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIH-----DGVDV 296 (767)
Q Consensus 222 ~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~-----~gvdV 296 (767)
.|++||||||||||||.. ++ ..+.||||+|+|+.+|+++..... .+....++.+|.+|++ .|++|
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~--------~g~~GVAP~AkI~~vKVld~~~g~-~~t~s~l~~AI~~Aid~a~~~~gadV 336 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SS--------RDVDGVAPNAKIVSMTIGDGRLGS-METGTALVRAMTKVMELCRDGRRIDV 336 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SS--------SSSCCSCTTCEEEEEECBCTTTSS-CBCHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred CCCCCcHHHHHHHHhcCC-CC--------CCceeecCCCEEEEEEeccCCCCc-ccChHHHHHHHHHHHHHHhhcCCceE
Confidence 478999999999999985 22 234899999999999998765411 2355678888888877 79999
Q ss_pred EEeccCCCCccCcccHHHHHHHHHH-hCCCEEEEecCCCCCCCCCcc--c--CCCceEEeccccCcceeeeeEEecCcee
Q 040503 297 ISASLGSIAREHLKNTIAIGSFHAM-MNGIVSVAAAGNSGPDDGSVE--N--VAPWILTVGASTTDREFTSYVTLGNKMV 371 (767)
Q Consensus 297 In~SlG~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~G~~~~~~~--~--~~p~vitVgA~~~~~~~~~~~~~~~~~~ 371 (767)
||||||........+.+..++.++. ++|++||+||||+|+...+.. + ..+++|+|||++...........
T Consensus 337 INmS~G~~~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~----- 411 (1354)
T 3lxu_X 337 INMSYGEHANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM----- 411 (1354)
T ss_dssp EEECCCCCCSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC---------
T ss_pred EEcCCccCCCCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc-----
Confidence 9999999853334566777888886 899999999999998655443 3 36999999997654311000000
Q ss_pred EeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCceEEEEe
Q 040503 372 IKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAVGMILV 451 (767)
Q Consensus 372 ~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~g~i~~ 451 (767)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCcccceEEe
Q 040503 452 SSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFKPDVTA 531 (767)
Q Consensus 452 ~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~A 531 (767)
.....+.++.|||+||+. ++++||||+|
T Consensus 412 --------------------------------------------------~~~~~g~~asFSS~GPt~--dg~~KpDIaA 439 (1354)
T 3lxu_X 412 --------------------------------------------------REKLPGNVYTWTSRDPCI--DGGQGVTVCA 439 (1354)
T ss_dssp --------------------------------------------------------CCCCCCCCSCCS--SSSCCEEEEE
T ss_pred --------------------------------------------------ccCCCCccccccCCCCCc--cCCCcceEEe
Confidence 000125789999999998 8999999999
Q ss_pred CCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHH----hCCCCCHHHHHHHHHhccccccCCCCc
Q 040503 532 PGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKT----LHPDWSPAAIKSAIMTTARAEDSSNRP 607 (767)
Q Consensus 532 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~P~~sp~~ik~~L~~TA~~~~~~g~~ 607 (767)
||++|+++..... +.|..++|||||||||||++|||++ .+|.|++++||++|++||++.+.
T Consensus 440 PG~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~---- 504 (1354)
T 3lxu_X 440 PGGAIASVPQFTM-----------SKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY---- 504 (1354)
T ss_dssp EC--------------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT----
T ss_pred cCceEEEeecCCC-----------CceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC----
Confidence 9999999765321 2789999999999999999999986 89999999999999999987642
Q ss_pred ccCCCCCCCCCCCccCCCccCccCcCCCCccccCCcchhhhhhccCCCC
Q 040503 608 ILDQNTGEKATPFAYGAGHVNPNSALDPGLVYDLTFEDYLGYICDRGYN 656 (767)
Q Consensus 608 ~~~~~~~~~~~~~~~G~G~vd~~~A~~~glv~d~~~~~~~~~~~~~~~~ 656 (767)
.+++.||||+||+.+|++..+.|+....+++.|+|.++.+
T Consensus 505 ---------~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~ 544 (1354)
T 3lxu_X 505 ---------VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNN 544 (1354)
T ss_dssp ---------SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTT
T ss_pred ---------CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCC
Confidence 2456899999999999999999999999999999998853
No 29
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=4.3e-47 Score=441.34 Aligned_cols=300 Identities=20% Similarity=0.241 Sum_probs=205.1
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
..+|..+++|+||+|||||||||++||+|.++ .+.+.++|..+.
T Consensus 60 ~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~-------------------------~~~~~~~~~~~~----------- 103 (600)
T 2oxa_A 60 WWAHRTGVLGHGVNVAVVDDGLAIAHPDLADN-------------------------VRPGSKNVVTGS----------- 103 (600)
T ss_dssp HHHHHTTCSCTTCEEEEESSCCCTTCTTTGGG-------------------------BCSCCBCTTTCS-----------
T ss_pred HHHHhcCCCCCCcEEEEecCCcCCCCcchhhc-------------------------cccCceeccCCC-----------
Confidence 68999999999999999999999999999853 111223333221
Q ss_pred CCCCCCCCCCC-CCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhh
Q 040503 213 VIPQNLTTGRD-EEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIH 291 (767)
Q Consensus 213 ~~~~~~~~~~D-~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~ 291 (767)
....|.| ..||||||||||||. .++. | +.||||+|+|+.+|+++..+.. .....+++....+..
T Consensus 104 ----~d~~p~d~~~gHGT~vAGiiaa~-~n~~---g-----~~GVAp~A~l~~vkv~~~~~~~--~~~~~~~~~~~~a~~ 168 (600)
T 2oxa_A 104 ----DDPTPTDPDTGHGTSVSGIIAAV-DNAI---G-----TKGIAPRAQLQGFNLLDDNSQQ--LQKDWLYALGDSNAS 168 (600)
T ss_dssp ----SCCCCCSTTCCHHHHHHHHHHCC-SSSS---S-----CCCSSTTCEEEEECTTSTTCCC--CHHHHHHHTTTSHHH
T ss_pred ----CCCCCCCCCCCCccHHHHHhhcc-cCCC---c-----ceEEccCCceEEEeeecCcccc--hHHHHHHHHhhhhcc
Confidence 0123344 789999999999998 3322 2 3899999999999999876510 112444454445778
Q ss_pred cCCcEEEeccCCCCc-cCcc----cHHHHHHHH---HHhCCCEEEEecCCCCCCCC----------------------Cc
Q 040503 292 DGVDVISASLGSIAR-EHLK----NTIAIGSFH---AMMNGIVSVAAAGNSGPDDG----------------------SV 341 (767)
Q Consensus 292 ~gvdVIn~SlG~~~~-~~~~----~~~~~a~~~---a~~~Gi~vV~AAGN~G~~~~----------------------~~ 341 (767)
++++|||||||.... .... ..+..++.. +.++|++||+||||+|.... ..
T Consensus 169 ~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~ 248 (600)
T 2oxa_A 169 RDNRVFNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDP 248 (600)
T ss_dssp HTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSG
T ss_pred cCCeEEEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCC
Confidence 899999999998731 1111 222222222 44789999999999986311 01
Q ss_pred ccCCCceEEeccccCcceeeeeEEecCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCcc
Q 040503 342 ENVAPWILTVGASTTDREFTSYVTLGNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQ 421 (767)
Q Consensus 342 ~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 421 (767)
.+.++|+|+|||++.
T Consensus 249 ~~~s~~vItVgA~~~----------------------------------------------------------------- 263 (600)
T 2oxa_A 249 SNSNFWNLVVSALNA----------------------------------------------------------------- 263 (600)
T ss_dssp GGGSSSEEEEEEECT-----------------------------------------------------------------
T ss_pred cccCceeEEEecccC-----------------------------------------------------------------
Confidence 112345566665322
Q ss_pred ceEEEEecCCchhHHHHHHHHcCceEEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceee
Q 040503 422 GKILICYGARYGDEKGQWAAQAGAVGMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEF 501 (767)
Q Consensus 422 gkivl~~~g~~~~~~~~~~~~~G~~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~ 501 (767)
T Consensus 264 -------------------------------------------------------------------------------- 263 (600)
T 2oxa_A 264 -------------------------------------------------------------------------------- 263 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCceecccCCCCCCCCCCcccceEEeCCCcEEEeecC-------CCCCC--------------CCCCCCCccceee
Q 040503 502 NTRPSRMMAFFTSRGPNMIDPAIFKPDVTAPGVDIIAAFTE-------ASGPS--------------PDETHKRRIPYIM 560 (767)
Q Consensus 502 ~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~-------~~~~~--------------~~~~~~~~~~y~~ 560 (767)
.+.++.||++||+. ||+|||++|.+..+. ..... ....+.....|..
T Consensus 264 ----~g~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~ 331 (600)
T 2oxa_A 264 ----DGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGV 331 (600)
T ss_dssp ----TSSBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEE
T ss_pred ----CCCcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccc
Confidence 35789999999998 999999996443221 10000 0000112234899
Q ss_pred ecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCCCccc-------------------CCCCCCCCCCCc
Q 040503 561 MSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTARAEDSSNRPIL-------------------DQNTGEKATPFA 621 (767)
Q Consensus 561 ~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~g~~~~-------------------~~~~~~~~~~~~ 621 (767)
++|||||||||||++|||+|++|+|+|++||++|++||++++..+.++. .........++.
T Consensus 332 ~sGTS~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~ 411 (600)
T 2oxa_A 332 MNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPT 411 (600)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTT
T ss_pred cccchHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCcccccc
Confidence 9999999999999999999999999999999999999999865442211 001122234578
Q ss_pred cCCCccCccCcCCCCcccc
Q 040503 622 YGAGHVNPNSALDPGLVYD 640 (767)
Q Consensus 622 ~G~G~vd~~~A~~~glv~d 640 (767)
||||+||+.+|++....|.
T Consensus 412 ~G~G~vda~~Av~~A~~~~ 430 (600)
T 2oxa_A 412 YGFGLIDVNKALELAANHQ 430 (600)
T ss_dssp TBTCBCCHHHHHHHHTTCC
T ss_pred CCCchhhHHHHHHHHHhcc
Confidence 9999999999998655443
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.6e-46 Score=424.23 Aligned_cols=293 Identities=17% Similarity=0.201 Sum_probs=217.3
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
..+|..+++|+||+|||||||||++||+|.++- .....++|.++..
T Consensus 28 ~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~------------------------~~~~~~d~~~~~~---------- 73 (471)
T 1p8j_A 28 KEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNY------------------------DPGASFDVNDQDP---------- 73 (471)
T ss_dssp HHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGB------------------------CGGGCEETTTTBS----------
T ss_pred HHHHhcCCCCCCCEEEEEeCCcCCCChhHhhcc------------------------CccCcccccCCCC----------
Confidence 689999999999999999999999999998640 0011223332200
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhh-
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIH- 291 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~- 291 (767)
.+.+...+.|..||||||||||+|...++. .+.||||+|+|+.+|+++ +..+++++|++++++
T Consensus 74 -~p~~~~~~~d~~gHGT~vAGiiaa~~~n~~--------g~~GvAp~a~i~~~rv~~-------g~~~~~~~ai~~a~~~ 137 (471)
T 1p8j_A 74 -DPQPRYTQMNDNRHGTRCAGEVAAVANNGV--------CGVGVAYNARIGGVRMLD-------GEVTDAVEARSLGLNP 137 (471)
T ss_dssp -CCCCCCCTTCTTCHHHHHHHHHHCCSSSSS--------SCCCTTTTSEEEEEECSS-------SCCCHHHHHHHHTSCT
T ss_pred -CCCCccCCCCCCCcHHHHHHHHHeeccCCC--------CCEEECCCCeEEEEEccC-------CchhHHHHHHHhhhcc
Confidence 011112456889999999999999754332 238999999999999985 346789999999999
Q ss_pred cCCcEEEeccCCCCc----cCcccHHHHHHHHHH-----hCCCEEEEecCCCCCCCCC----cccCCCceEEeccccCcc
Q 040503 292 DGVDVISASLGSIAR----EHLKNTIAIGSFHAM-----MNGIVSVAAAGNSGPDDGS----VENVAPWILTVGASTTDR 358 (767)
Q Consensus 292 ~gvdVIn~SlG~~~~----~~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~~----~~~~~p~vitVgA~~~~~ 358 (767)
++++|||||||.... ......+..++.++. .+|++||+||||+|..... ....++++|+|||++.+
T Consensus 138 ~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~- 216 (471)
T 1p8j_A 138 NHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQF- 216 (471)
T ss_dssp TTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTT-
T ss_pred CCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCC-
Confidence 899999999998631 112233445555554 3699999999999975322 12345899999996532
Q ss_pred eeeeeEEecCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHH
Q 040503 359 EFTSYVTLGNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQ 438 (767)
Q Consensus 359 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~ 438 (767)
T Consensus 217 -------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 217 -------------------------------------------------------------------------------- 216 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHcCceEEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCC
Q 040503 439 WAAQAGAVGMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPN 518 (767)
Q Consensus 439 ~~~~~G~~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~ 518 (767)
+.++.||++||.
T Consensus 217 --------------------------------------------------------------------g~~a~~S~~g~~ 228 (471)
T 1p8j_A 217 --------------------------------------------------------------------GNVPWYSEACSS 228 (471)
T ss_dssp --------------------------------------------------------------------SCCCTTCCBCTT
T ss_pred --------------------------------------------------------------------CCcccccCCCCc
Confidence 467899999998
Q ss_pred CCCCCcccceEEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhcc
Q 040503 519 MIDPAIFKPDVTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTA 598 (767)
Q Consensus 519 ~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA 598 (767)
. ....+|...+||.+|+++.... ..|..++|||||||||||++|||+|++|+|++++||++|++||
T Consensus 229 ~--~~~~~~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA 294 (471)
T 1p8j_A 229 T--LATTYSSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTS 294 (471)
T ss_dssp C--CEEEECCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHC
T ss_pred c--eEEeCCCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcC
Confidence 7 4455666666678999997642 2689999999999999999999999999999999999999999
Q ss_pred ccccCCCCcccCCCCCCCCCCCccCCCccCccCcCCCCccc
Q 040503 599 RAEDSSNRPILDQNTGEKATPFAYGAGHVNPNSALDPGLVY 639 (767)
Q Consensus 599 ~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~glv~ 639 (767)
++.+........ ..........||||+||+.+|++....+
T Consensus 295 ~~~~~~~~~~~~-n~~g~~~~~~~G~G~vda~~Av~~a~~~ 334 (471)
T 1p8j_A 295 KPAHLNADDWAT-NGVGRKVSHSYGYGLLDAGAMVALAQNW 334 (471)
T ss_dssp BCTTCCCSCCEE-CTTSCEEBTTTBTCBCCHHHHHHHHHTC
T ss_pred ccCCCCCCCcee-cCCCcccCCCCCCEEEcHhHHHHHhhcc
Confidence 987543222211 1112224568999999999999865443
No 31
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=1.8e-45 Score=418.19 Aligned_cols=285 Identities=16% Similarity=0.194 Sum_probs=215.5
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
..+|..+++|+||+|||||||||++||+|.++- + ..+.++|.++.
T Consensus 44 ~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~-----------------~~~~~d~~~~~----------- 88 (503)
T 2id4_A 44 LDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------C-----------------AEGSWDFNDNT----------- 88 (503)
T ss_dssp HHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------C-----------------GGGCEETTTTB-----------
T ss_pred HHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------c-----------------ccCcccCCCCC-----------
Confidence 689999999999999999999999999998641 0 11223343220
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhc
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHD 292 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~ 292 (767)
.+..+..|..||||||||||+|...++. | +.||||+|+|+.+|+++.. +...++++||+||+++
T Consensus 89 ---~~~~p~~d~~gHGT~vAGiiaa~~~n~~---~-----~~GvAp~a~i~~~rv~~~~-----~~~~~~~~ai~~a~~~ 152 (503)
T 2id4_A 89 ---NLPKPRLSDDYHGTRCAGEIAAKKGNNF---C-----GVGVGYNAKISGIRILSGD-----ITTEDEAASLIYGLDV 152 (503)
T ss_dssp ---SCCCCCSTTTTHHHHHHHHHHCCSSSSS---S-----CCCTTTTSEEEEEECTTSC-----CCHHHHHHHTTTTTTT
T ss_pred ---CCCCCCCCCCChHHHHHHHHHhccCCCC---C-----cEEECCCCEEEEEEeeCCC-----CChHHHHHHHHhHhhc
Confidence 0112235788999999999999764332 2 3799999999999998742 6788999999999998
Q ss_pred CCcEEEeccCCCCc----cCcccHHHHHHHHHH-----hCCCEEEEecCCCCCCCCC--cc--cCCCceEEeccccCcce
Q 040503 293 GVDVISASLGSIAR----EHLKNTIAIGSFHAM-----MNGIVSVAAAGNSGPDDGS--VE--NVAPWILTVGASTTDRE 359 (767)
Q Consensus 293 gvdVIn~SlG~~~~----~~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~~--~~--~~~p~vitVgA~~~~~~ 359 (767)
+ +|||||||.... ......+..++.++. .+|++||+||||+|..... .. ...+++|+|||++.+
T Consensus 153 ~-~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~-- 229 (503)
T 2id4_A 153 N-DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHK-- 229 (503)
T ss_dssp C-SEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTT--
T ss_pred C-CEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCC--
Confidence 8 999999998631 112344666666665 4799999999999965332 22 245789999986532
Q ss_pred eeeeEEecCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHH
Q 040503 360 FTSYVTLGNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQW 439 (767)
Q Consensus 360 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~ 439 (767)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHcCceEEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCC
Q 040503 440 AAQAGAVGMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNM 519 (767)
Q Consensus 440 ~~~~G~~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~ 519 (767)
+.++.||++||..
T Consensus 230 -------------------------------------------------------------------~~~a~~S~~g~~~ 242 (503)
T 2id4_A 230 -------------------------------------------------------------------DLHPPYSEGCSAV 242 (503)
T ss_dssp -------------------------------------------------------------------SCCCTTCCCCTTE
T ss_pred -------------------------------------------------------------------CCcCCcCCCCCcc
Confidence 4678999999988
Q ss_pred CCCCcccceEEe----CCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHH
Q 040503 520 IDPAIFKPDVTA----PGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIM 595 (767)
Q Consensus 520 ~~~~~~KPDI~A----PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~ 595 (767)
|++| ||..|+++.... ..|..++|||||||||||++|||+|++|+|++++||++|+
T Consensus 243 --------~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~ 302 (503)
T 2id4_A 243 --------MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSI 302 (503)
T ss_dssp --------EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHH
T ss_pred --------eEeecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHH
Confidence 8988 899999995432 2799999999999999999999999999999999999999
Q ss_pred hccccccCCCCcccCCCCCCCCCCCccCCCccCccCcCCCCcc
Q 040503 596 TTARAEDSSNRPILDQNTGEKATPFAYGAGHVNPNSALDPGLV 638 (767)
Q Consensus 596 ~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~glv 638 (767)
+||++++....+-.............||||+||+.+|++...-
T Consensus 303 ~tA~~~~~~~~~~~~~~~~g~~~~~~~G~G~vda~~Av~~a~~ 345 (503)
T 2id4_A 303 LSAVGLEKNADGDWRDSAMGKKYSHRYGFGKIDAHKLIEMSKT 345 (503)
T ss_dssp HHCBCCTTCGGGCCEECSSSSEEBTTTBTCBCCHHHHHHHHTS
T ss_pred hccccCCCCcCCCceecCCCCccCcccCCcEecHHHHHHHHhc
Confidence 9999875431111100111222356899999999999986443
No 32
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=4.3e-46 Score=415.80 Aligned_cols=247 Identities=21% Similarity=0.243 Sum_probs=188.8
Q ss_pred cccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCCC
Q 040503 134 SAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDAV 213 (767)
Q Consensus 134 ~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~ 213 (767)
..|..+.+|+||+|+|||||||++||+|.++- ......+..+.+
T Consensus 17 ~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~-------------------------~~~~~~~v~~~d----------- 60 (546)
T 2qtw_B 17 DEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV-------------------------MVTDFENVPEED----------- 60 (546)
T ss_dssp -------CCTTSEEEEEESCCCTTSTTTTTTE-------------------------EEEEEECCCCCC-----------
T ss_pred hhcccCCCCCCcEEEEECCCCCCCChHHcccc-------------------------cccCcccccCCC-----------
Confidence 47888999999999999999999999998640 010111110000
Q ss_pred CCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhc-
Q 040503 214 IPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHD- 292 (767)
Q Consensus 214 ~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~- 292 (767)
.......+.|..||||||||||+|+. .||||+|+|+.+|++++.+ .++.+++++||+|+++.
T Consensus 61 g~~f~~~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G---~g~~s~ii~ai~~a~~~~ 123 (546)
T 2qtw_B 61 GTRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQG---KGTVSGTLIGLEFIRKSQ 123 (546)
T ss_dssp -------CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS---EEEHHHHHHHHHHHHHHH
T ss_pred CccccCCCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCC---CcCHHHHHHHHHHHHHhh
Confidence 00001245688999999999999874 6899999999999998776 47789999999999974
Q ss_pred -----CCcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCC-cccCCCceEEeccccCcceeeeeEEe
Q 040503 293 -----GVDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGS-VENVAPWILTVGASTTDREFTSYVTL 366 (767)
Q Consensus 293 -----gvdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgA~~~~~~~~~~~~~ 366 (767)
+++|||||||+. ....+..++.++.++|++||+||||+|.+... .++..|++|+|||++.+...
T Consensus 124 ~~~~~g~~VINmSlGg~----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~------ 193 (546)
T 2qtw_B 124 LVQPVGPLVVLLPLAGG----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP------ 193 (546)
T ss_dssp HHSCCSCEEEEECEEEE----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB------
T ss_pred hhccCCCeEEEecCCCC----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc------
Confidence 899999999975 34677888889999999999999999976433 34567999999997643200
Q ss_pred cCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcCce
Q 040503 367 GNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAGAV 446 (767)
Q Consensus 367 ~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G~~ 446 (767)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCccc
Q 040503 447 GMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAIFK 526 (767)
Q Consensus 447 g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~K 526 (767)
...-..||++||.+
T Consensus 194 -----------------------------------------------------------a~~s~~fSn~G~~v------- 207 (546)
T 2qtw_B 194 -----------------------------------------------------------VTLGTLGTNFGRCV------- 207 (546)
T ss_dssp -----------------------------------------------------------CEETTEECCBSTTC-------
T ss_pred -----------------------------------------------------------ccccCCcCCCCCcc-------
Confidence 00001289999854
Q ss_pred ceEEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccc
Q 040503 527 PDVTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTARAE 601 (767)
Q Consensus 527 PDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~ 601 (767)
||+|||++|+++++... ..|..++|||||||||||++|||+|++|+|+|+|||++|++||.+.
T Consensus 208 -DI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~ 270 (546)
T 2qtw_B 208 -DLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 270 (546)
T ss_dssp -CEEEECSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEES
T ss_pred -eEEecCccEEeeccCCC-----------CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 99999999999987632 2799999999999999999999999999999999999999999764
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=6.3e-46 Score=391.47 Aligned_cols=230 Identities=27% Similarity=0.374 Sum_probs=196.6
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
..+|+.. +|+||+|||||||||++||+|.++ +...+.|..
T Consensus 23 ~~~~~~~-~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~------------- 62 (279)
T 3f7m_A 23 AYAYDTS-AGAGACVYVIDTGVEDTHPDFEGR--------------------------AKQIKSYAS------------- 62 (279)
T ss_dssp SEEECTT-TTTTEEEEEEESCCCTTCGGGTTC--------------------------EEEEEECSS-------------
T ss_pred ceeecCC-CCCCCEEEEEcCCCCCCChhhccc--------------------------cccccCCCC-------------
Confidence 3567766 999999999999999999999754 333333322
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhhc
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIHD 292 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~~ 292 (767)
...|..||||||||||+|+. .||||+|+|+.+|+++..+ .+..++++++|+|++++
T Consensus 63 -------~~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~---~~~~~~~~~ai~~~~~~ 118 (279)
T 3f7m_A 63 -------TARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSG---SGSLSNIIAGMDFVASD 118 (279)
T ss_dssp -------SSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS---CCCHHHHHHHHHHHHHH
T ss_pred -------CCCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCC---CcCHHHHHHHHHHHHhc
Confidence 12278999999999999873 6999999999999998776 47889999999999988
Q ss_pred C-------CcEEEeccCCCCccCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCc-ccCCCceEEeccccCcceeeeeE
Q 040503 293 G-------VDVISASLGSIAREHLKNTIAIGSFHAMMNGIVSVAAAGNSGPDDGSV-ENVAPWILTVGASTTDREFTSYV 364 (767)
Q Consensus 293 g-------vdVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~-~~~~p~vitVgA~~~~~~~~~~~ 364 (767)
+ ++|||||||.. ....+..++.++.++|++||+||||+|...... ++..+++|+|||++.
T Consensus 119 ~~~~~~~~~~Vin~S~g~~----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~-------- 186 (279)
T 3f7m_A 119 RQSRNCPRRTVASMSLGGG----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS-------- 186 (279)
T ss_dssp GGGSCCTTEEEEEECCCEE----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT--------
T ss_pred cccccCCCCeEEEeCCCcC----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC--------
Confidence 6 99999999965 456788888899999999999999999764433 456799999999543
Q ss_pred EecCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCccceEEEEecCCchhHHHHHHHHcC
Q 040503 365 TLGNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQGKILICYGARYGDEKGQWAAQAG 444 (767)
Q Consensus 365 ~~~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~G 444 (767)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceeeccCCCCceecccCCCCCCCCCCc
Q 040503 445 AVGMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEFNTRPSRMMAFFTSRGPNMIDPAI 524 (767)
Q Consensus 445 ~~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~ 524 (767)
.+.++.||++||..
T Consensus 187 -------------------------------------------------------------~~~~~~~S~~g~~~----- 200 (279)
T 3f7m_A 187 -------------------------------------------------------------NDVRSTFSNYGRVV----- 200 (279)
T ss_dssp -------------------------------------------------------------TSBBCTTCCBSTTC-----
T ss_pred -------------------------------------------------------------CCCCCCCCCCCCCC-----
Confidence 24678999999976
Q ss_pred ccceEEeCCCcEEEeecCCCCCCCCCCCCCccceeeecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccc
Q 040503 525 FKPDVTAPGVDIIAAFTEASGPSPDETHKRRIPYIMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTARAE 601 (767)
Q Consensus 525 ~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~ 601 (767)
||+|||++|+++++.. .|..++|||||||||||++|||+|++|. +|++||++|++||++.
T Consensus 201 ---di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~ 260 (279)
T 3f7m_A 201 ---DIFAPGTSITSTWIGG-------------RTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKN 260 (279)
T ss_dssp ---CEEEECSSEEEECGGG-------------CEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEES
T ss_pred ---eEEECCCCeEeecCCC-------------CEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhcccc
Confidence 9999999999998763 7899999999999999999999999999 9999999999999875
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=2.2e-43 Score=411.86 Aligned_cols=299 Identities=21% Similarity=0.241 Sum_probs=202.3
Q ss_pred ccccccCCCCCceEEEEecccCCCCCCCccCCCCCCCCCCccccccCCCCCcccCCcccceeEEcccchhhhhccCCCCC
Q 040503 133 DSAWKKARFGEDVIIANVDSGVWPESKSFADDGMGPIPSKWKGICQNDNYKGVSCNKKLIGIRYINQGTIEELRAKNPDA 212 (767)
Q Consensus 133 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (767)
..+|..+++|+||+|||||||||++||+|.++ ...+.++|..+.
T Consensus 60 ~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n-------------------------~~~~~~~~~~~~----------- 103 (600)
T 3hjr_A 60 WWAHRTGVLGQGVNVAVVDDGLAIAHPDLADN-------------------------VRPGSKNVVTGS----------- 103 (600)
T ss_dssp HHHHHHTCSCTTCEEEEESSCCCTTCTTTGGG-------------------------BCSCCBCTTTSS-----------
T ss_pred HHHHHcCCCCCCeEEEEEcCCCCCCChhHhhc-------------------------cccCcceeecCC-----------
Confidence 68999999999999999999999999999864 011222232221
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhccCCCCCccccccCCCcccccCCCCeEEEEEeecCCCCCCCCChhHHHHHH-HHhhh
Q 040503 213 VIPQNLTTGRDEEGHGTHTLATAGGNFVPNVSVYGSGYGTAKGGSPKARVAAYKVCWKPNENDSCASADILSAY-DLAIH 291 (767)
Q Consensus 213 ~~~~~~~~~~D~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai-d~a~~ 291 (767)
.+..+..|.+||||||||||||.. ++ .| +.||||+|+|+.+|++++.+ .+..++++.|+ +++..
T Consensus 104 ---~dp~p~~~~~gHGThVAGiIAa~~-n~---~g-----~~GVAp~A~l~~~rvl~~~~---~~~~~~~~~a~~~~~~~ 168 (600)
T 3hjr_A 104 ---DDPTPTDPDTAHGTSVSGIIAAVD-NA---IG-----TKGIAPRAQLQGFNLLDDNS---QQLQKDWLYALGDSNAS 168 (600)
T ss_dssp ---SCCCCCSTTCCHHHHHHHHHHCCS-SS---SS-----CCCSSTTCEEEEECTTSTTC---CCCHHHHHHHTTSSHHH
T ss_pred ---CCCCCCCCCCChHHHHHHHHhEeC-CC---CC-----cEEeCCCCEEEEEEeecCCC---CccHHHHHHHhhhhhhh
Confidence 112234467899999999999863 11 23 38999999999999998776 46677777776 66788
Q ss_pred cCCcEEEeccCCCCc--cCcc----cHHHHHHHHH--HhCCCEEEEecCCCCCCCCCc----------------------
Q 040503 292 DGVDVISASLGSIAR--EHLK----NTIAIGSFHA--MMNGIVSVAAAGNSGPDDGSV---------------------- 341 (767)
Q Consensus 292 ~gvdVIn~SlG~~~~--~~~~----~~~~~a~~~a--~~~Gi~vV~AAGN~G~~~~~~---------------------- 341 (767)
++++|||||||.... .... ..+..++..+ ..+|+++|+||||.+......
T Consensus 169 ~~~~I~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~~~d~ 248 (600)
T 3hjr_A 169 RDNRVFNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDP 248 (600)
T ss_dssp HTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBTTSSG
T ss_pred cCCCEEecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCcccccccC
Confidence 899999999997621 1111 1122222222 258999999999976321000
Q ss_pred ccCCCceEEeccccCcceeeeeEEecCceeEeeeeeeccccCCCCCceeeEeccccccccccccccCcccCCCCCCCCcc
Q 040503 342 ENVAPWILTVGASTTDREFTSYVTLGNKMVIKGASVSQKGLLNDLDSYPLIGGADARIANVSEIDASECKKGSIDPAKVQ 421 (767)
Q Consensus 342 ~~~~p~vitVgA~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 421 (767)
....+++|+|||
T Consensus 249 ~~~~~~~IsVgA-------------------------------------------------------------------- 260 (600)
T 3hjr_A 249 SNSNFWNLVVSA-------------------------------------------------------------------- 260 (600)
T ss_dssp GGGSSSEEEEEE--------------------------------------------------------------------
T ss_pred ccccCcceEEee--------------------------------------------------------------------
Confidence 001112222222
Q ss_pred ceEEEEecCCchhHHHHHHHHcCceEEEEeccCCCCcccccccccccEEEeehhhHHHHHHHHhcCCCceEEEecCceee
Q 040503 422 GKILICYGARYGDEKGQWAAQAGAVGMILVSSKESGNKVLNMVHHLPTAHLNYTDGESVYAYINSTQNPTASMTNSKTEF 501 (767)
Q Consensus 422 gkivl~~~g~~~~~~~~~~~~~G~~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~ 501 (767)
T Consensus 261 -------------------------------------------------------------------------------- 260 (600)
T 3hjr_A 261 -------------------------------------------------------------------------------- 260 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCceecccCCCCCCCCCCcccceEEeCCCcE-------E-EeecCCCCCC-------------CCCCCCCccceee
Q 040503 502 NTRPSRMMAFFTSRGPNMIDPAIFKPDVTAPGVDI-------I-AAFTEASGPS-------------PDETHKRRIPYIM 560 (767)
Q Consensus 502 ~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I-------~-sa~~~~~~~~-------------~~~~~~~~~~y~~ 560 (767)
....+.++.||++|+.. +++|||.++ . ...++..... ..........|..
T Consensus 261 -~~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (600)
T 3hjr_A 261 -LNADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGV 331 (600)
T ss_dssp -ECTTSSBCTTCCBCTTC--------CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEE
T ss_pred -ecCCCCEeecccCCcce--------eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceec
Confidence 22346889999999988 999999763 2 2222111000 0011122346889
Q ss_pred ecccccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhccccccCCCCcccC-------------------CCCCCCCCCCc
Q 040503 561 MSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTARAEDSSNRPILD-------------------QNTGEKATPFA 621 (767)
Q Consensus 561 ~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~g~~~~~-------------------~~~~~~~~~~~ 621 (767)
++|||||||||||++|||+|+||+||++|||++|++||++++....|+.. .......-...
T Consensus 332 ~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~ 411 (600)
T 3hjr_A 332 MNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPT 411 (600)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTT
T ss_pred cccccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCceEccc
Confidence 99999999999999999999999999999999999999999876655321 01112223457
Q ss_pred cCCCccCccCcCCCCccc
Q 040503 622 YGAGHVNPNSALDPGLVY 639 (767)
Q Consensus 622 ~G~G~vd~~~A~~~glv~ 639 (767)
||+|+||+.+|++....+
T Consensus 412 yGfG~vDA~~aV~~A~~w 429 (600)
T 3hjr_A 412 YGFGLIDVNKALELAANH 429 (600)
T ss_dssp TBTCBCCHHHHHHHHTTC
T ss_pred cCCceecHHHHHHHhhcC
Confidence 999999999999754443
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.91 E-value=8.6e-25 Score=248.84 Aligned_cols=98 Identities=26% Similarity=0.352 Sum_probs=77.6
Q ss_pred cccccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhh---cCCcEEEeccCCCCccC---cccHHHHHHHHHHhCCC
Q 040503 252 TAKGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIH---DGVDVISASLGSIAREH---LKNTIAIGSFHAMMNGI 325 (767)
Q Consensus 252 ~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~---~gvdVIn~SlG~~~~~~---~~~~~~~a~~~a~~~Gi 325 (767)
.+.||||+|+|+.|++. ...++++++|+||++ ++++|||||||...... +...+..++.+|..+||
T Consensus 273 ~~~gvAp~a~i~~~~~~--------~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi 344 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAP--------NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGV 344 (552)
T ss_dssp HHHHHCTTSEEEEEECC--------SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTC
T ss_pred hhhccCCCCeEEEEEcC--------CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCe
Confidence 34899999999999973 345789999999998 78999999999874221 23456677778889999
Q ss_pred EEEEecCCCCCCC--------CCcccCCCceEEeccccCc
Q 040503 326 VSVAAAGNSGPDD--------GSVENVAPWILTVGASTTD 357 (767)
Q Consensus 326 ~vV~AAGN~G~~~--------~~~~~~~p~vitVgA~~~~ 357 (767)
+||+||||+|... ...++.+|+|++||+++..
T Consensus 345 ~vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~~ 384 (552)
T 1t1e_A 345 TVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLV 384 (552)
T ss_dssp EEEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEE
T ss_pred EEEEecCCCCCCCCCCCCcccccCcccCCCEEEEeccccc
Confidence 9999999999653 2334567999999998653
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.86 E-value=5.3e-22 Score=215.30 Aligned_cols=100 Identities=16% Similarity=0.171 Sum_probs=79.8
Q ss_pred cccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhhh-cCCcEEEeccCCCCcc----CcccHHHHHHHHHHhCCCEEE
Q 040503 254 KGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAIH-DGVDVISASLGSIARE----HLKNTIAIGSFHAMMNGIVSV 328 (767)
Q Consensus 254 ~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~~-~gvdVIn~SlG~~~~~----~~~~~~~~a~~~a~~~Gi~vV 328 (767)
..+||+++++.|++.+... +..++++++|+||++ ++++|||||||..... .+...+..++.+|..+||+||
T Consensus 90 g~~aP~a~~~~~~~~~~~~----~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv 165 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSA----SGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFS 165 (372)
T ss_dssp HHTTSCEEEEEEEEECTTS----STTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEE
T ss_pred hhcCCCCcEEEEEeCCCCC----cccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEE
Confidence 3468999999999986543 678899999999998 8999999999986311 223467777778889999999
Q ss_pred EecCCCCCCCC-------------CcccCCCceEEeccccCc
Q 040503 329 AAAGNSGPDDG-------------SVENVAPWILTVGASTTD 357 (767)
Q Consensus 329 ~AAGN~G~~~~-------------~~~~~~p~vitVgA~~~~ 357 (767)
+||||+|...+ ..++.+|+|++||+++..
T Consensus 166 ~AsGd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 166 VSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp EECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred EEECCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 99999997542 233567999999998653
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.01 E-value=3.5e-10 Score=127.73 Aligned_cols=98 Identities=16% Similarity=0.159 Sum_probs=63.4
Q ss_pred cccCCCCeEEEEEeecCCCCCCCCChhHHHHHHHHhh--hcCCcEEEeccCCCCcc---CcccHHHHHHHHHHhCCCEEE
Q 040503 254 KGGSPKARVAAYKVCWKPNENDSCASADILSAYDLAI--HDGVDVISASLGSIARE---HLKNTIAIGSFHAMMNGIVSV 328 (767)
Q Consensus 254 ~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~aid~a~--~~gvdVIn~SlG~~~~~---~~~~~~~~a~~~a~~~Gi~vV 328 (767)
.+++++..++.|..-... ...+.++..+++.. .+-++|||+|||..... .+...+...+.++..+||.|+
T Consensus 262 ~a~~~~i~~~~~~~~g~~-----~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~ 336 (544)
T 3edy_A 262 MSAGANISTWVYSSPGRH-----EGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLL 336 (544)
T ss_dssp HHHSTTSEEEEECCCSCC-----TTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hccCCCceEEEEecCCcc-----cccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEE
Confidence 455666666655432111 12334555454433 34589999999987422 122445566677889999999
Q ss_pred EecCCCCCCCC----------CcccCCCceEEeccccC
Q 040503 329 AAAGNSGPDDG----------SVENVAPWILTVGASTT 356 (767)
Q Consensus 329 ~AAGN~G~~~~----------~~~~~~p~vitVgA~~~ 356 (767)
+|+||+|.... ..++.+|||++||+++.
T Consensus 337 ~ASGD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 337 FASGDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp EECCSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred EecCCCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 99999996431 33456899999999764
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.96 E-value=6.9e-10 Score=98.94 Aligned_cols=78 Identities=18% Similarity=0.164 Sum_probs=66.1
Q ss_pred CCCCEEEEeCCCCCCCCCCCCChhHHHHHHHHHHHHHhCCccccccceEEEEcceeeeEEEEcCHHHHHHhhCCCCeEEE
Q 040503 26 AKKPYVVYLGSHSHGSNPTSDDIDRARIRHHEFLGSFLGSVEEAESSIFHSYGRFINGFGAVLEEEHAKQLENHPGVVSV 105 (767)
Q Consensus 26 ~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~~~~~~~~~~~~l~~~~~V~~v 105 (767)
.+++|||+|++... ......|++|+.+++.+ +....++.++|++.|+||+++++++++++|+++|+|.+|
T Consensus 36 ip~~YIV~lk~~~~---------~~~~~~h~~~l~s~~~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~V 105 (114)
T 2w2n_P 36 LPGTYVVVLKEETH---------LSQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYI 105 (114)
T ss_dssp EEEEEEEEECTTCC---------HHHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEE
T ss_pred CCCcEEEEECCCCC---------HHHHHHHHHHHHHHhhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEE
Confidence 46789999998664 24556888999988764 334678999999999999999999999999999999999
Q ss_pred EeCccccc
Q 040503 106 FPDEGAKL 113 (767)
Q Consensus 106 ~~~~~~~~ 113 (767)
|+|+.++.
T Consensus 106 E~D~~v~~ 113 (114)
T 2w2n_P 106 EEDSSVFA 113 (114)
T ss_dssp EEEEEEEE
T ss_pred EeCceEec
Confidence 99998764
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.82 E-value=1.3e-08 Score=84.87 Aligned_cols=74 Identities=16% Similarity=0.249 Sum_probs=57.2
Q ss_pred CCCCCEEEEeCCCCCCCCCCCCChhHHHHHHHHHHHHHhCCccccccceEEEEcceeeeEEEEcCHHHHHHhhCCCCeEE
Q 040503 25 AAKKPYVVYLGSHSHGSNPTSDDIDRARIRHHEFLGSFLGSVEEAESSIFHSYGRFINGFGAVLEEEHAKQLENHPGVVS 104 (767)
Q Consensus 25 ~~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~~~~~~~~~~~~l~~~~~V~~ 104 (767)
..+++|||+||++... ... +.++++ ....++.++|++ |+||+++++++++++|+++|+|.+
T Consensus 6 ~i~~~YIV~~k~~~~~--------~~~---~~~~~~-------~~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~ 66 (80)
T 3cnq_P 6 NGEKKYIVGFKQGFKS--------CAK---KEDVIS-------EKGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAY 66 (80)
T ss_dssp --CCEEEEEECTTCCS--------HHH---HHHHHH-------TTTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEE
T ss_pred cCCCCEEEEECCCCCh--------HHH---HHHHHH-------HcCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccE
Confidence 3568999999987653 111 222222 124689999998 999999999999999999999999
Q ss_pred EEeCcccccCccC
Q 040503 105 VFPDEGAKLHTTR 117 (767)
Q Consensus 105 v~~~~~~~~~~~~ 117 (767)
||+|+.++++++.
T Consensus 67 Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 67 VEEDKLYRALSAT 79 (80)
T ss_dssp EEECCEEEECCC-
T ss_pred EEeCcEEEEeeec
Confidence 9999999988764
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.65 E-value=3e-08 Score=89.32 Aligned_cols=78 Identities=18% Similarity=0.162 Sum_probs=60.9
Q ss_pred CCCCEEEEeCCCCCCCCCCCCChhHHHHHHHHHHHHHhCCccccccceEEEEcceeeeEEEEcCHHHHHHhhCCCCeEEE
Q 040503 26 AKKPYVVYLGSHSHGSNPTSDDIDRARIRHHEFLGSFLGSVEEAESSIFHSYGRFINGFGAVLEEEHAKQLENHPGVVSV 105 (767)
Q Consensus 26 ~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~~~~~~~~~~~~l~~~~~V~~v 105 (767)
.+++|||+||+.... .....|.+++..+..+ +....++.++|++.|+||+++++++++++|+++|+|.+|
T Consensus 46 Ip~~YIV~~K~~~~~---------~~~~~~~~~l~~~~~~-r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~V 115 (124)
T 2qtw_A 46 LPGTYVVVLKEETHL---------SQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYI 115 (124)
T ss_dssp EEEEEEEEECTTCCH---------HHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEE
T ss_pred CCCCEEEEECCCCCH---------HHHHHHHHHHHHHHhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEE
Confidence 357899999997652 3445555566554321 113468999999999999999999999999999999999
Q ss_pred EeCccccc
Q 040503 106 FPDEGAKL 113 (767)
Q Consensus 106 ~~~~~~~~ 113 (767)
++|+.++.
T Consensus 116 E~D~~v~a 123 (124)
T 2qtw_A 116 EEDSSVFA 123 (124)
T ss_dssp EEEEEEEE
T ss_pred EeCceEec
Confidence 99988764
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.57 E-value=1.6e-07 Score=77.14 Aligned_cols=70 Identities=13% Similarity=0.149 Sum_probs=57.7
Q ss_pred CCEEEEeCCCCCCCCCCCCChhHHHHHHHHHHHHHhCCccccccceEEEEc-ceeeeEEEEcCHHHHHHhhCC--CCeEE
Q 040503 28 KPYVVYLGSHSHGSNPTSDDIDRARIRHHEFLGSFLGSVEEAESSIFHSYG-RFINGFGAVLEEEHAKQLENH--PGVVS 104 (767)
Q Consensus 28 ~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~-~~~~g~~~~~~~~~~~~l~~~--~~V~~ 104 (767)
+.|||+||+... ......|.+++... ...+.+.|+ ..|+||+++++++.+++|+++ |.|.+
T Consensus 3 ~sYIV~lk~~~~---------~~~~~~~~~~~~~~-------gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~ 66 (76)
T 1v5i_B 3 GKFIVIFKNDVS---------EDKIRETKDEVIAE-------GGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDS 66 (76)
T ss_dssp EEEEEEECTTCC---------HHHHHHHHHHHHHH-------TCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEE
T ss_pred ceEEEEECCCCC---------HHHHHHHHHHHHhh-------CCceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcE
Confidence 589999999765 24456666666654 247889994 799999999999999999999 89999
Q ss_pred EEeCccccc
Q 040503 105 VFPDEGAKL 113 (767)
Q Consensus 105 v~~~~~~~~ 113 (767)
||+|+.+++
T Consensus 67 VE~D~~v~~ 75 (76)
T 1v5i_B 67 IEEDHVAHA 75 (76)
T ss_dssp EEECCEEEC
T ss_pred EcCCcEEeC
Confidence 999998754
No 42
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.23 E-value=5e-06 Score=80.38 Aligned_cols=92 Identities=12% Similarity=0.095 Sum_probs=72.9
Q ss_pred ccCcccCCCCCCCC-------ccceEEEEecCC--chhHHHHHHHHcCceEEEEeccCCCCccc--c--cccccccEEEe
Q 040503 406 DASECKKGSIDPAK-------VQGKILICYGAR--YGDEKGQWAAQAGAVGMILVSSKESGNKV--L--NMVHHLPTAHL 472 (767)
Q Consensus 406 ~~~~c~~~~~~~~~-------~~gkivl~~~g~--~~~~~~~~~~~~G~~g~i~~~~~~~~~~~--~--~~~~~~p~~~i 472 (767)
....|.+..+.... .+|||+|+.||. .|.+|..+++++||.++|+||+...+... . .....||+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 46789987653222 478999999997 89999999999999999999985322211 1 12247999999
Q ss_pred ehhhHHHHHHHHhcCCCceEEEecC
Q 040503 473 NYTDGESVYAYINSTQNPTASMTNS 497 (767)
Q Consensus 473 ~~~~g~~l~~~~~~~~~~~~~i~~~ 497 (767)
+..+|+.|++++..+...+++|...
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg 186 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVG 186 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECC
Confidence 9999999999999998888887654
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.32 E-value=0.00031 Score=55.40 Aligned_cols=45 Identities=20% Similarity=0.177 Sum_probs=40.5
Q ss_pred cccccceEEEEcceeeeEEEEcCHHHHHHhhCCCCeEEEEeCcccc
Q 040503 67 EEAESSIFHSYGRFINGFGAVLEEEHAKQLENHPGVVSVFPDEGAK 112 (767)
Q Consensus 67 ~~~~~~i~~~y~~~~~g~~~~~~~~~~~~l~~~~~V~~v~~~~~~~ 112 (767)
+..+.++.+.|. .+++++++++++.++.|+++|+|++|++|...+
T Consensus 19 ~~~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 19 LGIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp GGGTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred HHCCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 344679999998 899999999999999999999999999998764
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=94.91 E-value=0.07 Score=58.51 Aligned_cols=71 Identities=15% Similarity=0.221 Sum_probs=57.3
Q ss_pred CCCCCccceEEEEecCC-chhHHHHHHHHcCceEEEEeccCCCCcc--cc-cccccccEEEeehhhHHHHHHHHh
Q 040503 415 IDPAKVQGKILICYGAR-YGDEKGQWAAQAGAVGMILVSSKESGNK--VL-NMVHHLPTAHLNYTDGESVYAYIN 485 (767)
Q Consensus 415 ~~~~~~~gkivl~~~g~-~~~~~~~~~~~~G~~g~i~~~~~~~~~~--~~-~~~~~~p~~~i~~~~g~~l~~~~~ 485 (767)
+...+++|||+|+.++. .+..|..+++++||.|+|++++...... .. .....+|...|+..+++.|+.++.
T Consensus 108 ~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 108 VAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred cCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 33447999999999999 7999999999999999999998642211 11 134578999999999999999984
No 45
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=93.41 E-value=0.23 Score=54.70 Aligned_cols=80 Identities=20% Similarity=0.248 Sum_probs=58.4
Q ss_pred CCCccceEEEEecCC-c---------hhHH----HHHHHHcCceEEEEeccCCCCcc--------cccccccccEEEeeh
Q 040503 417 PAKVQGKILICYGAR-Y---------GDEK----GQWAAQAGAVGMILVSSKESGNK--------VLNMVHHLPTAHLNY 474 (767)
Q Consensus 417 ~~~~~gkivl~~~g~-~---------~~~~----~~~~~~~G~~g~i~~~~~~~~~~--------~~~~~~~~p~~~i~~ 474 (767)
+.+++|||||+.++. . +..| ..+++++||.|+|++++...... .......+|++.|+.
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 468999999999865 2 2333 34689999999999987542211 111235799999999
Q ss_pred hhHHHHHHHHhcCCCceEEEec
Q 040503 475 TDGESVYAYINSTQNPTASMTN 496 (767)
Q Consensus 475 ~~g~~l~~~~~~~~~~~~~i~~ 496 (767)
.+++.|+..+..+...++++..
T Consensus 204 ~da~~L~~~l~~g~~~~v~l~~ 225 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISLEL 225 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEE
Confidence 9999999999887666666543
No 46
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.32 E-value=0.2 Score=44.52 Aligned_cols=50 Identities=24% Similarity=0.366 Sum_probs=43.4
Q ss_pred ceEEEEEEEEecCCCCceEEEEEecCCCceEEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 692 GTITFTRKVKNVGAANSTYKARTSEITGVSTIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
.+.+.++.|+|+|+.+..|+.....| .+++|...++ ++|+++.++|+|.+
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~~~----F~i~P~~g~L-~pg~~~~i~V~F~P 90 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTCRP----FSIEPAIGTL-NVGESMQLEVEFEP 90 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECCTT----EEEESSEEEE-CTTCEEEEEEEECC
T ss_pred CeEEEEEEEEECCCCCEEEEEecCCC----eEEECCcCEE-CCCCEEEEEEEEEc
Confidence 57888899999999888888776543 7788999999 78999999999999
No 47
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=92.08 E-value=0.18 Score=58.03 Aligned_cols=68 Identities=16% Similarity=0.244 Sum_probs=53.4
Q ss_pred CCccceEEEEecCC-chhHHHHHHHHcCceEEEEeccCCCCc------------------cccc----------------
Q 040503 418 AKVQGKILICYGAR-YGDEKGQWAAQAGAVGMILVSSKESGN------------------KVLN---------------- 462 (767)
Q Consensus 418 ~~~~gkivl~~~g~-~~~~~~~~~~~~G~~g~i~~~~~~~~~------------------~~~~---------------- 462 (767)
-+++|||+|+.+|. .+..|..+++++||.|+|++++..... ...+
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 47999999999999 899999999999999999999753210 0000
Q ss_pred ccccccEEEeehhhHHHHHHHHh
Q 040503 463 MVHHLPTAHLNYTDGESVYAYIN 485 (767)
Q Consensus 463 ~~~~~p~~~i~~~~g~~l~~~~~ 485 (767)
....||+..|+..+++.|+..+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 02368999999999999987554
No 48
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=91.70 E-value=0.28 Score=56.96 Aligned_cols=69 Identities=28% Similarity=0.483 Sum_probs=54.4
Q ss_pred CCccceEEEEecCC-chhHHHHHHHHcCceEEEEeccCC-----C--------------------------Cccccc---
Q 040503 418 AKVQGKILICYGAR-YGDEKGQWAAQAGAVGMILVSSKE-----S--------------------------GNKVLN--- 462 (767)
Q Consensus 418 ~~~~gkivl~~~g~-~~~~~~~~~~~~G~~g~i~~~~~~-----~--------------------------~~~~~~--- 462 (767)
.+++|||+|+.+|. .+.+|..+++++||.|+|+|++.. + |+...+
T Consensus 151 ~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~p 230 (707)
T 3fed_A 151 INCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGYP 230 (707)
T ss_dssp CCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTSC
T ss_pred CCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCCc
Confidence 46999999999999 899999999999999999998621 0 110000
Q ss_pred --------------ccccccEEEeehhhHHHHHHHHhc
Q 040503 463 --------------MVHHLPTAHLNYTDGESVYAYINS 486 (767)
Q Consensus 463 --------------~~~~~p~~~i~~~~g~~l~~~~~~ 486 (767)
....||++.|+..+++.|+..+..
T Consensus 231 s~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 231 AKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred ccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 024689999999999999987754
No 49
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=87.14 E-value=0.26 Score=60.52 Aligned_cols=24 Identities=42% Similarity=0.490 Sum_probs=22.6
Q ss_pred CCCCCceEEEEecccCCCCCCCcc
Q 040503 139 ARFGEDVIIANVDSGVWPESKSFA 162 (767)
Q Consensus 139 ~~~G~gV~VgVIDtGid~~Hp~f~ 162 (767)
.+.|+||+|||+|||||+.+|.|.
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCccEEEEEeCCCCCCCCcce
Confidence 579999999999999999999995
No 50
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=86.93 E-value=0.42 Score=52.57 Aligned_cols=33 Identities=18% Similarity=0.312 Sum_probs=27.9
Q ss_pred ccCCCCceecccCCCCCCCCCCcccceEEeCCCcEEEeecC
Q 040503 502 NTRPSRMMAFFTSRGPNMIDPAIFKPDVTAPGVDIIAAFTE 542 (767)
Q Consensus 502 ~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~ 542 (767)
.....+.++.||++||.. ||+|||++|+++++.
T Consensus 179 A~~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 179 AVDSNLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp EECTTCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred EECCCCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 344457899999999876 999999999999874
No 51
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=83.96 E-value=4.5 Score=36.59 Aligned_cols=54 Identities=11% Similarity=-0.048 Sum_probs=42.8
Q ss_pred ceEEEEEEEEecCCCCceEEEEEecC----CCceEEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 692 GTITFTRKVKNVGAANSTYKARTSEI----TGVSTIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~~~~~p----~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
...+-+.+|+|.|..+.+|.+..... ..--++++|..-++ .+|+++++.|++.+
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYV 100 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECB
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEE
Confidence 35667788999999999999975321 12247788999888 88999999999986
No 52
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.45 E-value=1.3 Score=38.13 Aligned_cols=54 Identities=11% Similarity=0.213 Sum_probs=42.5
Q ss_pred ceEEEEEEEEecCCCCceEEEEEec-CCCceEEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 692 GTITFTRKVKNVGAANSTYKARTSE-ITGVSTIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~~~~~-p~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
...+.+.+++|.|+.+..|+..... +.+...+++|..-.+ .+|++++++|+|.+
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~ 80 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSS 80 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECC
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEEC
Confidence 4677788999999999999984311 113347788999888 78999999999998
No 53
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=77.28 E-value=8.4 Score=33.53 Aligned_cols=52 Identities=19% Similarity=0.210 Sum_probs=42.8
Q ss_pred eEEEEEEEEecCCCCceEEEEEecCCCceEEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 693 TITFTRKVKNVGAANSTYKARTSEITGVSTIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 693 ~~t~~rtvtnv~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
.-.++..|.|....+.+|.++++.++|+++. .|..+++ ++++..++.|.+..
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~ 83 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGA 83 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEE
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEE
Confidence 5678888999999999999999887776654 2556778 78999999999887
No 54
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=61.32 E-value=25 Score=37.17 Aligned_cols=54 Identities=11% Similarity=-0.025 Sum_probs=43.6
Q ss_pred ceEEEEEEEEecCCCCceEEEEEecCCCce----EEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 692 GTITFTRKVKNVGAANSTYKARTSEITGVS----TIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~~~~~p~g~~----v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
...+-+.+|+|.|....+|.+......... ++++|..-++ .+|+++++.|++.+
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v 103 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYV 103 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECB
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEE
Confidence 466777889999999999999654332222 8889999888 88999999999988
No 55
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=48.60 E-value=61 Score=28.50 Aligned_cols=52 Identities=21% Similarity=0.228 Sum_probs=35.2
Q ss_pred CceEEEEEEEEecCCCC-ceEEEEEecCCCceEEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 691 NGTITFTRKVKNVGAAN-STYKARTSEITGVSTIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 691 ~~~~t~~rtvtnv~~~~-~ty~~~~~~p~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
+...+++.+|+|.|..+ ..|++.+-. .|-.+.-. ...+ .+|++++++++..+
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEECC
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEEc
Confidence 36899999999999754 777777644 34444332 2345 67888887777654
No 56
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=47.30 E-value=1.1e+02 Score=26.37 Aligned_cols=49 Identities=10% Similarity=0.065 Sum_probs=40.0
Q ss_pred EEEEEEEecCCCCceEEEEEecCCCceEEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 695 TFTRKVKNVGAANSTYKARTSEITGVSTIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 695 t~~rtvtnv~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
+.+.+|+|.++....|.+....|.- ..|.|..=.+ .+|++.++.|+..+
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~--YrVrP~~G~I-~Pg~~~~I~I~~q~ 74 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEH--YRVRPVYGFV-DAKGKSKLDINRLP 74 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTT--EEEECSEEEE-CTTCEEEEEEEECS
T ss_pred EEEEEEECCCCCeEEEEEEecCCCc--eEEcCCceEE-CCCCeEEEEEEeCC
Confidence 5678889999999999999888866 5566776655 78999999998876
No 57
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=46.78 E-value=54 Score=28.71 Aligned_cols=52 Identities=19% Similarity=0.181 Sum_probs=43.5
Q ss_pred ceEEEEEEEEecCCCCceEEEEEecCCCceEEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 692 GTITFTRKVKNVGAANSTYKARTSEITGVSTIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
...+-..+|+|.++..-.|.+...+|.- ..|.|..=.+ .++++..+.|++.+
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~~--y~VrP~~G~i-~P~~s~~v~V~~~~ 78 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGVI-DPGSIVTVSVMLQP 78 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGGG--EEEESCEEEE-CTTCEEEEEEEECC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCCc--eEEeCCCcEE-CCCCeEEEEEEECc
Confidence 4567788999999999999999998865 6667887656 88999999999987
No 58
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=46.33 E-value=58 Score=37.66 Aligned_cols=54 Identities=17% Similarity=0.139 Sum_probs=35.3
Q ss_pred ceEEEEEEEEecCCCCceEEEE--EecCCCc-----eEEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 692 GTITFTRKVKNVGAANSTYKAR--TSEITGV-----STIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~~--~~~p~g~-----~v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
...+++.+|||+|+....-.+. +..|.+. +--+--.++.+ ++||++++++++..
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~~ 673 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNL-TPGQSGTATFNIRR 673 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEE-CTTCEEEEEEEEEG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhccccee-CCCCeEEEEEEEcH
Confidence 4678999999999876555543 3444321 11111234456 78999999999987
No 59
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=43.63 E-value=17 Score=27.39 Aligned_cols=34 Identities=15% Similarity=0.181 Sum_probs=26.9
Q ss_pred ccchhhHHHHHHHHHHhCCCCCHHHHHHHHHhcc
Q 040503 565 SMSCPHVAGIVGLVKTLHPDWSPAAIKSAIMTTA 598 (767)
Q Consensus 565 SmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA 598 (767)
|-..|..--.+..|++.+|+++...|+..|...=
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~ 36 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQR 36 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTT
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcC
Confidence 4444455566788999999999999999998764
No 60
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=42.90 E-value=57 Score=28.57 Aligned_cols=51 Identities=18% Similarity=0.247 Sum_probs=42.3
Q ss_pred eEEEEEEEEecCCCCceEEEEEecCCCceEEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 693 TITFTRKVKNVGAANSTYKARTSEITGVSTIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 693 ~~t~~rtvtnv~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
..+-..+|+|.++..-.|.+...+|.- ..|.|..=.+ .++++..+.|++.+
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~--y~VrP~~Gii-~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRR--LSVDPPCGVL-DPKEKVLMAVSCDT 76 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTT--EEEESCEEEE-CTTCEEEEEEEECC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCc--EEEECCCeEE-CCCCEEEEEEEecC
Confidence 455678899999999999999999976 5667887766 78999999998877
No 61
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=41.14 E-value=6.9 Score=34.18 Aligned_cols=52 Identities=12% Similarity=0.157 Sum_probs=32.9
Q ss_pred EEEEEEEecCCCCceEEEEEe-cCCCceEEEEcCEEEEe-eCCcEEEEEEEEEE
Q 040503 695 TFTRKVKNVGAANSTYKARTS-EITGVSTIVEPSILNFT-KYGEEKTFKVAFSV 746 (767)
Q Consensus 695 t~~rtvtnv~~~~~ty~~~~~-~p~g~~v~v~p~~~~~~-~~~~~~~~~v~~~~ 746 (767)
.+...+++.+.+..+..+.++ .|.|+++++.|.++++. ....+++|.|++..
T Consensus 56 ~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~ 109 (119)
T 2kq1_A 56 EVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEM 109 (119)
T ss_dssp EEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCC
T ss_pred EEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEE
Confidence 344445555532223333455 68899999999987775 44567777777665
No 62
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=40.83 E-value=71 Score=28.96 Aligned_cols=51 Identities=20% Similarity=0.075 Sum_probs=42.7
Q ss_pred eEEEEEEEEecCCCCceEEEEEecCCCceEEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 693 TITFTRKVKNVGAANSTYKARTSEITGVSTIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 693 ~~t~~rtvtnv~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
..+-..+|+|.++....|.+...+|.- ..|.|..=.+ .++++..+.|++..
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~V~V~lq~ 86 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHG 86 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEE-CCCCeEEEEEEecC
Confidence 445678899999999999999999965 6667887766 88999999999977
No 63
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=39.43 E-value=1.2e+02 Score=29.26 Aligned_cols=52 Identities=19% Similarity=0.233 Sum_probs=34.1
Q ss_pred ceEEEEEEEEecCCCCceEEEEEecCCCceEEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 692 GTITFTRKVKNVGAANSTYKARTSEITGVSTIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
...+.+++++|.|+.+...+- ++..-|... +++..-.+ ++||+.+++|++++
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~~-v~~scgct~-~~~~~~~i-~PGe~~~i~v~~~~ 185 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLHS-VTTRNPALT-AVPDRTEI-KPGGSTLLRIAVDP 185 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEEE-EEECSTTEE-EEESCSEE-CTTCEEEEEEEECH
T ss_pred CeEEEEEEEEECCCCCEEEEE-EEeCCCCEe-eecCCccC-CCCCEEEEEEEEec
Confidence 567788999999987765542 333334322 22333334 78999999998877
No 64
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=38.24 E-value=1.6e+02 Score=25.00 Aligned_cols=49 Identities=18% Similarity=0.173 Sum_probs=40.2
Q ss_pred EEEEEEEecCCCCceEEEEEecCCCceEEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 695 TFTRKVKNVGAANSTYKARTSEITGVSTIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 695 t~~rtvtnv~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
+-+.+|+|.++....|.+.-..|.- ..|.|..=.+ .+|++.++.|+..+
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~--y~VrP~~G~I-~P~~~~~i~I~~q~ 66 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNE--YRIAPVFGFV-DPSGSKDVVITRTA 66 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSS--EEEECSEEEE-CTTEEEEEEEEECS
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCc--eEEcCCceEE-CCCCeEEEEEEeCC
Confidence 4578889999999999999988866 5666777655 78999999998876
No 65
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=37.47 E-value=48 Score=38.48 Aligned_cols=54 Identities=13% Similarity=0.150 Sum_probs=34.1
Q ss_pred ceEEEEEEEEecCCCCceEEE--EEecCCCc-----eEEEEcCEE-EEeeCCcEEEEEEEEEE
Q 040503 692 GTITFTRKVKNVGAANSTYKA--RTSEITGV-----STIVEPSIL-NFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~--~~~~p~g~-----~v~v~p~~~-~~~~~~~~~~~~v~~~~ 746 (767)
...+++++|||+|+....-.+ -+..|.+- .--+--.++ .+ ++||++++++++..
T Consensus 615 ~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L-~pGes~~V~~~l~~ 676 (721)
T 2x41_A 615 ETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLL-NPGESEEVVLEIPV 676 (721)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCB-CTTCEEEEEEEEEG
T ss_pred CeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccC-CCCCeEEEEEEECH
Confidence 568999999999986544444 34444321 111111233 34 78999999999887
No 66
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=37.20 E-value=97 Score=36.57 Aligned_cols=45 Identities=18% Similarity=0.176 Sum_probs=35.2
Q ss_pred ceeeecccccchhhHHHHHHHHHHhCCCCC-HHHHHHHHHhccccc
Q 040503 557 PYIMMSGTSMSCPHVAGIVGLVKTLHPDWS-PAAIKSAIMTTARAE 601 (767)
Q Consensus 557 ~y~~~sGTSmAaP~VAG~aALl~q~~P~~s-p~~ik~~L~~TA~~~ 601 (767)
-...++|..++-|.+.-+-|+|...+|.-- ...|-.+|.--..|-
T Consensus 618 VVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNPS 663 (845)
T 3abz_A 618 VIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVPN 663 (845)
T ss_dssp EEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCCC
T ss_pred EEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCCC
Confidence 456778998888988888889998888765 577888887766553
No 67
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=37.03 E-value=79 Score=30.50 Aligned_cols=51 Identities=12% Similarity=0.010 Sum_probs=36.8
Q ss_pred ceEEEEEEEEecCCCCceEEEEEecCCCceEEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 692 GTITFTRKVKNVGAANSTYKARTSEITGVSTIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
...+.+++++|.|+.+.+++... .|..+++...|.. + .+|++.+++|++..
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~~~~~~--I-~PG~~g~I~vt~~~ 69 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVS-LPSFVSLDDRAFR--L-QAREPRELNLSLAV 69 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEE-CCTTEECSCCEEE--E-CSSSCEEEEEEECC
T ss_pred CcceEEEEEEeCCCCceEEEecc-CCCceEeeeCcce--e-CCCCceEEEEEEcc
Confidence 35666888999999888777643 3666555444444 4 78999999999987
No 68
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=36.09 E-value=1.3e+02 Score=29.84 Aligned_cols=65 Identities=15% Similarity=0.203 Sum_probs=42.3
Q ss_pred ceEEEEEEEEecCCCCceEEEE--Eec------CC--CceEEEEcCEEEEeeCCcEEEEEEEEEEccCCCCCceeeee
Q 040503 692 GTITFTRKVKNVGAANSTYKAR--TSE------IT--GVSTIVEPSILNFTKYGEEKTFKVAFSVKGDDKPTDYGFWR 759 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~~--~~~------p~--g~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 759 (767)
+....+++|+|.++. .|.+. ++. |. ...+.|+|..+++ .+++++.++|.......-...+-.||.
T Consensus 42 ~~k~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~~~LP~DrESlf~l 116 (257)
T 3q48_A 42 SEREVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLKAPLPTDRESLFWL 116 (257)
T ss_dssp TCSEEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECCCCCCSSSCEEEEE
T ss_pred CCcEEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECCCCCCCCceeEEEE
Confidence 345677888998754 56554 222 11 2458999999999 789999999976551112234656763
No 69
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=33.82 E-value=1.8e+02 Score=25.13 Aligned_cols=56 Identities=14% Similarity=0.122 Sum_probs=36.5
Q ss_pred CCceEEEEEEEEecCCCCce--------EEEEEecCCCceEEE---------EcCEEEEeeCCcEEEEEEEEEE
Q 040503 690 LNGTITFTRKVKNVGAANST--------YKARTSEITGVSTIV---------EPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 690 ~~~~~t~~rtvtnv~~~~~t--------y~~~~~~p~g~~v~v---------~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
.++...++.+|+|.++.+-+ |.+.+....|-.|.- -....++ ++|++++|+.++..
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~ 88 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKE 88 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESS
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCC
Confidence 34688899999999865433 344444445544441 1134566 78999999999873
No 70
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=33.33 E-value=88 Score=28.10 Aligned_cols=52 Identities=19% Similarity=0.177 Sum_probs=42.8
Q ss_pred ceEEEEEEEEecCCCCceEEEEEecCCCceEEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 692 GTITFTRKVKNVGAANSTYKARTSEITGVSTIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
..++-..+|+|.++..-.|.+...+|.- ..|.|..=.+ .++++..+.|++.+
T Consensus 31 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~v~V~l~~ 82 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGII-DPGSIVTVSVMLQP 82 (147)
T ss_dssp SCCCEEEEEECCSSSCEEEEEEESCTTS--EEEESSEEEC-CTTCEEEEEEEECC
T ss_pred ceEEEEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEE-CCCCeEEEEEEECC
Confidence 3556678899999999999999999975 5667887655 88999999999987
No 71
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=32.59 E-value=1.4e+02 Score=28.74 Aligned_cols=65 Identities=11% Similarity=0.108 Sum_probs=41.5
Q ss_pred ceEEEEEEEEecCCCCceEEEE--Eec---CC--CceEEEEcCEEEEeeCCcEEEEEEEEEEccCCCCCceeeee
Q 040503 692 GTITFTRKVKNVGAANSTYKAR--TSE---IT--GVSTIVEPSILNFTKYGEEKTFKVAFSVKGDDKPTDYGFWR 759 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~~--~~~---p~--g~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 759 (767)
+...++.+|+|.++ ..|.+. ++. .. ..-+-++|..+++ .+++++.++|.......-...+-.||.
T Consensus 26 ~~k~~sl~l~N~~~--~p~LvQswv~~~~~~~~~~~pFivtPPl~Rl-~p~~~q~lRI~~~~~~LP~DRESlf~l 97 (218)
T 4ay0_A 26 DAAGVMVSVKNTQD--YPVLIQSRIYDENKEKESEDPFVVTPPLFRL-DAKQQNSLRIAQAGGVFPRDKESLKWL 97 (218)
T ss_dssp TCSCEEEEEECCSS--SCEEEEEEEECTTSCCCSSCSEEEESSEEEE-CTTCEEEEEEEECSCCCCSSSCEEEEE
T ss_pred CCcEEEEEEEcCCC--CCEEEEEEEecCCCCccccCCEEECCCeEEe-CCCCceEEEEEecCCCCCcCcEEEEEE
Confidence 45567788899774 456554 221 11 2337899999999 789999999976541111234556663
No 72
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=28.23 E-value=2.3e+02 Score=27.23 Aligned_cols=66 Identities=12% Similarity=0.167 Sum_probs=41.5
Q ss_pred ceEEEEEEEEecCCCCceEEEEE--ecCC-----CceEEEEcCEEEEeeCCcEEEEEEEEEE--ccCCCCCceeeee
Q 040503 692 GTITFTRKVKNVGAANSTYKART--SEIT-----GVSTIVEPSILNFTKYGEEKTFKVAFSV--KGDDKPTDYGFWR 759 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~~~--~~p~-----g~~v~v~p~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~ 759 (767)
+....+.+|+|.++. ..|.+.. +... ...+.|+|..+++ .+++++.++|.... ...-...+-.||.
T Consensus 14 ~~k~~sl~l~N~~~~-~p~LvQsWi~~~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~~~~~lP~DrESlf~l 88 (218)
T 2xg5_A 14 SEKSMTLDISNDNKQ-LPYLAQAWIENENQEKIITGPVIATPPVQRL-EPGAKSMVRLSTTPDISKLPQDRESLFYF 88 (218)
T ss_dssp TSSEEEEEEEECCSS-SCEEEEEEEECTTSCEECSSSEEEECSEEEE-CTTCEEEEEEEECGGGGGSCSSSCEEEEE
T ss_pred CCCEEEEEEEcCCCC-CcEEEEEEEecCCCCccccCCEEEcCCeEEE-CCCCceEEEEEecCCCCCCCCCceEEEEE
Confidence 345667888897743 2555543 2211 2347899999999 78999999997654 1222334556663
No 73
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=27.54 E-value=1.1e+02 Score=34.26 Aligned_cols=62 Identities=15% Similarity=0.103 Sum_probs=41.6
Q ss_pred CCCeEEeecCCceEEEEEEEEecCCCCceE-EEEEecCCCceEEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 681 NYPSIAVPKLNGTITFTRKVKNVGAANSTY-KARTSEITGVSTIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 681 n~ps~~~~~~~~~~t~~rtvtnv~~~~~ty-~~~~~~p~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
..|.+++... ++.+++.+|+|-+.....- ++++..|.+.+++. ....+ ++|++.+++++|+.
T Consensus 363 ~~~~~~~~~g-~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~ 425 (601)
T 1w8o_A 363 TIPDVALEPG-QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITV 425 (601)
T ss_dssp ECCCEEECTT-CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEEC
T ss_pred cCccceecCC-ceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEec
Confidence 4577777754 6888999999965432211 34466688888776 23444 66888888777777
No 74
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=27.51 E-value=43 Score=30.61 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=28.1
Q ss_pred eeecccccchhhHHHHHHHHHHhCCCCCHHHHHHH
Q 040503 559 IMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKSA 593 (767)
Q Consensus 559 ~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~ 593 (767)
..+.|-| =|+.|-|++|||++.+-..+|++|.+.
T Consensus 77 l~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 77 MHFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp CCCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred EEEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 3444666 479999999999999999999998753
No 75
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=25.99 E-value=2.1e+02 Score=27.23 Aligned_cols=65 Identities=22% Similarity=0.292 Sum_probs=41.0
Q ss_pred ceEEEEEEEEecCCCCceEEEEE--ecC---CCceEEEEcCEEEEeeCCcEEEEEEEE-EEccCCCCCceeee
Q 040503 692 GTITFTRKVKNVGAANSTYKART--SEI---TGVSTIVEPSILNFTKYGEEKTFKVAF-SVKGDDKPTDYGFW 758 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~~~--~~p---~g~~v~v~p~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~ 758 (767)
+....+.+|+|.++. ..|.+.. +.. ...-+.|+|..+++ .+++++.++|.. .....-...+-.||
T Consensus 14 ~~k~~sl~l~N~~~~-~p~LvQsWi~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~~~~lP~DrEslf~ 84 (205)
T 1klf_A 14 GQKQVQLAVTNNDEN-STYLIQSWVENADGVKDGRFIVTPPLFAM-KGKKENTLRILDATNNQLPQDRESLFW 84 (205)
T ss_dssp TCSEEEEEEEECCSS-CCEEEEEEEEETTSCCCSSEEEESSEEEE-CSSEEEEEEEEECSCSCSCSSSCEEEE
T ss_pred CCcEEEEEEEcCCCC-CcEEEEEEEecCCCCccCCEEEcCCeEEE-CCCCceEEEEEecCCCCCCCCceEEEE
Confidence 355667888897743 2455532 221 23458899999999 789999999977 43112223455665
No 76
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=24.93 E-value=1.6e+02 Score=28.44 Aligned_cols=64 Identities=13% Similarity=0.173 Sum_probs=40.8
Q ss_pred ceEEEEEEEEecCCCCceEEEEE--ecC---CCceEEEEcCEEEEeeCCcEEEEEEEEEEccCCCCCceeee
Q 040503 692 GTITFTRKVKNVGAANSTYKART--SEI---TGVSTIVEPSILNFTKYGEEKTFKVAFSVKGDDKPTDYGFW 758 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~~~--~~p---~g~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 758 (767)
+....+++|+|.++. .|.+.. +.. ....+.++|..+++ .+++++.++|.......-...+-.||
T Consensus 26 ~~k~~sl~l~N~~~~--p~LvQsWv~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~~~lP~DrEslf~ 94 (221)
T 2co7_B 26 GTAGATLSVSNPQNY--PILVQSSVKAADKSSPAPFLVMPPLFRL-EANQQSQLRIVRTGGDMPTDRETLQW 94 (221)
T ss_dssp TSSCEEEEEECCSSS--CEEEEEEEEETTSSSBCSEEEESSEEEE-CTTCEEEEEEEECCCCCCSSSCEEEE
T ss_pred CCCEEEEEEEcCCCC--cEEEEEEEecCCCCccCCEEEeCCEEEE-CCCCceEEEEEECCCCCCCCceEEEE
Confidence 345567778898743 555543 211 23458899999999 78999999997654112223455666
No 77
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=24.78 E-value=2.2e+02 Score=27.60 Aligned_cols=65 Identities=18% Similarity=0.317 Sum_probs=39.6
Q ss_pred eEEEEEEEEecCCCCceEEEE--Eec-C---CCceEEEEcCEEEEeeCCcEEEEEEEEEEccCCCCCceeeee
Q 040503 693 TITFTRKVKNVGAANSTYKAR--TSE-I---TGVSTIVEPSILNFTKYGEEKTFKVAFSVKGDDKPTDYGFWR 759 (767)
Q Consensus 693 ~~t~~rtvtnv~~~~~ty~~~--~~~-p---~g~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 759 (767)
....+++|+|.++. ..|.+. ++. . ....+.++|..+++ .+++++.++|.......-...+-.||.
T Consensus 15 ~k~~sl~l~N~~~~-~p~LvQsWid~~~~~~~~~pfivtPPlfRl-ep~~~q~lRIi~~~~~LP~DRESlf~l 85 (224)
T 3gfu_C 15 KDALTITVTNNDKE-RTFGGQAWVDNIVEKDTRPTFVVTPSFFKV-KPNGQQTLRIIMASDHLPKDKESVYWL 85 (224)
T ss_dssp SSCEEEEEEECCSS-CCEEEEEEEEESSCCSCSCSEEEESSEEEE-CTTCEEEEEEEECSCCCCSSSCEEEEE
T ss_pred CceEEEEEEeCCCC-ccEEEEEEEecCCCCcccCCEEEcCCeEEE-CCCCceEEEEEECCCCCCCCceEEEEE
Confidence 44566778887753 244432 221 1 12348999999999 789999999976541112234556763
No 78
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=24.33 E-value=2.5e+02 Score=27.45 Aligned_cols=65 Identities=9% Similarity=0.042 Sum_probs=41.4
Q ss_pred ceEEEEEEEEecCCCCceEEEEE--ecC---CCceEEEEcCEEEEeeCCcEEEEEEEEEEccCCCCCceeeee
Q 040503 692 GTITFTRKVKNVGAANSTYKART--SEI---TGVSTIVEPSILNFTKYGEEKTFKVAFSVKGDDKPTDYGFWR 759 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~~~--~~p---~g~~v~v~p~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 759 (767)
+....+++|+|.++ ..|.+.. +.. ...-+.++|..+++ .+++++.++|.......-...+-.||.
T Consensus 36 ~~k~~sl~l~N~~~--~P~LvQsWv~~~~~~~~~pfivtPPlfRl-ep~~~q~lRIi~~~~~LP~DRESlf~l 105 (239)
T 4djm_A 36 ASSGETLTVINDQD--YPMLVQSEVLSEDQKSPAPFVVTPPLFRL-DGQQSSRLRIVRTGGEFPPDRESLQWI 105 (239)
T ss_dssp TSSCEEEEEEECSS--SCEEEEEEEECTTSSSBCSEEEESSEEEE-CTTEEEEEEEEECSCCCCSSSCEEEEE
T ss_pred CCCEEEEEEEeCCC--CcEEEEEEEEcCCCCccCCEEEcCCeEEE-CCCCceEEEEEECCCCCCCCceEEEEE
Confidence 34556778889774 3465542 211 12458999999999 789999999976541112334656763
No 79
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=23.58 E-value=2.4e+02 Score=23.58 Aligned_cols=55 Identities=7% Similarity=0.037 Sum_probs=37.7
Q ss_pred eEEeecCCceEEEEEEEEecCCCCceEEEEEecCCCceEEEEcCEEEEeeCCcEEEEEEEEEE
Q 040503 684 SIAVPKLNGTITFTRKVKNVGAANSTYKARTSEITGVSTIVEPSILNFTKYGEEKTFKVAFSV 746 (767)
Q Consensus 684 s~~~~~~~~~~t~~rtvtnv~~~~~ty~~~~~~p~g~~v~v~p~~~~~~~~~~~~~~~v~~~~ 746 (767)
-+.+.+......++++|+|-......|.-....|. .++ +.+ ...++-.|+|.+..
T Consensus 35 vlsV~F~~~~~~vTItItNe~TG~~VYs~~~s~p~--~i~-----IdL-nge~sG~Y~IeI~~ 89 (101)
T 3sd2_A 35 ILNVSFGRAKDYAIITVTNKATGEIVHSKTYHNTS--IVM-----IDM-SSCEKGEYTIHIIL 89 (101)
T ss_dssp EEEEEESSCCSCEEEEEEETTTCCEEEEEEESSCS--EEE-----EEC-TTSCSEEEEEEEEE
T ss_pred EEEEEeccCCCcEEEEEEECCCCcEEEEEeccCCc--EEE-----EEc-CCCcCceEEEEEEe
Confidence 45566666667788899998767888888776543 222 223 34458899999988
No 80
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=23.44 E-value=41 Score=30.20 Aligned_cols=33 Identities=24% Similarity=0.332 Sum_probs=28.0
Q ss_pred eeecccccchhhHHHHHHHHHHhCCCCCHHHHHH
Q 040503 559 IMMSGTSMSCPHVAGIVGLVKTLHPDWSPAAIKS 592 (767)
Q Consensus 559 ~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~ 592 (767)
..+.|-| =|+.|-|++|||.+.+-..+|++|.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4556666 47999999999999999999999864
No 81
>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4
Probab=21.02 E-value=86 Score=22.54 Aligned_cols=24 Identities=8% Similarity=0.311 Sum_probs=21.3
Q ss_pred HHHHHHHhCCCCCHHHHHHHHHhc
Q 040503 574 IVGLVKTLHPDWSPAAIKSAIMTT 597 (767)
Q Consensus 574 ~aALl~q~~P~~sp~~ik~~L~~T 597 (767)
=+.+|.+.||+.+..+||..|...
T Consensus 7 ~v~~L~EMFP~~~~~~ik~~L~~~ 30 (49)
T 1otr_A 7 KLSILMDMFPAISKSKLQVHLLEN 30 (49)
T ss_dssp HHHHHHHHCSSSCHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHc
Confidence 357889999999999999999876
No 82
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=20.34 E-value=2.6e+02 Score=26.52 Aligned_cols=66 Identities=15% Similarity=0.282 Sum_probs=40.8
Q ss_pred ceEEEEEEEEecCCCCceEEEEE--ec-C--CCceEEEEcCEEEEeeCCcEEEEEEE-EEEccCCCCCceeeee
Q 040503 692 GTITFTRKVKNVGAANSTYKART--SE-I--TGVSTIVEPSILNFTKYGEEKTFKVA-FSVKGDDKPTDYGFWR 759 (767)
Q Consensus 692 ~~~t~~rtvtnv~~~~~ty~~~~--~~-p--~g~~v~v~p~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~ 759 (767)
+....+.+|+|.++ ...|.+.. +. + ....+.|+|..+++ .+++++.++|. ......-...+-.||.
T Consensus 14 ~~k~~sl~l~N~~~-~~p~LvQsWv~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~~~~lP~DrEslf~l 85 (206)
T 1l4i_A 14 GQKQVQLAVTNNDD-KSSYLIQSWIENAEGKKDARFVITPPLFSM-QGKKENTLRIIDATNGQMPEDRESLFWV 85 (206)
T ss_dssp TCSEEEEEEEECCT-TCEEEEEEEEEETTSCBCSSEEEESSEEEE-ESSEEEEEEEEECCTTCSCSSSCEEEEE
T ss_pred CCcEEEEEEEeCCC-CccEEEEEEEecCCCCccCCEEEcCCeEEE-CCCCceEEEEEecCCCCCCCCceEEEEE
Confidence 34566788889764 24555543 21 1 12458899999999 78999999997 4321112234556663
Done!