Query 040505
Match_columns 228
No_of_seqs 159 out of 2075
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 09:07:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040505.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040505hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.6E-28 3.4E-33 202.6 20.9 163 60-228 23-186 (489)
2 PLN02971 tryptophan N-hydroxyl 100.0 1.9E-26 4.1E-31 195.2 21.3 165 60-228 54-219 (543)
3 PLN02687 flavonoid 3'-monooxyg 99.9 3.6E-26 7.8E-31 192.7 19.7 164 57-228 28-192 (517)
4 PLN00110 flavonoid 3',5'-hydro 99.9 6.3E-25 1.4E-29 184.4 20.8 163 60-228 28-190 (504)
5 PLN03112 cytochrome P450 famil 99.9 6.3E-25 1.4E-29 185.2 20.9 165 55-228 24-191 (514)
6 PTZ00404 cytochrome P450; Prov 99.9 4.8E-25 1E-29 184.5 18.7 158 60-228 26-185 (482)
7 PLN00168 Cytochrome P450; Prov 99.9 1.1E-24 2.4E-29 183.7 20.7 164 60-228 32-197 (519)
8 PLN02394 trans-cinnamate 4-mon 99.9 1.2E-24 2.7E-29 183.0 20.8 164 60-228 27-191 (503)
9 PLN03234 cytochrome P450 83B1; 99.9 1.8E-24 3.9E-29 181.8 20.7 163 60-228 25-188 (499)
10 PLN02966 cytochrome P450 83A1 99.9 1.5E-24 3.3E-29 182.3 18.4 163 60-228 26-189 (502)
11 PLN02183 ferulate 5-hydroxylas 99.9 2.9E-24 6.3E-29 181.1 19.3 159 60-228 33-192 (516)
12 PLN03018 homomethionine N-hydr 99.9 1E-23 2.2E-28 177.9 21.3 167 58-228 35-202 (534)
13 PLN02196 abscisic acid 8'-hydr 99.9 2.7E-24 5.8E-29 179.0 17.1 155 60-228 32-186 (463)
14 PLN02655 ent-kaurene oxidase 99.9 3.7E-24 8.1E-29 178.4 17.6 161 65-228 1-161 (466)
15 KOG0158 Cytochrome P450 CYP3/C 99.9 6.7E-24 1.4E-28 173.7 16.8 158 65-227 33-190 (499)
16 PLN02290 cytokinin trans-hydro 99.9 2.8E-24 6E-29 181.3 15.1 157 63-228 42-218 (516)
17 PLN02500 cytochrome P450 90B1 99.9 9E-24 2E-28 177.1 16.5 157 60-228 35-195 (490)
18 PLN02302 ent-kaurenoic acid ox 99.9 2.3E-22 5E-27 168.8 17.6 160 58-228 37-200 (490)
19 PLN02774 brassinosteroid-6-oxi 99.9 3.3E-22 7.2E-27 166.6 13.9 155 60-228 28-183 (463)
20 PF00067 p450: Cytochrome P450 99.9 2.3E-22 4.9E-27 166.6 12.4 155 65-228 1-160 (463)
21 KOG0157 Cytochrome P450 CYP4/C 99.9 3E-21 6.4E-26 161.6 16.3 157 61-227 33-192 (497)
22 PLN03141 3-epi-6-deoxocathaste 99.9 1.5E-21 3.2E-26 162.2 14.4 158 59-228 3-164 (452)
23 PLN02169 fatty acid (omega-1)- 99.9 1.3E-20 2.8E-25 158.2 18.0 155 65-228 33-194 (500)
24 PLN03195 fatty acid omega-hydr 99.9 1.4E-20 2.9E-25 158.9 17.0 152 65-228 32-189 (516)
25 PLN02738 carotene beta-ring hy 99.9 9.6E-21 2.1E-25 162.1 15.7 138 83-228 150-287 (633)
26 PLN02987 Cytochrome P450, fami 99.9 1.9E-20 4.2E-25 156.0 15.4 156 59-228 26-185 (472)
27 PLN02936 epsilon-ring hydroxyl 99.8 6.8E-20 1.5E-24 153.7 13.7 155 66-228 15-173 (489)
28 PLN02648 allene oxide synthase 99.8 3.4E-20 7.4E-25 154.1 10.7 163 60-228 14-190 (480)
29 KOG0159 Cytochrome P450 CYP11/ 99.8 3.4E-18 7.3E-23 138.3 13.4 166 60-228 47-219 (519)
30 PLN02426 cytochrome P450, fami 99.7 2.4E-15 5.3E-20 126.4 18.7 148 71-228 49-200 (502)
31 KOG0684 Cytochrome P450 [Secon 99.4 9.5E-12 2.1E-16 99.4 13.0 124 63-193 31-157 (486)
32 COG2124 CypX Cytochrome P450 [ 99.0 3.8E-09 8.3E-14 87.0 10.3 126 88-227 26-158 (411)
33 KOG0114 Predicted RNA-binding 81.7 9 0.0002 25.1 5.8 64 58-126 7-76 (124)
34 PF13625 Helicase_C_3: Helicas 51.7 49 0.0011 22.4 5.0 38 86-126 76-113 (129)
35 PF14164 YqzH: YqzH-like prote 45.7 59 0.0013 19.2 3.8 41 178-221 22-62 (64)
36 PF15330 SIT: SHP2-interacting 42.7 75 0.0016 21.0 4.5 12 70-81 45-56 (107)
37 PHA01327 hypothetical protein 30.6 27 0.00059 18.4 0.8 19 151-169 14-32 (49)
38 PF13893 RRM_5: RNA recognitio 30.5 1E+02 0.0022 16.9 4.3 35 91-126 2-40 (56)
39 cd08780 Death_TRADD Death Doma 27.9 1.7E+02 0.0036 18.7 5.2 69 156-227 13-89 (90)
40 PF14198 TnpV: Transposon-enco 25.9 2.1E+02 0.0045 19.0 6.6 59 159-217 34-96 (111)
41 PLN03134 glycine-rich RNA-bind 23.5 2.6E+02 0.0056 19.4 5.9 49 73-126 38-95 (144)
42 KOG0107 Alternative splicing f 23.3 2E+02 0.0043 21.1 4.2 48 72-124 13-64 (195)
43 KOG0109 RNA-binding protein LA 22.7 1.7E+02 0.0037 23.3 4.1 48 73-125 6-54 (346)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=1.6e-28 Score=202.62 Aligned_cols=163 Identities=33% Similarity=0.537 Sum_probs=145.4
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCc-hh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPL-TM 138 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~-~~ 138 (228)
+..++||||+++|++||++++... +.|..+.++.++||| ++.+++|..++|+++|+++++|++++++..|++|+. ..
T Consensus 23 ~~~~lPPGP~~lPiIGnl~~l~~~-~~h~~~~~ls~~yGp-i~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~ 100 (489)
T KOG0156|consen 23 KRRNLPPGPPPLPIIGNLHQLGSL-PPHRSFRKLSKKYGP-VFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTA 100 (489)
T ss_pred CCCCCCcCCCCCCccccHHHcCCC-chhHHHHHHHHHhCC-eEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence 348899999999999999999765 458999999999999 999999999999999999999999999999999997 33
Q ss_pred hhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHH
Q 040505 139 GTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCG 218 (228)
Q Consensus 139 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~ 218 (228)
....+..++.+++++.+|+.|+++||.....+++.+.+++....-.++++++++.+.+ .+ .+.++|+.+.+..++.
T Consensus 101 ~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~---~~~~vdl~~~l~~~~~ 176 (489)
T KOG0156|consen 101 TLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SK---KGEPVDLSELLDLLVG 176 (489)
T ss_pred hHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cC---CCceeeHHHHHHHHHH
Confidence 5566776667889998999999999999999989999998888889999999999987 21 1258999999999999
Q ss_pred HHHHHHHcCC
Q 040505 219 NVIRKIMFSR 228 (228)
Q Consensus 219 dii~~~~fG~ 228 (228)
++|++++||+
T Consensus 177 nvI~~~~fG~ 186 (489)
T KOG0156|consen 177 NVICRMLFGR 186 (489)
T ss_pred HHHHHHHhCC
Confidence 9999999995
No 2
>PLN02971 tryptophan N-hydroxylase
Probab=99.95 E-value=1.9e-26 Score=195.23 Aligned_cols=165 Identities=47% Similarity=0.935 Sum_probs=137.1
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhC-CceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELN-TNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTM 138 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG-~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~ 138 (228)
++.+.||||+++|++||++++..+...+.++.+|.++|| + ++++++|+++.|+++||+.+++++.+++..|.+++...
T Consensus 54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~-i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~ 132 (543)
T PLN02971 54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTE-IACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY 132 (543)
T ss_pred CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCc-eEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence 456789999999999999888654434677899999999 6 99999999999999999999999998888888887554
Q ss_pred hhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHH
Q 040505 139 GTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCG 218 (228)
Q Consensus 139 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~ 218 (228)
..+.++.+..+.+++.+|+.|+++||++++.+++....+.+.+.++++++.+++.+.+.... +.++|+.+.+.++++
T Consensus 133 ~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~vd~~~~~~~~t~ 209 (543)
T PLN02971 133 AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKN---SEPVDLRFVTRHYCG 209 (543)
T ss_pred chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCceehHHHHHHHHH
Confidence 44555554334578888999999999998887677667788899999999998888765432 237999999999999
Q ss_pred HHHHHHHcCC
Q 040505 219 NVIRKIMFSR 228 (228)
Q Consensus 219 dii~~~~fG~ 228 (228)
|+|++++||.
T Consensus 210 ~vi~~~~fG~ 219 (543)
T PLN02971 210 NAIKRLMFGT 219 (543)
T ss_pred HHHHHHHhCC
Confidence 9999999994
No 3
>PLN02687 flavonoid 3'-monooxygenase
Probab=99.95 E-value=3.6e-26 Score=192.66 Aligned_cols=164 Identities=27% Similarity=0.550 Sum_probs=136.5
Q ss_pred hcCCCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCc
Q 040505 57 ERNKRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPL 136 (228)
Q Consensus 57 ~~~~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~ 136 (228)
.++++.+.||||.++|++|+++++..+ .+..+.+|+++||+ ++++++|+.++++++||+++++++.+++..|.+++.
T Consensus 28 ~~~~~~~~pPgp~~~P~iG~~~~~~~~--~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~ 104 (517)
T PLN02687 28 SGKHKRPLPPGPRGWPVLGNLPQLGPK--PHHTMAALAKTYGP-LFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPP 104 (517)
T ss_pred CCCCCCCCCccCCCCCccccHHhcCCc--hhHHHHHHHHHhCC-eeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCC
Confidence 344556789999999999999887533 47889999999998 999999999999999999999999887778887765
Q ss_pred hhhhhhccCCccceeecCCChhHHHHHHHHH-HhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHH
Q 040505 137 TMGTEYLSGGFLSIAVVPWGQQWKKMRKVVA-SHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARR 215 (228)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~ 215 (228)
......++..+.+.+++.+|+.|+++||.++ +.| +.++++.+.+.++++++++++.|.+.. ++.++|+.+++..
T Consensus 105 ~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~~----~~~~vd~~~~~~~ 179 (517)
T PLN02687 105 NSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLF-SAKALDDFRHVREEEVALLVRELARQH----GTAPVNLGQLVNV 179 (517)
T ss_pred ccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhC-CHHHHHHhHHHHHHHHHHHHHHHHHhc----CCCceeHHHHHHH
Confidence 4433344332234577778999999999998 677 888899999999999999999997642 2237999999999
Q ss_pred HHHHHHHHHHcCC
Q 040505 216 YCGNVIRKIMFSR 228 (228)
Q Consensus 216 ~t~dii~~~~fG~ 228 (228)
+++|+|+.++||+
T Consensus 180 ~t~dvi~~~~fG~ 192 (517)
T PLN02687 180 CTTNALGRAMVGR 192 (517)
T ss_pred HHHHHHHHHHhCc
Confidence 9999999999984
No 4
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.94 E-value=6.3e-25 Score=184.39 Aligned_cols=163 Identities=24% Similarity=0.441 Sum_probs=132.8
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
...+.||||+++|++|+++.+.. ..+.++.+++++||+ ++++++|++++|+++||+++++++++++..|.+++....
T Consensus 28 ~~~~~pPgp~~~Pl~G~l~~~~~--~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~ 104 (504)
T PLN00110 28 PSRKLPPGPRGWPLLGALPLLGN--MPHVALAKMAKRYGP-VMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAG 104 (504)
T ss_pred ccCCCcccCCCCCeeechhhcCC--chHHHHHHHHHHhCC-eEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccc
Confidence 45667999999999999887742 237889999999998 999999999999999999999999988777877764432
Q ss_pred hhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHH
Q 040505 140 TEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGN 219 (228)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~d 219 (228)
......+..+.+++.+|+.|+++|+.+++.+++.++++.+.+.+.++++++++.+.+... +|.++|+.+++..+++|
T Consensus 105 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~---~g~~~~~~~~~~~~~~~ 181 (504)
T PLN00110 105 ATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQ---RGEPVVVPEMLTFSMAN 181 (504)
T ss_pred hhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhcc---CCCcEeHHHHHHHHHHH
Confidence 221111212347777899999999999875448888999999999999999999976543 23489999999999999
Q ss_pred HHHHHHcCC
Q 040505 220 VIRKIMFSR 228 (228)
Q Consensus 220 ii~~~~fG~ 228 (228)
+|++++||.
T Consensus 182 vi~~~~fg~ 190 (504)
T PLN00110 182 MIGQVILSR 190 (504)
T ss_pred HHHHHHhCC
Confidence 999999984
No 5
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.94 E-value=6.3e-25 Score=185.16 Aligned_cols=165 Identities=31% Similarity=0.567 Sum_probs=134.4
Q ss_pred hhhcCCCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCC
Q 040505 55 ARERNKRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASR 134 (228)
Q Consensus 55 ~~~~~~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~ 134 (228)
++.++++.+.||||+++|++||+.++.. ..+..+.+++++||+ ++++++++.++++++||+++++++.+++..|.++
T Consensus 24 ~~~~~~~~~~ppgp~~~pl~G~~~~~~~--~~~~~~~~~~~kyG~-v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~ 100 (514)
T PLN03112 24 NASMRKSLRLPPGPPRWPIVGNLLQLGP--LPHRDLASLCKKYGP-LVYLRLGSVDAITTDDPELIREILLRQDDVFASR 100 (514)
T ss_pred cccccCCCCCccCCCCCCeeeeHHhcCC--chHHHHHHHHHHhCC-eEEEEecCccEEEECCHHHHHHHHHhCCcccccC
Confidence 3445577789999999999999988753 237789999999998 9999999999999999999999998887788776
Q ss_pred Cchhhhh--hccCCccceeecCCChhHHHHHHHHHH-hhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHH
Q 040505 135 PLTMGTE--YLSGGFLSIAVVPWGQQWKKMRKVVAS-HVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRL 211 (228)
Q Consensus 135 ~~~~~~~--~~~~~~~~~~~~~~g~~w~~~R~~~~~-~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~ 211 (228)
+...... ..+.+ ..+++.+|+.|+++||.+.+ .| +.++++.+.+.+.++++++++.+.+... ++.++|+.+
T Consensus 101 ~~~~~~~~~~~g~~--~~~~~~~g~~wk~~Rr~~~~~~f-~~~~l~~~~~~~~~~~~~lv~~l~~~~~---~~~~vd~~~ 174 (514)
T PLN03112 101 PRTLAAVHLAYGCG--DVALAPLGPHWKRMRRICMEHLL-TTKRLESFAKHRAEEARHLIQDVWEAAQ---TGKPVNLRE 174 (514)
T ss_pred CCcccceeeccCCC--ceEeCCCCHHHHHHHHHHHHHhc-CHHHHHHhhHHHHHHHHHHHHHHHHhhc---cCCeeeHHH
Confidence 6432211 12222 34567779999999999765 56 8888999999999999999998865433 234899999
Q ss_pred HHHHHHHHHHHHHHcCC
Q 040505 212 VARRYCGNVIRKIMFSR 228 (228)
Q Consensus 212 ~~~~~t~dii~~~~fG~ 228 (228)
.+.++++|+++.++||+
T Consensus 175 ~~~~~~~~vi~~~~fG~ 191 (514)
T PLN03112 175 VLGAFSMNNVTRMLLGK 191 (514)
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 99999999999999994
No 6
>PTZ00404 cytochrome P450; Provisional
Probab=99.94 E-value=4.8e-25 Score=184.53 Aligned_cols=158 Identities=16% Similarity=0.274 Sum_probs=130.9
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
...+.+|||+++|++|++..+.. ..+..+.+++++||+ ++++++++.++|+++||+++++++.++...|.+++....
T Consensus 26 ~~~~~~pgp~~~p~~G~~~~~~~--~~~~~~~~~~~~yG~-i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~ 102 (482)
T PTZ00404 26 IHKNELKGPIPIPILGNLHQLGN--LPHRDLTKMSKKYGG-IFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPS 102 (482)
T ss_pred ccCCCCCCCCCCCeeccHhhhcc--cHHHHHHHHHHHhCC-eeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcce
Confidence 44566799999999999988754 337889999999998 999999999999999999999999877666666554322
Q ss_pred h--hhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHH
Q 040505 140 T--EYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYC 217 (228)
Q Consensus 140 ~--~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t 217 (228)
. ..++. + +++.+|+.|+++|++++++| +.++++.+.+.+.+.++++++.|.+..+. +.++|+.+++.+++
T Consensus 103 ~~~~~~~~---~-l~~~~g~~w~~~Rk~~~~~f-~~~~l~~~~~~i~~~~~~l~~~l~~~~~~---~~~vd~~~~~~~~~ 174 (482)
T PTZ00404 103 IKHGTFYH---G-IVTSSGEYWKRNREIVGKAM-RKTNLKHIYDLLDDQVDVLIESMKKIESS---GETFEPRYYLTKFT 174 (482)
T ss_pred eeeeccCC---c-eeccChHHHHHHHHHHHHHH-hhhccccHHHHHHHHHHHHHHHHHHHHhc---CCccCHHHHHHHHH
Confidence 1 11222 3 56677999999999999999 78889999999999999999999765433 33799999999999
Q ss_pred HHHHHHHHcCC
Q 040505 218 GNVIRKIMFSR 228 (228)
Q Consensus 218 ~dii~~~~fG~ 228 (228)
+|+|++++||+
T Consensus 175 ~dvi~~~~fG~ 185 (482)
T PTZ00404 175 MSAMFKYIFNE 185 (482)
T ss_pred HHHHHHHHhcc
Confidence 99999999994
No 7
>PLN00168 Cytochrome P450; Provisional
Probab=99.93 E-value=1.1e-24 Score=183.70 Aligned_cols=164 Identities=20% Similarity=0.292 Sum_probs=132.1
Q ss_pred CCCCCCCCCCCcccccccccccCC-CCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRN-KPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTM 138 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~-~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~ 138 (228)
+..+.||||+++|++|++..+... ...+..+.+|+++||+ ++++++|+.+.|+++||+++++++.+++..|.+++...
T Consensus 32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~ 110 (519)
T PLN00168 32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGP-VVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVA 110 (519)
T ss_pred CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCC-eEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCccc
Confidence 445679999999999999866422 2346788999999998 99999999999999999999999998888887776544
Q ss_pred hhhhccCCccceeecCCChhHHHHHH-HHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHH
Q 040505 139 GTEYLSGGFLSIAVVPWGQQWKKMRK-VVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYC 217 (228)
Q Consensus 139 ~~~~~~~~~~~~~~~~~g~~w~~~R~-~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t 217 (228)
....++.++..+.+..+|+.|+++|| +++++| +.++++.+.+.+.++++++++.|.+..+. +..+|+.+.+..++
T Consensus 111 ~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~f-s~~~l~~~~~~~~~~~~~l~~~l~~~~~~---~~~v~~~~~~~~~~ 186 (519)
T PLN00168 111 SSRLLGESDNTITRSSYGPVWRLLRRNLVAETL-HPSRVRLFAPARAWVRRVLVDKLRREAED---AAAPRVVETFQYAM 186 (519)
T ss_pred chhhhccCCCceeCCCCCHHHHHHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCcCHHHHHHHHH
Confidence 33444443222233467999999987 677887 88899999999999999999999765432 23689999999999
Q ss_pred HHHHHHHHcCC
Q 040505 218 GNVIRKIMFSR 228 (228)
Q Consensus 218 ~dii~~~~fG~ 228 (228)
+++|+.++||.
T Consensus 187 ~~ii~~~~fG~ 197 (519)
T PLN00168 187 FCLLVLMCFGE 197 (519)
T ss_pred HHHHHHHHcCC
Confidence 99999999994
No 8
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.93 E-value=1.2e-24 Score=182.97 Aligned_cols=164 Identities=23% Similarity=0.401 Sum_probs=133.4
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
++.+.||||++.|++|++.++.... .+..+.+|+++||+ ++++++++++.|+++||+.+++++.+++..|.+++....
T Consensus 27 ~~~~~pPgp~~~p~~g~l~~~~~~~-~~~~~~~~~~~yG~-v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~ 104 (503)
T PLN02394 27 KKLKLPPGPAAVPIFGNWLQVGDDL-NHRNLAEMAKKYGD-VFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVV 104 (503)
T ss_pred CcCCCCcCCCCCCeeeeHHhcCCCc-hhHHHHHHHHHhCC-eEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcch
Confidence 5577899999999999998875443 36789999999998 999999999999999999999999877777776654333
Q ss_pred hhhccCCccceeecCCChhHHHHHHHHH-HhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHH
Q 040505 140 TEYLSGGFLSIAVVPWGQQWKKMRKVVA-SHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCG 218 (228)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~ 218 (228)
.+.+.+.+.+.+++.+|+.|+++||.+. +.| +.++++.+.+.+++++++++++|.+..+. .+..+|+.+++..+++
T Consensus 105 ~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f-~~~~l~~~~~~i~~~v~~lv~~l~~~~~~--~~~~v~~~~~~~~~~~ 181 (503)
T PLN02394 105 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFF-TNKVVQQYRYGWEEEADLVVEDVRANPEA--ATEGVVIRRRLQLMMY 181 (503)
T ss_pred HhHhccCCCceeecCCCHHHHHHHHHHHHHhc-ChHHHHHhhHHHHHHHHHHHHHHHHhhhc--cCCcEecHHHHHHHHH
Confidence 3333222234577778999999999997 666 88888999999999999999999765332 2336899999999999
Q ss_pred HHHHHHHcCC
Q 040505 219 NVIRKIMFSR 228 (228)
Q Consensus 219 dii~~~~fG~ 228 (228)
|++++++||+
T Consensus 182 dvi~~~~fG~ 191 (503)
T PLN02394 182 NIMYRMMFDR 191 (503)
T ss_pred HHHHHHHhCC
Confidence 9999999994
No 9
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.93 E-value=1.8e-24 Score=181.79 Aligned_cols=163 Identities=23% Similarity=0.413 Sum_probs=131.7
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
++.+.||||+++|++||+.++.... .+.++.+++++||+ ++++++|+.++|+++|||++++++.+++..|.+++....
T Consensus 25 ~~~~~pPgp~~~P~iG~~~~~~~~~-~~~~~~~~~~~yG~-~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~ 102 (499)
T PLN03234 25 KSLRLPPGPKGLPIIGNLHQMEKFN-PQHFLFRLSKLYGP-IFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKG 102 (499)
T ss_pred CCCCCCcCCCCCCeeccHHhcCCCC-ccHHHHHHHHHcCC-eEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence 5667899999999999998875433 36788999999998 999999999999999999999999888778877764322
Q ss_pred hhhccCCccceeecCCChhHHHHHHHH-HHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHH
Q 040505 140 TEYLSGGFLSIAVVPWGQQWKKMRKVV-ASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCG 218 (228)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~ 218 (228)
...+...+..+.+...++.|+++||.+ .+.| +.++++.+.+.++++++++++.|.+..+. +.++|+.+.+..+++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f-~~~~l~~~~~~i~~~~~~ll~~l~~~~~~---~~~vd~~~~~~~~t~ 178 (499)
T PLN03234 103 QQTMSYQGRELGFGQYTAYYREMRKMCMVNLF-SPNRVASFRPVREEECQRMMDKIYKAADQ---SGTVDLSELLLSFTN 178 (499)
T ss_pred hhhhccCCCccccCCCcHHHHHHHHHHHHHhc-CHHHHHHhHHHHHHHHHHHHHHHHHhccC---CCeEEHHHHHHHHHH
Confidence 222221112234556678999999985 5666 88889999999999999999999765443 338999999999999
Q ss_pred HHHHHHHcCC
Q 040505 219 NVIRKIMFSR 228 (228)
Q Consensus 219 dii~~~~fG~ 228 (228)
|++++++||+
T Consensus 179 dvi~~~~fG~ 188 (499)
T PLN03234 179 CVVCRQAFGK 188 (499)
T ss_pred HHHHHHHhCC
Confidence 9999999994
No 10
>PLN02966 cytochrome P450 83A1
Probab=99.93 E-value=1.5e-24 Score=182.25 Aligned_cols=163 Identities=25% Similarity=0.498 Sum_probs=131.7
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
+..+.||||+++|++||+.++.... .+..+.+|+++||+ ++++++++.++|+++||+.+++++.+++..|.+++....
T Consensus 26 ~~~~~ppgp~~~p~~G~l~~l~~~~-~~~~~~~~~~~yG~-v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~ 103 (502)
T PLN02966 26 KRYKLPPGPSPLPVIGNLLQLQKLN-PQRFFAGWAKKYGP-ILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRG 103 (502)
T ss_pred CCCCCCcCCCCCCeeccHHhcCCCC-hhHHHHHHHHHhCC-eEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcc
Confidence 4556799999999999998874332 37789999999998 999999999999999999999999887766765543322
Q ss_pred hhhccCCccceeecCCChhHHHHHHH-HHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHH
Q 040505 140 TEYLSGGFLSIAVVPWGQQWKKMRKV-VASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCG 218 (228)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~w~~~R~~-~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~ 218 (228)
......+...+.++.+|+.|+++|+. +.+.| +.++++.+.+.++++++++++.|.+.++. +.++|+.+++..+++
T Consensus 104 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f-~~~~l~~~~~~i~~~~~~l~~~l~~~~~~---~~~vdl~~~~~~~t~ 179 (502)
T PLN02966 104 HEFISYGRRDMALNHYTPYYREIRKMGMNHLF-SPTRVATFKHVREEEARRMMDKINKAADK---SEVVDISELMLTFTN 179 (502)
T ss_pred ceeeccCcceeeeCCCCHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCceeHHHHHHHHHH
Confidence 22222222234456669999999999 66777 88889999999999999999999765433 337999999999999
Q ss_pred HHHHHHHcCC
Q 040505 219 NVIRKIMFSR 228 (228)
Q Consensus 219 dii~~~~fG~ 228 (228)
|+|+.++||.
T Consensus 180 dvi~~~~fG~ 189 (502)
T PLN02966 180 SVVCRQAFGK 189 (502)
T ss_pred HHHHHHHhCC
Confidence 9999999994
No 11
>PLN02183 ferulate 5-hydroxylase
Probab=99.93 E-value=2.9e-24 Score=181.07 Aligned_cols=159 Identities=28% Similarity=0.527 Sum_probs=126.9
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
+..+.||||+++|++|++..+.. ..+.++.+|+++||+ +|++++++.+.|+++||+++++++.+++..|..++....
T Consensus 33 ~~~~~ppgp~~~Pl~G~l~~~~~--~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~ 109 (516)
T PLN02183 33 RRLPYPPGPKGLPIIGNMLMMDQ--LTHRGLANLAKQYGG-LFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIA 109 (516)
T ss_pred CCCCCCcCCCCCCeeccHHhcCC--cchHHHHHHHHHhCC-eeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccc
Confidence 44577999999999999987632 236789999999998 999999999999999999999999887777777664332
Q ss_pred hhhccCCccceeecCCChhHHHHHHHH-HHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHH
Q 040505 140 TEYLSGGFLSIAVVPWGQQWKKMRKVV-ASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCG 218 (228)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~ 218 (228)
...+..+..+.+++.+|+.|+++|+.+ .+.| +.+.++.+.+.+ ++++.+++.|.+. .|.++|+.+++.++++
T Consensus 110 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f-~~~~l~~~~~~~-~~~~~~~~~l~~~-----~~~~v~~~~~~~~~~~ 182 (516)
T PLN02183 110 ISYLTYDRADMAFAHYGPFWRQMRKLCVMKLF-SRKRAESWASVR-DEVDSMVRSVSSN-----IGKPVNIGELIFTLTR 182 (516)
T ss_pred hhccccCCCceEeCCCChHHHHHHHHHHHHhc-CHHHHHHHHHHH-HHHHHHHHHHHhc-----CCCcEeHHHHHHHHHH
Confidence 222222222447778899999999994 6777 888888888864 6789999998542 2348999999999999
Q ss_pred HHHHHHHcCC
Q 040505 219 NVIRKIMFSR 228 (228)
Q Consensus 219 dii~~~~fG~ 228 (228)
|+++.++||.
T Consensus 183 ~vi~~~~fG~ 192 (516)
T PLN02183 183 NITYRAAFGS 192 (516)
T ss_pred HHHHhHhhcC
Confidence 9999999994
No 12
>PLN03018 homomethionine N-hydroxylase
Probab=99.93 E-value=1e-23 Score=177.92 Aligned_cols=167 Identities=32% Similarity=0.635 Sum_probs=130.5
Q ss_pred cCCCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHh-CCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCc
Q 040505 58 RNKRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMREL-NTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPL 136 (228)
Q Consensus 58 ~~~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~ky-G~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~ 136 (228)
++++.+.||||+++|++||++++........++.++.++| |+ |+++++|++++|+++||+.+++++++++..|++++.
T Consensus 35 ~~~~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~-i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~ 113 (534)
T PLN03018 35 KDRSRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTD-IACFNFAGTHTITINSDEIAREAFRERDADLADRPQ 113 (534)
T ss_pred CCCCCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCC-eEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCC
Confidence 3345567999999999999998754332124466666666 77 999999999999999999999999988777888775
Q ss_pred hhhhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHH
Q 040505 137 TMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRY 216 (228)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~ 216 (228)
....+.++.+..++++..+|+.|+++|+++++.|.+....+.+.+.++++++++++.+.+..+.+ .++|+.+.+.++
T Consensus 114 ~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~---~~vd~~~~~~~~ 190 (534)
T PLN03018 114 LSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRS---ETVDVRELSRVY 190 (534)
T ss_pred chhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccC---CceeHHHHHHHH
Confidence 44444455443456676679999999999999985655455666677778999999997654322 379999999999
Q ss_pred HHHHHHHHHcCC
Q 040505 217 CGNVIRKIMFSR 228 (228)
Q Consensus 217 t~dii~~~~fG~ 228 (228)
++|+|++++||.
T Consensus 191 t~~vi~~~~fG~ 202 (534)
T PLN03018 191 GYAVTMRMLFGR 202 (534)
T ss_pred HHHHHHHHHhCC
Confidence 999999999994
No 13
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.92 E-value=2.7e-24 Score=179.05 Aligned_cols=155 Identities=19% Similarity=0.263 Sum_probs=125.8
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
.+.+.||||+++|++|++.++.... .+.++.+++++||+ ++++++++++.|+++||+++++++.+++..+........
T Consensus 32 ~~~~~Ppgp~~~P~iG~~~~~~~~~-~~~~~~~~~~~yG~-i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~~~~~ 109 (463)
T PLN02196 32 TKLPLPPGTMGWPYVGETFQLYSQD-PNVFFASKQKRYGS-VFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASK 109 (463)
T ss_pred CCCCCCCCCCCCCccchHHHHHhcC-HHHHHHHHHHHhhh-hheeeecCCceEEEcCHHHHHHHHhCCCCcccccCchHH
Confidence 4567789999999999998765433 37889999999998 999999999999999999999999877666632222111
Q ss_pred hhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHH
Q 040505 140 TEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGN 219 (228)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~d 219 (228)
...++.. + ++..+|+.|+++||++++.| +.++++.+.+.++++++++++.|. +.++|+.+++..+++|
T Consensus 110 ~~~~g~~--~-l~~~~g~~w~~~Rk~l~~~f-~~~~l~~~~~~i~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~ 177 (463)
T PLN02196 110 ERMLGKQ--A-IFFHQGDYHAKLRKLVLRAF-MPDAIRNMVPDIESIAQESLNSWE--------GTQINTYQEMKTYTFN 177 (463)
T ss_pred HHHcCcc--c-ccccCcHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHcCC--------CCeEEeHHHHHHHHHH
Confidence 2223332 2 55567999999999999998 888899999999999999998873 2268999999999999
Q ss_pred HHHHHHcCC
Q 040505 220 VIRKIMFSR 228 (228)
Q Consensus 220 ii~~~~fG~ 228 (228)
+++.++||.
T Consensus 178 v~~~~~fG~ 186 (463)
T PLN02196 178 VALLSIFGK 186 (463)
T ss_pred HHHHHHcCC
Confidence 999999994
No 14
>PLN02655 ent-kaurene oxidase
Probab=99.92 E-value=3.7e-24 Score=178.37 Aligned_cols=161 Identities=19% Similarity=0.179 Sum_probs=132.1
Q ss_pred CCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhhhhcc
Q 040505 65 PPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLS 144 (228)
Q Consensus 65 pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~ 144 (228)
||||+++|++||++++.... .+..+.+|+++||+ ++++++++.+.++++||+++++++.++...|.+++.......++
T Consensus 1 ppgp~~lP~iG~l~~~~~~~-~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~ 78 (466)
T PLN02655 1 VPAVPGLPVIGNLLQLKEKK-PHRTFTKWSEIYGP-IYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLT 78 (466)
T ss_pred CcCCCCCCccccHHHcCCCc-hhHHHHHHHHHhCC-eEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHh
Confidence 68999999999999886433 47889999999998 99999999999999999999999998888887776443334344
Q ss_pred CCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHHHHHH
Q 040505 145 GGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKI 224 (228)
Q Consensus 145 ~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~dii~~~ 224 (228)
+++..+...++|+.|+++||.+.+.+++.+.++.+.+.++++++.+++.+.+..+.. .+.++|+.+.+.++++|+++.+
T Consensus 79 ~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~vd~~~~~~~~t~dvi~~~ 157 (466)
T PLN02655 79 RDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDD-PHSPVNFRDVFENELFGLSLIQ 157 (466)
T ss_pred cCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhcccc-CCCceeHHHHHHHHHHHHHHHH
Confidence 333334444568999999998888876877788999999999999999987654421 2347999999999999999999
Q ss_pred HcCC
Q 040505 225 MFSR 228 (228)
Q Consensus 225 ~fG~ 228 (228)
+||.
T Consensus 158 ~fG~ 161 (466)
T PLN02655 158 ALGE 161 (466)
T ss_pred Hhcc
Confidence 9994
No 15
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.92 E-value=6.7e-24 Score=173.68 Aligned_cols=158 Identities=21% Similarity=0.315 Sum_probs=126.2
Q ss_pred CCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhhhhcc
Q 040505 65 PPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLS 144 (228)
Q Consensus 65 pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~ 144 (228)
+|+|++.|++||+..+...+....+..+.+.+||+ ++.++.+.+|.++|+|||++++|+.++.++|.++......+.-.
T Consensus 33 i~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~-~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~ 111 (499)
T KOG0158|consen 33 IPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRP-VVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPED 111 (499)
T ss_pred CCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCC-EEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCC
Confidence 58999999999999987655324444444445588 99999999999999999999999999999998854111111111
Q ss_pred CCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHHHHHH
Q 040505 145 GGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKI 224 (228)
Q Consensus 145 ~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~dii~~~ 224 (228)
.-++..++..+|+.||++|..++|.| ++++++.+.|.+++.++++++.+++....+ ..+++.+.+.++|.|||++|
T Consensus 112 ~l~~~~Lf~~~g~~WK~lR~~lsP~F-ts~kmk~m~~t~~~~~~~l~~~l~~~~~~~---~~~~~~dl~~~yT~DVI~~~ 187 (499)
T KOG0158|consen 112 PLSALNLFFLRGERWKRLRTKLSPTF-TSGKLKKMFPTMEEVGDELVRHLRRKSEGG---QEGEIKDLCARYTTDVIGSC 187 (499)
T ss_pred cccccCchhccCchHHHHHHhhcccc-chhhHHHHHHHHHHHHHHHHHHHHHhhccc---CCccHHHHHHHHHHHHHhHh
Confidence 11112377778999999999999999 888899999999999999999998865532 36788889999999999999
Q ss_pred HcC
Q 040505 225 MFS 227 (228)
Q Consensus 225 ~fG 227 (228)
+||
T Consensus 188 AfG 190 (499)
T KOG0158|consen 188 AFG 190 (499)
T ss_pred hcc
Confidence 999
No 16
>PLN02290 cytokinin trans-hydroxylase
Probab=99.92 E-value=2.8e-24 Score=181.32 Aligned_cols=157 Identities=13% Similarity=0.200 Sum_probs=124.5
Q ss_pred CCCCCCCCcccccccccccCC-----------------CCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHH
Q 040505 63 PLPPGPAPWPIVGSLPEMWRN-----------------KPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLK 125 (228)
Q Consensus 63 ~~pPgP~~~p~~G~~~~~~~~-----------------~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~ 125 (228)
..||||+++|++||++++... ......+.+|+++||+ ++++++|+.+.|+++||+.+++++.
T Consensus 42 ~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~dp~~v~~il~ 120 (516)
T PLN02290 42 QGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGK-RFIYWNGTEPRLCLTETELIKELLT 120 (516)
T ss_pred cCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCC-eEEEccCCccEEEECCHHHHHHHHh
Confidence 348999999999999887420 1123457889999998 9999999999999999999999998
Q ss_pred hcCCCCCCCCchh---hhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCC
Q 040505 126 VHDSVFASRPLTM---GTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNN 202 (228)
Q Consensus 126 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~ 202 (228)
+++ .+..++... ....++. + ++..+|+.|+++||.+++.| +.++++.+.+.+.++++++++.|.+..+.
T Consensus 121 ~~~-~~~~r~~~~~~~~~~~~g~---~-l~~~~g~~Wk~~Rk~~~~~f-~~~~l~~~~~~i~~~~~~l~~~l~~~~~~-- 192 (516)
T PLN02290 121 KYN-TVTGKSWLQQQGTKHFIGR---G-LLMANGADWYHQRHIAAPAF-MGDRLKGYAGHMVECTKQMLQSLQKAVES-- 192 (516)
T ss_pred cCC-CCCCCcchhhhHHHHHhcC---C-ccccCchHHHHHHhhccccc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 763 344444321 1122333 3 55567999999999999998 88889999999999999999999765432
Q ss_pred CCccccHHHHHHHHHHHHHHHHHcCC
Q 040505 203 VDSVINVRLVARRYCGNVIRKIMFSR 228 (228)
Q Consensus 203 ~~~~~d~~~~~~~~t~dii~~~~fG~ 228 (228)
++.++|+.+++..+++|+|+.++||.
T Consensus 193 ~~~~vd~~~~~~~~~~~vi~~~~fG~ 218 (516)
T PLN02290 193 GQTEVEIGEYMTRLTADIISRTEFDS 218 (516)
T ss_pred CCceEEhHHHHHHHHHHHHHHHHcCC
Confidence 22378999999999999999999994
No 17
>PLN02500 cytochrome P450 90B1
Probab=99.92 E-value=9e-24 Score=177.14 Aligned_cols=157 Identities=18% Similarity=0.223 Sum_probs=122.0
Q ss_pred CCCCCCCCCCCcccccccccccC---CCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCc
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWR---NKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPL 136 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~ 136 (228)
+..+.||||+++|++||+..+.. .+.++.++.+++++||+ ++++++++++.|+++||+++++++.+++..|..+..
T Consensus 35 ~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~-v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~ 113 (490)
T PLN02500 35 KRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGK-IYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP 113 (490)
T ss_pred CCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcc-cccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence 55678999999999999875432 13356778999999998 999999999999999999999999887666654332
Q ss_pred hhhhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhH-hHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHH
Q 040505 137 TMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDS-LLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARR 215 (228)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~ 215 (228)
......++.. + ++..+|+.|+++|+++++.| +..+++. +.+.+.+.+.++++.|.+ +.++|+.+.+.+
T Consensus 114 ~~~~~~~g~~--~-~~~~~g~~wr~~Rk~~~~~f-~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~~vd~~~~~~~ 182 (490)
T PLN02500 114 RSIGGILGKW--S-MLVLVGDMHRDMRSISLNFL-SHARLRTHLLKEVERHTLLVLDSWKE-------NSTFSAQDEAKK 182 (490)
T ss_pred hHHHHHhCcc--c-ccccCCHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHhCC-------CCCEEehHHHHH
Confidence 2223344432 3 44456999999999999988 7777766 567777777777777631 226899999999
Q ss_pred HHHHHHHHHHcCC
Q 040505 216 YCGNVIRKIMFSR 228 (228)
Q Consensus 216 ~t~dii~~~~fG~ 228 (228)
+++|+|++++||.
T Consensus 183 ~~~~vi~~~~fg~ 195 (490)
T PLN02500 183 FTFNLMAKHIMSM 195 (490)
T ss_pred HHHHHHHHHHhCC
Confidence 9999999999984
No 18
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.90 E-value=2.3e-22 Score=168.79 Aligned_cols=160 Identities=19% Similarity=0.252 Sum_probs=126.1
Q ss_pred cCCCCCCCCCCCCcccccccccccC---CCCchHHHHHHHHHhCC-ceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCC
Q 040505 58 RNKRKPLPPGPAPWPIVGSLPEMWR---NKPTFKWIHGLMRELNT-NICCIRLGNVHVIPVTSPEIALEFLKVHDSVFAS 133 (228)
Q Consensus 58 ~~~~~~~pPgP~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~-~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~ 133 (228)
+....+.||||+++|++|+++++.. ....+.++.+++++||+ +++++++++.+.++++||+.+++++.++ ..|.+
T Consensus 37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~ 115 (490)
T PLN02302 37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEP 115 (490)
T ss_pred ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-Ccccc
Confidence 3355678999999999999987743 23447789999999996 3689999999999999999999999765 44544
Q ss_pred CCchhhhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH
Q 040505 134 RPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA 213 (228)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~ 213 (228)
+........++.+ .+...+|+.|+++|+.+.+.|.+.++++.+.+.++++++++++.|.+. + .+|+.+++
T Consensus 116 ~~~~~~~~~~g~~---~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~~----~---~v~~~~~~ 185 (490)
T PLN02302 116 GWPESTVELIGRK---SFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSKM----G---EIEFLTEL 185 (490)
T ss_pred CCchhHHHHhccc---cccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcCC----C---CEehHHHH
Confidence 3322222333432 244556999999999999999556778999999999999999888421 1 68999999
Q ss_pred HHHHHHHHHHHHcCC
Q 040505 214 RRYCGNVIRKIMFSR 228 (228)
Q Consensus 214 ~~~t~dii~~~~fG~ 228 (228)
..+++|++++++||+
T Consensus 186 ~~~~~~vi~~~~~G~ 200 (490)
T PLN02302 186 RKLTFKIIMYIFLSS 200 (490)
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999999984
No 19
>PLN02774 brassinosteroid-6-oxidase
Probab=99.88 E-value=3.3e-22 Score=166.55 Aligned_cols=155 Identities=16% Similarity=0.159 Sum_probs=123.3
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
...+.||||+++|++||+..+.++. ..++.+++++||+ ++++++++++.++++||+.+++++.++...+..+.....
T Consensus 28 ~r~~~ppgp~~~P~~G~~~~~~~~~--~~~~~~~~~~yG~-i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~ 104 (463)
T PLN02774 28 SKKGLPPGTMGWPLFGETTEFLKQG--PDFMKNQRLRYGS-FFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSM 104 (463)
T ss_pred CCCCCCCCCCCCCchhhHHHHHHhh--HHHHHHHHHHhcc-CccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHH
Confidence 3346789999999999998875433 5688999999998 999999999999999999999999876665533322223
Q ss_pred hhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhH-hHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHH
Q 040505 140 TEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDS-LLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCG 218 (228)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~ 218 (228)
.+.++.+ + +++.+|+.|+++|+.+.+.| +.+.++. +.+.+.+.+++++++|.. +.++|+.+.+..+++
T Consensus 105 ~~~lg~~--~-~~~~~g~~w~~~R~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~ 173 (463)
T PLN02774 105 LDILGTC--N-IAAVHGSTHRYMRGSLLSLI-SPTMIRDHLLPKIDEFMRSHLSGWDG-------LKTIDIQEKTKEMAL 173 (463)
T ss_pred HHHhCcc--c-hhhcCCHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhhCC-------CCCEEeeHHHHHHHH
Confidence 3445443 2 45567999999999999988 8887775 789999888888887732 126899999999999
Q ss_pred HHHHHHHcCC
Q 040505 219 NVIRKIMFSR 228 (228)
Q Consensus 219 dii~~~~fG~ 228 (228)
+++++++||.
T Consensus 174 ~~~~~~~~g~ 183 (463)
T PLN02774 174 LSALKQIAGT 183 (463)
T ss_pred HHHHHHHcCC
Confidence 9999999983
No 20
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.88 E-value=2.3e-22 Score=166.57 Aligned_cols=155 Identities=27% Similarity=0.462 Sum_probs=128.7
Q ss_pred CCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhhh---
Q 040505 65 PPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTE--- 141 (228)
Q Consensus 65 pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~~--- 141 (228)
||||+++|++||++++...+..+.++.+++++||+ |+++++++++.++++||+.+++++.+++..++.++......
T Consensus 1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~-i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~ 79 (463)
T PF00067_consen 1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGP-IFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFR 79 (463)
T ss_dssp SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTS-EEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHH
T ss_pred CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCC-EEEEeEecccccccccchhhcccccccccccccccccccccccc
Confidence 79999999999999997644558889999999998 99999999999999999999999988766666543322211
Q ss_pred -hccCCccceeecCCChhHHHHHHHHHHhhhchh-hhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHH
Q 040505 142 -YLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSV-RLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGN 219 (228)
Q Consensus 142 -~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~d 219 (228)
...+ .+ ++..+|+.|+.+|+.+.++| +.. .+ .+.+.+++.++++++.|.+..+.++ ++|+.++++.+++|
T Consensus 80 ~~~~~--~~-l~~~~~~~~~~~R~~~~~~~-~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~---~vd~~~~~~~~~~d 151 (463)
T PF00067_consen 80 GPFGG--KG-LFFSDGERWRRQRRLLAPAF-SSKKIL-KLEPLIDEEAEELIDQLRKKAGSSG---PVDLFDWLRRFALD 151 (463)
T ss_dssp HHHTT--TS-STTSSHHHHHHHHHHHHHHH-SHHHHH-HHHHHHHHHHHHHHHHHHHTTTSES---EEEHHHHHHHHHHH
T ss_pred ccccc--cc-cccccccccccccccccccc-cccccc-ccccccccccccccccccccccccc---eeeeeccccccccc
Confidence 1222 22 55566899999999999999 555 56 8999999999999999988766543 79999999999999
Q ss_pred HHHHHHcCC
Q 040505 220 VIRKIMFSR 228 (228)
Q Consensus 220 ii~~~~fG~ 228 (228)
+++.++||.
T Consensus 152 ~i~~~~fG~ 160 (463)
T PF00067_consen 152 VIGRVLFGK 160 (463)
T ss_dssp HHHHHHHSS
T ss_pred ccccccccc
Confidence 999999994
No 21
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.87 E-value=3e-21 Score=161.57 Aligned_cols=157 Identities=24% Similarity=0.415 Sum_probs=129.8
Q ss_pred CCCCCCCCCCcccccccccccCC-CCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCch--
Q 040505 61 RKPLPPGPAPWPIVGSLPEMWRN-KPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLT-- 137 (228)
Q Consensus 61 ~~~~pPgP~~~p~~G~~~~~~~~-~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~-- 137 (228)
....||||.++|++|++.++.+. .....++.++..+||+ +++.++|+.+.|+++||+.+++|+.++...+.+.+..
T Consensus 33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~ 111 (497)
T KOG0157|consen 33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGP-IFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPE 111 (497)
T ss_pred HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCc-hhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHH
Confidence 45668999999999999998654 4457788999999998 9999999999999999999999996555544444332
Q ss_pred hhhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHH
Q 040505 138 MGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYC 217 (228)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t 217 (228)
...+++|.| ++..+|+.|+++||+++++| +...++.+.+.+.+.+..++..+..... +..+|+++.++++|
T Consensus 112 ~~~~~lG~g----ll~~~g~~W~~~Rk~~~~~f-~~~~L~~~~~~~~~~~~~~~~~~~~~~~----~~~vd~~~~~~~~t 182 (497)
T KOG0157|consen 112 SLKPWLGDG----LLFSDGEKWHKHRKLLTPAF-HFEILKSFVPVFIESSLILLLLLELAAS----GEEVDLQDLLKRLT 182 (497)
T ss_pred HHHHHhcCc----cccCCchHHHHHHhhccHhh-hHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCeEcHHHHHHHHH
Confidence 345677775 44455999999999999999 8888999999999999998888876432 22399999999999
Q ss_pred HHHHHHHHcC
Q 040505 218 GNVIRKIMFS 227 (228)
Q Consensus 218 ~dii~~~~fG 227 (228)
+|+||+++||
T Consensus 183 ld~i~~~~~G 192 (497)
T KOG0157|consen 183 LDIICKTAMG 192 (497)
T ss_pred HHHHHHHhcC
Confidence 9999999999
No 22
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.87 E-value=1.5e-21 Score=162.24 Aligned_cols=158 Identities=15% Similarity=0.193 Sum_probs=120.7
Q ss_pred CCCCCCCCCCCCcccccccccccC---CCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCC
Q 040505 59 NKRKPLPPGPAPWPIVGSLPEMWR---NKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRP 135 (228)
Q Consensus 59 ~~~~~~pPgP~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~ 135 (228)
+++.+.||||.++|++||++++.. ....+.++.+++++||+ |+++++++.+.|+++||+++++++.+++..+..+.
T Consensus 3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~-i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~ 81 (452)
T PLN03141 3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGK-VFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY 81 (452)
T ss_pred CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhh-eeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence 366778999999999999988743 12347888999999998 99999999999999999999999988877776543
Q ss_pred chhhhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhH-hHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHH
Q 040505 136 LTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDS-LLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVAR 214 (228)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~ 214 (228)
.......+|.+ + ++..+|+.|+++|+++.+.| +...+.. ..+.+.+.++++++.|. ++.++|+.+.+.
T Consensus 82 ~~~~~~l~g~~--~-~~~~~g~~wr~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 150 (452)
T PLN03141 82 PKSLTELMGKS--S-ILLINGSLQRRVHGLIGAFL-KSPHLKAQITRDMERYVSESLDSWR-------DDPPVLVQDETK 150 (452)
T ss_pred chhHHHHhCcc--c-ccccCcHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHhcc-------CCCCEEhHHHHH
Confidence 22233344432 3 55556999999999999998 5555544 34555555555555442 123789999999
Q ss_pred HHHHHHHHHHHcCC
Q 040505 215 RYCGNVIRKIMFSR 228 (228)
Q Consensus 215 ~~t~dii~~~~fG~ 228 (228)
.+++++++.++||.
T Consensus 151 ~~~~~vi~~~~~G~ 164 (452)
T PLN03141 151 KIAFEVLVKALISL 164 (452)
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999983
No 23
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.87 E-value=1.3e-20 Score=158.25 Aligned_cols=155 Identities=19% Similarity=0.273 Sum_probs=116.9
Q ss_pred CCCCCCcccccccccccCCC-CchHHHHHHHHHhCCceEE---EEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCch-hh
Q 040505 65 PPGPAPWPIVGSLPEMWRNK-PTFKWIHGLMRELNTNICC---IRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLT-MG 139 (228)
Q Consensus 65 pPgP~~~p~~G~~~~~~~~~-~~~~~~~~~~~kyG~~v~~---~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~-~~ 139 (228)
.|||+++|++||+..+.... ..++++.+..++||. .++ .++|+.+.++++||+.+++|+.++...|.++... ..
T Consensus 33 ~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~ 111 (500)
T PLN02169 33 QPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNL-TFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI 111 (500)
T ss_pred CCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCC-cEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence 48999999999998775433 234555555556885 555 5678899999999999999998876667665422 22
Q ss_pred hhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhH--hHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHH
Q 040505 140 TEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDS--LLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYC 217 (228)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t 217 (228)
.+.+|.+ ++..+|+.|+++||+++|+| +...+.. +.+.++++++.+++.+.+.++. +.++|+.+.+.++|
T Consensus 112 ~~~~g~g----l~~~~g~~Wr~~Rk~l~p~F-~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~vd~~~~~~~~t 183 (500)
T PLN02169 112 FDVLGEG----ILTVDFELWEDLRKSNHALF-HNQDFIELSLSSNKSKLKEGLVPFLDNAAHE---NIIIDLQDVFMRFM 183 (500)
T ss_pred HHhhcCc----ccccCcHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCeEeHHHHHHHHH
Confidence 3334433 55666999999999999999 6665653 3477778888899888765443 33799999999999
Q ss_pred HHHHHHHHcCC
Q 040505 218 GNVIRKIMFSR 228 (228)
Q Consensus 218 ~dii~~~~fG~ 228 (228)
+|+|++++||.
T Consensus 184 ~dvi~~~~fG~ 194 (500)
T PLN02169 184 FDTSSILMTGY 194 (500)
T ss_pred HHHHHhheeCC
Confidence 99999999994
No 24
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.86 E-value=1.4e-20 Score=158.95 Aligned_cols=152 Identities=20% Similarity=0.308 Sum_probs=117.5
Q ss_pred CCCCCCcccccccccccCCCCchHHHHHHHHHh---CCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh-hh
Q 040505 65 PPGPAPWPIVGSLPEMWRNKPTFKWIHGLMREL---NTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTM-GT 140 (228)
Q Consensus 65 pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~ky---G~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~-~~ 140 (228)
+|||+++|++||++.+... +..+.+|.++| |+ ++.+++++.+.++++||+.+++++.++...+.+..... ..
T Consensus 32 ~pgp~~~p~~G~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~ 107 (516)
T PLN03195 32 RKGPKSWPIIGAALEQLKN---YDRMHDWLVEYLSKDR-TVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYM 107 (516)
T ss_pred cCCCCCCCeecchHHHHhc---cchHHHHHHHHhccCC-cEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHH
Confidence 6999999999998766432 23467777777 77 99999999999999999999999977645554443221 11
Q ss_pred -hhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHH-HHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHH
Q 040505 141 -EYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKR-REEAEELVSFVYNQCIRNNVDSVINVRLVARRYCG 218 (228)
Q Consensus 141 -~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~ 218 (228)
...+.+ +++.+|+.|+++||.+++.| +.++++.+.+.+ .+.++.+++.+.+.... +.++|+.+++..+++
T Consensus 108 ~~~~g~~----l~~~~g~~w~~~Rr~l~~~f-s~~~l~~~~~~~~~~~~~~l~~~l~~~~~~---~~~vd~~~~~~~~~~ 179 (516)
T PLN03195 108 EVLLGDG----IFNVDGELWRKQRKTASFEF-ASKNLRDFSTVVFREYSLKLSSILSQASFA---NQVVDMQDLFMRMTL 179 (516)
T ss_pred HHHhcCe----eeccCcHHHHHHHHhcchhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCeEcHHHHHHHHHH
Confidence 222332 56677999999999999999 788899999976 66677777778654322 337999999999999
Q ss_pred HHHHHHHcCC
Q 040505 219 NVIRKIMFSR 228 (228)
Q Consensus 219 dii~~~~fG~ 228 (228)
|+|+.++||.
T Consensus 180 dvi~~~~fG~ 189 (516)
T PLN03195 180 DSICKVGFGV 189 (516)
T ss_pred HHHHHHHhCC
Confidence 9999999994
No 25
>PLN02738 carotene beta-ring hydroxylase
Probab=99.86 E-value=9.6e-21 Score=162.11 Aligned_cols=138 Identities=15% Similarity=0.251 Sum_probs=113.2
Q ss_pred CCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhhhhccCCccceeecCCChhHHHH
Q 040505 83 NKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKM 162 (228)
Q Consensus 83 ~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 162 (228)
++.++..+.+++++||| |+++++|+.++++++||+.+++++.++...|.++..........+ .+ +++.+|+.|+++
T Consensus 150 ~g~~~~~l~~lh~kYGp-I~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g--~~-l~~~dge~wr~r 225 (633)
T PLN02738 150 GEAFFIPLYELFLTYGG-IFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMG--KG-LIPADGEIWRVR 225 (633)
T ss_pred CchHHHHHHHHHHHhCC-EEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccC--Cc-eecCCcHHHHHH
Confidence 44457889999999999 999999998999999999999999877666665543222222222 23 556679999999
Q ss_pred HHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHHHHHHHcCC
Q 040505 163 RKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMFSR 228 (228)
Q Consensus 163 R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~dii~~~~fG~ 228 (228)
|+.+++.| +.++++.+++.+.+++++++++|.+..+. |.++|+.+.+..+++|+|+.++||.
T Consensus 226 Rr~l~p~F-s~~~v~~l~~~i~~~v~~L~~~L~~~~~~---g~~vdl~~~~~~lt~DVI~~~~FG~ 287 (633)
T PLN02738 226 RRAIVPAL-HQKYVAAMISLFGQASDRLCQKLDAAASD---GEDVEMESLFSRLTLDIIGKAVFNY 287 (633)
T ss_pred HHhccHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCcEeHHHHHHHHHHHHHHHHHhCC
Confidence 99999999 88889999999999999999999876443 3489999999999999999999994
No 26
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.85 E-value=1.9e-20 Score=155.99 Aligned_cols=156 Identities=17% Similarity=0.142 Sum_probs=112.7
Q ss_pred CCCCCCCCCCCCcccccccccccC---CCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCC
Q 040505 59 NKRKPLPPGPAPWPIVGSLPEMWR---NKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRP 135 (228)
Q Consensus 59 ~~~~~~pPgP~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~ 135 (228)
..+.+.||||.++|++||++++.. ....+.++.+++++||+ ++++++++++.++++||+.+++++.+++..|.++.
T Consensus 26 ~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~-v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~ 104 (472)
T PLN02987 26 YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGS-LFMTHLFGEPTVFSADPETNRFILQNEGKLFECSY 104 (472)
T ss_pred cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhch-hhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecC
Confidence 355567999999999999988742 13346778999999998 99999999999999999999999988777775544
Q ss_pred chhhhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHH-HHHHHHHHHHHHHHHhchhCCCCccccHHHHHH
Q 040505 136 LTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLV-KRREEAEELVSFVYNQCIRNNVDSVINVRLVAR 214 (228)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~ 214 (228)
...+...+|.. + ++..+|+.|+++|+++.+ |.+.+.++.+.. .+.+.++..++.| . + ++|+.+.+.
T Consensus 105 ~~~~~~~lg~~--~-l~~~~g~~wr~~R~~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~----~--~---~v~~~~~~~ 171 (472)
T PLN02987 105 PGSISNLLGKH--S-LLLMKGNLHKKMHSLTMS-FANSSIIKDHLLLDIDRLIRFNLDSW----S--S---RVLLMEEAK 171 (472)
T ss_pred cHHHHHHhCcc--c-ccccCcHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHHhh----c--c---ceehHHHHH
Confidence 33344555532 3 444569999999999764 534444444321 1222333333333 1 1 689999999
Q ss_pred HHHHHHHHHHHcCC
Q 040505 215 RYCGNVIRKIMFSR 228 (228)
Q Consensus 215 ~~t~dii~~~~fG~ 228 (228)
++++|++++++||.
T Consensus 172 ~~t~~vi~~~~fg~ 185 (472)
T PLN02987 172 KITFELTVKQLMSF 185 (472)
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999983
No 27
>PLN02936 epsilon-ring hydroxylase
Probab=99.83 E-value=6.8e-20 Score=153.66 Aligned_cols=155 Identities=19% Similarity=0.228 Sum_probs=123.7
Q ss_pred CCCCCcccccccccccC---CCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhhhh
Q 040505 66 PGPAPWPIVGSLPEMWR---NKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEY 142 (228)
Q Consensus 66 PgP~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~~~ 142 (228)
.|-.+||++|+.++... ++..+..+.+|+++||+ ++++++|+.+.++++|||++++++++.+..|.+++.......
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~ 93 (489)
T PLN02936 15 GDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGP-VYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEF 93 (489)
T ss_pred CCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCC-EEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHH
Confidence 56778999998776642 34457889999999998 999999999999999999999999876677766543222222
Q ss_pred ccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHH-HHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHHH
Q 040505 143 LSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLV-KRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVI 221 (228)
Q Consensus 143 ~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~dii 221 (228)
+.+ .+ ++..+|+.|+++||.+++.| +.++++.+.+ .+.++++++++.|.+.... +.++|+.++++++++|+|
T Consensus 94 ~~~--~~-i~~~~g~~wk~~Rk~l~~~f-~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~---g~~vd~~~~~~~~~~dvi 166 (489)
T PLN02936 94 LFG--SG-FAIAEGELWTARRRAVVPSL-HRRYLSVMVDRVFCKCAERLVEKLEPVALS---GEAVNMEAKFSQLTLDVI 166 (489)
T ss_pred Hhc--Cc-cccCCchHHHHHHHhhcCcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCceeHHHHHHHHHHHHH
Confidence 222 23 45566999999999999999 7777877654 7899999999999876432 348999999999999999
Q ss_pred HHHHcCC
Q 040505 222 RKIMFSR 228 (228)
Q Consensus 222 ~~~~fG~ 228 (228)
++++||.
T Consensus 167 ~~~~fG~ 173 (489)
T PLN02936 167 GLSVFNY 173 (489)
T ss_pred HHHHcCC
Confidence 9999994
No 28
>PLN02648 allene oxide synthase
Probab=99.83 E-value=3.4e-20 Score=154.10 Aligned_cols=163 Identities=12% Similarity=0.125 Sum_probs=126.2
Q ss_pred CCCCCCCCCCCcccccccccccC---CCCchHHHHHHHHHhCCceEEEEecCeeE-------EEEcCHHHHHHHHHh---
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWR---NKPTFKWIHGLMRELNTNICCIRLGNVHV-------IPVTSPEIALEFLKV--- 126 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~~v~~~~~~~~~~-------v~i~~p~~~~~vl~~--- 126 (228)
.+.+.|||+.++|++|+..++.. ......++.+..+|||+.||++.++|.|. |+++|||+++.++.+
T Consensus 14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~ 93 (480)
T PLN02648 14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV 93 (480)
T ss_pred CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence 56677999999999999987543 22236889999999994499999988665 999999999999964
Q ss_pred -cCCCCCCCCchhhhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCc
Q 040505 127 -HDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDS 205 (228)
Q Consensus 127 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 205 (228)
++..+..... .....+|.+....++..+|+.|+++|+++.++| +. .++.+.+.|.+.++++++.|...... +.
T Consensus 94 ~~~~~~~~~~~-~~~~l~G~~~~~s~~~~~g~~H~r~Rrll~~~f-~~-~~~~~~~~m~~~~~~~~~~w~~~~~~---~~ 167 (480)
T PLN02648 94 DKRDVFTGTYM-PSTAFTGGYRVLSYLDPSEPKHAKLKSFLFELL-KS-RHRRFIPEFRAAFAELFDTWEAELAK---KG 167 (480)
T ss_pred cccccceeeec-cCccccCCceeeeecCCCCchHHHHHHHHHHHH-HH-hhhhhhhHHHHHHHHHHHHHHHHHhh---CC
Confidence 4333433222 233455543111366677999999999999999 54 67889999999999999999654222 23
Q ss_pred cccHHHHHHHHHHHHHHHHHcCC
Q 040505 206 VINVRLVARRYCGNVIRKIMFSR 228 (228)
Q Consensus 206 ~~d~~~~~~~~t~dii~~~~fG~ 228 (228)
++|+.+.+.++++|++++++||.
T Consensus 168 ~vdv~~~~~~lt~~vi~~~lfG~ 190 (480)
T PLN02648 168 KAEFNDPLDQMAFNFLCKALTGK 190 (480)
T ss_pred CccccchHHHHHHHHHHHHHcCC
Confidence 69999999999999999999984
No 29
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.78 E-value=3.4e-18 Score=138.34 Aligned_cols=166 Identities=17% Similarity=0.238 Sum_probs=133.4
Q ss_pred CCCCCCCCCCCcccccccccccC--CCCchHHHHHHHHHhCCceEEEE-ecCeeEEEEcCHHHHHHHHHhcCCCCCCCC-
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWR--NKPTFKWIHGLMRELNTNICCIR-LGNVHVIPVTSPEIALEFLKVHDSVFASRP- 135 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~--~~~~~~~~~~~~~kyG~~v~~~~-~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~- 135 (228)
++...+|||..+|++|.+..+.. ....|+.....+++||+ ||+.. +|+...|.+.||+.++.++.+++.. .-|+
T Consensus 47 r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~-I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~-P~Rp~ 124 (519)
T KOG0159|consen 47 RPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGP-IFREGMLGRVDLVHVYNPDDVEKVFRNEGKY-PFRPL 124 (519)
T ss_pred CChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCc-eeeeccCCCCCeEEeeCHHHHHHHHhcCCCC-CCccc
Confidence 44556799999999999885433 33468888999999999 99999 7889999999999999999877543 4453
Q ss_pred chh---hhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHH
Q 040505 136 LTM---GTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLV 212 (228)
Q Consensus 136 ~~~---~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~ 212 (228)
... .......+..| +++.+|++|.+.|..+++.+..+++.+.|.|.+++.++++++.+++..+...+..+-|+.+.
T Consensus 125 ~~~~w~~~rd~~~~~~G-l~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~ 203 (519)
T KOG0159|consen 125 LIEPWVAYRDFRGGVCG-LFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQE 203 (519)
T ss_pred ccchhhhhHHhhccCCC-cccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHH
Confidence 111 11222222234 66667999999999999999999999999999999999999999988774334557899999
Q ss_pred HHHHHHHHHHHHHcCC
Q 040505 213 ARRYCGNVIRKIMFSR 228 (228)
Q Consensus 213 ~~~~t~dii~~~~fG~ 228 (228)
+.+++++.||.++||+
T Consensus 204 l~~wslEsi~~V~l~~ 219 (519)
T KOG0159|consen 204 LYRWSLESICLVLLGT 219 (519)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999999985
No 30
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.70 E-value=2.4e-15 Score=126.44 Aligned_cols=148 Identities=19% Similarity=0.217 Sum_probs=109.6
Q ss_pred cccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCch-h-hhhhccCCcc
Q 040505 71 WPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLT-M-GTEYLSGGFL 148 (228)
Q Consensus 71 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~-~-~~~~~~~~~~ 148 (228)
.++.|+......+ ...++.++.++++..++++..++. ++++||+.+++++.++...|.+.... . ..+.+|.+
T Consensus 49 ~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~g-- 122 (502)
T PLN02426 49 AYLTASWAKDFDN--LCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGRG-- 122 (502)
T ss_pred CCccHHHHHhccc--HHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCCc--
Confidence 4467776654332 366677788888744777776554 89999999999998776667554322 2 22444443
Q ss_pred ceeecCCChhHHHHHHHHHHhhhchhhhhHhH--HHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHHHHHHHc
Q 040505 149 SIAVVPWGQQWKKMRKVVASHVLHSVRLDSLL--VKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMF 226 (228)
Q Consensus 149 ~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~dii~~~~f 226 (228)
+++.+|+.|+++||.+++.| +.++++.+. +.+++..+.+++.+.+.++.+ .+.++|+.++++++++|+|++++|
T Consensus 123 --i~~~~g~~wk~~Rk~l~~~f-s~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~vd~~~~~~~~t~dvi~~~~f 198 (502)
T PLN02426 123 --IFNVDGDSWRFQRKMASLEL-GSVSIRSYAFEIVASEIESRLLPLLSSAADDG-EGAVLDLQDVFRRFSFDNICKFSF 198 (502)
T ss_pred --eeecCcHHHHHHHHHhHhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCceEcHHHHHHHHHHHHHHHHHh
Confidence 66777999999999999999 777787763 677888888988887654322 245799999999999999999999
Q ss_pred CC
Q 040505 227 SR 228 (228)
Q Consensus 227 G~ 228 (228)
|.
T Consensus 199 G~ 200 (502)
T PLN02426 199 GL 200 (502)
T ss_pred CC
Confidence 94
No 31
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.39 E-value=9.5e-12 Score=99.41 Aligned_cols=124 Identities=15% Similarity=0.108 Sum_probs=96.9
Q ss_pred CCCCCCCC-cccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCc--hhh
Q 040505 63 PLPPGPAP-WPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPL--TMG 139 (228)
Q Consensus 63 ~~pPgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~--~~~ 139 (228)
..||--++ +|++|++..++++. ..++++..+|||+ ||++.++|+.+.++.+|+....++..+....+-... ...
T Consensus 31 ~~PPli~gwiP~lG~a~~fgk~P--~eFl~~~~~K~Gd-VFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~ 107 (486)
T KOG0684|consen 31 KEPPLIKGWIPWLGSALAFGKDP--LEFLRECRKKYGD-VFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLT 107 (486)
T ss_pred CCCcccccCcchhhHHHHhccCH--HHHHHHHHHhcCC-eEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhh
Confidence 45676665 79999999996554 8999999999998 999999999999999999999999655333321111 123
Q ss_pred hhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHH
Q 040505 140 TEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSF 193 (228)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~ 193 (228)
...+|.+ ++....+....++.+.+..++ ...+++++.+.|.++..+..+.
T Consensus 108 ~~vFg~~---v~~d~~~~~~~e~~~~~k~~L-~~~~lk~~~e~m~~el~~~f~~ 157 (486)
T KOG0684|consen 108 TPVFGKG---VVYDVPNHVMMEQKKFFKSAL-GGVALKSLVELMLEELHAYFET 157 (486)
T ss_pred hhhcCCC---ccccCCCchHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHhc
Confidence 3445555 466666778889999998988 7888999999999999888777
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.99 E-value=3.8e-09 Score=86.96 Aligned_cols=126 Identities=19% Similarity=0.107 Sum_probs=94.6
Q ss_pred HHHHHHHHHhCCceEEEEecCee--EEEEcCHHHHHHHHHhcCCCCCCCCch---h--hhhhccCCccceeecCCChhHH
Q 040505 88 KWIHGLMRELNTNICCIRLGNVH--VIPVTSPEIALEFLKVHDSVFASRPLT---M--GTEYLSGGFLSIAVVPWGQQWK 160 (228)
Q Consensus 88 ~~~~~~~~kyG~~v~~~~~~~~~--~v~i~~p~~~~~vl~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~g~~w~ 160 (228)
.....+.+.||. +..+...+.. .+++++++.+++++.++. .+++.... . ....++.+ .++..+|+.|.
T Consensus 26 ~~~~~~~~p~~~-~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~ll~~dg~~H~ 100 (411)
T COG2124 26 FFLERAEDPYGD-YFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDG---SLLTLDGPEHT 100 (411)
T ss_pred hhHHHHhCCCch-hhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhcccc---ceeecCCHHHH
Confidence 345567778886 7777665433 789999999999997653 12221111 1 12333333 26667799999
Q ss_pred HHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHHHHHHHcC
Q 040505 161 KMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMFS 227 (228)
Q Consensus 161 ~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~dii~~~~fG 227 (228)
++||+++++| +++.++.+.+.+.+.++++++.+ ... ..+++.+....+++++|+ .+||
T Consensus 101 r~Rkl~~~~F-~~~~~~~~~~~i~~~~~~~~~~~-~~~------~~~~v~~~a~~l~~~vi~-~l~G 158 (411)
T COG2124 101 RLRKLLAPAF-TPRALRGYRPLIREIADRLLDDL-WQG------GADLVLDFAAELTLRVIA-ELLG 158 (411)
T ss_pred HHHHHhcccc-CHHHHHHHHHHHHHHHHHHHHhc-ccC------CchhHHHHhhhhhHHHHH-HHhC
Confidence 9999999999 89999999999999999999988 221 277899999999999999 8888
No 33
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=81.71 E-value=9 Score=25.10 Aligned_cols=64 Identities=20% Similarity=0.161 Sum_probs=45.1
Q ss_pred cCCCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecC------eeEEEEcCHHHHHHHHHh
Q 040505 58 RNKRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGN------VHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 58 ~~~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~------~~~v~i~~p~~~~~vl~~ 126 (228)
++.+.++||.-..+-++-|++.-.. .+-+.++..+||+ |.++++|. +-+|+-.|-..++....+
T Consensus 7 ~~~~~rlppevnriLyirNLp~~IT----seemydlFGkyg~-IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh 76 (124)
T KOG0114|consen 7 KKQNIRLPPEVNRILYIRNLPFKIT----SEEMYDLFGKYGT-IRQIRIGNTKETRGTAFVVYEDIFDAKKACDH 76 (124)
T ss_pred ccCCCCCChhhheeEEEecCCcccc----HHHHHHHhhcccc-eEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence 4456667776666666777664322 4568899999999 99999863 457777787777777744
No 34
>PF13625 Helicase_C_3: Helicase conserved C-terminal domain
Probab=51.68 E-value=49 Score=22.43 Aligned_cols=38 Identities=16% Similarity=0.182 Sum_probs=28.6
Q ss_pred chHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHh
Q 040505 86 TFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 86 ~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~ 126 (228)
+...+.+|.++||. + ++.- +...+.+.|++.++++...
T Consensus 76 v~~~i~~w~~~~g~-v-~l~~-~~~~l~~~d~~~l~~l~~~ 113 (129)
T PF13625_consen 76 VEQSIEDWARRYGR-V-RLYK-GAYLLECDDPELLDELLAD 113 (129)
T ss_pred HHHHHHHHHHhcCC-E-EEec-CeEEEEECCHHHHHHHHhC
Confidence 35678999999997 4 3322 3567789999999999843
No 35
>PF14164 YqzH: YqzH-like protein
Probab=45.66 E-value=59 Score=19.19 Aligned_cols=41 Identities=15% Similarity=0.084 Sum_probs=25.5
Q ss_pred HhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHHH
Q 040505 178 SLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVI 221 (228)
Q Consensus 178 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~dii 221 (228)
...|.-.++-+.|.+.+.....+.. ..|+++.+...+.+.|
T Consensus 22 ~~~pls~~E~~~L~~~i~~~~~~~~---~~Dl~eiVeDvVY~yi 62 (64)
T PF14164_consen 22 ECMPLSDEEWEELCKHIQERKNEEP---DEDLHEIVEDVVYDYI 62 (64)
T ss_pred cCCCCCHHHHHHHHHHHHHHHhcCC---CchHHHHHHHHHHHHh
Confidence 4455666667777777655433322 5688887777776655
No 36
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=42.74 E-value=75 Score=20.99 Aligned_cols=12 Identities=25% Similarity=0.113 Sum_probs=8.9
Q ss_pred Cccccccccccc
Q 040505 70 PWPIVGSLPEMW 81 (228)
Q Consensus 70 ~~p~~G~~~~~~ 81 (228)
..|++||+....
T Consensus 45 ~~p~YgNL~~~q 56 (107)
T PF15330_consen 45 DDPCYGNLELQQ 56 (107)
T ss_pred CCcccccccccc
Confidence 478899987653
No 37
>PHA01327 hypothetical protein
Probab=30.59 E-value=27 Score=18.42 Aligned_cols=19 Identities=11% Similarity=0.492 Sum_probs=14.5
Q ss_pred eecCCChhHHHHHHHHHHh
Q 040505 151 AVVPWGQQWKKMRKVVASH 169 (228)
Q Consensus 151 ~~~~~g~~w~~~R~~~~~~ 169 (228)
+.+..|++|.+.|..+.+-
T Consensus 14 vinehge~wqer~drmkkr 32 (49)
T PHA01327 14 VINEHGEEWQERKDRMKKR 32 (49)
T ss_pred HHHhhHHHHHHHHHHHHHH
Confidence 6667799999988776553
No 38
>PF13893 RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=30.50 E-value=1e+02 Score=16.95 Aligned_cols=35 Identities=14% Similarity=0.129 Sum_probs=25.1
Q ss_pred HHHHHHhCCceEEEEecC----eeEEEEcCHHHHHHHHHh
Q 040505 91 HGLMRELNTNICCIRLGN----VHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 91 ~~~~~kyG~~v~~~~~~~----~~~v~i~~p~~~~~vl~~ 126 (228)
.+.-++||+ |-.+.+.. .-.|-..+++.++.....
T Consensus 2 ~~~f~~fG~-V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~ 40 (56)
T PF13893_consen 2 YKLFSKFGE-VKKIKIFKKKRGFAFVEFASVEDAQKAIEQ 40 (56)
T ss_dssp HHHHTTTS--EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred hHHhCCccc-EEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 466789998 88888643 345667799998888853
No 39
>cd08780 Death_TRADD Death Domain of Tumor Necrosis Factor Receptor 1-Associated Death Domain protein. Death domain (DD) of TRADD (TNF Receptor 1-Associated Death Domain or TNFRSF1A-associated via death domain) protein. TRADD is a central signaling adaptor for TNF-receptor 1 (TNFR1), mediating activation of Nuclear Factor -kappaB (NF-kB) and c-Jun N-terminal kinase (JNK), as well as caspase-dependent apoptosis. It also carries important immunological roles including germinal center formation, DR3-mediated T-cell stimulation, and TNFalpha-mediated inflammatory responses. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into s
Probab=27.87 E-value=1.7e+02 Score=18.66 Aligned_cols=69 Identities=12% Similarity=0.171 Sum_probs=41.4
Q ss_pred ChhHHHHHHHHHH---hhhchhhhhHh----HHH-HHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHHHHHHHcC
Q 040505 156 GQQWKKMRKVVAS---HVLHSVRLDSL----LVK-RREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMFS 227 (228)
Q Consensus 156 g~~w~~~R~~~~~---~f~~~~~l~~~----~~~-~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~dii~~~~fG 227 (228)
|.+|+..=|.+.. ++ +...++.. ..- +.+.+-+++..|....... -..-.+...+..+-++.+++-++|
T Consensus 13 Gr~WK~laR~Lg~~cral-~d~~ID~I~~~y~r~gL~EqvyQ~L~~W~~~eg~~--Atv~~Lv~AL~~c~l~~lAe~l~~ 89 (90)
T cd08780 13 GKKWKPVGRSLQKNCRAL-RDPAIDNLAYEYDREGLYEQAYQLLRRFIQSEGKK--ATLQRLVQALEENGLTSLAEDLLG 89 (90)
T ss_pred hHHHHHHHHHHccccccc-chhHHHHHHhhcccccHHHHHHHHHHHHHHhcccc--chHHHHHHHHHHccchHHHHHHhc
Confidence 7889987666652 24 44444433 323 7788888889987653221 112345666666667766666554
No 40
>PF14198 TnpV: Transposon-encoded protein TnpV
Probab=25.87 E-value=2.1e+02 Score=19.05 Aligned_cols=59 Identities=19% Similarity=0.170 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCC-C---ccccHHHHHHHHH
Q 040505 159 WKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNV-D---SVINVRLVARRYC 217 (228)
Q Consensus 159 w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~-~---~~~d~~~~~~~~t 217 (228)
+++++...-..+...+.+..+...+++++.+.++.+.+......+ . ..-|...|++++.
T Consensus 34 Lke~~p~~Y~~ll~~g~L~~~l~eid~~A~e~~e~l~~q~~~~~gvtE~LK~~dqm~wv~~mN 96 (111)
T PF14198_consen 34 LKEHKPILYNNLLLSGKLNEHLAEIDEQAQERFERLVEQMAEKEGVTEELKAEDQMEWVRRMN 96 (111)
T ss_pred HHHhHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHhhhhcCHHHHHHHHH
Confidence 444454444444455667778888888888888777544322111 1 2346677776543
No 41
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=23.53 E-value=2.6e+02 Score=19.40 Aligned_cols=49 Identities=6% Similarity=0.007 Sum_probs=34.5
Q ss_pred cccccccccCCCCchHHHHHHHHHhCCceEEEEec---------CeeEEEEcCHHHHHHHHHh
Q 040505 73 IVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG---------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 73 ~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~---------~~~~v~i~~p~~~~~vl~~ 126 (228)
+++++..-. . ...+.++-++||+ |..+.+. +--.|-..+++.++..+..
T Consensus 38 fVgnL~~~~---t-e~~L~~~F~~~G~-I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~ 95 (144)
T PLN03134 38 FIGGLSWGT---D-DASLRDAFAHFGD-VVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 (144)
T ss_pred EEeCCCCCC---C-HHHHHHHHhcCCC-eEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 456555332 2 5678899999998 8776652 2346778899999999954
No 42
>KOG0107 consensus Alternative splicing factor SRp20/9G8 (RRM superfamily) [RNA processing and modification]
Probab=23.31 E-value=2e+02 Score=21.09 Aligned_cols=48 Identities=10% Similarity=0.128 Sum_probs=32.7
Q ss_pred ccccccccccCCCCchHHHHHHHHHhCCceEEEEec----CeeEEEEcCHHHHHHHH
Q 040505 72 PIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG----NVHVIPVTSPEIALEFL 124 (228)
Q Consensus 72 p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~----~~~~v~i~~p~~~~~vl 124 (228)
-++|||..-.. ..-++....+||+ +..+|+. +.-+|=.-||..+++..
T Consensus 13 VYVGnL~~~a~----k~eLE~~F~~yG~-lrsvWvArnPPGfAFVEFed~RDA~DAv 64 (195)
T KOG0107|consen 13 VYVGNLGSRAT----KRELERAFSKYGP-LRSVWVARNPPGFAFVEFEDPRDAEDAV 64 (195)
T ss_pred EEeccCCCCcc----hHHHHHHHHhcCc-ceeEEEeecCCCceEEeccCcccHHHHH
Confidence 35787764322 3447888899998 9988873 34567777887766655
No 43
>KOG0109 consensus RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains [RNA processing and modification; General function prediction only]
Probab=22.69 E-value=1.7e+02 Score=23.28 Aligned_cols=48 Identities=15% Similarity=0.234 Sum_probs=33.4
Q ss_pred cccccccccCCCCchHHHHHHHHHhCCceEEEEec-CeeEEEEcCHHHHHHHHH
Q 040505 73 IVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG-NVHVIPVTSPEIALEFLK 125 (228)
Q Consensus 73 ~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~-~~~~v~i~~p~~~~~vl~ 125 (228)
++||++.-. -+.-++.+.++||. |..+.+- +--+|.|-|-...+++..
T Consensus 6 FIGNLp~~~----~~~elr~lFe~ygk-VlECDIvKNYgFVHiEdktaaedair 54 (346)
T KOG0109|consen 6 FIGNLPREA----TEQELRSLFEQYGK-VLECDIVKNYGFVHIEDKTAAEDAIR 54 (346)
T ss_pred hccCCCccc----chHHHHHHHHhhCc-eEeeeeecccceEEeecccccHHHHh
Confidence 678877532 25668899999998 8777653 234678877777776664
Done!