Query 040505
Match_columns 228
No_of_seqs 159 out of 2075
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 14:35:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040505.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040505hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swz_A Steroid 17-alpha-hydrox 99.9 1.2E-26 4E-31 193.5 15.4 163 59-228 4-168 (494)
2 3nxu_A Cytochrome P450 3A4; al 99.9 2E-25 7E-30 185.5 16.5 153 65-228 16-169 (485)
3 3pm0_A Cypib1, cytochrome P450 99.9 2.6E-25 9E-30 185.7 14.6 162 59-228 5-172 (507)
4 3tbg_A Cytochrome P450 2D6; mo 99.9 6.4E-25 2.2E-29 182.1 16.1 161 60-228 7-171 (479)
5 3s79_A Cytochrome P450 19A1; o 99.9 3E-25 1E-29 185.3 11.7 162 60-228 42-206 (503)
6 3e6i_A CYPIIE1, P450-J, cytoch 99.9 2E-24 6.8E-29 179.1 16.5 159 59-228 6-166 (476)
7 3k9v_A 1,25-dihydroxyvitamin D 99.9 1.4E-24 4.7E-29 180.2 14.9 164 60-228 21-190 (482)
8 1po5_A Cytochrome P450 2B4; ox 99.9 2.5E-23 8.6E-28 172.7 16.5 159 60-228 7-167 (476)
9 3qz1_A Steroid 21-hydroxylase; 99.9 1.3E-24 4.5E-29 181.1 8.7 155 60-228 26-180 (496)
10 2hi4_A Cytochrome P450 1A2; CY 99.9 2.2E-23 7.4E-28 173.9 15.5 162 60-228 13-183 (495)
11 2fdv_A Cytochrome P450 2A6; CY 99.9 2.2E-23 7.6E-28 173.1 15.2 159 60-228 7-167 (476)
12 3czh_A Cytochrome P450 2R1; vi 99.9 1.9E-23 6.5E-28 173.7 14.2 161 60-228 9-172 (481)
13 1r9o_A Cytochrome P450 2C9; mo 99.9 1.9E-23 6.6E-28 173.4 12.2 159 60-228 8-168 (477)
14 3n9y_A Cholesterol SIDE-chain 99.9 7.2E-23 2.5E-27 170.3 13.2 166 59-228 5-177 (487)
15 2ve3_A Putative cytochrome P45 99.9 1.8E-22 6.2E-27 166.2 12.8 153 60-227 9-161 (444)
16 3ld6_A Lanosterol 14-alpha dem 99.9 8.6E-23 3E-27 168.8 10.3 154 61-228 9-165 (461)
17 2ij2_A Cytochrome P450 BM3; mo 99.9 4.5E-22 1.5E-26 165.0 14.5 153 64-228 4-160 (470)
18 3gw9_A Sterol 14alpha-demethyl 99.9 1.5E-22 5.2E-27 166.6 9.9 154 62-228 2-159 (450)
19 3i3k_A Lanosterol 14-alpha dem 99.9 8.3E-22 2.8E-26 162.9 10.3 154 60-227 8-164 (461)
20 2cib_A Cytochrome P450 51; hem 99.8 5E-21 1.7E-25 158.1 11.5 150 63-228 4-155 (455)
21 3v8d_A Cholesterol 7-alpha-mon 99.8 1.5E-21 5.1E-26 162.6 6.8 163 59-228 9-173 (491)
22 3dbg_A Putative cytochrome P45 99.8 5.5E-21 1.9E-25 158.3 9.3 150 62-228 22-173 (467)
23 2cd8_A Cytochrome P450 monooxy 99.8 4.9E-20 1.7E-24 151.4 10.6 155 60-228 23-183 (436)
24 3dsk_A Cytochrome P450 74A, ch 99.8 1.3E-19 4.3E-24 151.1 10.4 165 58-228 23-201 (495)
25 3mdm_A Cholesterol 24-hydroxyl 99.8 5.5E-19 1.9E-23 145.7 12.3 138 84-228 10-151 (456)
26 1n97_A CYP175A1; electron tran 99.8 5.7E-20 2E-24 148.9 5.6 143 67-228 3-147 (389)
27 3dax_A Cytochrome P450 7A1; ch 99.8 2.3E-19 7.8E-24 149.3 8.0 162 60-228 10-173 (491)
28 1jfb_A Nitric-oxide reductase 99.8 3.7E-18 1.3E-22 138.8 13.6 153 64-228 2-160 (404)
29 3dan_A Cytochrome P450 74A2; A 99.7 6.9E-18 2.3E-22 139.7 11.4 164 59-228 5-183 (473)
30 1izo_A P450bsbeta, cytochrome 99.7 1.9E-17 6.5E-22 135.2 12.7 141 71-228 8-152 (417)
31 3b6h_A Prostacyclin synthase; 99.7 8.1E-18 2.8E-22 140.2 10.3 156 60-228 15-173 (498)
32 3awm_A Fatty acid alpha-hydrox 99.7 2.9E-17 1E-21 134.0 12.7 144 65-228 4-151 (415)
33 1ued_A P450 OXYC, P450 monooxy 99.7 3.4E-17 1.2E-21 133.3 12.5 147 60-228 7-167 (406)
34 3b98_A Prostaglandin I2 syntha 99.7 7.7E-18 2.6E-22 139.5 6.8 155 60-227 15-172 (475)
35 2zbx_A Cytochrome P450-SU1; be 99.7 3E-16 1E-20 127.9 13.8 152 62-228 4-165 (412)
36 1s1f_A Putative cytochrome P45 99.6 3.1E-15 1.1E-19 121.7 14.8 148 63-228 8-163 (406)
37 2zwu_A Camphor 5-monooxygenase 99.6 1.1E-15 3.6E-20 124.8 11.8 155 58-228 6-170 (415)
38 3ivy_A Cytochrome P450 CYP125; 99.6 3.3E-15 1.1E-19 122.6 13.6 153 60-227 15-184 (433)
39 1cpt_A Cytochrome P450-TERP; o 99.6 1.9E-15 6.4E-20 123.8 10.1 151 61-228 4-172 (428)
40 3abb_A CYP105D6, cytochrome P4 99.6 5.6E-15 1.9E-19 120.3 12.8 130 86-228 26-164 (408)
41 2jjn_A Cytochrome P450 113A1; 99.6 3E-15 1E-19 122.0 10.4 138 60-228 16-154 (411)
42 3oo3_A OXY protein; cytochrome 99.6 5.8E-15 2E-19 119.2 11.5 132 86-228 14-149 (384)
43 3ejb_B Biotin biosynthesis cyt 99.6 2E-14 6.7E-19 116.9 12.8 125 87-227 16-148 (404)
44 3aba_A Cytochrome P450; oxidor 99.6 2.4E-14 8.1E-19 116.4 13.0 129 87-228 22-157 (403)
45 3a4g_A Vitamin D hydroxylase; 99.6 2.4E-14 8.3E-19 116.6 12.4 129 86-228 22-156 (411)
46 3tyw_A Putative cytochrome P45 99.6 3.2E-14 1.1E-18 116.2 13.0 130 86-228 31-169 (417)
47 1z8o_A 6-deoxyerythronolide B 99.6 1.7E-14 5.7E-19 117.3 11.3 126 86-228 16-159 (404)
48 2wm5_A CYP124, putative cytoch 99.6 1.9E-14 6.7E-19 118.0 11.3 133 86-228 46-189 (435)
49 2y5n_A MYCG, P-450-like protei 99.6 4.2E-14 1.5E-18 115.4 12.6 130 86-228 39-173 (417)
50 1odo_A Putative cytochrome P45 99.6 2.1E-14 7.3E-19 116.8 10.6 132 86-228 17-159 (408)
51 2dkk_A Cytochrome P450; CYP158 99.5 4.2E-14 1.4E-18 115.2 11.9 133 83-228 26-166 (411)
52 2z36_A MOXA, cytochrome P450 t 99.5 6.3E-14 2.2E-18 114.3 11.9 132 86-228 24-166 (413)
53 2xbk_A PIMD protein; epoxidati 99.5 1.4E-13 4.9E-18 111.8 13.6 129 87-228 29-167 (404)
54 4fb2_A P450CIN; heme, monooxyg 99.5 1.7E-14 5.8E-19 117.0 7.1 130 86-228 21-153 (398)
55 3tkt_A Cytochrome P450; aromat 99.5 9.2E-14 3.2E-18 114.5 10.9 131 87-228 48-194 (450)
56 2z3t_A Cytochrome P450; monoxy 99.5 2.4E-13 8.1E-18 111.3 12.3 126 87-228 23-167 (425)
57 1gwi_A CYP154C1, cytochrome P4 99.5 1E-13 3.5E-18 112.9 9.7 130 86-228 19-162 (411)
58 2xkr_A CYP142, putative cytoch 99.5 8.1E-14 2.8E-18 113.1 9.0 124 86-228 20-144 (398)
59 2uuq_A CYP130, cytochrome P450 99.5 2E-13 6.9E-18 111.3 10.4 128 86-228 27-165 (414)
60 1q5d_A P450 epoxidase; cytochr 99.5 1.1E-13 3.7E-18 113.1 8.2 127 86-228 28-164 (419)
61 3buj_A CALO2; heme, iron, meta 99.4 5.5E-13 1.9E-17 108.1 10.2 125 87-228 16-148 (397)
62 1io7_A Cytochrome P450 CYP119; 99.4 5.9E-13 2E-17 106.9 9.4 124 87-228 2-136 (368)
63 1lfk_A OXYB, P450 monooxygenas 99.4 7.5E-13 2.6E-17 107.3 9.8 125 91-228 20-158 (398)
64 3mgx_A Putative P450 monooxyge 99.4 2.2E-13 7.6E-18 111.1 6.6 131 85-227 38-174 (415)
65 1n40_A P450 MT2, cytochrome P4 99.4 3.5E-13 1.2E-17 109.3 7.6 126 86-228 18-152 (396)
66 2rfb_A Cytochrome P450; heme, 99.4 6E-13 2E-17 105.9 6.9 110 95-228 2-113 (343)
67 3nc3_A Cytochrome P450 CYPX; c 99.4 4.4E-13 1.5E-17 110.2 5.8 125 87-228 56-182 (441)
68 3r9b_A Cytochrome P450 164A2; 99.4 3.4E-12 1.2E-16 104.1 10.9 126 86-228 31-165 (418)
69 3lxh_A Cytochrome P450; heme, 99.4 2.3E-12 8E-17 105.2 9.9 129 86-227 40-170 (421)
70 3oft_A Cytochrome P450, CYP101 99.4 1.8E-12 6.1E-17 105.0 8.4 129 85-227 25-154 (396)
71 3rwl_A Cytochrome P450 alkane 99.3 1E-11 3.4E-16 101.6 12.6 130 85-227 39-179 (426)
72 3b4x_A 367AA long hypothetical 99.3 2.4E-12 8.4E-17 103.3 8.4 121 87-228 2-133 (367)
73 2wiy_A XPLA-heme, cytochrome P 99.2 4.5E-11 1.5E-15 96.8 8.5 125 87-228 23-148 (394)
74 3p3o_A Cytochrome P450; monoox 99.2 1E-11 3.5E-16 101.3 3.5 121 87-227 36-167 (416)
75 4dnj_A Putative cytochrome P45 99.1 7.8E-10 2.7E-14 90.0 9.9 127 87-225 37-167 (412)
76 4dxy_A Cytochrome P450, CYP101 98.5 5E-07 1.7E-11 73.6 9.6 127 87-224 40-167 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 98.0 9.5E-09 3.3E-13 82.6 -11.6 129 64-228 35-177 (381)
78 2diu_A KIAA0430 protein; struc 76.1 5.5 0.00019 24.8 4.6 53 72-126 12-65 (96)
79 1s79_A Lupus LA protein; RRM, 56.6 32 0.0011 21.2 6.6 50 72-126 14-71 (103)
80 3lqv_A PRE-mRNA branch site pr 56.0 34 0.0012 21.3 8.1 57 65-126 4-66 (115)
81 2dgx_A KIAA0430 protein; RRM d 55.3 28 0.00097 20.9 5.0 50 72-126 12-71 (96)
82 1iqt_A AUF1, heterogeneous nuc 54.9 26 0.0009 19.7 4.8 40 87-127 13-61 (75)
83 3d2w_A TAR DNA-binding protein 49.0 40 0.0014 20.0 5.5 50 69-123 11-64 (89)
84 2mss_A Protein (musashi1); RNA 42.3 45 0.0015 18.7 4.9 38 87-125 13-59 (75)
85 1nu4_A U1A RNA binding domain; 41.9 48 0.0016 19.7 4.5 55 71-126 10-70 (97)
86 3beg_B Splicing factor, argini 40.2 67 0.0023 20.1 6.1 50 72-126 19-70 (115)
87 2kxn_B Transformer-2 protein h 37.1 82 0.0028 20.2 7.7 52 70-126 47-107 (129)
88 2krb_A Eukaryotic translation 33.6 69 0.0023 18.3 5.7 39 87-126 21-66 (81)
89 4f25_A Polyadenylate-binding p 32.2 92 0.0032 19.3 5.8 49 73-126 9-64 (115)
90 4fxv_A ELAV-like protein 1; RN 32.0 86 0.0029 18.9 5.5 49 73-126 23-80 (99)
91 1x4e_A RNA binding motif, sing 30.9 78 0.0027 18.1 4.9 50 71-125 7-65 (85)
92 2cqc_A Arginine/serine-rich sp 30.2 86 0.0029 18.4 7.2 56 66-126 12-76 (95)
93 2a3j_A U1 small nuclear ribonu 30.2 1.1E+02 0.0038 19.7 7.0 54 72-126 32-91 (127)
94 3ctr_A Poly(A)-specific ribonu 29.8 46 0.0016 20.8 2.8 49 87-136 19-70 (101)
95 2dgu_A Heterogeneous nuclear r 29.3 96 0.0033 18.6 6.8 51 71-126 13-64 (103)
96 1whv_A Poly(A)-specific ribonu 28.2 1.1E+02 0.0038 19.0 5.6 47 87-134 29-78 (100)
97 1sjr_A Polypyrimidine tract-bi 28.1 1.5E+02 0.005 20.3 7.3 49 73-126 50-103 (164)
98 2kvi_A Nuclear polyadenylated 27.6 1E+02 0.0034 18.3 6.3 50 72-126 13-64 (96)
99 1x4d_A Matrin 3; structural ge 27.1 1.1E+02 0.0039 18.7 5.9 56 67-126 13-71 (102)
100 3s6e_A RNA-binding protein 39; 26.8 64 0.0022 20.4 3.3 61 65-126 3-74 (114)
101 3s8s_A Histone-lysine N-methyl 26.8 1.2E+02 0.004 18.8 5.8 50 72-126 9-67 (110)
102 2hvz_A Splicing factor, argini 26.1 1.1E+02 0.0037 18.2 6.0 39 87-126 14-56 (101)
103 2cpf_A RNA binding motif prote 26.0 1.1E+02 0.0037 18.1 5.9 50 72-126 8-69 (98)
104 1sjq_A Polypyrimidine tract-bi 25.7 1.3E+02 0.0043 18.8 7.4 54 68-126 15-71 (105)
105 1x4c_A Splicing factor, argini 24.7 1.2E+02 0.0042 18.4 7.7 50 72-126 18-69 (108)
106 2d9p_A Polyadenylate-binding p 24.7 1.2E+02 0.004 18.1 6.1 54 68-126 14-74 (103)
107 3s7r_A Heterogeneous nuclear r 24.0 1.1E+02 0.0038 17.5 4.2 51 71-126 13-72 (87)
108 1whx_A Hypothetical protein ri 23.9 1.3E+02 0.0046 18.5 6.4 58 72-134 13-74 (111)
109 2cq4_A RNA binding motif prote 23.5 1.3E+02 0.0046 18.3 4.5 47 73-124 29-84 (114)
110 3zzy_A Polypyrimidine tract-bi 23.3 1.6E+02 0.0055 19.2 5.2 49 73-126 32-85 (130)
111 2la6_A RNA-binding protein FUS 22.5 1.3E+02 0.0044 17.8 6.6 56 66-126 10-82 (99)
112 2ad9_A Polypyrimidine tract-bi 22.3 1.6E+02 0.0054 18.8 6.1 50 71-125 33-85 (119)
113 2dhg_A TRNA selenocysteine ass 22.1 1.4E+02 0.0046 17.9 7.5 55 67-126 7-70 (104)
114 2jwn_A Embryonic polyadenylate 22.0 1.5E+02 0.0052 18.4 5.4 47 73-124 40-95 (124)
115 1uaw_A Mouse-musashi-1; RNP-ty 21.9 1.1E+02 0.0038 16.9 3.7 40 87-127 14-62 (77)
116 2fy1_A RNA-binding motif prote 21.7 1.5E+02 0.0052 18.3 5.1 50 72-126 10-67 (116)
117 1whw_A Hypothetical protein ri 21.3 1.4E+02 0.0047 17.6 6.4 50 72-126 11-69 (99)
118 3bs9_A Nucleolysin TIA-1 isofo 21.3 1.2E+02 0.0043 17.2 5.1 50 72-126 9-67 (87)
119 2dnz_A Probable RNA-binding pr 21.1 1.3E+02 0.0046 17.5 7.5 51 71-126 7-66 (95)
120 2nlw_A Eukaryotic translation 20.6 1.5E+02 0.0052 17.9 6.4 55 71-126 17-80 (105)
121 2do4_A Squamous cell carcinoma 20.5 1.4E+02 0.0049 17.6 7.0 51 71-126 19-77 (100)
122 2err_A Ataxin-2-binding protei 20.5 1.2E+02 0.004 18.6 3.6 50 72-126 32-88 (109)
123 3ucg_A Polyadenylate-binding p 20.1 1.4E+02 0.0047 17.1 4.4 47 73-124 10-65 (89)
No 1
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=99.94 E-value=1.2e-26 Score=193.53 Aligned_cols=163 Identities=21% Similarity=0.256 Sum_probs=133.0
Q ss_pred CCCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh
Q 040505 59 NKRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTM 138 (228)
Q Consensus 59 ~~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~ 138 (228)
++..+.||||+++|++||++++...+..+..+.+|+++||+ |+++++|+.+.|+++||+++++++.+++..|.+++...
T Consensus 4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~-i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~ 82 (494)
T 3swz_A 4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGP-IYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMA 82 (494)
T ss_dssp --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCH
T ss_pred CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCC-EEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcH
Confidence 35667899999999999999886655557889999999998 99999999999999999999999998888898888665
Q ss_pred hhhhccCCccceeecCCChhHHHHHHHHHHhhhch--hhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHH
Q 040505 139 GTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHS--VRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRY 216 (228)
Q Consensus 139 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~--~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~ 216 (228)
..+.++.++.+++++.+|+.|+++||++.++| +. ...+.+.+.+.++++.+++.|.+. .+.++|+.+++..+
T Consensus 83 ~~~~~~~~~~gl~~~~~g~~wr~~Rr~~~~~f-~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~vd~~~~~~~~ 156 (494)
T 3swz_A 83 TLDIASNNRKGIAFADSGAHWQLHRRLAMATF-ALFKDGDQKLEKIICQEISTLCDMLATH-----NGQSIDISFPVFVA 156 (494)
T ss_dssp HHHHHTTTTCSSSSSCSSHHHHHHHHHHHHHT-TTTSSSTTCHHHHHHHHHHHHHHHHHHT-----TTEEECCHHHHHHH
T ss_pred HHHHhccCCCCeEeCCCCHHHHHHHHHHHHHH-HHhcchHHHHHHHHHHHHHHHHHHHHHc-----CCCcccHHHHHHHH
Confidence 55555554456667777999999999999998 42 346789999999999999998653 33489999999999
Q ss_pred HHHHHHHHHcCC
Q 040505 217 CGNVIRKIMFSR 228 (228)
Q Consensus 217 t~dii~~~~fG~ 228 (228)
++|+|+.++||.
T Consensus 157 t~dvi~~~~fG~ 168 (494)
T 3swz_A 157 VTNVISLICFNT 168 (494)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHHcCC
Confidence 999999999994
No 2
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.93 E-value=2e-25 Score=185.52 Aligned_cols=153 Identities=18% Similarity=0.304 Sum_probs=129.9
Q ss_pred CCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhc-CCCCCCCCchhhhhhc
Q 040505 65 PPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVH-DSVFASRPLTMGTEYL 143 (228)
Q Consensus 65 pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~-~~~~~~~~~~~~~~~~ 143 (228)
+|||+++|++||++++.+ ..+.++.+|+++||+ |+++++++.+.|+++||+.+++++.++ ...|.+++.......+
T Consensus 16 ~PGP~~~PliGn~~~~~~--~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~~~ 92 (485)
T 3nxu_A 16 IPGPTPLPFLGNILSYHK--GFCMFDMECHKKYGK-VWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFM 92 (485)
T ss_dssp CCCCCCBTTTBTGGGGGG--CHHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCGGG
T ss_pred CCCCCCcCeecCcHHhhc--ChHHHHHHHHHHcCC-eEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccccccc
Confidence 799999999999999854 347788999999998 999999999999999999999999776 4566665543333333
Q ss_pred cCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHHHHH
Q 040505 144 SGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRK 223 (228)
Q Consensus 144 ~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~dii~~ 223 (228)
+.+ ++..+|+.|+++||+++++| +.++++.+.+.+.++++++++.+.+..+.++ ++|+.+++..+++|+|+.
T Consensus 93 ~~~----l~~~~g~~w~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~---~~d~~~~~~~~~~dvi~~ 164 (485)
T 3nxu_A 93 KSA----ISIAEDEEWKRLRSLLSPTF-TSGKLKEMVPIIAQYGDVLVRNLRREAETGK---PVTLKDVFGAYSMDVITS 164 (485)
T ss_dssp GGS----TTTCCHHHHHHHHHHHGGGG-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CEEHHHHHHHHHHHHHHH
T ss_pred ccC----ccccCCcHHHHHHhhcChhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhccCC---cCcHHHHHHHHHHHHHHH
Confidence 333 56667999999999999999 8999999999999999999999987655443 899999999999999999
Q ss_pred HHcCC
Q 040505 224 IMFSR 228 (228)
Q Consensus 224 ~~fG~ 228 (228)
++||.
T Consensus 165 ~~fG~ 169 (485)
T 3nxu_A 165 TSFGV 169 (485)
T ss_dssp HHHSC
T ss_pred HHcCC
Confidence 99994
No 3
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=99.93 E-value=2.6e-25 Score=185.75 Aligned_cols=162 Identities=24% Similarity=0.383 Sum_probs=113.3
Q ss_pred CCCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh
Q 040505 59 NKRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTM 138 (228)
Q Consensus 59 ~~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~ 138 (228)
+++.+.||||+++|++||++++.+ ..+..+.+|+++||+ |+++++++.+.++++||+++++++.+++..|.+++...
T Consensus 5 ~~~~~~pPgP~~~P~iG~~~~~~~--~~~~~~~~~~~~yG~-i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~ 81 (507)
T 3pm0_A 5 TSSKGKPPGPFAWPLIGNAAAVGQ--AAHLSFARLARRYGD-VFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFA 81 (507)
T ss_dssp -----------------------C--CHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCH
T ss_pred cCCCCCCcCCCCCCeeCchhhcCc--cHHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcch
Confidence 356678999999999999998853 347889999999998 99999999999999999999999988878887776554
Q ss_pred hhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhh------hHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHH
Q 040505 139 GTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRL------DSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLV 212 (228)
Q Consensus 139 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~ 212 (228)
....+..+ .+++++.+|+.|+++|+++.+.| +.... +.+.+.+.++++++++.+.+..+.+ .++|+.++
T Consensus 82 ~~~~~~~g-~~l~~~~~g~~w~~~R~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~---~~vd~~~~ 156 (507)
T 3pm0_A 82 SFRVVSGG-RSMAFGHYSEHWKVQRRAAHSMM-RNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADG---AFLDPRPL 156 (507)
T ss_dssp HHHHGGGG-TCSSSSCSSHHHHHHHHHHHHHH-HHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGG---CCBCCHHH
T ss_pred HHHhhcCC-CceEECCCChHHHHHHHHHHHHH-HHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccC---CCcChHHH
Confidence 43333322 34567777999999999999987 32222 3389999999999999998765433 38999999
Q ss_pred HHHHHHHHHHHHHcCC
Q 040505 213 ARRYCGNVIRKIMFSR 228 (228)
Q Consensus 213 ~~~~t~dii~~~~fG~ 228 (228)
+..+++|+|+.++||.
T Consensus 157 ~~~~~~dvi~~~~fG~ 172 (507)
T 3pm0_A 157 TVVAVANVMSAVCFGC 172 (507)
T ss_dssp HHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHccc
Confidence 9999999999999994
No 4
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.93 E-value=6.4e-25 Score=182.12 Aligned_cols=161 Identities=23% Similarity=0.282 Sum_probs=127.2
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
+..++||||+++|++||++++..... +..+.+|++|||+ ||++++|+.++|+++||+++++++.+++..|++++....
T Consensus 7 s~~kLPPGP~~lP~iGn~~~~~~~~~-~~~~~~~~~kYG~-i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~ 84 (479)
T 3tbg_A 7 SKGKLPPGPLPLPGLGNLLHVDFQNT-PYCFDQLRRRFGD-VFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPI 84 (479)
T ss_dssp --CCCCCCSCCBTTTBTGGGCCTTSH-HHHHHHHHHHHCS-EEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGG
T ss_pred CCCCCCCCCCCcCcccchHhhcCCCH-HHHHHHHHHHhCC-EEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHH
Confidence 34468999999999999999865443 7789999999998 999999999999999999999999888888888776555
Q ss_pred hhhccC--CccceeecCCChhHHHHHHHHHHhhhchhhhh--HhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHH
Q 040505 140 TEYLSG--GFLSIAVVPWGQQWKKMRKVVASHVLHSVRLD--SLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARR 215 (228)
Q Consensus 140 ~~~~~~--~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~ 215 (228)
...++. .+.+++++.+|+.|+++|+.+.+.| +...+. .+.+.+......+.+.+... .+..+|+.+++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~ 158 (479)
T 3tbg_A 85 TQILGFGPRSQGVFLARYGPAWREQRRFSVSTL-RNLGLGKKSLEQWVTEEAACLCAAFANH-----SGRPFRPNGLLDK 158 (479)
T ss_dssp GGGGTCBTTBCCSTTCCSSHHHHHHHHHHHHHH-HHTTSTTCHHHHHHHHHHHHHHHHHHTT-----TTCCBCTHHHHHH
T ss_pred HHHhccCCCCCceeeCCCCHHHHHHHHHHHHHh-cchhhhHHHHHHHHHHHHHHHHHHHHhc-----cCCcccHHHHHHH
Confidence 444432 2334567777999999999999998 444443 35666666666666665433 3347999999999
Q ss_pred HHHHHHHHHHcCC
Q 040505 216 YCGNVIRKIMFSR 228 (228)
Q Consensus 216 ~t~dii~~~~fG~ 228 (228)
+++|+++.++||.
T Consensus 159 ~~~~~~~~~~fg~ 171 (479)
T 3tbg_A 159 AVSNVIASLTCGR 171 (479)
T ss_dssp HHHHHHHHHHHSC
T ss_pred HHHHHHHHhhcCC
Confidence 9999999999984
No 5
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=99.92 E-value=3e-25 Score=185.32 Aligned_cols=162 Identities=12% Similarity=0.084 Sum_probs=128.2
Q ss_pred CCCCCCCCCCCcccccccccccCC--CCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCch
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRN--KPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLT 137 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~--~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~ 137 (228)
.+.+.||||+++|++||++++... ...+..+.+|+++||+ |+++++|+.+.++++||+.+++++.+ ..|.+++..
T Consensus 42 ~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~-v~~~~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~~ 118 (503)
T 3s79_A 42 EGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGE-FMRVWISGEETLIISKSSSMFHIMKH--NHYSSRFGS 118 (503)
T ss_dssp ---CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCS-EEEEESSSSEEEEECCHHHHHHHHHS--GGGCCCCCC
T ss_pred hccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCC-eEEEEeCCccEEEECCHHHHHHHHhc--CCCCCcchh
Confidence 345679999999999999987531 1234578899999998 99999999999999999999999954 345555433
Q ss_pred h-hhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHH
Q 040505 138 M-GTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRY 216 (228)
Q Consensus 138 ~-~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~ 216 (228)
. .....+..+.+++++.+|+.|+++||.++++| +...++.+.+.+.++++++++.|.+..+. +.++|+.+++..+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~f-~~~~l~~~~~~~~~~~~~~l~~l~~~~~~---~~~vdl~~~~~~~ 194 (503)
T 3s79_A 119 KLGLQCIGMHEKGIIFNNNPELWKTTRPFFMKAL-SGPGLVRMVTVCAESLKTHLDRLEEVTNE---SGYVDVLTLLRRV 194 (503)
T ss_dssp HHHHHHHTCTTSSSTTCCCHHHHHHHHHHHHHHT-STHHHHHHHHHHHHHHHHHHTTGGGTBCT---TSCBCHHHHHHHH
T ss_pred hhhhhhhccCCCceeeCCCccHHHHHHHhhhHhh-ChHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEcHHHHHHHH
Confidence 2 22333333345567777999999999999999 77889999999999999999888665432 3379999999999
Q ss_pred HHHHHHHHHcCC
Q 040505 217 CGNVIRKIMFSR 228 (228)
Q Consensus 217 t~dii~~~~fG~ 228 (228)
++|+++.++||.
T Consensus 195 ~~~vi~~~~fG~ 206 (503)
T 3s79_A 195 MLDTSNTLFLRI 206 (503)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHHcCc
Confidence 999999999994
No 6
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=99.92 E-value=2e-24 Score=179.11 Aligned_cols=159 Identities=18% Similarity=0.266 Sum_probs=126.2
Q ss_pred CCCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh
Q 040505 59 NKRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTM 138 (228)
Q Consensus 59 ~~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~ 138 (228)
+++.+.||||+++|++||++++... ..+..+.+|+++||+ |+++++++.+.++++||+.+++++.+++..|.+++...
T Consensus 6 ~~~~~lpPgP~~~PliG~~~~~~~~-~~~~~~~~~~~~yG~-v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~ 83 (476)
T 3e6i_A 6 SSKGKLPPGPFPLPIIGNLFQLELK-NIPKSFTRLAQRFGP-VFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLP 83 (476)
T ss_dssp ----CCCCCCCCBTTTBTGGGCCTT-CHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCG
T ss_pred cCCCCCCcCCCCcccccChhhhccc-cHhHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCc
Confidence 3566789999999999999988433 347889999999998 99999999999999999999999988777777666444
Q ss_pred hhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhh--hHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHH
Q 040505 139 GTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRL--DSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRY 216 (228)
Q Consensus 139 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~ 216 (228)
....+..+ + ++..+|+.|+++||...+.| ....+ +.+++.+.++++++++.|.+. .+.++|+.+++..+
T Consensus 84 ~~~~~~~~--~-l~~~~g~~w~~~Rr~~~~~l-~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~~d~~~~~~~~ 154 (476)
T 3e6i_A 84 AFHAHRDR--G-IIFNNGPTWKDIRRFSLTTL-RNYGMGKQGNESRIQREAHFLLEALRKT-----QGQPFDPTFLIGCA 154 (476)
T ss_dssp GGGGGTTS--S-STTCCSTTHHHHHHHHHHHH-HHTC-CCSHHHHHHHHHHHHHHHHHHTT-----TTSCBCTHHHHTHH
T ss_pred hhheecCC--C-EEecCCcHHHHHHHHHHHHH-HhcCCCchHHHHHHHHHHHHHHHHHHHh-----CCCCcChHHHHHHH
Confidence 33333322 3 55566999999999998888 43323 457899999999999999653 23489999999999
Q ss_pred HHHHHHHHHcCC
Q 040505 217 CGNVIRKIMFSR 228 (228)
Q Consensus 217 t~dii~~~~fG~ 228 (228)
++|+|++++||.
T Consensus 155 ~~dvi~~~~fG~ 166 (476)
T 3e6i_A 155 PCNVIADILFRK 166 (476)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHHcCC
Confidence 999999999994
No 7
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.92 E-value=1.4e-24 Score=180.24 Aligned_cols=164 Identities=16% Similarity=0.317 Sum_probs=132.4
Q ss_pred CCCCCCCCCCCcccccccccccCC---CCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCc
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRN---KPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPL 136 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~---~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~ 136 (228)
++.+.+|||+++|++||++++... +..+..+.+|+++||+ |+++++|+.+.|+++||+++++++.++ ..|.+++.
T Consensus 21 ~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~-i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~~ 98 (482)
T 3k9v_A 21 RNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQ-IFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQRLE 98 (482)
T ss_dssp EEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCCCC
T ss_pred CCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCC-EEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCCCC
Confidence 667778999999999999887532 2357889999999998 999999999999999999999999774 56666653
Q ss_pred hh---hhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH
Q 040505 137 TM---GTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA 213 (228)
Q Consensus 137 ~~---~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~ 213 (228)
.. ........+.+ ++..+|+.|+++||.+.++|++.+.++.+.+.+.++++++++.|.+..+. +|.++|+.+++
T Consensus 99 ~~~~~~~~~~~~~~~~-l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~--~g~~vd~~~~~ 175 (482)
T 3k9v_A 99 IKPWKAYRDHRNEAYG-LMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDE--RGRIPDLYSEL 175 (482)
T ss_dssp CHHHHHHHHHHTCCCC-TTTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCT--TSCCTTHHHHH
T ss_pred chHHHHHHHhcCCCCC-ceeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCCCHHHHH
Confidence 21 11111111223 55567999999999999998677788999999999999999999876432 34489999999
Q ss_pred HHHHHHHHHHHHcCC
Q 040505 214 RRYCGNVIRKIMFSR 228 (228)
Q Consensus 214 ~~~t~dii~~~~fG~ 228 (228)
..+++|+|++++||+
T Consensus 176 ~~~t~dvi~~~~fG~ 190 (482)
T 3k9v_A 176 NKWSFESICLVLYEK 190 (482)
T ss_dssp HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHccc
Confidence 999999999999984
No 8
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=99.91 E-value=2.5e-23 Score=172.71 Aligned_cols=159 Identities=22% Similarity=0.383 Sum_probs=125.8
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
+..+.||||+++|++||++++.. +..+..+.+++++||+ |+++++++.+.++++||+.+++++.+++..|.+++....
T Consensus 7 ~~~~~pPgP~~~p~iG~~~~~~~-~~~~~~~~~l~~~yG~-v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~ 84 (476)
T 1po5_A 7 SKGKLPPGPSPLPVLGNLLQMDR-KGLLRSFLRLREKYGD-VFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAV 84 (476)
T ss_dssp --CCCCCCSCCBTTTBTGGGCCT-TCHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGG
T ss_pred CCCCCCcCCCCCCccccHHhccC-CcHHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 44467899999999999998732 3347889999999998 999999998999999999999999776666765543322
Q ss_pred hhhccCCccceeecCCChhHHHHHHHHHHhhhchh--hhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHH
Q 040505 140 TEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSV--RLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYC 217 (228)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~--~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t 217 (228)
...+..+ .+ ++..+|+.|+++||++.+.| +.. ..+.+.+.+.++++++++.|.+. .+.++|+.+++..++
T Consensus 85 ~~~~~~~-~~-l~~~~g~~w~~~Rr~~~~~f-~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~~d~~~~~~~~~ 156 (476)
T 1po5_A 85 VDPIFQG-YG-VIFANGERWRALRRFSLATM-RDFGMGKRSVEERIQEEARCLVEELRKS-----KGALLDNTLLFHSIT 156 (476)
T ss_dssp GCSCCSS-CC-CCCSSHHHHHHHHHHHHHHH-HHSCCCHHHHHHHHHHHHHHHHHHHHHT-----TTCCBCCHHHHHHHH
T ss_pred HHhhcCC-Cc-eEecCCcHHHHHHHHHHHHH-HHhCCChhHHHHHHHHHHHHHHHHHHhc-----CCCccCHHHHHHHHH
Confidence 2222222 24 44457999999999999999 554 35779999999999999999753 123799999999999
Q ss_pred HHHHHHHHcCC
Q 040505 218 GNVIRKIMFSR 228 (228)
Q Consensus 218 ~dii~~~~fG~ 228 (228)
+|+|++++||.
T Consensus 157 ~~vi~~~~fG~ 167 (476)
T 1po5_A 157 SNIICSIVFGK 167 (476)
T ss_dssp HHHHHHHHHSS
T ss_pred HHHHHHHHcCC
Confidence 99999999994
No 9
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=99.91 E-value=1.3e-24 Score=181.14 Aligned_cols=155 Identities=17% Similarity=0.163 Sum_probs=121.7
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
++.+.||||++ ++++... ..+..+.+|+++||+ |+++++|+.+.++++||+.+++++.+++..|.+++....
T Consensus 26 ~~~~lPPGP~~------l~~~~~~-~~~~~~~~l~~~yG~-v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~ 97 (496)
T 3qz1_A 26 RNLHLPPLVPG------FLHLLQP-NLPIHLLSLTQKLGP-VYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPS 97 (496)
T ss_dssp ---CCCCBCSC------SCTTSSS-CHHHHHHHGGGTSCS-EEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTT
T ss_pred cCCCCCcCCcc------ccccCCC-cchHHHHHHHHHhCC-EEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcch
Confidence 56788999986 4444333 347889999999998 999999999999999999999999887777877765543
Q ss_pred hhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHH
Q 040505 140 TEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGN 219 (228)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~d 219 (228)
......+..+++++++|+.|+++||+++++| +.+.++.+.+.++++++++++.|.+. .|.++|+.+++..+++|
T Consensus 98 ~~~~~~~~~~l~~~~~g~~w~~~Rr~~~~~f-~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~vd~~~~~~~~~~d 171 (496)
T 3qz1_A 98 YKLVSQRCQDISLGDYSLLWKAHKKLTRSAL-LLGTRSSMEPWVDQLTQEFCERMRVQ-----AGAPVTIQKEFSLLTCS 171 (496)
T ss_dssp TTTSCTTCCCSSSSCCSHHHHHHHHHHHHHH-HC--CCCHHHHHHHHHHHHHHHHHTT-----CSCCCHHHHHHTHHHHH
T ss_pred HHHhcCCCCceEECCCCHHHHHHHHHHHHHH-hhccHhhHHHHHHHHHHHHHHHHHhc-----CCCccCHHHHHHHHHHH
Confidence 3333333224445444999999999999999 56667889999999999999999762 33489999999999999
Q ss_pred HHHHHHcCC
Q 040505 220 VIRKIMFSR 228 (228)
Q Consensus 220 ii~~~~fG~ 228 (228)
+|+.++||.
T Consensus 172 vi~~~~fG~ 180 (496)
T 3qz1_A 172 IICYLTFGN 180 (496)
T ss_dssp HTTTTSTTC
T ss_pred HHHHHhcCC
Confidence 999999995
No 10
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=99.91 E-value=2.2e-23 Score=173.92 Aligned_cols=162 Identities=18% Similarity=0.258 Sum_probs=126.8
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
++.+.+|||+++|++|+++.+.+ ..+..+.+++++||+ |+++++++.+.++++||+.+++++.+++..|.+++....
T Consensus 13 ~~lp~~PgP~~~p~~G~~~~~~~--~~~~~~~~l~~~yG~-v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~ 89 (495)
T 2hi4_A 13 KGLKSPPEPWGWPLLGHVLTLGK--NPHLALSRMSQRYGD-VLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYT 89 (495)
T ss_dssp TTCBCCCCCCCBTTTBTHHHHTT--CHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHH
T ss_pred CCCCCCCCCCCCcceeeHHhcCc--cHHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHH
Confidence 34444599999999999988743 347889999999998 999999999999999999999999876666766654333
Q ss_pred hhhccCCccceeec-CCChhHHHHHHHHHHhhh--chhhh---h---HhHHHHHHHHHHHHHHHHHhchhCCCCccccHH
Q 040505 140 TEYLSGGFLSIAVV-PWGQQWKKMRKVVASHVL--HSVRL---D---SLLVKRREEAEELVSFVYNQCIRNNVDSVINVR 210 (228)
Q Consensus 140 ~~~~~~~~~~~~~~-~~g~~w~~~R~~~~~~f~--~~~~l---~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~ 210 (228)
...+..+ .+++++ .+|+.|+++||+++++|. +..+. + .+++.+.++++++++.|.+..+. +.++|+.
T Consensus 90 ~~~~~~~-~~l~~~~~~g~~w~~~Rr~~~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~---~~~~d~~ 165 (495)
T 2hi4_A 90 STLITDG-QSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAG---PGHFDPY 165 (495)
T ss_dssp HHTSTTS-CCTTTSSCCSHHHHHHHHHHHHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHT---TSCBCHH
T ss_pred HHHhcCC-CCEEEcCCCChHHHHHHHHHHHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccC---CCccchH
Confidence 3333222 344555 369999999999999872 22222 2 79999999999999999875433 2379999
Q ss_pred HHHHHHHHHHHHHHHcCC
Q 040505 211 LVARRYCGNVIRKIMFSR 228 (228)
Q Consensus 211 ~~~~~~t~dii~~~~fG~ 228 (228)
+++..+++|+|+.++||.
T Consensus 166 ~~~~~~~~dvi~~~~fG~ 183 (495)
T 2hi4_A 166 NQVVVSVANVIGAMCFGQ 183 (495)
T ss_dssp HHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 999999999999999984
No 11
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=99.90 E-value=2.2e-23 Score=173.05 Aligned_cols=159 Identities=20% Similarity=0.346 Sum_probs=126.3
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
+..+.||||+++|++||++++.. +..+..+.+++++||+ |+++++++.+.++++||+.+++++.++...|.+++....
T Consensus 7 ~~~~~pPgP~~~p~iG~~~~~~~-~~~~~~~~~l~~~yG~-v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~ 84 (476)
T 2fdv_A 7 SKGKLPPGPTPLPFIGNYLQLNT-EQMYNSLMKISERYGP-VFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQAT 84 (476)
T ss_dssp -CCBCCCCCCCBTTTBTGGGCCT-TBHHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHH
T ss_pred ccCCCCCCCCCCcccccHhhcCC-cchHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHH
Confidence 34467899999999999998743 3347889999999998 999999999999999999999999766666765543322
Q ss_pred hhhccCCccceeecCCChhHHHHHHHHHHhhhchhhh--hHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHH
Q 040505 140 TEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRL--DSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYC 217 (228)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t 217 (228)
...+..+ .+ ++..+|+.|+++|+++.++| +...+ +.+.+.+.++++++++.|.+. .+.++|+.+++..++
T Consensus 85 ~~~~~~~-~~-l~~~~g~~~~~~Rr~~~~~f-~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~vd~~~~~~~~~ 156 (476)
T 2fdv_A 85 FDWVFKG-YG-VVFSNGERAKQLRRFSIATL-RDFGVGKRGIEERIQEEAGFLIDALRGT-----GGANIDPTFFLSRTV 156 (476)
T ss_dssp HHHHHTT-CS-SSSCCHHHHHHHHHHHHHHH-HHTTTTSHHHHHHHHHHHHHHHHHHHHT-----TTCCBCCHHHHHHHH
T ss_pred HhhhcCC-CC-eEecCchHHHHHHHHHHHHH-HHhCCChhhHHHHHHHHHHHHHHHHHhc-----CCCccChHHHHHHHH
Confidence 2222222 23 44456999999999999999 65555 789999999999999999653 223799999999999
Q ss_pred HHHHHHHHcCC
Q 040505 218 GNVIRKIMFSR 228 (228)
Q Consensus 218 ~dii~~~~fG~ 228 (228)
+|+|++++||.
T Consensus 157 ~~vi~~~~fG~ 167 (476)
T 2fdv_A 157 SNVISSIVFGD 167 (476)
T ss_dssp HHHHHHHHHSS
T ss_pred HHHHHHHHcCC
Confidence 99999999994
No 12
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=99.90 E-value=1.9e-23 Score=173.71 Aligned_cols=161 Identities=16% Similarity=0.273 Sum_probs=127.4
Q ss_pred CCCCCCCCCCCcccccccccccCCCC-chHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKP-TFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTM 138 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~-~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~ 138 (228)
++.+.||||+++|++|+++.+..... .+..+.+++++||+ |+++++++.+.++++||+.+++++.+++..|.+++...
T Consensus 9 ~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~-v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~ 87 (481)
T 3czh_A 9 RPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGE-IFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLP 87 (481)
T ss_dssp ---CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCS-EEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCH
T ss_pred CCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCC-EEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcH
Confidence 45678999999999999988754431 47789999999998 99999999999999999999999987766677665433
Q ss_pred hhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhh--hHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHH
Q 040505 139 GTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRL--DSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRY 216 (228)
Q Consensus 139 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~ 216 (228)
....+..+ .+++++.+|+.|+++|++++++| +...+ +.+++.+.++++++++.|.+. .+.++|+.+++..+
T Consensus 88 ~~~~~~~~-~~~~~~~~g~~w~~~R~~~~~~f-~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~~d~~~~~~~~ 160 (481)
T 3czh_A 88 LFMKMTKM-GGLLNSRYGRGWVDHRRLAVNSF-RYFGYGQKSFESKILEETKFFNDAIETY-----KGRPFDFKQLITNA 160 (481)
T ss_dssp HHHHHHTT-CSSTTCCSSHHHHHHHHHHHHHH-HHTTTTSTTHHHHHHHHHHHHHHHHHTT-----TTCCBCCHHHHHHH
T ss_pred HHHhhcCC-CCeEeCCCChHHHHHHHHHHHHH-HHhcCChHHHHHHHHHHHHHHHHHHHHc-----CCCCcCHHHHHHHH
Confidence 33333222 23455667999999999999999 54433 678999999999999999653 23379999999999
Q ss_pred HHHHHHHHHcCC
Q 040505 217 CGNVIRKIMFSR 228 (228)
Q Consensus 217 t~dii~~~~fG~ 228 (228)
++|+|+.++||.
T Consensus 161 ~~~vi~~~~fG~ 172 (481)
T 3czh_A 161 VSNITNLIIFGE 172 (481)
T ss_dssp HHHHHHHHHHSS
T ss_pred HHHHHHHHHcCC
Confidence 999999999994
No 13
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=99.90 E-value=1.9e-23 Score=173.42 Aligned_cols=159 Identities=23% Similarity=0.322 Sum_probs=119.7
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
+..+.||||+++|++|+++++.. +..+..+.+++++||+ |+++++++.+.++++||+.+++++.+++..|.+++....
T Consensus 8 ~~~~~pPgP~~~p~iG~~~~~~~-~~~~~~~~~l~~~yG~-v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~ 85 (477)
T 1r9o_A 8 GRGKLPPGPTPLPVIGNILQIGI-KDISKSLTNLSKVYGP-VFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPL 85 (477)
T ss_dssp -CCBCCCCSSSCC-----CCBCH-HHHHHHHHHHHHHHCS-EEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSC
T ss_pred CCCCCCCCCCCCceeccHhhcCC-CChHHHHHHHHHHhCC-EEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchh
Confidence 44467899999999999988732 2246788999999998 999999888999999999999999766666765443222
Q ss_pred hhhccCCccceeecCCChhHHHHHHHHHHhhhchh--hhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHH
Q 040505 140 TEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSV--RLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYC 217 (228)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~--~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t 217 (228)
......+ .+ ++..+|+.|+++||.+.++| +.. ..+.+.+.+.++++++++.|.+. .+.++|+.+++..++
T Consensus 86 ~~~~~~~-~~-l~~~~g~~w~~~Rr~~~~~~-~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~vd~~~~~~~~~ 157 (477)
T 1r9o_A 86 AERANRG-FG-IVFSNGKKWKEIRRFSLMTL-RNFGMGKRSIEDRVQEEARCLVEELRKT-----KASPCDPTFILGCAP 157 (477)
T ss_dssp CCTTTCT-TS-STTCCHHHHHHHHHHHHHHH-TTSSSCSSCHHHHHHHHHHHHHHHHHTT-----TTSCBCTHHHHHHHH
T ss_pred hhhccCC-Cc-eEecCChHHHHHHHHHHHHH-HHhCCChHHHHHHHHHHHHHHHHHHHhc-----CCCccChHHHHHHHH
Confidence 2222112 23 44457999999999999999 554 34778999999999999999653 123799999999999
Q ss_pred HHHHHHHHcCC
Q 040505 218 GNVIRKIMFSR 228 (228)
Q Consensus 218 ~dii~~~~fG~ 228 (228)
+|+|++++||.
T Consensus 158 ~~vi~~~~fG~ 168 (477)
T 1r9o_A 158 CNVICSIIFHK 168 (477)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHccC
Confidence 99999999994
No 14
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.89 E-value=7.2e-23 Score=170.26 Aligned_cols=166 Identities=16% Similarity=0.172 Sum_probs=129.3
Q ss_pred CCCCCCCCCCCCcccccccccccC---CCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCC
Q 040505 59 NKRKPLPPGPAPWPIVGSLPEMWR---NKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRP 135 (228)
Q Consensus 59 ~~~~~~pPgP~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~ 135 (228)
.+|.+.+|||+..++. +++.+.. .+..+..+.+|++|||+ |+++++|+.+.|+++||+++++++.++ ..|.+++
T Consensus 5 ~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~-i~~~~~g~~~~vvv~dp~~~~~il~~~-~~f~~r~ 81 (487)
T 3n9y_A 5 PRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGP-IYREKLGNVESVYVIDPEDVALLFKSE-GPNPERF 81 (487)
T ss_dssp CBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHHHTC-CSSCCCC
T ss_pred CCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCc-eeeccCCCCCEEEEcCHHHHHHHHHhC-CCCCCCC
Confidence 3677789999987765 6666532 22357789999999998 999999999999999999999999765 4566665
Q ss_pred chhh---hhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchh-CCCCccccHHH
Q 040505 136 LTMG---TEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIR-NNVDSVINVRL 211 (228)
Q Consensus 136 ~~~~---~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~d~~~ 211 (228)
.... .......+.+ +++.+|+.|+++||++++++++.++++.+.+.++++++++++.|.+..+. ++++.++|+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~-l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~ 160 (487)
T 3n9y_A 82 LIPPWVAYHQYYQRPIG-VLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISD 160 (487)
T ss_dssp CCHHHHHHHHHTTCCCC-GGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHH
T ss_pred CCcHHHHHHHHccccCC-CccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHH
Confidence 3321 1111112223 56677999999999999974499999999999999999999999875432 22345799999
Q ss_pred HHHHHHHHHHHHHHcCC
Q 040505 212 VARRYCGNVIRKIMFSR 228 (228)
Q Consensus 212 ~~~~~t~dii~~~~fG~ 228 (228)
++..+++|+|+.++||.
T Consensus 161 ~~~~~t~dvi~~~~fG~ 177 (487)
T 3n9y_A 161 DLFRFAFESITNVIFGE 177 (487)
T ss_dssp HHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999999994
No 15
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.88 E-value=1.8e-22 Score=166.24 Aligned_cols=153 Identities=16% Similarity=0.139 Sum_probs=124.8
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
++.+.||||+++|++||++.+..+. + ++.+++++||+ |++++.++.+.++++||+.+++++.+++..|+.......
T Consensus 9 ~~~~~pPgp~~~P~iG~~~~~~~~~--~-~~~~~~~~yg~-v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~ 84 (444)
T 2ve3_A 9 NSLPIPPGDFGLPWLGETLNFLNDG--D-FGKKRQQQFGP-IFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPLST 84 (444)
T ss_dssp CCCCCCCCCCCBTTTBTHHHHHHCT--T-HHHHHHHHHCS-SEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCHHH
T ss_pred CCCCCCCCCCCCCccccHHHHhcCc--H-HHHHHHHHcCC-eEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhHHH
Confidence 5567899999999999998876543 4 77899999998 999998888899999999999999766444543222222
Q ss_pred hhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHH
Q 040505 140 TEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGN 219 (228)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~d 219 (228)
...++.. + ++..+|+.|+++|+++.++| +.++++.+.+.++++++++++.|.+ ++ ++|+.+++..+++|
T Consensus 85 ~~~~g~~--~-l~~~~g~~~~~~R~~~~~~f-~~~~l~~~~~~i~~~~~~l~~~l~~----~~---~vd~~~~~~~~~~~ 153 (444)
T 2ve3_A 85 RILLGPN--A-LATQMGEIHRSRRKILYQAF-LPRTLDSYLPKMDGIVQGYLEQWGK----AN---EVIWYPQLRRMTFD 153 (444)
T ss_dssp HHHHCTT--S-GGGCCHHHHHHHHHHHHGGG-CHHHHHTTHHHHHHHHHHHHHHHHH----SS---EEEHHHHHHHHHHH
T ss_pred HHHhCcc--c-cccCCchHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHHHHHHhcC----CC---cEeHHHHHHHHHHH
Confidence 2333432 2 44567999999999999999 8888999999999999999999842 22 79999999999999
Q ss_pred HHHHHHcC
Q 040505 220 VIRKIMFS 227 (228)
Q Consensus 220 ii~~~~fG 227 (228)
+|++++||
T Consensus 154 vi~~~~fG 161 (444)
T 2ve3_A 154 VAATLFMG 161 (444)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHcC
Confidence 99999998
No 16
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.88 E-value=8.6e-23 Score=168.85 Aligned_cols=154 Identities=9% Similarity=0.077 Sum_probs=127.3
Q ss_pred CCCCCCCCCC-cccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh-
Q 040505 61 RKPLPPGPAP-WPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTM- 138 (228)
Q Consensus 61 ~~~~pPgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~- 138 (228)
+.+.||+|++ +|++||++++.++ .+.++.++++|||| ||++++++.+.|+++||+.+++++.+++..+..++...
T Consensus 9 g~~~PP~~~~~lP~iG~~~~~~~~--~~~~~~~~~~kYG~-i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~ 85 (461)
T 3ld6_A 9 GVKSPPYIFSPIPFLGHAIAFGKS--PIEFLENAYEKYGP-VFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSR 85 (461)
T ss_dssp -CCCCCBCCCSSTTTBTHHHHHHC--HHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHH
T ss_pred CCCCCCCCCCCcCeeeeHHHhhhC--HHHHHHHHHHHhCC-EEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhh
Confidence 3456788875 9999999998654 38899999999998 99999999999999999999999988777776655332
Q ss_pred -hhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHH
Q 040505 139 -GTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYC 217 (228)
Q Consensus 139 -~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t 217 (228)
....+|.+ ++++.+|+.|+++|+++.++| +...++.+.+.++++++++++.|.+ +..+|+.+.+..++
T Consensus 86 ~~~~~~g~~---~~~~~~~~~~~~~R~~~~~~f-~~~~l~~~~~~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 154 (461)
T 3ld6_A 86 LTTPVFGKG---VAYDVPNPVFLEQKKMLKSGL-NIAHFKQHVSIIEKETKEYFESWGE-------SGEKNVFEALSELI 154 (461)
T ss_dssp HHHHHHCTT---SGGGSCHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHGGGGCS-------EEEEEHHHHHHHHH
T ss_pred hhhccCCCc---cccCCCcHHHHHHHHhccccc-cHHHHhhhhHHHHHHHHHHHHHHhh-------cCCccHHHHHHHHH
Confidence 22334443 467777999999999999999 8888999999999999999887732 22689999999999
Q ss_pred HHHHHHHHcCC
Q 040505 218 GNVIRKIMFSR 228 (228)
Q Consensus 218 ~dii~~~~fG~ 228 (228)
+|+++.++||.
T Consensus 155 ~~~i~~~~fG~ 165 (461)
T 3ld6_A 155 ILTASHCLHGK 165 (461)
T ss_dssp HHHHHHHHTCH
T ss_pred HHHHHHHHcCc
Confidence 99999999983
No 17
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.88 E-value=4.5e-22 Score=165.00 Aligned_cols=153 Identities=16% Similarity=0.128 Sum_probs=121.3
Q ss_pred CCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh---hh
Q 040505 64 LPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTM---GT 140 (228)
Q Consensus 64 ~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~---~~ 140 (228)
.+|||+++|++||++++.... .+..+.+++++||+ |++++.++.+.++++||+.+++++.+ ..|.+..... ..
T Consensus 4 ~~PGP~~~p~iG~l~~~~~~~-~~~~~~~~~~~yG~-v~~~~~~~~~~v~v~~~~~~~~il~~--~~f~~~~~~~~~~~~ 79 (470)
T 2ij2_A 4 EMPQPKTFGELKNLPLLNTDK-PVQALMKIADELGE-IFKFEAPGRVTRYLSSQRLIKEACDE--SRFDKNLSQALKFVR 79 (470)
T ss_dssp CCCCCCCCGGGTTGGGGCSSC-HHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHTCT--TTEEECCCHHHHHHH
T ss_pred CCCCCCCCCccccHHHHhccc-chHHHHHHHHHhCC-eEEEecCCccEEEECCHHHHHHHHhh--cCcCcCchhHHHHHH
Confidence 479999999999999885433 36778999999998 99999999999999999999999953 2343222111 11
Q ss_pred hhccCCccceeec-CCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHH
Q 040505 141 EYLSGGFLSIAVV-PWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGN 219 (228)
Q Consensus 141 ~~~~~~~~~~~~~-~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~d 219 (228)
...+. +++++ .+|+.|+++||+++++| +..+++.+.+.+.++++++++.|.+.. .+.++|+.+++..+++|
T Consensus 80 ~~~~~---~l~~~~~~g~~w~~~Rr~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~~----~~~~vd~~~~~~~~~~~ 151 (470)
T 2ij2_A 80 DFAGD---GLFTSWTHEKNWKKAHNILLPSF-SQQAMKGYHAMMVDIAVQLVQKWERLN----ADEHIEVPEDMTRLTLD 151 (470)
T ss_dssp HHHTT---SGGGSCTTSHHHHHHHHHHGGGG-STTTHHHHHHHHHHHHHHHHHHHHTCC----TTCCEEHHHHHHHHHHH
T ss_pred HhcCC---ceEEcCCCchHHHHHHHHhcccc-CHHHHHHHHHHHHHHHHHHHHHHHhhC----CCCeEEHHHHHHHHHHH
Confidence 11222 23443 47999999999999999 888899999999999999999986532 23479999999999999
Q ss_pred HHHHHHcCC
Q 040505 220 VIRKIMFSR 228 (228)
Q Consensus 220 ii~~~~fG~ 228 (228)
+|+.++||.
T Consensus 152 vi~~~~fG~ 160 (470)
T 2ij2_A 152 TIGLCGFNY 160 (470)
T ss_dssp HHHHHHHSC
T ss_pred HHHHHHcCC
Confidence 999999984
No 18
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.87 E-value=1.5e-22 Score=166.58 Aligned_cols=154 Identities=16% Similarity=0.204 Sum_probs=126.9
Q ss_pred CCCCCCCCC-cccccccccccCCCCchHHHHHHHHHhC-CceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 62 KPLPPGPAP-WPIVGSLPEMWRNKPTFKWIHGLMRELN-TNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 62 ~~~pPgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~kyG-~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
.+.||||++ +|++||++++.++ .+.++.+++++|| + |+++++++.+.++++||+.+++++.+++..+++++....
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~~~~--~~~~~~~~~~~yG~~-i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~ 78 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQFGKS--PLGFMQECKRQLKSG-IFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSF 78 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHHHHC--HHHHHHHHHHHHTCS-EEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGG
T ss_pred CCCCCCCCCCcchhccHHHHccC--HHHHHHHHHHHhCCC-eEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHH
Confidence 356899665 9999999988643 3788999999999 8 999999999999999999999999877777776654333
Q ss_pred -hhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHH-HHHHhchhCCCCccccHHHHHHHHH
Q 040505 140 -TEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVS-FVYNQCIRNNVDSVINVRLVARRYC 217 (228)
Q Consensus 140 -~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~-~l~~~~~~~~~~~~~d~~~~~~~~t 217 (228)
...+|.+ +++..+|+.|+++|+.+.++| +.++++.+.+.+.++++++++ .|.+ .+.++|+.+++..++
T Consensus 79 ~~~~~g~~---~~~~~~~~~~~~~R~~~~~~f-~~~~l~~~~~~i~~~~~~ll~~~~~~------~~~~vd~~~~~~~~~ 148 (450)
T 3gw9_A 79 MVPVFGEG---VAYAAPYPRMREQLNFLAEEL-TIAKFQNFVPAIQHEVRKFMAANWDK------DEGEINLLEDCSTMI 148 (450)
T ss_dssp GHHHHCTT---SGGGSCHHHHHHHHHHHHHTT-SGGGCTTHHHHHHHHHHHHHHHHSCS------SEEEEEHHHHHHHHH
T ss_pred HHHHhcCC---cccCCCcHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHhcc------CCCcccHHHHHHHHH
Confidence 2334443 455567999999999999999 888899999999999999998 5532 123799999999999
Q ss_pred HHHHHHHHcCC
Q 040505 218 GNVIRKIMFSR 228 (228)
Q Consensus 218 ~dii~~~~fG~ 228 (228)
+|+++.++||.
T Consensus 149 ~~~i~~~~fG~ 159 (450)
T 3gw9_A 149 INTACQCLFGE 159 (450)
T ss_dssp HHHHHHHHSCH
T ss_pred HHHHHHHHcCc
Confidence 99999999983
No 19
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.86 E-value=8.3e-22 Score=162.87 Aligned_cols=154 Identities=10% Similarity=0.100 Sum_probs=125.2
Q ss_pred CCCCCCCC-CCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCch-
Q 040505 60 KRKPLPPG-PAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLT- 137 (228)
Q Consensus 60 ~~~~~pPg-P~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~- 137 (228)
++.+.||| |+++|++||++++.++ .+.++.+++++||+ |+++++++.+.+++++|+.+++++.+++..+......
T Consensus 8 ~~~~~PPg~P~~lP~iG~l~~~~~~--~~~~~~~~~~~yG~-v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~ 84 (461)
T 3i3k_A 8 AGVKSPPYIFSPIPFLGHAIAFGKS--PIEFLENAYEKYGP-VFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYS 84 (461)
T ss_dssp --CCCCCBCCCSSTTTBTHHHHHHC--HHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHH
T ss_pred CCCCCCCCCCCCCCccccHHhhccC--HHHHHHHHHHHhCC-EEEEEecCceEEEEeChHHHHHHHhccccccccchHHH
Confidence 56678999 8899999999988643 37889999999998 9999999999999999999999998765555443221
Q ss_pred -hhhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHH
Q 040505 138 -MGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRY 216 (228)
Q Consensus 138 -~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~ 216 (228)
.....+|.+ +.++.+|+.|+++||++.+.| +...++.+.+.+.++++++++.|.+ +..+|+.+++..+
T Consensus 85 ~~~~~~~g~g---~~~~~~g~~w~~~Rr~~~~~f-~~~~l~~~~~~~~~~~~~ll~~l~~-------~~~~dl~~~~~~~ 153 (461)
T 3i3k_A 85 RLTTPVFGKG---VAYDVPNPVFLEQKKMLKSGL-NIAHFKQHVSIIEKETKEYFESWGE-------SGEKNVFEALSEL 153 (461)
T ss_dssp HHHHHHHCTT---SGGGSCHHHHHHHHHHHHHHS-SHHHHHHHHHHHHHHHHHHGGGGCS-------EEEEEHHHHHHHH
T ss_pred HhhhhhcCCe---eeeCCCcHHHHHHHHHHhhhh-CHHHHHHHHHHHHHHHHHHHHHhhh-------cCCcCHHHHHHHH
Confidence 112233433 456667999999999999998 8888999999999999999988732 1268999999999
Q ss_pred HHHHHHHHHcC
Q 040505 217 CGNVIRKIMFS 227 (228)
Q Consensus 217 t~dii~~~~fG 227 (228)
++++++.++||
T Consensus 154 ~~~~~~~~~~G 164 (461)
T 3i3k_A 154 IILTASHCLHG 164 (461)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHcc
Confidence 99999999998
No 20
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.85 E-value=5e-21 Score=158.07 Aligned_cols=150 Identities=9% Similarity=0.075 Sum_probs=105.5
Q ss_pred CCCCC-CCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhh-
Q 040505 63 PLPPG-PAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGT- 140 (228)
Q Consensus 63 ~~pPg-P~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~- 140 (228)
+.||| |.++|++||+.++..+ .+..+.+++++||+ |+++++++.+.++++||+.+++++.+++..|.+++.....
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~~~--~~~~~~~l~~~yG~-v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~ 80 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFRTD--PIGLMQRVRDELGD-VGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMT 80 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHTTC--HHHHHHHHHHHHCS-EEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGH
T ss_pred CCCCCCCCCCCCccCHHHHhhC--hHHHHHHHHHHcCC-EEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHH
Confidence 45788 7789999999987433 37889999999998 9999999989999999999999997765556555432222
Q ss_pred hhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHH
Q 040505 141 EYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNV 220 (228)
Q Consensus 141 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~di 220 (228)
..++.+ ++. +|+.|+++|++++++| +.++++.+.+.+.++++++++.|.+ +.++|+.+++..+++|+
T Consensus 81 ~~~g~~----~~~-~~~~~~~~R~~~~~~f-~~~~l~~~~~~i~~~~~~l~~~~~~-------~~~vd~~~~~~~~~~~v 147 (455)
T 2cib_A 81 PIFGEG----VVF-DASPERRKEMLHNAAL-RGEQMKGHAATIEDQVRRMIADWGE-------AGEIDLLDFFAELTIYT 147 (455)
T ss_dssp HHHC-------------------------C-CHHHHHHHHHHHHHHHHHHHTTCCS-------EEEEEHHHHHHHHHHHH
T ss_pred hhcCCc----ccc-CcHHHHHHHhhhcccc-CHHHHHHHHHHHHHHHHHHHHHhCC-------CCcEeHHHHHHHHHHHH
Confidence 223322 333 5899999999999999 8888999999999999999987632 12799999999999999
Q ss_pred HHHHHcCC
Q 040505 221 IRKIMFSR 228 (228)
Q Consensus 221 i~~~~fG~ 228 (228)
|+.++||.
T Consensus 148 i~~~~fG~ 155 (455)
T 2cib_A 148 SSACLIGK 155 (455)
T ss_dssp HHHHHTCH
T ss_pred HHHHHcCC
Confidence 99999983
No 21
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.84 E-value=1.5e-21 Score=162.61 Aligned_cols=163 Identities=11% Similarity=0.052 Sum_probs=127.4
Q ss_pred CCCCCCCCCCCC-cccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCC-CCCCCCc
Q 040505 59 NKRKPLPPGPAP-WPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDS-VFASRPL 136 (228)
Q Consensus 59 ~~~~~~pPgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~-~~~~~~~ 136 (228)
++..+.||||++ +|++||++.+.. ..+.++.+++++||+ |+++++++.+++++++|+.+++++.++.. .+..+..
T Consensus 9 ~~~~~~PPgp~~~lPliG~~~~~~~--~p~~~~~~l~~~yGp-v~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~ 85 (491)
T 3v8d_A 9 RRQTGEPPLENGLIPYLGCALQFGA--NPLEFLRANQRKHGH-VFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHF 85 (491)
T ss_dssp CCCTTSCCEEEEEESSTTTTGGGTC--CHHHHHHHHHHHHCS-EEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHH
T ss_pred ccCCCCCCCCCCCcceeccHHHHhc--CHHHHHHHHHHHcCC-ceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHH
Confidence 356678999999 699999999854 348899999999998 99999999999999999999999965431 2332222
Q ss_pred hhhhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHH
Q 040505 137 TMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRY 216 (228)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~ 216 (228)
......++.+. +...+|+.|+++|+.+.+.| +.+.++.+.+.+.++++++++.+.............|+.+++..+
T Consensus 86 ~~~~~~~g~~~---~~~~~g~~~~~~Rr~~~~~f-~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~ 161 (491)
T 3v8d_A 86 ALSAKAFGHRS---IDPMDGNTTENINDTFIKTL-QGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRV 161 (491)
T ss_dssp HHHHHHHTCCC---CCGGGSSBCCCHHHHHHHHH-SHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHH
T ss_pred HHHHHhcCCcc---cccccchhHHHHHHHHHHHc-CccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHH
Confidence 23344555552 44456999999999999999 888999999999999999987553322211123468999999999
Q ss_pred HHHHHHHHHcCC
Q 040505 217 CGNVIRKIMFSR 228 (228)
Q Consensus 217 t~dii~~~~fG~ 228 (228)
++++++.++||.
T Consensus 162 ~~~~~~~~~fG~ 173 (491)
T 3v8d_A 162 MFEAGYLTIFGR 173 (491)
T ss_dssp HHHHHHHHHHCB
T ss_pred HHHHHHHHHcCc
Confidence 999999999983
No 22
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.84 E-value=5.5e-21 Score=158.27 Aligned_cols=150 Identities=16% Similarity=0.173 Sum_probs=107.8
Q ss_pred CCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCC-CCCCchh-h
Q 040505 62 KPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVF-ASRPLTM-G 139 (228)
Q Consensus 62 ~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~-~~~~~~~-~ 139 (228)
...||||+++|++||++++..+ .+.++.++++ ||+ |+++++++.+.++++||+.+++++.++ .| .+.+... .
T Consensus 22 ~eppPgP~~~P~iG~~~~~~~~--p~~~~~~l~~-yGp-v~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~ 95 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRLARD--PLAFMSQLRD-HGD-VVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESL 95 (467)
T ss_dssp CBCCEECCCCSTTHHHHHHHHC--HHHHHHHHGG-GCS-EEEEEETTEEEEEECSHHHHHHHHHCT--TC----------
T ss_pred CCCCCCCCCCCcccchHHhccC--HHHHHHHHHH-hCC-EEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHH
Confidence 5568999999999999988653 3778888887 998 999999999999999999999999765 44 3222221 2
Q ss_pred hhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHH
Q 040505 140 TEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGN 219 (228)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~d 219 (228)
...++.. + ++..+|+.|+++|++++++| +.++++.+.+.+.++++++++.|.+ +.++|+.+++..+++|
T Consensus 96 ~~~~g~~--~-l~~~dg~~h~~~R~~l~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~-------~~~~d~~~~~~~~~~~ 164 (467)
T 3dbg_A 96 EGLLGKE--G-VATANGPLHRRQRRTIQPAF-RLDAIPAYGPIMEEEAHALTERWQP-------GKTVDATSESFRVAVR 164 (467)
T ss_dssp -----------------------CGGGHHHH-STTTSTTTHHHHHHHHHHHHHHSCT-------TSCEEHHHHHHHHHHH
T ss_pred HHhcCCC--C-cccCCcHHHHHHHHHhhhhh-CHHHHHHHHHHHHHHHHHHHHHhcc-------CCcCcHHHHHHHHHHH
Confidence 2223312 2 56677999999999999999 8888999999999999999998832 2389999999999999
Q ss_pred HHHHHHcCC
Q 040505 220 VIRKIMFSR 228 (228)
Q Consensus 220 ii~~~~fG~ 228 (228)
+++.++||.
T Consensus 165 vi~~~~~g~ 173 (467)
T 3dbg_A 165 VAARCLLRG 173 (467)
T ss_dssp HHHHHHSCS
T ss_pred HHHHHHhCC
Confidence 999999984
No 23
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.82 E-value=4.9e-20 Score=151.41 Aligned_cols=155 Identities=15% Similarity=0.091 Sum_probs=110.6
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEe-cCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRL-GNVHVIPVTSPEIALEFLKVHDSVFASRPLTM 138 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~-~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~ 138 (228)
+..+.||||+++|++|++....... .+..+.++ ++||| |+++++ ++.+.++++||+.+++++.++ .|.+++...
T Consensus 23 ~~~~~~PGP~~~p~lG~~~~~~~~~-p~~~~~~l-~~yGp-v~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~ 97 (436)
T 2cd8_A 23 RTQQGTTASPPVLDLGALGQDFAAD-PYPTYARL-RAEGP-AHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNS 97 (436)
T ss_dssp -----------CCBHHHHHHHHHHC-CHHHHHHH-HTTCS-EEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGC
T ss_pred hhccCCCCCCccccCCCCCcccccC-hHHHHHHH-HHhCC-eeeeccCCCCeEEEEcCHHHHHHHHcCC--CCccccccc
Confidence 3345689999999999986322222 37788888 99998 999997 778899999999999999765 465554311
Q ss_pred hhhh----ccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-
Q 040505 139 GTEY----LSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA- 213 (228)
Q Consensus 139 ~~~~----~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~- 213 (228)
.... ...+ .+ ++..+|+.|+++||+++++| +.++++.+.+.+.++++++++.|.+. .+.++|+.+++
T Consensus 98 ~~~~~~~~~~~~-~~-l~~~dg~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~-----~~~~vd~~~~~~ 169 (436)
T 2cd8_A 98 TTPLTEAEAALN-HN-MLESDPPRHTRLRKLVAREF-TMRRVELLRPRVQEIVDGLVDAMLAA-----PDGRADLMESLA 169 (436)
T ss_dssp SSCCCTTGGGTC-CS-GGGCCTTHHHHHHHHHGGGS-SHHHHHTTHHHHHHHHHHHHHHHHTC-----TTSCEEHHHHTT
T ss_pred cccccccccccc-cc-ccccCchHHHHHHHHhHHhh-CHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCCcchHHHHH
Confidence 1111 1111 23 55677999999999999999 88889999999999999999999641 12379999987
Q ss_pred HHHHHHHHHHHHcCC
Q 040505 214 RRYCGNVIRKIMFSR 228 (228)
Q Consensus 214 ~~~t~dii~~~~fG~ 228 (228)
..+++|+|+. +||.
T Consensus 170 ~~~~~~vi~~-~~G~ 183 (436)
T 2cd8_A 170 WPLPITVISE-LLGV 183 (436)
T ss_dssp THHHHHHHHH-HHTC
T ss_pred HHHHHHHHHH-HhCC
Confidence 5799999998 6883
No 24
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=99.80 E-value=1.3e-19 Score=151.05 Aligned_cols=165 Identities=11% Similarity=0.169 Sum_probs=123.1
Q ss_pred cCCCCCCCCCCCCcccccccccccC---CCCchHHHHHHHHHhCCceEEEEecCeeE-------EEEcCHHHHHHHHHhc
Q 040505 58 RNKRKPLPPGPAPWPIVGSLPEMWR---NKPTFKWIHGLMRELNTNICCIRLGNVHV-------IPVTSPEIALEFLKVH 127 (228)
Q Consensus 58 ~~~~~~~pPgP~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~~v~~~~~~~~~~-------v~i~~p~~~~~vl~~~ 127 (228)
...|.+.||||+++|++|++.++.. ....+.++.++++|||++||++++++.+. +++++++..+.++.+.
T Consensus 23 ~~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~ 102 (495)
T 3dsk_A 23 KDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVD 102 (495)
T ss_dssp -CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccc
Confidence 3467788999999999999987751 23347899999999996699999988777 6777887766666332
Q ss_pred C----CCCCCCCchhhhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCC
Q 040505 128 D----SVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNV 203 (228)
Q Consensus 128 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~ 203 (228)
. ..+........ ..++......++..+|+.|+++|+++.+.| +.. .+.+.+.++++++++++.|.+....++
T Consensus 103 ~v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~~~f-~~~-~~~~~~~i~~~~~~ll~~~~~~~~~~~- 178 (495)
T 3dsk_A 103 KVEKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLLFFLL-KSS-RNRIFPEFQATYSELFDSLEKELSLKG- 178 (495)
T ss_dssp TEECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHHHHHH-HHT-TTTHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred cccccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHHHHHhccCC-
Confidence 1 11211111112 445533233355567999999999999999 555 489999999999999999976544333
Q ss_pred CccccHHHHHHHHHHHHHHHHHcCC
Q 040505 204 DSVINVRLVARRYCGNVIRKIMFSR 228 (228)
Q Consensus 204 ~~~~d~~~~~~~~t~dii~~~~fG~ 228 (228)
++|+.+++..+++++++.++||.
T Consensus 179 --~vdl~~~~~~~~~~~i~~~~~G~ 201 (495)
T 3dsk_A 179 --KADFGGSSDGTAFNFLARAFYGT 201 (495)
T ss_dssp --SEESHHHHHHHHHHHHHHHHHSC
T ss_pred --CccHHHHHHHHHHHHHHHHHcCC
Confidence 89999999999999999999984
No 25
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.79 E-value=5.5e-19 Score=145.71 Aligned_cols=138 Identities=15% Similarity=0.151 Sum_probs=109.8
Q ss_pred CCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh--hhhhccC--CccceeecCCChhH
Q 040505 84 KPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTM--GTEYLSG--GFLSIAVVPWGQQW 159 (228)
Q Consensus 84 ~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~g~~w 159 (228)
...+..+.+|+++||| |+++++++.+.|+++||+.+++++.+ ..+.+++... ....++. .+.+++++.+|+.|
T Consensus 10 ~~~~~~~~~~~~kyG~-v~~~~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 10 RVLQDVFLDWAKKYGP-VVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCHHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred chHHHHHHHHHHHhCC-eEEEEeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 3457889999999998 99999999999999999999999953 3344433211 1111111 11234555679999
Q ss_pred HHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHHHHHHHcCC
Q 040505 160 KKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMFSR 228 (228)
Q Consensus 160 ~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~dii~~~~fG~ 228 (228)
+++||+++++| +.++++.+.+.+.++++++++.|.+..+. +.++|+.+++..+++|+|+.++||.
T Consensus 87 ~~~Rr~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~~~~---~~~vd~~~~~~~~~~dvi~~~~fG~ 151 (456)
T 3mdm_A 87 HKQRRVIDLAF-SRSSLVSLMETFNEKAEQLVEILEAKADG---QTPVSMQDMLTYTAMDILAKAAFGM 151 (456)
T ss_dssp HHHHHHHGGGG-SHHHHHTTHHHHHHHHHHHHHHHHHTCSS---SSCEEHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHhhccccc-CHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCeeeHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999 88889999999999999999999876443 3489999999999999999999994
No 26
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.79 E-value=5.7e-20 Score=148.88 Aligned_cols=143 Identities=12% Similarity=0.106 Sum_probs=117.5
Q ss_pred CCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCC-chh-hhhhcc
Q 040505 67 GPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRP-LTM-GTEYLS 144 (228)
Q Consensus 67 gP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~-~~~-~~~~~~ 144 (228)
++..+|++||++++..+ .+.++.+++++||| |++ ++++.+.++++||+.+++++.++ .|.+++ ... .....+
T Consensus 3 ~~~~~p~iGnl~~~~~~--p~~~~~~l~~~yGp-v~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~g 76 (389)
T 1n97_A 3 RLSLREAWPYLKDLQQD--PLAVLLAWGRAHPR-LFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLTG 76 (389)
T ss_dssp ECCHHHHHHHHHHHHHC--HHHHHHHHHHHCSE-EEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHHC
T ss_pred ccccccccccHHHHhhC--hHHHHHHHHHHcCC-eeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHhC
Confidence 44568999999888543 37889999999998 999 88888999999999999999765 666654 221 222333
Q ss_pred CCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHHHHHH
Q 040505 145 GGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKI 224 (228)
Q Consensus 145 ~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~dii~~~ 224 (228)
.+ ++..+|+.|+++|+.++++| +.++++.+.+.+.++++++++.|. + .++|+.+++..+++|+|+++
T Consensus 77 ~~----l~~~~g~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~-----~---~~~dl~~~~~~~~~~vi~~~ 143 (389)
T 1n97_A 77 RG----LLTDWGESWKEARKALKDPF-LPKNVRGYREAMEEEARAFFGEWR-----G---EERDLDHEMLALSLRLLGRA 143 (389)
T ss_dssp SS----TTTCCHHHHHHHHHHHCGGG-SHHHHHTTHHHHHHHHHHHHHTCC-----S---CCEEHHHHHHHHHHHHHHHH
T ss_pred Cc----cccCCcHHHHHHHHHhCccc-CHHHHHHHHHHHHHHHHHHHHHcc-----C---CcCcHHHHHHHHHHHHHHHH
Confidence 32 45567999999999999999 888899999999999999998884 2 28999999999999999999
Q ss_pred HcCC
Q 040505 225 MFSR 228 (228)
Q Consensus 225 ~fG~ 228 (228)
+||.
T Consensus 144 ~fG~ 147 (389)
T 1n97_A 144 LFGK 147 (389)
T ss_dssp HHSS
T ss_pred HcCC
Confidence 9994
No 27
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.78 E-value=2.3e-19 Score=149.28 Aligned_cols=162 Identities=11% Similarity=0.047 Sum_probs=116.0
Q ss_pred CCCCCCCCCCC-cccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCC-CCCCCCch
Q 040505 60 KRKPLPPGPAP-WPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDS-VFASRPLT 137 (228)
Q Consensus 60 ~~~~~pPgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~-~~~~~~~~ 137 (228)
...+.||||++ +|++||++++.. ..+..+.+++++||+ |+++++++.+.++++||+.+++++.++.. .+.+....
T Consensus 10 ~~~~~pPgp~~~~P~iG~~~~~~~--~~~~~~~~~~~kyG~-i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~~ 86 (491)
T 3dax_A 10 RQTGEPPLENGLIPYLGCALQFGA--NPLEFLRANQRKHGH-VFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFA 86 (491)
T ss_dssp CCTTCCCEEEEEESCTTTTGGGTC--CHHHHHHHHHHHHCS-EEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHHH
T ss_pred cCCCCCCcCCCcccchhhHHHHhh--CHHHHHHHHHHhcCC-eEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHHH
Confidence 44567899988 899999998854 347889999999998 99999999999999999999999965431 22221111
Q ss_pred hhhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHH
Q 040505 138 MGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYC 217 (228)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t 217 (228)
.....++.+ .+...+|+.|+++|+.+.+.| +.+.++.+.+.+.+++.+.++..............+|+...+..++
T Consensus 87 ~~~~~~g~~---~~~~~~g~~w~~~r~~~~~~f-~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i 162 (491)
T 3dax_A 87 TSAKAFGHR---SIDPMDGNTTENINDTFIKTL-QGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVM 162 (491)
T ss_dssp HHHHHHTCC---CCCGGGTSBCCCHHHHHHHHH-SHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHH
T ss_pred HHHHHcCCC---cccccchhHHHHHHHHHHHhc-CcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHH
Confidence 122334433 231455889999999999988 7777888888888887777665432210011223678999999999
Q ss_pred HHHHHHHHcCC
Q 040505 218 GNVIRKIMFSR 228 (228)
Q Consensus 218 ~dii~~~~fG~ 228 (228)
+++++.++||.
T Consensus 163 ~~~~~~~~fG~ 173 (491)
T 3dax_A 163 FEAGYLTIFGR 173 (491)
T ss_dssp HHHHHHHHHCB
T ss_pred HHHhHHHHcCc
Confidence 99999999983
No 28
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.77 E-value=3.7e-18 Score=138.85 Aligned_cols=153 Identities=10% Similarity=-0.005 Sum_probs=112.0
Q ss_pred CCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEec-CeeEEEEcCHHHHHHHHHhcC-CCCCCCCchhhhh
Q 040505 64 LPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG-NVHVIPVTSPEIALEFLKVHD-SVFASRPLTMGTE 141 (228)
Q Consensus 64 ~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~-~~~~v~i~~p~~~~~vl~~~~-~~~~~~~~~~~~~ 141 (228)
.||||+++|++|++.+ . .+..+.++. +||| |+++..+ +.+.+++++++.+++++.++. ..+..++......
T Consensus 2 ~pPGp~~~P~~g~~~~----~-p~~~~~~l~-~~Gp-v~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~ 74 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP----E-PPAEFAKLR-ATNP-VSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELS 74 (404)
T ss_dssp ----CCBSSCCCSSTT----S-CCTHHHHHH-HHCS-EEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCS
T ss_pred CCCCCCCCCCCCCcCC----C-ccHHHHHHH-HhCC-eeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCcccc
Confidence 3899999999999875 2 266678885 6998 9999874 566777999999999997652 2222222211110
Q ss_pred ----hccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHH
Q 040505 142 ----YLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYC 217 (228)
Q Consensus 142 ----~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t 217 (228)
....+..+ ++..+|+.|+++||.++++| +.++++.+.+.++++++++++.|.+..+ .+.++|+.+.+...+
T Consensus 75 ~~~~~~~~~~~~-l~~~~g~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~~~---~~~~~d~~~~~~~~~ 149 (404)
T 1jfb_A 75 ASGKQAAKAKPT-FVDMDPPEHMHQRSMVEPTF-TPEAVKNLQPYIQRTVDDLLEQMKQKGC---ANGPVDLVKEFALPV 149 (404)
T ss_dssp HHHHHHTTSCCC-GGGCCTTHHHHHHTTTGGGG-SHHHHHHHHHHHHHHHHHHHHHHHHHCS---TTSCEEHHHHTTTHH
T ss_pred ccccchhcccCc-ccccCchhHHHHHHHhhhhc-CHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCccHHHHHHHHH
Confidence 00111122 55567999999999999999 8888999999999999999999976543 234799999999999
Q ss_pred HHHHHHHHcCC
Q 040505 218 GNVIRKIMFSR 228 (228)
Q Consensus 218 ~dii~~~~fG~ 228 (228)
.++++..+||.
T Consensus 150 ~~~i~~~~~G~ 160 (404)
T 1jfb_A 150 PSYIIYTLLGV 160 (404)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHcCC
Confidence 99999999984
No 29
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.75 E-value=6.9e-18 Score=139.74 Aligned_cols=164 Identities=10% Similarity=0.112 Sum_probs=118.8
Q ss_pred CCCCCCCCCCCCccccccccccc----CCCCchHHHHHHHHHhCCceEEEEecC-------eeEEEEcCHHHHHHHHHh-
Q 040505 59 NKRKPLPPGPAPWPIVGSLPEMW----RNKPTFKWIHGLMRELNTNICCIRLGN-------VHVIPVTSPEIALEFLKV- 126 (228)
Q Consensus 59 ~~~~~~pPgP~~~p~~G~~~~~~----~~~~~~~~~~~~~~kyG~~v~~~~~~~-------~~~v~i~~p~~~~~vl~~- 126 (228)
..|.+.+|||.++|++|++.++. ..+..+.++.++++|||++||++++++ ...|.++|++..+.++..
T Consensus 5 ~~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~ 84 (473)
T 3dan_A 5 SKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVS 84 (473)
T ss_dssp GSCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCc
Confidence 36778899999999999998764 221347889999999996699999863 345556666655455421
Q ss_pred ---cCCCCCCCCchhhhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCC
Q 040505 127 ---HDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNV 203 (228)
Q Consensus 127 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~ 203 (228)
+...+..... .....+++.....++..+|+.|+++|+++.+.| +.+ ++.+.+.++++++++++.|.+....++
T Consensus 85 ~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~h~~~R~~~~~~f-~~~-~~~~~~~i~~~~~~ll~~~~~~~~~~~- 160 (473)
T 3dan_A 85 KVEKKDLFTGTYM-PSTKLTGGYRVLSYLDPSEPRHAQLKNLLFFML-KNS-SNRVIPQFETTYTELFEGLEAELAKNG- 160 (473)
T ss_dssp TEECSSCTTSSSC-CCGGGGTTSCCGGGCCTTSHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred ceecccccccccc-CCccccCCCcceeeeCCCcHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHHHHHhccCC-
Confidence 1111211111 112334432223356677999999999999999 664 899999999999999999976544333
Q ss_pred CccccHHHHHHHHHHHHHHHHHcCC
Q 040505 204 DSVINVRLVARRYCGNVIRKIMFSR 228 (228)
Q Consensus 204 ~~~~d~~~~~~~~t~dii~~~~fG~ 228 (228)
++|+.+++..+++++++.++||.
T Consensus 161 --~vdl~~~~~~~~~~~i~~~~~G~ 183 (473)
T 3dan_A 161 --KAAFNDVGEQAAFRFLGRAYFNS 183 (473)
T ss_dssp --CEECHHHHHHHHHHHHHHHHHSC
T ss_pred --cccHHHHHHHHHHHHHHHHHcCC
Confidence 89999999999999999999994
No 30
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.74 E-value=1.9e-17 Score=135.18 Aligned_cols=141 Identities=13% Similarity=-0.003 Sum_probs=110.9
Q ss_pred cccccccccccCCCCchHHHHHHHHHhC-CceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCch--hh-hhhccCC
Q 040505 71 WPIVGSLPEMWRNKPTFKWIHGLMRELN-TNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLT--MG-TEYLSGG 146 (228)
Q Consensus 71 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG-~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~--~~-~~~~~~~ 146 (228)
.|++||+..+..+ .+.++.+++++|| | |+++..++.+.+++++|+.++.++ +. ..|...... .. ...+|.+
T Consensus 8 ~P~lG~~~~~~~~--p~~~~~~l~~~yg~p-v~~~~~~g~~~v~v~~~~~~~~l~-~~-~~~~~~~~~~~~~~~~~~g~~ 82 (417)
T 1izo_A 8 DKSLDNSLTLLKE--GYLFIKNRTERYNSD-LFQARLLGKNFICMTGAEAAKVFY-DT-DRFQRQNALPKRVQKSLFGVN 82 (417)
T ss_dssp CCCTTHHHHHHHH--GGGHHHHHHHHTTSS-EEEEEETTEEEEEECSHHHHHHHT-CT-TTEECTTCSCHHHHTTTTCTT
T ss_pred CCccchHHHHhhC--cHHHHHHHHHHhCCC-eEEeecCCccEEEECCHHHHHHHh-cc-cccccccccccchhhhhcccc
Confidence 3899999988653 3778999999998 7 999999888999999999998654 32 334333211 11 2233322
Q ss_pred ccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHHHHHHHc
Q 040505 147 FLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMF 226 (228)
Q Consensus 147 ~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~dii~~~~f 226 (228)
+ ++..+|+.|+++|++++++| +.++++.+.+.+.+.++++++.|.+ +.++|+.+++..+++|+|+++ |
T Consensus 83 --~-l~~~dg~~h~~~R~~~~~~f-~~~~l~~~~~~i~~~~~~l~~~l~~-------~~~~dl~~~~~~~~~~vi~~~-~ 150 (417)
T 1izo_A 83 --A-IQGMDGSAHIHRKMLFLSLM-TPPHQKRLAELMTEEWKAAVTRWEK-------ADEVVLFEEAKEILCRVACYW-A 150 (417)
T ss_dssp --C-GGGCCHHHHHHHHHHHHHTS-SHHHHHHHHHHHHHHHHHHHHHHTT-------SSEEEHHHHHHHHHHHHHHHH-H
T ss_pred --c-eeecCChHHHHHHHHhhhhc-CHHHHHHHHHHHHHHHHHHHHHHhc-------CCCeeHHHHHHHHHHHHHHHH-c
Confidence 2 55677999999999999999 8989999999999999999998843 237999999999999999998 5
Q ss_pred CC
Q 040505 227 SR 228 (228)
Q Consensus 227 G~ 228 (228)
|.
T Consensus 151 G~ 152 (417)
T 1izo_A 151 GV 152 (417)
T ss_dssp TC
T ss_pred CC
Confidence 73
No 31
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.74 E-value=8.1e-18 Score=140.24 Aligned_cols=156 Identities=8% Similarity=-0.019 Sum_probs=111.6
Q ss_pred CCCCCCCCCCC-cccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCc--
Q 040505 60 KRKPLPPGPAP-WPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPL-- 136 (228)
Q Consensus 60 ~~~~~pPgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~-- 136 (228)
+..+.||||++ +|++||++++..+ .+.++.+++++||+ |+++++++.+.++++||+++++++.++...+..++.
T Consensus 15 ~~~~~PPgp~~~~P~iG~~~~~~~~--~~~~~~~l~~kYG~-i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~ 91 (498)
T 3b6h_A 15 RRPGEPPLDLGSIPWLGYALDFGKD--AASFLTRMKEKHGD-IFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAI 91 (498)
T ss_dssp CCTTCCCEECCSSTTTBTHHHHHHC--HHHHHHHHHHHHCS-EEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHH
T ss_pred cCCCCCCCCCCCCcchhhHHHhccC--HHHHHHHHHHHcCC-eEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHH
Confidence 55677999998 8999999988643 37889999999998 999999999999999999999999665431322221
Q ss_pred hhhhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHH
Q 040505 137 TMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRY 216 (228)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~ 216 (228)
......++.+ .+..+|+.| |+...+.| +.+.++.+.+.+.+++.+.++...... ......+++...+..+
T Consensus 92 ~~~~~~~g~~----~~~~~~~~~---rr~~~~~~-~~~~l~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~l~~~~~~v 161 (498)
T 3b6h_A 92 FLMERIFDVQ----LPHYSPSDE---KARMKLTL-LHRELQALTEAMYTNLHAVLLGDATEA--GSGWHEMGLLDFSYSF 161 (498)
T ss_dssp HHHHHTSCCC----CTTCCHHHH---HHHHHTTS-SHHHHHHHHHHHHHHHHHHHHHHHHHH--CSSCEEEEHHHHHHHH
T ss_pred HHHHHHcCCC----ccccCHHHH---HHHHHHhh-chHhHHHHHHHHHHHHHHHHhhccccc--CCCcceecHHHHHHHH
Confidence 1222334433 234446666 45555677 667778887777777776666543221 1123357899999999
Q ss_pred HHHHHHHHHcCC
Q 040505 217 CGNVIRKIMFSR 228 (228)
Q Consensus 217 t~dii~~~~fG~ 228 (228)
++++++.++||.
T Consensus 162 i~~~~~~~~fG~ 173 (498)
T 3b6h_A 162 LLRAGYLTLYGI 173 (498)
T ss_dssp HHHHHHHHHHCB
T ss_pred HHHHHHHhhcCc
Confidence 999999999983
No 32
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.73 E-value=2.9e-17 Score=133.98 Aligned_cols=144 Identities=10% Similarity=-0.015 Sum_probs=110.2
Q ss_pred CCCCCCcccccccccccCCCCchHHHHHHHHHh-CCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh--h-h
Q 040505 65 PPGPAPWPIVGSLPEMWRNKPTFKWIHGLMREL-NTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTM--G-T 140 (228)
Q Consensus 65 pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~ky-G~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~--~-~ 140 (228)
|||| |++||+..+..+ .+.++.+++++| || |+++..++.+.+++++|+.++ ++.+. ..|.+.+..+ . .
T Consensus 4 pPg~---P~iG~~~~~~~~--p~~~~~~l~~~y~gp-v~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~ 75 (415)
T 3awm_A 4 TPHT---KGPDETLSLLAD--PYRFISRQCQRLGAN-AFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQK 75 (415)
T ss_dssp --------CCCCHHHHHHS--TTTHHHHHHHHHTSS-EEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHT
T ss_pred CCCC---CccchHHHHHhC--hHHHHHHHHHHhCCC-eEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhh
Confidence 6776 899999988654 377899999999 67 999998888999999999987 66433 3454432211 1 1
Q ss_pred hhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHH
Q 040505 141 EYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNV 220 (228)
Q Consensus 141 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~di 220 (228)
..++.+ + ++..+|+.|+++|+++.++| +.+.++.+.+.+.+.++++++.|.+. + ++|+.+++..+++++
T Consensus 76 ~~~g~~--~-l~~~dg~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~ll~~~~~~----~---~vdl~~~~~~~~~~v 144 (415)
T 3awm_A 76 TLLGQG--G-VQGLDGETHRHRKQMFMGLM-TPERVRALAQLFEAEWRRAVPGWTRK----G---EIVFYDELHEPLTRA 144 (415)
T ss_dssp TTSCSS--S-GGGCCHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHHHHHH----S---EEEHHHHHHHHHHHH
T ss_pred hccCCc--c-eeecCcHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHhhccC----C---cEeHHHHHHHHHHHH
Confidence 233322 2 55677999999999999999 88899999999999999999999642 2 799999999999999
Q ss_pred HHHHHcCC
Q 040505 221 IRKIMFSR 228 (228)
Q Consensus 221 i~~~~fG~ 228 (228)
|+++ ||.
T Consensus 145 i~~~-~G~ 151 (415)
T 3awm_A 145 VCAW-AGV 151 (415)
T ss_dssp HHHH-HTC
T ss_pred HHHH-cCC
Confidence 9998 773
No 33
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.73 E-value=3.4e-17 Score=133.30 Aligned_cols=147 Identities=12% Similarity=0.096 Sum_probs=111.2
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEE----e-cC-eeEEEEcCHHHHHHHH-HhcCCCCC
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIR----L-GN-VHVIPVTSPEIALEFL-KVHDSVFA 132 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~----~-~~-~~~v~i~~p~~~~~vl-~~~~~~~~ 132 (228)
...+.||||+++|+. + ....+..+.++ ++||| |++++ + ++ .+.++++||+.+++++ .++ .+.
T Consensus 7 ~~~~lppgp~~~p~~-----~--~~~p~~~~~~l-~~yGp-v~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~ 75 (406)
T 1ued_A 7 QVAPLLREPANFQLR-----T--NCDPHEDNFGL-RAHGP-LVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFT 75 (406)
T ss_dssp SCCCEEECCTTTTCE-----E--TTEECHHHHHH-HTTCS-EEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEE
T ss_pred CCCCCcccCcccCCC-----C--CCCcHHHHHHH-HHhCC-eeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--ccc
Confidence 345679999989876 2 22337788999 99998 99999 5 77 8999999999999999 443 244
Q ss_pred CCCch--h---hhh-hccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCcc
Q 040505 133 SRPLT--M---GTE-YLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSV 206 (228)
Q Consensus 133 ~~~~~--~---~~~-~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 206 (228)
+++.. . ... .... .+ ++..+|+.|+++||+++++| +.+.++.+.+.+.++++++++.|.+. + .+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~--~~-l~~~~g~~~~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~---g---~~ 145 (406)
T 1ued_A 76 TRPQFTQSKSGAHVEAQFV--GQ-ISTYDPPEHTRLRKMLTPEF-TVRRIRRMEPAIQSLIDDRLDLLEAE---G---PS 145 (406)
T ss_dssp CCCCC---------CGGGT--TC-GGGCCTTHHHHHHHHHGGGS-SHHHHHHHHHHHHHHHHHHHHHHHHH---C---TT
T ss_pred ccccccccccccccccccc--cc-cccCCCHHHHHHHHHhhhhh-CHHHHHHHHHHHHHHHHHHHHHHHhc---C---CC
Confidence 43321 1 110 1111 12 55567999999999999999 88889999999999999999999731 2 27
Q ss_pred ccHHHHHHH-HHHHHHHHHHcCC
Q 040505 207 INVRLVARR-YCGNVIRKIMFSR 228 (228)
Q Consensus 207 ~d~~~~~~~-~t~dii~~~~fG~ 228 (228)
+|+.+++.. +++|+|+. +||.
T Consensus 146 ~d~~~~~~~~~~~~vi~~-~~G~ 167 (406)
T 1ued_A 146 ADLQGLFADPVGAHALCE-LLGI 167 (406)
T ss_dssp EEHHHHTHHHHHHHHHHH-HHTC
T ss_pred eeHHHHHHHHhHHHHHHH-HcCC
Confidence 999998875 99999994 6884
No 34
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.71 E-value=7.7e-18 Score=139.52 Aligned_cols=155 Identities=11% Similarity=0.028 Sum_probs=113.4
Q ss_pred CCCCCCCCCCC-cccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCc--
Q 040505 60 KRKPLPPGPAP-WPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPL-- 136 (228)
Q Consensus 60 ~~~~~pPgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~-- 136 (228)
++.+.||||++ +|++||++++..+ .+.++.+++++||+ |+++++++.+.++++||+.+++++.++.. +..++.
T Consensus 15 ~~~~~pPgp~~~~P~iG~~~~~~~~--~~~~~~~l~~~yG~-v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~ 90 (475)
T 3b98_A 15 RRRNEPPLDKGMIPWLGHALEFGKD--AAKFLTRMKEKHGD-IFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQ 90 (475)
T ss_dssp CCTTCCCEECCSSTTTBTHHHHHHC--HHHHHHHHHHHHCS-EEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHH
T ss_pred cCCCCCCCCCCCcchHHhHHHHhhC--HHHHHHHHHHHhCC-eEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHH
Confidence 55678999998 9999999988543 37889999999998 99999999999999999999999965431 322221
Q ss_pred hhhhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHH
Q 040505 137 TMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRY 216 (228)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~ 216 (228)
......++.+ ++..+|+.| |+.+.++| +.+.++.+.+.+.++++++++.+....+ ......+++...+..+
T Consensus 91 ~~~~~~~g~~----~~~~~~~~~---R~~~~~~f-~~~~l~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~ 161 (475)
T 3b98_A 91 VLMKRIFNMI----LPSHNPESE---KKRAEMHF-QGASLTQLSNSMQNNLRLLMTPSEMGLK-TSEWKKDGLFNLCYSL 161 (475)
T ss_dssp HHHHHTTCCC----CTTCCHHHH---HHHHHHHT-SHHHHHHHHHHHHHHHHHHSSTTTTTCS-SCSCEEEEHHHHHHHH
T ss_pred HHHHHHhCCC----CCCCChHHH---HHHHHHHc-ChhhHHHHHHHHHHHHHHHHhhcccccC-CCCceeehHHHHHHHH
Confidence 1122233333 334446654 67777888 7888899999999999888876543210 1122357888888999
Q ss_pred HHHHHHHHHcC
Q 040505 217 CGNVIRKIMFS 227 (228)
Q Consensus 217 t~dii~~~~fG 227 (228)
++++++...||
T Consensus 162 ~~~~~~~~~~g 172 (475)
T 3b98_A 162 LFKTGYLTVFG 172 (475)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHhhhheeC
Confidence 99998888887
No 35
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.69 E-value=3e-16 Score=127.94 Aligned_cols=152 Identities=13% Similarity=0.008 Sum_probs=108.3
Q ss_pred CCCCCCCCCcccccccccccCCCCchHHHHHHHHHh-CCceEEEEe-cCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 62 KPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMREL-NTNICCIRL-GNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 62 ~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~ky-G~~v~~~~~-~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
.+.||+|+++|.+..-..+. ...+..+.++ ++| || |+++.+ ++.+.++++||+.+++++.++. +.+++....
T Consensus 4 ~~~~~~~~~~P~~~~~~~~~--~~p~~~~~~l-~~~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~ 77 (412)
T 2zbx_A 4 TATTPQTTDAPAFPSNRSCP--YQLPDGYAQL-RDTPGP-LHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDN 77 (412)
T ss_dssp ----CCCCSSCBSSCCCSST--TSCCHHHHHH-HHSSSS-EEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTT
T ss_pred CCCCCCCCCCCCCCCCchhc--cChHHHHHHH-HhcCCC-eEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCccccc
Confidence 34567887777652222332 2337788999 788 98 999997 7889999999999999996542 333322111
Q ss_pred hhhcc-----C--CccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHH
Q 040505 140 TEYLS-----G--GFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLV 212 (228)
Q Consensus 140 ~~~~~-----~--~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~ 212 (228)
...+. . ...+ ++..+|+.|+++||++++.| +.++++.+.+.+.++++++++.|.+. + .++|+.++
T Consensus 78 ~~~~~~~~~~~~~~~~~-l~~~~g~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~---g---~~~d~~~~ 149 (412)
T 2zbx_A 78 FPATSPRFEAVRESPQA-FIGLDPPEHGTRRRMTISEF-TVKRIKGMRPEVEEVVHGFLDEMLAA---G---PTADLVSQ 149 (412)
T ss_dssp SCCCSGGGC----CCCC-GGGCCTTHHHHHHTTTGGGG-SHHHHHHHHHHHHHHHHHHHHHHHHH---C---SCEEHHHH
T ss_pred ccccccccccccccccc-cccCCcHHHHHHHHHhhhhc-CHHHHHHHHHHHHHHHHHHHHHHHhc---C---CCccHHHH
Confidence 11000 0 1123 55567999999999999998 88889999999999999999999742 2 27999998
Q ss_pred HH-HHHHHHHHHHHcCC
Q 040505 213 AR-RYCGNVIRKIMFSR 228 (228)
Q Consensus 213 ~~-~~t~dii~~~~fG~ 228 (228)
+. .+++|+|+. +||.
T Consensus 150 ~~~~~~~~vi~~-~~G~ 165 (412)
T 2zbx_A 150 FALPVPSMVICR-LLGV 165 (412)
T ss_dssp TTTHHHHHHHHH-HHTC
T ss_pred HHHHHHHHHHHH-HcCC
Confidence 87 499999997 6883
No 36
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.65 E-value=3.1e-15 Score=121.75 Aligned_cols=148 Identities=14% Similarity=0.074 Sum_probs=109.2
Q ss_pred CCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEe-cCee-EEEEcCHHHHHHHHHhcCCCCCCCCchhhh
Q 040505 63 PLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRL-GNVH-VIPVTSPEIALEFLKVHDSVFASRPLTMGT 140 (228)
Q Consensus 63 ~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~-~~~~-~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~ 140 (228)
+.+|+|+++|+.++.. .+.+.++.+++ +||| |+++.. ++.+ .++++||+.+++++.+ ..|.+++.....
T Consensus 8 ~~~~~~~~~p~~~~~~-----~~p~~~~~~l~-~~Gp-v~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~ 78 (406)
T 1s1f_A 8 QAVPPVRDWPAVDLPG-----SDFDPVLTELM-REGP-VTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQ 78 (406)
T ss_dssp CCSCCEEECCCCCCCT-----TCCCHHHHHHH-HHCS-EEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTT
T ss_pred hhccCCCCCCCCcccc-----cCchHHHHHHH-hcCC-eeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCC
Confidence 4467777788776622 22367778775 7998 999996 5666 9999999999999965 356555432111
Q ss_pred ----hh-ccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-H
Q 040505 141 ----EY-LSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-R 214 (228)
Q Consensus 141 ----~~-~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~ 214 (228)
.. ....+.+ ++..+|+.|+++||+++++| +.++++.+.+.+.++++++++.|.+. ++ ++|+.+.+ .
T Consensus 79 ~~~~~~~~~~~~~~-l~~~dg~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~---~~---~~d~~~~~~~ 150 (406)
T 1s1f_A 79 VTRLAPHFIPARGA-VGFLDPPDHTRLRRSVAAAF-TARGVERVRERSRGMLDELVDAMLRA---GP---PADLTEAVLS 150 (406)
T ss_dssp BCBSSSSCSSCTTS-GGGCCTTHHHHHHHHHHHHH-SHHHHHHHHHHHHHHHHHHHHHHHHH---CS---SEEHHHHTTT
T ss_pred cccccccccccccc-cccCCchHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHHHHhc---CC---CccHHHHHhh
Confidence 11 1111223 45567999999999999999 88889999999999999999999741 22 78998776 4
Q ss_pred HHHHHHHHHHHcCC
Q 040505 215 RYCGNVIRKIMFSR 228 (228)
Q Consensus 215 ~~t~dii~~~~fG~ 228 (228)
.+++|+|+. +||.
T Consensus 151 ~~~~~vi~~-~~G~ 163 (406)
T 1s1f_A 151 PFPIAVICE-LMGV 163 (406)
T ss_dssp HHHHHHHHH-HHTC
T ss_pred HhHHHHHHH-HhCC
Confidence 799999998 5884
No 37
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.65 E-value=1.1e-15 Score=124.84 Aligned_cols=155 Identities=14% Similarity=-0.021 Sum_probs=110.4
Q ss_pred cCCCCCCCCCCCCcccc--cccccccC---CCCchHHHHHHHHHhC--CceEEEEecCeeEEEEcCHHHHHHHHHhcCCC
Q 040505 58 RNKRKPLPPGPAPWPIV--GSLPEMWR---NKPTFKWIHGLMRELN--TNICCIRLGNVHVIPVTSPEIALEFLKVHDSV 130 (228)
Q Consensus 58 ~~~~~~~pPgP~~~p~~--G~~~~~~~---~~~~~~~~~~~~~kyG--~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~ 130 (228)
+.++.++||||.+.|.. +.+-.+.. ..+.+..+.+|+ +|| | |+++.+.+ +.++++||+.+++++.+ ...
T Consensus 6 ~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~p-v~~~~~~g-~~vvv~~~~~v~~vl~~-~~~ 81 (415)
T 2zwu_A 6 IQSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPD-LVWTRCNG-GHWIATRGQLIREAYED-YRH 81 (415)
T ss_dssp -----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCS-EEEECGGG-CEEEECSHHHHHHHHHC-TTT
T ss_pred ccCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCC-eEEecCCC-CeEEEcCHHHHHHHHcC-ccc
Confidence 34677899999988864 43321111 123467788885 799 9 99998333 68999999999999964 345
Q ss_pred CCCCC-chhhhh-hccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCcccc
Q 040505 131 FASRP-LTMGTE-YLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVIN 208 (228)
Q Consensus 131 ~~~~~-~~~~~~-~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d 208 (228)
|.+++ ...... .++ .+.++..+|+.|+++|+++.++| +.++++.+.+.+.++++++++.|.+. + ++|
T Consensus 82 f~~~~~~~~~~~~~~~---~~~l~~~~g~~~~~~R~~~~~~f-~~~~l~~~~~~i~~~~~~l~~~l~~~----~---~~d 150 (415)
T 2zwu_A 82 FSSECPFIPREAGEAY---DFIPTSMDPPEQRQFRALANQVV-GMPVVDKLENRIQELACSLIESLRPQ----G---QCN 150 (415)
T ss_dssp EETTSCSSSHHHHHHC---CCTTTTCCTTTTHHHHHHHHHHH-SHHHHHHHHHHHHHHHHHHHHHHGGG----T---EEE
T ss_pred cCCCcccCCCCccccc---cccCccCCCcHHHHHHHHHHhhh-CHHHHHHHHHHHHHHHHHHHHHHHhc----C---Ccc
Confidence 66665 221111 111 22034456999999999999999 88889999999999999999999642 2 789
Q ss_pred HHHHH-HHHHHHHHHHHHcCC
Q 040505 209 VRLVA-RRYCGNVIRKIMFSR 228 (228)
Q Consensus 209 ~~~~~-~~~t~dii~~~~fG~ 228 (228)
+.+++ ..+++|+|+.+ ||.
T Consensus 151 ~~~~~~~~~~~~vi~~~-~G~ 170 (415)
T 2zwu_A 151 FTEDYAEPFPIRIFMLL-AGL 170 (415)
T ss_dssp HHHHTTTHHHHHHHHHH-HTC
T ss_pred HHHHHHHHHHHHHHHHH-cCC
Confidence 99865 78999999998 984
No 38
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.64 E-value=3.3e-15 Score=122.55 Aligned_cols=153 Identities=11% Similarity=0.037 Sum_probs=110.6
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEE--------ecCeeEEEEcCHHHHHHHHHhcCCCC
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIR--------LGNVHVIPVTSPEIALEFLKVHDSVF 131 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~--------~~~~~~v~i~~p~~~~~vl~~~~~~~ 131 (228)
.....||.|.++++++....- +.+.+.++.++ ++||| |+++. +|+.+.+++++|+.+++++.+. ..|
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~--~~~p~~~~~~l-r~~gP-v~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~f 89 (433)
T 3ivy_A 15 TTVPSPNLPPGFDFTDPAIYA--ERLPVAEFAEL-RSAAP-IWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVF 89 (433)
T ss_dssp -----CCCCTTCCTTCHHHHT--TCCCHHHHHHH-HHHCS-EEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTE
T ss_pred cccCCCCCCCCCCCCCHHHhh--cCCccHHHHHH-HhcCC-EEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhc
Confidence 334556777666666543322 33347888888 88998 99998 4447899999999999999543 556
Q ss_pred CCCCchhhhh--------hccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCC
Q 040505 132 ASRPLTMGTE--------YLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNV 203 (228)
Q Consensus 132 ~~~~~~~~~~--------~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~ 203 (228)
++++...... .....+.+ ++..+|+.|+++|+++++.| +.+.++.+.+.+.++++++++.|.+. +
T Consensus 90 s~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~dg~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~ll~~l~~~----~- 162 (433)
T 3ivy_A 90 SSYENGVIPRFKNDIAREDIEVQRFV-MLNMDAPHHTRLRKIISRGF-TPRAVGRLHDELQERAQKIAAEAAAA----G- 162 (433)
T ss_dssp ESTTTCSCCCCCTTCCHHHHHGGGGS-GGGCCTTHHHHHHHHHGGGS-CHHHHHTTHHHHHHHHHHHHHHHHHH----C-
T ss_pred cCCcccccccccccccccccccccCC-ccccChHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHHHhhC----C-
Confidence 5554322111 11111123 55677999999999999999 89999999999999999999999632 2
Q ss_pred CccccHHHHH-HHHHHHHHHHHHcC
Q 040505 204 DSVINVRLVA-RRYCGNVIRKIMFS 227 (228)
Q Consensus 204 ~~~~d~~~~~-~~~t~dii~~~~fG 227 (228)
++|+.+++ ..+++++|+++ ||
T Consensus 163 --~~d~~~~~~~~~~~~vi~~l-~G 184 (433)
T 3ivy_A 163 --SGDFVEQVSCELPLQAIAGL-LG 184 (433)
T ss_dssp --EEEHHHHTTSHHHHHHHHHH-HT
T ss_pred --CeeHHHHHHHHHHHHHHHHH-cC
Confidence 78998888 99999999996 87
No 39
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=99.61 E-value=1.9e-15 Score=123.82 Aligned_cols=151 Identities=11% Similarity=0.031 Sum_probs=110.9
Q ss_pred CCCCCCCCCCccccccccccc--CC-CCchHHHHHHHHHhCCceEEEEe-cCeeEEEEcCHHHHHHHHHhcCCCCCCCCc
Q 040505 61 RKPLPPGPAPWPIVGSLPEMW--RN-KPTFKWIHGLMRELNTNICCIRL-GNVHVIPVTSPEIALEFLKVHDSVFASRPL 136 (228)
Q Consensus 61 ~~~~pPgP~~~p~~G~~~~~~--~~-~~~~~~~~~~~~kyG~~v~~~~~-~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~ 136 (228)
..++||| ++|++.... .. ...+..+.++.+ ||| |++++. |+.+.+++++|+.+++++.+. ..|++++.
T Consensus 4 ~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~ 75 (428)
T 1cpt_A 4 RATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQP-LAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEG 75 (428)
T ss_dssp TCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCS-EEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSS
T ss_pred ccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCC-eeeccccCCCCeEEEccHHHHHHHHcCc-hhccCccc
Confidence 3556788 788765442 11 223667777766 798 999997 678999999999999999653 45666553
Q ss_pred -hhhh-----h-h---ccC--C-ccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCC
Q 040505 137 -TMGT-----E-Y---LSG--G-FLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNV 203 (228)
Q Consensus 137 -~~~~-----~-~---~~~--~-~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~ 203 (228)
.... . . .|. + ..+ ++..+|+.|+++||+++++| +.++++.+.+.++++++++++.|.+. +
T Consensus 76 ~~~~~~~~~~~~~~~~~g~~~~~~~~-l~~~~g~~~~~~Rr~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~---~-- 148 (428)
T 1cpt_A 76 SEILYDQNNEAFMRSISGGCPHVIDS-LTSMDPPTHTAYRGLTLNWF-QPASIRKLEENIRRIAQASVQRLLDF---D-- 148 (428)
T ss_dssp CSSCCCHHHHHHHHHHTTTSSCSSCC-GGGCCTTHHHHHHHHHHTTS-SHHHHGGGHHHHHHHHHHHHHHHHTS---S--
T ss_pred cccCCcccccchhccccccccccccc-cccCChHHHHHHHHHhhhhh-CHHHHHHHHHHHHHHHHHHHHHHHHh---C--
Confidence 2211 1 2 331 1 123 55567999999999999998 88889999999999999999999642 1
Q ss_pred CccccHHHHH-HHHHHHHHHHHHcCC
Q 040505 204 DSVINVRLVA-RRYCGNVIRKIMFSR 228 (228)
Q Consensus 204 ~~~~d~~~~~-~~~t~dii~~~~fG~ 228 (228)
.++|+.+.+ ..+++|+|+++ ||.
T Consensus 149 -~~~d~~~~~~~~~~~~vi~~~-fG~ 172 (428)
T 1cpt_A 149 -GECDFMTDCALYYPLHVVMTA-LGV 172 (428)
T ss_dssp -SEEEHHHHTTTTHHHHHHHHH-HTC
T ss_pred -CCeehHHHHHhhhHHHHHHHH-cCC
Confidence 278998654 67999999999 984
No 40
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.61 E-value=5.6e-15 Score=120.28 Aligned_cols=130 Identities=8% Similarity=-0.035 Sum_probs=98.7
Q ss_pred chHHHHHHHHHhCCceEEEEe-cCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhhhh---ccC----CccceeecCCCh
Q 040505 86 TFKWIHGLMRELNTNICCIRL-GNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEY---LSG----GFLSIAVVPWGQ 157 (228)
Q Consensus 86 ~~~~~~~~~~kyG~~v~~~~~-~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~g~ 157 (228)
.+..+.+| ++||| |+++++ ++.+.++++||+.+++++.++. +.+++....... +.. ...+ ++..+|+
T Consensus 26 p~~~~~~l-~~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~ 100 (408)
T 3abb_A 26 PPKAYEER-RGESP-LTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFP-LIGVDDP 100 (408)
T ss_dssp CCHHHHHH-CCSSS-EEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCT-TTTCCTT
T ss_pred chHHHHHH-HhcCC-eeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCccccccccc-cccCCch
Confidence 37788999 89998 999997 7889999999999999996532 333321000000 110 0112 5556799
Q ss_pred hHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHH-HHHHHHHHHHHcCC
Q 040505 158 QWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVAR-RYCGNVIRKIMFSR 228 (228)
Q Consensus 158 ~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~-~~t~dii~~~~fG~ 228 (228)
.|+++|+++++.| +.++++.+.+.+.++++++++.|.+. |.++|+.+++. .+++|+|+. +||.
T Consensus 101 ~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~------g~~~d~~~~~~~~~~~~vi~~-~~G~ 164 (408)
T 3abb_A 101 VHARQRRMLIPSF-GVKRMNAIRPRLQSLVDRLLDDMLAK------GPGADLVSAFALPVPSVAICE-LLGV 164 (408)
T ss_dssp HHHHHHHHHGGGG-CHHHHHHHHHHHHHHHHHHHHHHHHT------CSCEEHHHHTTTHHHHHHHHH-HHTC
T ss_pred HHHHHHHHhhhhc-CHHHHHHHHHHHHHHHHHHHHHHHhc------CCCeehHHHHHHHHHHHHHHH-HhCC
Confidence 9999999999999 88889999999999999999999731 23799999886 599999997 6883
No 41
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.61 E-value=3e-15 Score=122.03 Aligned_cols=138 Identities=14% Similarity=0.099 Sum_probs=101.9
Q ss_pred CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh
Q 040505 60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG 139 (228)
Q Consensus 60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~ 139 (228)
++.+.+|||+. + ...+.++.++++ ||| | +.++.+.++++||+.+++++.+. ..|++++....
T Consensus 16 ~pl~~~PGp~~----~--------~~p~~~~~~l~~-~gp-v---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~ 77 (411)
T 2jjn_A 16 TTIDEVPGMAD----E--------TALLDWLGTMRE-KQP-V---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRVI 77 (411)
T ss_dssp -CCCSCCCSSC----H--------HHHHHHHHHHHH-HCS-E---EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGGS
T ss_pred CCCCCCCCccc----c--------cChHHHHHHHHH-hCC-c---ccCCCCeEEECCHHHHHHHHcCc-ccccCcccccC
Confidence 66777888871 1 123677788876 998 8 56667889999999999999754 45666653222
Q ss_pred hhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHH
Q 040505 140 TEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCG 218 (228)
Q Consensus 140 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~ 218 (228)
.. ....+.+ ++..+|+.|+++|+.++++| +.+.++.+.+.++++++++++. + ++ ++|+.+.+ ..+++
T Consensus 78 ~~-~~~~~~~-~~~~~g~~~~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~ll~~-----~-~~---~~d~~~~~~~~~~~ 145 (411)
T 2jjn_A 78 EG-ASPTPGM-IHEIDPPEHRALRKVVSSAF-TPRTISDLEPRIRDVTRSLLAD-----A-GE---SFDLVDVLAFPLPV 145 (411)
T ss_dssp TT-CCCCTTC-GGGCCTTHHHHHHHHHHHHS-CHHHHHTTHHHHHHHHHHHHHT-----S-CS---EEEHHHHTTTHHHH
T ss_pred Cc-ccccccc-cccCCchHHHHHHHHhhhhc-CHHHHHHHHHHHHHHHHHHHhc-----C-CC---ceeHHHHHHHHHHH
Confidence 11 1111123 55567999999999999999 8888999999999999999887 1 12 78998555 68999
Q ss_pred HHHHHHHcCC
Q 040505 219 NVIRKIMFSR 228 (228)
Q Consensus 219 dii~~~~fG~ 228 (228)
|+|+.+ ||.
T Consensus 146 ~vi~~~-fG~ 154 (411)
T 2jjn_A 146 TIVAEL-LGL 154 (411)
T ss_dssp HHHHHH-HTC
T ss_pred HHHHHH-cCC
Confidence 999998 984
No 42
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.60 E-value=5.8e-15 Score=119.22 Aligned_cols=132 Identities=13% Similarity=-0.009 Sum_probs=101.2
Q ss_pred chHHHHHHHHHhCCceEEEEecC----eeEEEEcCHHHHHHHHHhcCCCCCCCCchhhhhhccCCccceeecCCChhHHH
Q 040505 86 TFKWIHGLMRELNTNICCIRLGN----VHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKK 161 (228)
Q Consensus 86 ~~~~~~~~~~kyG~~v~~~~~~~----~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~ 161 (228)
.+..+.++ ++||| |+++.+++ .+.++++||+.+++++ ++...|.+++........... .+.++..+|+.|++
T Consensus 14 p~~~~~~l-r~yGp-v~~~~~~~~~~g~~~vvv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~ 89 (384)
T 3oo3_A 14 PVPEFEEL-QKAGP-LHEYDTEPGMDGRKQWLVTGHDEVRAIL-ADHERFSSMRPVDDEADRALL-PGILQAYDPPDHTR 89 (384)
T ss_dssp ECHHHHHH-HHTCS-EECCCCC------CEEEECCHHHHHHHH-HCTTTEECSCCCC-----CCC-TTCGGGCCTTHHHH
T ss_pred hhHHHHHH-HhcCC-eeecccccccCCCCEEEEcCHHHHHHHH-hCchhccCCcccccccccccc-ccccccCCChhHHH
Confidence 47778888 59998 99999876 8999999999999999 444667666543221111111 12366777999999
Q ss_pred HHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHHHHHHHcCC
Q 040505 162 MRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMFSR 228 (228)
Q Consensus 162 ~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~dii~~~~fG~ 228 (228)
+|+.+++.| +.++++.+.+.+.++++++++.|.+. +.++|+.+++...+.+++...+||.
T Consensus 90 ~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~------~~~~d~~~~~~~~~~~~v~~~~~G~ 149 (384)
T 3oo3_A 90 LRRTVAPAY-SARRMERLRPRIEEIVEECLDDFESV------GAPVDFVRHAAWPIPAYIACEFLGV 149 (384)
T ss_dssp HHHHHGGGG-CHHHHHHHHHHHHHHHHHHHHHHHHS------CSSEEHHHHTTTHHHHHHHHHHHTC
T ss_pred HHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHHHHhc------CCCccHHHHHHHHHHHHHHHHHcCC
Confidence 999999999 89999999999999999999999652 2379999999988777777778883
No 43
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.58 E-value=2e-14 Score=116.86 Aligned_cols=125 Identities=15% Similarity=0.068 Sum_probs=98.9
Q ss_pred hHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh-------hhhhccCCccceeecCCChhH
Q 040505 87 FKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTM-------GTEYLSGGFLSIAVVPWGQQW 159 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~g~~w 159 (228)
+..+.++ ++||| |+++..++.+.+++++|+.+++++.++ ..|++++... .....+.+ ++..+|+.|
T Consensus 16 ~~~~~~~-r~yGp-v~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~g~~h 88 (404)
T 3ejb_B 16 YSFYDTL-RAVHP-IYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQM----MLFQNQPDH 88 (404)
T ss_dssp HHHHHHH-HHHCS-EEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTS----GGGCCTTHH
T ss_pred hHHHHHH-HhhCC-EeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcc----hhhcCCchH
Confidence 6667777 68998 999999999999999999999999765 5566555311 12223333 566779999
Q ss_pred HHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcC
Q 040505 160 KKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFS 227 (228)
Q Consensus 160 ~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG 227 (228)
+++||+++++| +.++++.+.+.+.++++++++.|.+ +..+|+...+ ..+++++++.+ ||
T Consensus 89 ~~~Rr~~~~~f-s~~~l~~~~~~i~~~~~~ll~~l~~-------~~~~d~~~~~~~~~~~~vi~~~-~G 148 (404)
T 3ejb_B 89 RRLRTLASGAF-TPRTTESYQPYIIETVHHLLDQVQG-------KKKMEVISDFAFPLASFVIANI-IG 148 (404)
T ss_dssp HHHHHHHHGGG-SHHHHHTTHHHHHHHHHHHHHTTTT-------TSEEEHHHHTHHHHHHHHHHHH-HT
T ss_pred HHHHHHHHhhc-CHHHHHHHHHHHHHHHHHHHHHhhh-------cCCcchHHHHHHHHHHHHHHHH-cC
Confidence 99999999999 8888999999999999999998853 1268986555 56999999985 77
No 44
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.58 E-value=2.4e-14 Score=116.41 Aligned_cols=129 Identities=15% Similarity=0.091 Sum_probs=99.5
Q ss_pred hHHHHHHHHHhCCceEEEEe-cCeeEEEEcCHHHHHHHHHhcCCCCCCCCc--h-hhhhhccC--CccceeecCCChhHH
Q 040505 87 FKWIHGLMRELNTNICCIRL-GNVHVIPVTSPEIALEFLKVHDSVFASRPL--T-MGTEYLSG--GFLSIAVVPWGQQWK 160 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~-~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~--~-~~~~~~~~--~~~~~~~~~~g~~w~ 160 (228)
+..+.++ ++||| |+++++ ++.+.++++||+.+++++.++ .|.+++. . .....+.. .+.+ ++..+|+.|+
T Consensus 22 ~~~~~~l-~~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~~h~ 96 (403)
T 3aba_A 22 PDGIADI-RAAAP-VTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGS-LLWQDEPEHT 96 (403)
T ss_dssp CTTHHHH-HHHCS-EEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTC-CTTCCTTHHH
T ss_pred hHHHHHH-HhcCC-eeeeccCCCceEEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccc-cccCCchhHH
Confidence 6678888 89998 999997 789999999999999999754 3554421 1 11000111 1223 4556799999
Q ss_pred HHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHH-HHHHHHHHHHHcCC
Q 040505 161 KMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVAR-RYCGNVIRKIMFSR 228 (228)
Q Consensus 161 ~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~-~~t~dii~~~~fG~ 228 (228)
++||+++++| +.+.++.+.+.+.++++++++.|.+ .++ ++|+.+++. .+++|+|+. +||.
T Consensus 97 ~~R~~~~~~f-s~~~l~~~~~~i~~~~~~ll~~l~~---~~~---~~d~~~~~~~~~~~~vi~~-~~G~ 157 (403)
T 3aba_A 97 SDRKLLAKEF-TVRRMQALRPNIQRIVDEHLDAIEA---RGG---PVDLVKTFANAVPSMVISD-LFGV 157 (403)
T ss_dssp HHHHHHHHHS-CHHHHHTTHHHHHHHHHHHHHHHHH---HCS---CEEHHHHTTTHHHHHHHHH-HHTC
T ss_pred HHHHHHHhhc-CHHHHHHHHHHHHHHHHHHHHHHHh---cCC---CccHHHHHHHHHHHHHHHH-HcCC
Confidence 9999999999 8888999999999999999999975 122 789987764 799999998 6883
No 45
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.57 E-value=2.4e-14 Score=116.63 Aligned_cols=129 Identities=12% Similarity=0.014 Sum_probs=100.4
Q ss_pred chHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhh-----hhccCCccceeecCCChhHH
Q 040505 86 TFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGT-----EYLSGGFLSIAVVPWGQQWK 160 (228)
Q Consensus 86 ~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~w~ 160 (228)
.+..+.++ ++||| |+++++++.+.++++||+.+++++.++. |++++..... ......+.+ ++..+|+.|+
T Consensus 22 p~~~~~~l-~~yGp-v~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~~h~ 96 (411)
T 3a4g_A 22 PHPAYAAL-RAEDP-VRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPM-MILMDPPDHT 96 (411)
T ss_dssp CHHHHHHH-HHHCS-EEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCC-GGGCCTTHHH
T ss_pred chHHHHHH-HhcCC-eeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccc-cccCCchHHH
Confidence 37788898 99998 9999999999999999999999997642 6665432110 111111223 4556799999
Q ss_pred HHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcCC
Q 040505 161 KMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFSR 228 (228)
Q Consensus 161 ~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~ 228 (228)
++||+++++| +.++++.+.+.+.++++++++.|.+. .++|+...+ ..+++|+|+.+ ||.
T Consensus 97 ~~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~-------~~vd~~~~~~~~~~~~vi~~~-~G~ 156 (411)
T 3a4g_A 97 RLRKLVGRSF-TVRRMNELEPRITEIADGLLAGLPTD-------GPVDLMREYAFQIPVQVICEL-LGV 156 (411)
T ss_dssp HHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHHSCSS-------SCEEHHHHTTTTHHHHHHHHH-HTC
T ss_pred HHHHHhhhhh-CHHHHHHHHHHHHHHHHHHHHHHHhc-------CCccHHHHHHHHhHHHHHHHH-hCC
Confidence 9999999999 88889999999999999999988431 278997554 68999999975 883
No 46
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.57 E-value=3.2e-14 Score=116.16 Aligned_cols=130 Identities=10% Similarity=0.049 Sum_probs=101.2
Q ss_pred chHHHHHHHHHhCCceEEEEec-CeeEEEEcCHHHHHHHHHhcCCCCCCCCch---h-hhhhc---cCCccceeecCCCh
Q 040505 86 TFKWIHGLMRELNTNICCIRLG-NVHVIPVTSPEIALEFLKVHDSVFASRPLT---M-GTEYL---SGGFLSIAVVPWGQ 157 (228)
Q Consensus 86 ~~~~~~~~~~kyG~~v~~~~~~-~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~---~-~~~~~---~~~~~~~~~~~~g~ 157 (228)
.+..+.+++++ || |+++.++ +.+.+++++|+.+++++.++ .|++++.. . ..... +..+.+ ++..+|+
T Consensus 31 p~~~~~~l~~~-Gp-v~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~dg~ 105 (417)
T 3tyw_A 31 APAEYAALRTD-DP-VARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRP-FIRTDAP 105 (417)
T ss_dssp CCTHHHHHHHT-CT-EEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCC-GGGCCHH
T ss_pred chHHHHHHHhh-CC-eeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccc-hhhcCCc
Confidence 37788999988 98 9999986 58999999999999999765 45543211 1 11111 011123 5666799
Q ss_pred hHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcCC
Q 040505 158 QWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFSR 228 (228)
Q Consensus 158 ~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~ 228 (228)
.|+++|+++++.| +.++++.+.+.+.++++++++.|.+. + .++|+.+++ ..+++++|+.+ ||.
T Consensus 106 ~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~---g---~~~d~~~~~~~~~~~~vi~~~-~G~ 169 (417)
T 3tyw_A 106 EHTRYRRMLLPAF-TVRRVRAMRPAVQARVDEILDGMLAA---G---GPVDLVSAYANAVSTSVICEL-LGI 169 (417)
T ss_dssp HHHHHHHHHGGGG-CHHHHHHTHHHHHHHHHHHHHHHHHH---C---SSEEHHHHTHHHHHHHHHHHH-HTC
T ss_pred HHHHHHHHHHhhh-CHHHHHHHHHHHHHHHHHHHHHHHhh---C---CCcchHHHHHHHHHHHHHHHH-hCC
Confidence 9999999999999 89889999999999999999999762 2 279999988 58999999987 883
No 47
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.57 E-value=1.7e-14 Score=117.35 Aligned_cols=126 Identities=17% Similarity=0.141 Sum_probs=100.0
Q ss_pred chHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCch--h-----------h-hh---hccCCcc
Q 040505 86 TFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLT--M-----------G-TE---YLSGGFL 148 (228)
Q Consensus 86 ~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~--~-----------~-~~---~~~~~~~ 148 (228)
.+..+.++ ++||| |+++++++.+.+++++|+.+++++.++ .|.+++.. . . .. ..+.
T Consensus 16 p~~~~~~l-~~yGp-v~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 88 (404)
T 1z8o_A 16 WYRTYAEL-RETAP-VTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFAT--- 88 (404)
T ss_dssp HHHHHHHH-HHHCS-EEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSS---
T ss_pred cHHHHHHH-HhcCC-eeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccc---
Confidence 37788898 99998 999999889999999999999999764 45555422 1 0 11 0122
Q ss_pred ceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcC
Q 040505 149 SIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFS 227 (228)
Q Consensus 149 ~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG 227 (228)
+ ++..+|+.|+++||.++++| +.+.++.+.+.+.++++++++.|.+ +.++|+.+.+ ..+++|+|+.+ ||
T Consensus 89 ~-l~~~~g~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~-------~~~~d~~~~~~~~~~~~vi~~~-~G 158 (404)
T 1z8o_A 89 N-MGTSDPPTHTRLRKLVSQEF-TVRRVEAMRPRVEQITAELLDEVGD-------SGVVDIVDRFAHPLPIKVICEL-LG 158 (404)
T ss_dssp S-GGGCCTTHHHHHHHHHHTTS-CHHHHHHTHHHHHHHHHHHHHTSCS-------SSEEEHHHHTTTHHHHHHHHHH-TT
T ss_pred c-cccCCCcHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHhhhh-------cCCcchHHHHhHHHHHHHHHHH-hC
Confidence 2 45567999999999999999 8888999999999999999998842 2279998766 68999999985 88
Q ss_pred C
Q 040505 228 R 228 (228)
Q Consensus 228 ~ 228 (228)
.
T Consensus 159 ~ 159 (404)
T 1z8o_A 159 V 159 (404)
T ss_dssp C
T ss_pred C
Confidence 3
No 48
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.56 E-value=1.9e-14 Score=118.04 Aligned_cols=133 Identities=15% Similarity=0.042 Sum_probs=102.2
Q ss_pred chHHHHHHHHHhCCceEEEEec-------CeeEEEEcCHHHHHHHHHhcCCCCCCCCch--h-hhhhccCCccceeecCC
Q 040505 86 TFKWIHGLMRELNTNICCIRLG-------NVHVIPVTSPEIALEFLKVHDSVFASRPLT--M-GTEYLSGGFLSIAVVPW 155 (228)
Q Consensus 86 ~~~~~~~~~~kyG~~v~~~~~~-------~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~ 155 (228)
.+..+.+++ +||| |+++..+ +.+.++++||+.+++++.+. ..|++++.. . ....++..+.+ ++..+
T Consensus 46 p~~~~~~l~-~~Gp-v~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~-l~~~d 121 (435)
T 2wm5_A 46 RDGAFATLR-REAP-ISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGS-MIVLD 121 (435)
T ss_dssp HHHHHHHHH-HHCS-EEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHG-GGGCC
T ss_pred hhHHHHHHH-hcCC-eEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccc-cccCC
Confidence 366778885 6998 9999886 66899999999999999764 456665421 1 11111111123 44557
Q ss_pred ChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcCC
Q 040505 156 GQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFSR 228 (228)
Q Consensus 156 g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~ 228 (228)
|+.|+++|+.+.++| +.+.++.+.+.+.++++++++.|.+.. ++.++|+.+++ ..+++|+|+++ ||.
T Consensus 122 g~~h~~~R~~l~~~f-s~~~l~~~~~~i~~~~~~ll~~l~~~~----~~~~vd~~~~~~~~~~~~vi~~~-~G~ 189 (435)
T 2wm5_A 122 DPRHQRLRSIVSRAF-TPKVVARIEAAVRDRAHRLVSSMIANN----PDRQADLVSELAGPLPLQIICDM-MGI 189 (435)
T ss_dssp TTHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHHHHHHHC----TTSEEEHHHHTTTHHHHHHHHHH-HTC
T ss_pred cHHHHHHHHHhHHhh-CHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCcEehHHHHHHHHHHHHHHHH-cCC
Confidence 999999999999999 888899999999999999999997642 23479999876 78999999999 984
No 49
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.55 E-value=4.2e-14 Score=115.42 Aligned_cols=130 Identities=17% Similarity=0.064 Sum_probs=99.9
Q ss_pred chHHHHHHHHHhCCceEEEEe-cCeeEEEEcCHHHHHHHHHhcCCCCCCCCch-hhhhhccC--CccceeecCCChhHHH
Q 040505 86 TFKWIHGLMRELNTNICCIRL-GNVHVIPVTSPEIALEFLKVHDSVFASRPLT-MGTEYLSG--GFLSIAVVPWGQQWKK 161 (228)
Q Consensus 86 ~~~~~~~~~~kyG~~v~~~~~-~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~g~~w~~ 161 (228)
.+..+.++ ++||| |+++++ ++.+.++++||+.+++++.++ .|.+++.. .....+.. .+.+ ++..+|+.|++
T Consensus 39 p~~~~~~l-~~yGp-v~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~-l~~~dg~~h~~ 113 (417)
T 2y5n_A 39 LAGRYGEL-QETEP-VSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGG-LLSMDPPEHSR 113 (417)
T ss_dssp CCHHHHHH-HHHCS-EEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCS-GGGCCTTHHHH
T ss_pred chHHHHHH-HhcCC-eEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCccccccc-CccCCchHHHH
Confidence 37788999 89998 999996 788999999999999999653 35444322 11111111 1223 45567999999
Q ss_pred HHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHH-HHHHHHHHHHHcCC
Q 040505 162 MRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVAR-RYCGNVIRKIMFSR 228 (228)
Q Consensus 162 ~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~-~~t~dii~~~~fG~ 228 (228)
+||++.++| +.+.++.+.+.+.++++++++.|.+. + .++|+.+++. .+++|+|+. +||.
T Consensus 114 ~R~~l~~~f-s~~~l~~~~~~i~~~~~~ll~~l~~~---~---~~vdl~~~~~~~~~~~vi~~-~~G~ 173 (417)
T 2y5n_A 114 LRRLVVKAF-TARRAESLRPRAREIAHELVDQMAAT---G---QPADLVAMFARQLPVRVICE-LLGV 173 (417)
T ss_dssp HHHHHHHHS-CHHHHHHTHHHHHHHHHHHHHHHHHH---C---SSEEHHHHTTTTHHHHHHHH-HHTC
T ss_pred HHHHHhhhc-CHHHHHHHHHHHHHHHHHHHHHHHhC---C---CCeeHHHHHHHHhHHHHHHH-HcCC
Confidence 999999999 88889999999999999999999631 1 1689987774 699999998 5883
No 50
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.55 E-value=2.1e-14 Score=116.84 Aligned_cols=132 Identities=15% Similarity=0.129 Sum_probs=101.0
Q ss_pred chHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCc--hh----hhh---hccC-CccceeecCC
Q 040505 86 TFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPL--TM----GTE---YLSG-GFLSIAVVPW 155 (228)
Q Consensus 86 ~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~--~~----~~~---~~~~-~~~~~~~~~~ 155 (228)
.+..+.++ ++||| |+++++++.+.++++||+.+++++.++. +++++. .. ... ..+. .+.+ ++..+
T Consensus 17 p~~~~~~l-~~yGp-v~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~ 91 (408)
T 1odo_A 17 HHTEHRTL-REGGP-ATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVEN-MFTAY 91 (408)
T ss_dssp HHHHHHHH-HTTCS-EEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCS-GGGCC
T ss_pred hHHHHHHH-HHhCC-eEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccc-ccccC
Confidence 47788999 99998 9999988889999999999999996542 333321 11 000 1100 1112 56677
Q ss_pred ChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHH-HHHHHHHHHHHcCC
Q 040505 156 GQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVAR-RYCGNVIRKIMFSR 228 (228)
Q Consensus 156 g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~-~~t~dii~~~~fG~ 228 (228)
|+.|+++||.++++| +.++++.+.+.+.++++++++.|.+.. ++.++|+.+++. .+++|+|+. +||.
T Consensus 92 g~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~~----~~~~~d~~~~~~~~~~~~vi~~-~~G~ 159 (408)
T 1odo_A 92 GPNHRKLRRLVAPAF-SARRVDAMRPAVEAMVTGLVDRLAELP----AGEPVDLRQELAYPLPIAVIGH-LMGV 159 (408)
T ss_dssp HHHHHHHHHTTGGGG-SHHHHHHHHHHHHHHHHHHHHHHHHSC----TTSCEEHHHHTTTHHHHHHHHH-HHTC
T ss_pred ChHHHHHHHHhhhhc-CHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCCcchHHHHhhhhHHHHHHH-HhCC
Confidence 999999999999999 888899999999999999999997542 133899999887 599999996 6883
No 51
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.55 E-value=4.2e-14 Score=115.21 Aligned_cols=133 Identities=12% Similarity=0.018 Sum_probs=100.7
Q ss_pred CCCchHHHHHHHHHhCCceEEEEecC--eeEEEEcCHHHHHHHHHhcCCCCCCCCchh-----hhhhccCCccceeecCC
Q 040505 83 NKPTFKWIHGLMRELNTNICCIRLGN--VHVIPVTSPEIALEFLKVHDSVFASRPLTM-----GTEYLSGGFLSIAVVPW 155 (228)
Q Consensus 83 ~~~~~~~~~~~~~kyG~~v~~~~~~~--~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 155 (228)
++..+..+.+++ +||| |+++..++ .+.+++++|+.+++++.+ ..|.+++... .....+..+.+ ++..+
T Consensus 26 g~~p~~~~~~l~-~~Gp-v~~~~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~-l~~~d 100 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGP-LTRVRLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGS-LAFAD 100 (411)
T ss_dssp SSCCCHHHHHHH-TTCS-EEEEECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTC-STTCC
T ss_pred cccccHHHHHHH-hcCC-eEeeecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhccccc-cccCC
Confidence 334467788887 8998 99998754 779999999999999964 3455443221 11111110123 45667
Q ss_pred ChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHH-HHHHHHHHHHHcCC
Q 040505 156 GQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVAR-RYCGNVIRKIMFSR 228 (228)
Q Consensus 156 g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~-~~t~dii~~~~fG~ 228 (228)
|+.|+++|++++++| +.++++.+.+.+.+.++++++.|.+. + .++|+.+++. .+++|+|+. +||.
T Consensus 101 g~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~---g---~~~dl~~~~~~~~~~~vi~~-l~G~ 166 (411)
T 2dkk_A 101 QPDHNRLRRAVAGAF-TVGATKRLRPRAQEILDGLVDGILAE---G---PPADLVERVLEPFPIAVVSE-VMGV 166 (411)
T ss_dssp TTHHHHHHHHHGGGS-SHHHHHHHHHHHHHHHHHHHHHHHHH---C---SCEEHHHHTTTHHHHHHHHH-HHTC
T ss_pred chHHHHHHHHhhHhh-CHHHHHHHHHHHHHHHHHHHHHHHhc---C---CCeehHHHHHHHHHHHHHHH-HhCC
Confidence 999999999999998 89999999999999999999999752 2 2789998886 799999998 4884
No 52
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.53 E-value=6.3e-14 Score=114.25 Aligned_cols=132 Identities=16% Similarity=0.082 Sum_probs=99.6
Q ss_pred chHHHHHHHHHhCCceEEEEe-cCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhh-------hhhcc--CCccceeecCC
Q 040505 86 TFKWIHGLMRELNTNICCIRL-GNVHVIPVTSPEIALEFLKVHDSVFASRPLTMG-------TEYLS--GGFLSIAVVPW 155 (228)
Q Consensus 86 ~~~~~~~~~~kyG~~v~~~~~-~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~-------~~~~~--~~~~~~~~~~~ 155 (228)
.+..+.+++ +||| |+++++ ++.+.++++||+.+++++.++ .|.+++.... ...+. .++.+.++..+
T Consensus 24 p~~~~~~l~-~~Gp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 99 (413)
T 2z36_A 24 PPAAYERLR-ERAP-INKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLMLGMD 99 (413)
T ss_dssp CCHHHHHHH-HHCS-EEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGGGCC
T ss_pred chHHHHHHH-HcCC-eeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCccccccccccccccccccccccccC
Confidence 377788887 7898 999997 788999999999999999753 4555442111 11110 01123144566
Q ss_pred ChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHH-HHHHHHHHHHHcCC
Q 040505 156 GQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVAR-RYCGNVIRKIMFSR 228 (228)
Q Consensus 156 g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~-~~t~dii~~~~fG~ 228 (228)
|+.|+++|++++++| +.++++.+.+.+.++++++++.|.+. ++.++|+.+.+. .+++++|+.+ ||.
T Consensus 100 g~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~ll~~l~~~-----~~~~~d~~~~~~~~~~~~vi~~~-~G~ 166 (413)
T 2z36_A 100 GAEHSAARRPVIGEF-TVKRLAALRPRIQDIVDHFIDDMLAT-----DQRPVDLVQALSLPVPSLVICEL-LGV 166 (413)
T ss_dssp HHHHHHHHHHHHGGG-SHHHHHHHHHHHHHHHHHHHHHHTTC-----SCSSEEHHHHTTTHHHHHHHHHH-HTC
T ss_pred chHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCccHHHHHhhhhHHHHHHHH-hCC
Confidence 999999999999998 88889999999999999999999531 123799987665 6999999985 883
No 53
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.53 E-value=1.4e-13 Score=111.83 Aligned_cols=129 Identities=11% Similarity=0.062 Sum_probs=99.3
Q ss_pred hHHHHHHHHHhCCceEEEEe-cCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh-hhhhccCCccce-eecCCC------h
Q 040505 87 FKWIHGLMRELNTNICCIRL-GNVHVIPVTSPEIALEFLKVHDSVFASRPLTM-GTEYLSGGFLSI-AVVPWG------Q 157 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~-~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~g------~ 157 (228)
+.++.++ ++||| |+++++ ++.+.++++||+.+++++.++ .|.+++... .......+ .+. ++..+| +
T Consensus 29 ~~~~~~l-~~yGp-v~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~-~~~~l~~~~g~~~~~~~ 103 (404)
T 2xbk_A 29 SPLLRAL-QDRGP-IHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYVRS-PFLDLLISDADAESGRR 103 (404)
T ss_dssp CHHHHHH-HHHCS-EEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSSCC-HHHHTTCBCSCHHHHHH
T ss_pred cHHHHHH-HhhCC-EeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccccc-ccccceeeCCCCCCCCc
Confidence 6788899 89998 999996 788999999999999999653 354443221 11111112 231 344569 9
Q ss_pred hHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcCC
Q 040505 158 QWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFSR 228 (228)
Q Consensus 158 ~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~ 228 (228)
.|+++||+++++| +.++++.+.+.+.++++++++.|.+ +|.++|+.+++ ..+++|+|+. +||.
T Consensus 104 ~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~ll~~l~~------~g~~~d~~~~~~~~~~~~vi~~-~~G~ 167 (404)
T 2xbk_A 104 QHAETRRLLTPLF-SARRVLEMQPKVEEAADTLLDAFIA------QGPPGDLHGELTVPFALTVLCE-VIGV 167 (404)
T ss_dssp HHHHHHHHHGGGG-CHHHHHHHHHHHHHHHHHHHHHHHH------TCSSEEHHHHTHHHHHHHHHHH-HHTC
T ss_pred hHHHHHHHhhhhc-CHHHHHHHHHHHHHHHHHHHHHHHh------cCCCeeHHHHHHHHHHHHHHHH-HhCC
Confidence 9999999999999 8888999999999999999999973 12379998776 5799999997 6883
No 54
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.51 E-value=1.7e-14 Score=117.03 Aligned_cols=130 Identities=11% Similarity=0.014 Sum_probs=99.3
Q ss_pred chHHHHHHHHHh--CCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhhhhccCCccceeecCCChhHHHHH
Q 040505 86 TFKWIHGLMREL--NTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMR 163 (228)
Q Consensus 86 ~~~~~~~~~~ky--G~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 163 (228)
.+.++.+|+++| || |+++..++ +.++++||+.+++++ ++...|.+++..........+ ...++..+|+.|+++|
T Consensus 21 p~~~~~~l~~~Y~~Gp-v~~~~~~~-~~~vv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~R 96 (398)
T 4fb2_A 21 PHAFFEALRDEAETTP-IGWSEAYG-GHWVVAGYKEIQAVI-QNTKAFSNKGVTFPRYETGEF-ELMMAGQDDPVHKKYR 96 (398)
T ss_dssp SHHHHHHHHHHHTTCS-EEEECGGG-CEEEECSHHHHHHHH-TCCSSEEGGGCSSSCC----C-CCTTTTCCTTHHHHHH
T ss_pred hhHHHHHHHhcCCCCC-eEEecCCC-CEEEEccHHHHHHHH-hChhhccCCcccccCCCCccc-ccCcccCCchHHHHHH
Confidence 488899999999 98 99999875 589999999999999 444566655433221111111 1235667799999999
Q ss_pred HHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcCC
Q 040505 164 KVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFSR 228 (228)
Q Consensus 164 ~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~ 228 (228)
+++.+.| +.++++.+.+.+.++++++++.|.+. ..+|+...+ ..+++++++. +||.
T Consensus 97 ~~~~~~f-~~~~l~~~~~~i~~~~~~l~~~l~~~-------~~~d~~~~~~~~~~~~vi~~-~~G~ 153 (398)
T 4fb2_A 97 QLVAKPF-SPEATDLFTEQLRQSTNDLIDARIEL-------GEGDAATWLANEIPARLTAI-LLGL 153 (398)
T ss_dssp HHHHTTT-CHHHHHTTHHHHHHHHHHHHHTTTTT-------TEEEHCCCCCTTHHHHHHHH-HTTS
T ss_pred HHHHHhh-CHHHHHHHHHHHHHHHHHHHHHHhhc-------CCccHHHHHHHHHHHHHHHH-HcCC
Confidence 9999999 88889999999999999999888432 157875555 6899999998 6873
No 55
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.51 E-value=9.2e-14 Score=114.50 Aligned_cols=131 Identities=15% Similarity=0.107 Sum_probs=100.3
Q ss_pred hHHHHHHHHHhCCceE--EEE-ecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhhh----------hccCC--cccee
Q 040505 87 FKWIHGLMRELNTNIC--CIR-LGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTE----------YLSGG--FLSIA 151 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~--~~~-~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~~----------~~~~~--~~~~~ 151 (228)
+..+.++ ++||| |+ ++. +++.+.+++++++.+++++.+. ..|++++...... ..++. ....+
T Consensus 48 ~~~~~~l-r~~gP-V~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 48 LDRFDAL-RAEAP-VAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHH-HHHCS-EEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred hHHHHHH-HhcCC-eecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 5666666 77998 99 887 6778999999999999999654 5666655322110 00000 00126
Q ss_pred ecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcCC
Q 040505 152 VVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFSR 228 (228)
Q Consensus 152 ~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~ 228 (228)
+..+|+.|+++||+++++| +.++++.+.+.+.++++++++.|.+. +.++|+.+++ ..+++++|+++ ||.
T Consensus 125 ~~~dg~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~ll~~l~~~------~~~~dl~~~~~~~~~~~vi~~l-~G~ 194 (450)
T 3tkt_A 125 VQMDAPKHPKLRRLTQDWF-MPKNLARLDGEIRKIANEAIDRMLGA------GEEGDFMALVAAPYPLHVVMQI-LGV 194 (450)
T ss_dssp GGCCTTHHHHHHHHHHTTT-SHHHHGGGHHHHHHHHHHHHHHHHHT------CSEEEHHHHTTTHHHHHHHHHH-TTC
T ss_pred ccCCCHHHHHHHHHhhhhh-CHHHHHHHHHHHHHHHHHHHHHHHhc------CCCEeeHHHHHHHHHHHHHHHH-cCC
Confidence 6677999999999999999 89999999999999999999999752 2389998888 69999999986 873
No 56
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.49 E-value=2.4e-13 Score=111.28 Aligned_cols=126 Identities=10% Similarity=-0.021 Sum_probs=97.9
Q ss_pred hHHHHHHHHHhCCceEEEEec--CeeEEEEcCHHHHHHHHHhcCCCCCCCCch--------h-h-------hhhccCCcc
Q 040505 87 FKWIHGLMRELNTNICCIRLG--NVHVIPVTSPEIALEFLKVHDSVFASRPLT--------M-G-------TEYLSGGFL 148 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~--~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~--------~-~-------~~~~~~~~~ 148 (228)
+.++.+++ +||| |+++++| +.+.++++||+.+++++.++ .|++++.. . . ...+++ .
T Consensus 23 ~~~~~~l~-~~Gp-v~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 96 (425)
T 2z3t_A 23 YPVYRRYR-EAAP-VHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE--N 96 (425)
T ss_dssp HHHHHHHH-HHCS-EEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT--T
T ss_pred HHHHHHHH-hcCC-eEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc--c
Confidence 67788875 5998 9999987 67899999999999999754 56655421 0 0 011221 2
Q ss_pred ceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcC
Q 040505 149 SIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFS 227 (228)
Q Consensus 149 ~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG 227 (228)
+ ++..+|+.|+++||+++++| +.++++.+.+.+.++++++++.|.+. | ++|+.+++ ..+++|+|+.+ ||
T Consensus 97 ~-l~~~dg~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~ll~~l~~~------g-~~dl~~~~~~~~~~~vi~~~-~G 166 (425)
T 2z3t_A 97 W-LVFLDPPHHTELRSLLTTEF-SPSIVTGLRPRIAELASALLDRLRAQ------R-RPDLVEGFAAPLPILVISAL-LG 166 (425)
T ss_dssp C-GGGCCHHHHHHHHHHHHGGG-SHHHHHHHHHHHHHHHHHHHHHHTTS------S-SCBHHHHTTTHHHHHHHHHH-HT
T ss_pred c-cccCCchHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHHHHhc------C-CccHHHHHHHHHHHHHHHHH-hC
Confidence 3 44556999999999999999 88889999999999999999999531 2 78998755 78999999998 88
Q ss_pred C
Q 040505 228 R 228 (228)
Q Consensus 228 ~ 228 (228)
.
T Consensus 167 ~ 167 (425)
T 2z3t_A 167 I 167 (425)
T ss_dssp C
T ss_pred C
Confidence 4
No 57
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.49 E-value=1e-13 Score=112.93 Aligned_cols=130 Identities=16% Similarity=0.136 Sum_probs=98.8
Q ss_pred chHHHHHHHHHhCCceEEEEe-cCeeEEEEcCHHHHHHHHHhcCCCCCCCC-chhhh---h------hcc--CCccceee
Q 040505 86 TFKWIHGLMRELNTNICCIRL-GNVHVIPVTSPEIALEFLKVHDSVFASRP-LTMGT---E------YLS--GGFLSIAV 152 (228)
Q Consensus 86 ~~~~~~~~~~kyG~~v~~~~~-~~~~~v~i~~p~~~~~vl~~~~~~~~~~~-~~~~~---~------~~~--~~~~~~~~ 152 (228)
.+..+.++ ++||| |++++. ++.+.++++||+.+++++.++. +.+++ ..... . .++ ..+.+ ++
T Consensus 19 p~~~~~~l-~~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ 93 (411)
T 1gwi_A 19 LDGESARL-RAAGP-LAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRS-ML 93 (411)
T ss_dssp HHHHHHHH-HHTCS-EEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSS-GG
T ss_pred hHHHHHHH-HHhCC-eeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhccccc-cc
Confidence 37778888 99998 999997 8899999999999999996542 33332 11100 0 000 10123 56
Q ss_pred cCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHH-HHHHHHHHHHHcCC
Q 040505 153 VPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVAR-RYCGNVIRKIMFSR 228 (228)
Q Consensus 153 ~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~-~~t~dii~~~~fG~ 228 (228)
..+|+.|+++|+.++++| +.++++.+.+.+.++++++++.|.+ . +.++|+.+++. .+++|+|+. +||.
T Consensus 94 ~~~g~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~---~---~~~~d~~~~~~~~~~~~vi~~-~~G~ 162 (411)
T 1gwi_A 94 TVDGAEHRRLRTLVAQAL-TVRRVEHMRGRITELTDRLLDELPA---D---GGVVDLKAAFAYPLPMYVVAD-LMGI 162 (411)
T ss_dssp GCCHHHHHHHHHHHTTTS-CHHHHHTTHHHHHHHHHHHHHTSCC---S---CCCEEHHHHTTTHHHHHHHHH-HHTC
T ss_pred cCCcHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHH---c---CCCcchHHHHhhHHHHHHHHH-HhCC
Confidence 677999999999999999 8888999999999999999998852 1 23899998886 599999996 6883
No 58
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.49 E-value=8.1e-14 Score=113.05 Aligned_cols=124 Identities=10% Similarity=-0.024 Sum_probs=95.6
Q ss_pred chHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhhhhccCCccceeecCCChhHHHHHHH
Q 040505 86 TFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKV 165 (228)
Q Consensus 86 ~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~ 165 (228)
.+.++.++++ ||| |+++. . +.++++||+.+++++.++ ..|++++... ...+.. .+ ++..+|+.|+++|+.
T Consensus 20 p~~~~~~l~~-~Gp-v~~~~--~-~~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~~~--~~-l~~~~g~~h~~~R~~ 89 (398)
T 2xkr_A 20 ARAAYRWMRA-NQP-VFRDR--N-GLAAASTYQAVIDAERQP-ELFSNAGGIR-PDQPAL--PM-MIDMDDPAHLLRRKL 89 (398)
T ss_dssp HHHHHHHHHH-HCS-EEECT--T-CCEEECSHHHHHHHHTCT-TTEESTTCSS-TTSCCC--SS-GGGCCTTHHHHHHHH
T ss_pred hhHHHHHHHh-cCC-eeecC--C-CeEEEecHHHHHHHHhCc-ccccCccccC-Cccccc--cc-ccccCchHHHHHHHH
Confidence 3777888887 998 98664 2 789999999999999654 3566554322 111222 23 555679999999999
Q ss_pred HHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHH-HHHHHHHHHHHHHcCC
Q 040505 166 VASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLV-ARRYCGNVIRKIMFSR 228 (228)
Q Consensus 166 ~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~-~~~~t~dii~~~~fG~ 228 (228)
++++| +.+.++.+.+.+.++++++++.|.+. + ++|+... ...+++|+|+++ ||.
T Consensus 90 ~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~----~---~~d~~~~~~~~~~~~vi~~~-fG~ 144 (398)
T 2xkr_A 90 VNAGF-TRKRVKDKEASIAALCDTLIDAVCER----G---ECDFVRDLAAPLPMAVIGDM-LGV 144 (398)
T ss_dssp HGGGS-CHHHHHTTHHHHHHHHHHHHHTTTTT----S---EEEHHHHTTTHHHHHHHHHH-HTC
T ss_pred hhhhh-CHHHHHHHHHHHHHHHHHHHHhhhhc----C---CccHHHHHHHHHHHHHHHHH-hCC
Confidence 99999 88889999999999999999988431 1 7899855 568999999998 984
No 59
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.47 E-value=2e-13 Score=111.31 Aligned_cols=128 Identities=9% Similarity=0.008 Sum_probs=97.7
Q ss_pred chHHHHHHHHHhCCceE-----EEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh--hh-hhc-c-CCccceeecCC
Q 040505 86 TFKWIHGLMRELNTNIC-----CIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTM--GT-EYL-S-GGFLSIAVVPW 155 (228)
Q Consensus 86 ~~~~~~~~~~kyG~~v~-----~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~--~~-~~~-~-~~~~~~~~~~~ 155 (228)
.+.++.++ ++||| |+ ++.. .+.++++||+.+++++.++ ..|++++... .. ..+ + ..+.+ ++..+
T Consensus 27 p~~~~~~l-~~~Gp-v~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~-l~~~~ 100 (414)
T 2uuq_A 27 PWPMYRAL-RDHDP-VHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPP-MVMQD 100 (414)
T ss_dssp CHHHHHHH-HHHCS-EEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCC-GGGCC
T ss_pred chHHHHHH-HhcCC-EEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccc-cccCC
Confidence 36777887 57998 98 7765 5789999999999999765 5566654321 11 122 2 11223 44557
Q ss_pred ChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHH-HHHHHHHHHHHHHHHcCC
Q 040505 156 GQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVR-LVARRYCGNVIRKIMFSR 228 (228)
Q Consensus 156 g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~-~~~~~~t~dii~~~~fG~ 228 (228)
|+.|+++|++++++| +.+.++.+.+.+.++++++++.|.+. + ++|+. +++..+++|+|+. +||.
T Consensus 101 g~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~ll~~l~~~----~---~vdl~~~~~~~~~~~vi~~-~~G~ 165 (414)
T 2uuq_A 101 PPVHTEFRKLVSRGF-TPRQVETVEPTVRKFVVERLEKLRAN----G---GGDIVTELFKPLPSMVVAH-YLGV 165 (414)
T ss_dssp TTHHHHHHHHHHTTS-SHHHHHHHHHHHHHHHHHHHHHHHHT----T---EEEHHHHTTTHHHHHHHHH-HTTC
T ss_pred chhHHHHHHHhhhhc-CHHHHHHHHHHHHHHHHHHHHHHHhc----C---CccHHHHHHHHhHHHHHHH-HhCC
Confidence 999999999999999 88889999999999999999999652 2 68997 5567999999998 5884
No 60
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.46 E-value=1.1e-13 Score=113.10 Aligned_cols=127 Identities=17% Similarity=0.074 Sum_probs=97.8
Q ss_pred chHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCc-----hh-h--hhhccCC-ccceeecCCC
Q 040505 86 TFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPL-----TM-G--TEYLSGG-FLSIAVVPWG 156 (228)
Q Consensus 86 ~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~-----~~-~--~~~~~~~-~~~~~~~~~g 156 (228)
.+..+.++ ++||| |++ . ++.+.++++||+.+++++.+++ |.+++. .. . ...++.. +.+ ++..+|
T Consensus 28 p~~~~~~l-~~~Gp-v~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g 100 (419)
T 1q5d_A 28 PFPAIERL-REATP-IFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYG-LFGLPP 100 (419)
T ss_dssp CHHHHHHH-HHHCS-EEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHS-TTTSCH
T ss_pred hHHHHHHH-HhhCC-ccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccc-cccCCc
Confidence 37778888 78998 998 5 6778999999999999997653 766651 11 1 1122100 122 455679
Q ss_pred hhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcCC
Q 040505 157 QQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFSR 228 (228)
Q Consensus 157 ~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~ 228 (228)
+.|+++|+++.++| +.+.++.+.+.+.++++++++.|.+. + ++|+.+.+ ..+++|+|+.+ ||.
T Consensus 101 ~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~ll~~l~~~------~-~~d~~~~~~~~~~~~vi~~~-fG~ 164 (419)
T 1q5d_A 101 EDHARVRKLVNPSF-TSRAIDLLRAEIQRTVDQLLDARSGQ------E-EFDVVRDYAEGIPMRAISAL-LKV 164 (419)
T ss_dssp HHHHHHHHHHGGGG-SHHHHGGGHHHHHHHHHHHHHHHTTS------S-CEETTTTTGGGSHHHHHHHH-TTC
T ss_pred hHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHhc------C-CCCHHHHHHHHHHHHHHHHH-hCC
Confidence 99999999999999 88889999999999999999998531 1 78987654 89999999998 884
No 61
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.43 E-value=5.5e-13 Score=108.08 Aligned_cols=125 Identities=13% Similarity=-0.013 Sum_probs=93.1
Q ss_pred hHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhh------hhccCC-ccceeecCCChhH
Q 040505 87 FKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGT------EYLSGG-FLSIAVVPWGQQW 159 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~g~~w 159 (228)
+.++.++ ++||| |++ . +.+.++++||+.+++++.+ ..|.+++..... ..+..- +.+ ++..+|+.|
T Consensus 16 ~~~~~~l-~~yGp-v~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~~h 87 (397)
T 3buj_A 16 YPSYHWL-LRHDP-VHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDI-ILFQDEPDH 87 (397)
T ss_dssp HHHHHHH-HHHCS-EEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTC-GGGCCTTHH
T ss_pred hHHHHHH-HhcCC-eee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccc-cccCCchhH
Confidence 6666655 68998 998 5 5789999999999999964 345543321100 011100 122 455679999
Q ss_pred HHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHH-HHHHHHHHHHHHHcCC
Q 040505 160 KKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLV-ARRYCGNVIRKIMFSR 228 (228)
Q Consensus 160 ~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~-~~~~t~dii~~~~fG~ 228 (228)
+++|++++++| +.+.++.+.+.+.++++++++.|.+ ++ ++|+.+. ...+++|+|+.+ ||.
T Consensus 88 ~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~----~~---~~dl~~~~~~~~~~~vi~~~-~G~ 148 (397)
T 3buj_A 88 GRLRGVVGPAF-SPSALRRLEPVIAGTVDDLLRPALA----RG---AMDVVDELAYPLALRAVLGL-LGL 148 (397)
T ss_dssp HHHHHHHGGGS-STTTTGGGHHHHHHHHHHHHHHHHT----TT---EEEHHHHTHHHHHHHHHHHH-HTC
T ss_pred HHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHhh----cC---CeehHHHHHHHhHHHHHHHH-hCC
Confidence 99999999998 8888999999999999999999963 12 7898755 478999999998 884
No 62
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=99.42 E-value=5.9e-13 Score=106.86 Aligned_cols=124 Identities=17% Similarity=0.137 Sum_probs=94.3
Q ss_pred hHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCc-----hh-h-hhh--ccC-CccceeecCCC
Q 040505 87 FKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPL-----TM-G-TEY--LSG-GFLSIAVVPWG 156 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~-----~~-~-~~~--~~~-~~~~~~~~~~g 156 (228)
+..+.++ ++||| |+++ + +.+++++|+.+++++.+. ..|++++. .. . ... ++. .+.+ ++..+|
T Consensus 2 ~~~~~~l-r~~Gp-v~~~--g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~g 73 (368)
T 1io7_A 2 YDWFSEM-RKKDP-VYYD--G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYT-MLTSDP 73 (368)
T ss_dssp HHHHHHH-HHHCS-EEEC--S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSS-GGGCCT
T ss_pred CHHHHHH-HhcCC-eEeE--C--CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccc-cccCCC
Confidence 4556666 58998 9987 3 588999999999999764 45766653 11 1 011 221 1123 455679
Q ss_pred hhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcCC
Q 040505 157 QQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFSR 228 (228)
Q Consensus 157 ~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~ 228 (228)
+.|+++||.++++| +.+.++.+.+.+.++++++++.| + . + ++|+.+++ ..+++|+|+.+ ||.
T Consensus 74 ~~h~~~R~~~~~~f-~~~~~~~~~~~i~~~~~~l~~~l-~---~-g---~~d~~~~~~~~~~~~vi~~~-~G~ 136 (368)
T 1io7_A 74 PLHDELRSMSADIF-SPQKLQTLETFIRETTRSLLDSI-D---P-R---EDDIVKKLAVPLPIIVISKI-LGL 136 (368)
T ss_dssp THHHHHHGGGTTTT-CHHHHHHHHHHHHHHHHHHHHTC-C---T-T---SEEHHHHTTTHHHHHHHHHH-HTC
T ss_pred hHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHHHHHHh-h---c-C---CccHHHHHHHHHHHHHHHHH-hCC
Confidence 99999999999999 88889999999999999999988 3 1 2 68999877 78999999998 984
No 63
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=99.41 E-value=7.5e-13 Score=107.35 Aligned_cols=125 Identities=8% Similarity=0.033 Sum_probs=90.4
Q ss_pred HHHHHHhCCceEEEEec-Ce---eEEEEcCHHHHHHHHHhcCCCCCCCCc------h---hhhhhccCCccceeecCCCh
Q 040505 91 HGLMRELNTNICCIRLG-NV---HVIPVTSPEIALEFLKVHDSVFASRPL------T---MGTEYLSGGFLSIAVVPWGQ 157 (228)
Q Consensus 91 ~~~~~kyG~~v~~~~~~-~~---~~v~i~~p~~~~~vl~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~g~ 157 (228)
.+|+++ || |+++.++ +. +.++++||+.+++++.++ ..|.+++. . ........+ .+ ++..+|+
T Consensus 20 ~~l~~~-Gp-v~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~-l~~~~g~ 94 (398)
T 1lfk_A 20 DELLAA-GA-LTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELV-GN-LMDYDPP 94 (398)
T ss_dssp HHHHTS-CS-EEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCT-TC-GGGCCTT
T ss_pred HHHHhc-CC-ccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccccc-cC-ccccCCH
Confidence 446666 98 9999875 45 899999999999999433 23544433 1 111111111 23 4456799
Q ss_pred hHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHH-HHHHHHHHHHcCC
Q 040505 158 QWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARR-YCGNVIRKIMFSR 228 (228)
Q Consensus 158 ~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~-~t~dii~~~~fG~ 228 (228)
.|+++||+++++| +.++++.+.+.+.++++++++.|.+. + .++|+.+++.. +++++++. +||.
T Consensus 95 ~~~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~---~---~~~d~~~~~~~~~~~~vi~~-~~G~ 158 (398)
T 1lfk_A 95 EHTRLRRKLTPGF-TLRKMQRMAPYIEQIVNDRLDEMERA---G---SPADLIAFVADKVPGAVLCE-LVGV 158 (398)
T ss_dssp HHHHHHHHHGGGG-CHHHHHHHHHHHHHHHHHHHHHHHHH---C---SSEEHHHHTTTTHHHHHHHH-HHTC
T ss_pred HHHHHHHHHHhhh-CHHHHHHHHHHHHHHHHHHHHHHHhc---C---CCccHHHHHHHHHHHHHHHH-HcCC
Confidence 9999999999999 88889999999999999999999642 2 27999999987 99999998 5883
No 64
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.41 E-value=2.2e-13 Score=111.09 Aligned_cols=131 Identities=17% Similarity=0.094 Sum_probs=97.8
Q ss_pred CchHHHHHHHHHhCCceEEEEecC--eeEEEEcCHHHHHHHHHhcCCCCCCCCchhhhhhccC--Cc-cceeecCCChhH
Q 040505 85 PTFKWIHGLMRELNTNICCIRLGN--VHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLSG--GF-LSIAVVPWGQQW 159 (228)
Q Consensus 85 ~~~~~~~~~~~kyG~~v~~~~~~~--~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~g~~w 159 (228)
+.+..+.++++ ||| |+++...+ .+.+++++|+.+++++.+. ..|++++.......... .. ...++..+|+.|
T Consensus 38 dp~~~~~~lr~-~gp-V~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h 114 (415)
T 3mgx_A 38 ERHARWRELAA-EDA-MVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQH 114 (415)
T ss_dssp THHHHHHHHHH-HTC-CEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHH
T ss_pred ChhHHHHHHHh-cCC-EeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcHHH
Confidence 34777777776 998 99987445 7899999999999999443 45665543222111100 00 123566779999
Q ss_pred HHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcC
Q 040505 160 KKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFS 227 (228)
Q Consensus 160 ~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG 227 (228)
+++||+++++| +.+.++.+.+.+.++++++++.|.+. .++|+.+++ ..+++++|+.+ ||
T Consensus 115 ~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~ll~~l~~~-------~~~dl~~~~~~~~~~~vi~~l-~G 174 (415)
T 3mgx_A 115 RKLRKLVGPLL-SRAAARKLAERVRIEVGDVLGRVLDG-------EVCDAATAIGPRIPAAVVCEI-LG 174 (415)
T ss_dssp HHHHHHHGGGS-SHHHHHHSHHHHHHHHHHHTTTSSSS-------SCEESTTTTTTHHHHHHHHHH-HT
T ss_pred HHHHHHhHhhh-CHHHHHHHHHHHHHHHHHHHHHHHhc-------CCcchHHHHHHHHHHHHHHHH-cC
Confidence 99999999999 89999999999999999999887431 168998888 67999999984 77
No 65
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=99.41 E-value=3.5e-13 Score=109.26 Aligned_cols=126 Identities=13% Similarity=0.076 Sum_probs=95.1
Q ss_pred chHHHHHHHHHhCCceEEEEe-cCeeEEEEcCHHHHHHHHHhcCCCCC-C-CCch--hhhh--hccC-CccceeecCCCh
Q 040505 86 TFKWIHGLMRELNTNICCIRL-GNVHVIPVTSPEIALEFLKVHDSVFA-S-RPLT--MGTE--YLSG-GFLSIAVVPWGQ 157 (228)
Q Consensus 86 ~~~~~~~~~~kyG~~v~~~~~-~~~~~v~i~~p~~~~~vl~~~~~~~~-~-~~~~--~~~~--~~~~-~~~~~~~~~~g~ 157 (228)
.+..+.+| ++||| |+++.+ ++.+.++++||+.+++++.++ .|. + ++.. .... .+.. .+.++++.
T Consensus 18 p~~~~~~l-~~yGp-v~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---- 89 (396)
T 1n40_A 18 IPDAVAEL-RTREP-IRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI---- 89 (396)
T ss_dssp CCHHHHHH-HHHCS-EEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH----
T ss_pred ccHHHHHH-HHhCC-eeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH----
Confidence 37788999 99998 999997 788999999999999999654 344 3 3211 1110 0111 11233333
Q ss_pred hHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHH-HHHHHHHHHHHcCC
Q 040505 158 QWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVAR-RYCGNVIRKIMFSR 228 (228)
Q Consensus 158 ~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~-~~t~dii~~~~fG~ 228 (228)
.|+++||.+++.| +.+ ++.+.+.+.++++++++.|.+. ++ ++|+.+++. .+++|+|+. +||.
T Consensus 90 ~h~~~R~~~~~~f-s~~-~~~~~~~i~~~~~~l~~~l~~~---~~---~~d~~~~~~~~~~~~vi~~-~~G~ 152 (396)
T 1n40_A 90 ADAGLRKAVMKAI-TPK-APGLEQFLRDTANSLLDNLITE---GA---PADLRNDFADPLATALHCK-VLGI 152 (396)
T ss_dssp HHTTCHHHHHHHT-SSC-STTHHHHHHHHHHHHHHHHHHH---CS---CEETTTTTHHHHHHHHHHH-HHTC
T ss_pred HHHHHHHHHHHhh-ChH-HHHhHHHHHHHHHHHHHHHHhc---CC---CccHHHHHHHHhHHHHHHH-HhCC
Confidence 8999999999999 888 9999999999999999999752 22 789986664 899999998 7884
No 66
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=99.38 E-value=6e-13 Score=105.86 Aligned_cols=110 Identities=16% Similarity=0.110 Sum_probs=86.2
Q ss_pred HHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCc-hhhhhhccCCccceeecCCChhHHHHHHHHHHhhhch
Q 040505 95 RELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPL-TMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHS 173 (228)
Q Consensus 95 ~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~ 173 (228)
++||| |+++ + .++++||+.+++++.++ ..|.+++. ... .. ++.+ ++..+|+.|+++||.++++| +.
T Consensus 2 r~~gp-v~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~-~~---~~~~-l~~~~g~~~~~~R~~~~~~f-s~ 68 (343)
T 2rfb_A 2 RLNDP-VHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYS-NA---GGIS-FITMDNPEHKEFRDISAPYF-LP 68 (343)
T ss_dssp -CCCC-EEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC-------CCG-GGGCCHHHHHHHHHHHHHHH-SH
T ss_pred CCcCC-eeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCC-Cc---cccc-cccCCchHHHHHHHHhhhhc-CH
Confidence 58998 9876 3 88999999999999765 35666542 111 11 1233 45567999999999999999 88
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcCC
Q 040505 174 VRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFSR 228 (228)
Q Consensus 174 ~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~ 228 (228)
++++.+.+.+.++++++++.|. ++|+.+++ ..+++|+|+++ ||.
T Consensus 69 ~~l~~~~~~i~~~~~~l~~~l~----------~~d~~~~~~~~~~~~vi~~~-~G~ 113 (343)
T 2rfb_A 69 SKINDYKDFIEETSNDLIKNID----------NKDIISEYAVRLPVNIISKI-LGI 113 (343)
T ss_dssp HHHGGGHHHHHHHHHHHHTTCT----------TSCHHHHTTTHHHHHHHHHH-HTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcc----------ccCHHHHHhhhhhHHHHHHH-cCC
Confidence 8899999999999999998873 57888866 89999999998 884
No 67
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.37 E-value=4.4e-13 Score=110.20 Aligned_cols=125 Identities=16% Similarity=0.202 Sum_probs=84.5
Q ss_pred hHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhhh-hccCCccceeecCCChhHHHHHHH
Q 040505 87 FKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTE-YLSGGFLSIAVVPWGQQWKKMRKV 165 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~w~~~R~~ 165 (228)
+.++.++ ++||| |+++..++ .+++++|+.+++++.+.. .|.+++...... .++.+ .++..+|+.|+++||+
T Consensus 56 ~~~~~~l-r~~gp-v~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~---~l~~~dg~~h~~~Rr~ 127 (441)
T 3nc3_A 56 YAYFSQL-REEDP-VHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAEPVMRGP---VLAQMHGKEHSAKRRI 127 (441)
T ss_dssp GGTHHHH-HHHCS-EEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCCCSCC----------------CCHHH
T ss_pred HHHHHHH-HhcCC-EEEeCCCC--EEEEcCHHHHHHHhcCcc-cccccccccccccccCCC---ccccCCcHHHHHHHHH
Confidence 5556555 78999 99887655 799999999999997653 366555332222 22222 2566679999999999
Q ss_pred HHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHH-HHHHHHHHHHHHHHcCC
Q 040505 166 VASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRL-VARRYCGNVIRKIMFSR 228 (228)
Q Consensus 166 ~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~-~~~~~t~dii~~~~fG~ 228 (228)
+.++| +.+.++.+.+.+.++++++++.|.+ +.++|+.. ....+++++|+. +||.
T Consensus 128 ~~~~f-s~~~l~~~~~~i~~~~~~ll~~l~~-------~~~~dl~~~~~~~~~~~vi~~-l~G~ 182 (441)
T 3nc3_A 128 VVRSF-IGDALDHLSPLIKQNAENLLAPYLE-------RGKSDLVNDFGKTFAVCVTMD-MLGL 182 (441)
T ss_dssp HHHHH-HHTHHHHHHHHHHHHHHHHHTTTTT-------TTEEECCCCCHHHHHHHHHHH-HTTC
T ss_pred HHhhc-CHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCcHHHHHHHHHHHHHHHH-HcCC
Confidence 99999 8888999999999999999988842 12678644 445699999998 4773
No 68
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.37 E-value=3.4e-12 Score=104.10 Aligned_cols=126 Identities=12% Similarity=0.046 Sum_probs=93.0
Q ss_pred chHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhh-hhcc-------CCccceeecCCCh
Q 040505 86 TFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGT-EYLS-------GGFLSIAVVPWGQ 157 (228)
Q Consensus 86 ~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~g~ 157 (228)
.+.++.++ ++||| |+++..+ .+++++|+.+++++.+. ..+++++..... ...+ ..+.+ ++..+|+
T Consensus 31 p~~~~~~l-r~~gp-v~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~dg~ 103 (418)
T 3r9b_A 31 PYPIYDRI-RRGGP-LALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPAS-FLFLDPP 103 (418)
T ss_dssp CHHHHHHH-HHHCC-EEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCC-GGGCCTT
T ss_pred chHHHHHH-HhcCC-EEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccc-hhhcCCc
Confidence 47777777 68898 9987664 89999999999999653 333444422211 1111 01122 5566799
Q ss_pred hHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcCC
Q 040505 158 QWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFSR 228 (228)
Q Consensus 158 ~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~ 228 (228)
.|+++||++++.| +.++++.+.+.+.++++++++ +.+ +.++|+.+.+ ..+++++|++ +||.
T Consensus 104 ~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~ll~-l~~-------~~~~d~~~~~~~~~~~~vi~~-~~G~ 165 (418)
T 3r9b_A 104 DHTRLRGLVSKAF-APRVIKRLEPEITALVDQLLD-AVD-------GPEFNLIDNLAYPLPVAVICR-LLGV 165 (418)
T ss_dssp HHHHHHHHHHGGG-SHHHHGGGHHHHHHHHHHHHH-TCC-------SSEEEHHHHTTTHHHHHHHHH-HHTC
T ss_pred hHHHHHHHhhhhh-CHHHHHHHHHHHHHHHHHHHh-hhc-------cCCeehHHHHhCcCCHHHHHH-HcCC
Confidence 9999999999999 899999999999999999998 731 1278976655 6899999999 7883
No 69
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.37 E-value=2.3e-12 Score=105.20 Aligned_cols=129 Identities=10% Similarity=-0.020 Sum_probs=94.9
Q ss_pred chHHHHHHHHHhC-CceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhhhhccCCccceeecCCChhHHHHHH
Q 040505 86 TFKWIHGLMRELN-TNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRK 164 (228)
Q Consensus 86 ~~~~~~~~~~kyG-~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~ 164 (228)
.+.++.++++++| | |+++..++ +.++++||+.+++++. +...|.+++...........+ ..++..+|+.|+++|+
T Consensus 40 p~~~~~~lr~~~G~p-v~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~-~~~~~~dg~~h~~~R~ 115 (421)
T 3lxh_A 40 FHEAWKRVQQPDTPP-LVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVPREAGEAYD-MVPTKLDPPEHTPYRK 115 (421)
T ss_dssp HHHHHHHHCCTTCCS-EEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSSHHHHHHCC-CTTTTCCTTTHHHHHH
T ss_pred hhHHHHHHHhcCCCC-eEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCCcccccccc-cCCccCCcHHHHHHHH
Confidence 4777888877655 7 99988766 5889999999999994 445666655321111111111 1256677999999999
Q ss_pred HHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcC
Q 040505 165 VVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFS 227 (228)
Q Consensus 165 ~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG 227 (228)
++++.| +.+.++.+.+.+.++++++++.|.+. ..+|+...+ ..++.++++.+ ||
T Consensus 116 ~~~~~f-s~~~l~~~~~~i~~~~~~l~~~l~~~-------~~~d~~~~~~~~~~~~v~~~~-~G 170 (421)
T 3lxh_A 116 AIDKGL-NLAEIRKLEDQIRTIAVEIIEGFADR-------GHCEFGSEFSTVFPVRVFLAL-AG 170 (421)
T ss_dssp HHHHHH-SHHHHHTTHHHHHHHHHHHHHTTTTT-------SEEEHHHHTTTTHHHHHHHHH-HT
T ss_pred HHhhhc-CHHHHHHHHHHHHHHHHHHHHHHhhc-------CCeehHHHHHHHHHHHHHHHH-cC
Confidence 999999 89989999999999999999988421 167876555 66888888864 76
No 70
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.35 E-value=1.8e-12 Score=105.04 Aligned_cols=129 Identities=12% Similarity=0.002 Sum_probs=96.6
Q ss_pred CchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhhhhccCCccceeecCCChhHHHHHH
Q 040505 85 PTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRK 164 (228)
Q Consensus 85 ~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~ 164 (228)
+.+.++.+++++ || |+++..++ +.++++||+.+++++.+. ..|.+++........+.. ...++..+|+.|+++||
T Consensus 25 ~p~~~~~~l~~~-Gp-v~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~-~~~~~~~~g~~h~~~R~ 99 (396)
T 3oft_A 25 DYFAAWKTLLDG-PG-LVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVM-QFIPLQQDGAEHKAFRT 99 (396)
T ss_dssp CHHHHHHGGGGS-CS-EEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHH-CCTTTTCCHHHHHHHHH
T ss_pred ChHHHHHHHHhc-CC-eeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCcccccc-ccCccccCCcHHHHHHH
Confidence 347889999998 98 99998874 588899999999999544 466655522111111111 11256677999999999
Q ss_pred HHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcC
Q 040505 165 VVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFS 227 (228)
Q Consensus 165 ~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG 227 (228)
.++++| +.+.++.+.+.+.++++++++.|.+. + .+|+...+ ..++.++++. +||
T Consensus 100 ~~~~~f-~~~~l~~~~~~i~~~~~~l~~~l~~~----~---~~d~~~~~~~~~~~~v~~~-~~G 154 (396)
T 3oft_A 100 PVMKGL-ASRFVVALEPKVQAVARKLMESLRPR----G---SCDFVSDFAEILPLNIFLT-LID 154 (396)
T ss_dssp HHHHHT-CHHHHHHHHHHHHHHHHHHHHHHGGG----S---EEEHHHHTTTTHHHHHHHH-HTT
T ss_pred Hhhhhh-CHHHHHHHHHHHHHHHHHHHHHhhhc----C---CccHHHHHHHHHHHHHHHH-HcC
Confidence 999999 89889999999999999999998532 1 67876665 6688888876 466
No 71
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=99.35 E-value=1e-11 Score=101.64 Aligned_cols=130 Identities=12% Similarity=0.038 Sum_probs=95.7
Q ss_pred CchHHHHHHHHHhCCceEEEEe-cCeeEEEEcCHHHHHHHHHhcCCCCCCCCc---hhhhh-----h-ccCCccceeecC
Q 040505 85 PTFKWIHGLMRELNTNICCIRL-GNVHVIPVTSPEIALEFLKVHDSVFASRPL---TMGTE-----Y-LSGGFLSIAVVP 154 (228)
Q Consensus 85 ~~~~~~~~~~~kyG~~v~~~~~-~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~---~~~~~-----~-~~~~~~~~~~~~ 154 (228)
+.+.++.++.++ || |+++.. ++.+.+++++++.+++++.+. ..|++++. ..... . .+... ..++..
T Consensus 39 ~p~~~~~~lr~~-gp-v~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~ 114 (426)
T 3rwl_A 39 SVGEYFKRLRKD-DP-VHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDL-PNFIAM 114 (426)
T ss_dssp CHHHHHHHHHHH-CS-EEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCC-CCGGGC
T ss_pred CccHHHHHHHhc-CC-eeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCccccccccccccccc-Cccccc
Confidence 346777888765 98 999876 456799999999999999654 34544331 11111 0 01111 225667
Q ss_pred CChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcC
Q 040505 155 WGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFS 227 (228)
Q Consensus 155 ~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG 227 (228)
+|+.|+++|+++++.| +.+.++.+.+.+.+.++++++.|. .+.++|+...+ ..+++++++. +||
T Consensus 115 dg~~h~~~R~~~~~~f-s~~~l~~~~~~i~~~~~~ll~~l~-------~~~~~dl~~~~~~~~~~~vi~~-l~G 179 (426)
T 3rwl_A 115 DRPRHDEQRKAVSPIV-APANLAALEGTIRERVSKTLDGLP-------VGEEFDWVDRVSIEITTQMLAT-LFD 179 (426)
T ss_dssp CTTHHHHHHHHHGGGG-CHHHHHHHHHHHHHHHHHHHHTSC-------SSSCEEHHHHTHHHHHHHHHHH-HHT
T ss_pred CchHHHHHHHHhhhhh-CHHHHHHHHHHHHHHHHHHHHHhh-------cCCCcchHHHHHHHHHHHHHHH-HcC
Confidence 7999999999999999 899999999999999999998882 22378977777 6899999986 687
No 72
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=99.34 E-value=2.4e-12 Score=103.26 Aligned_cols=121 Identities=17% Similarity=0.081 Sum_probs=90.2
Q ss_pred hHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCc-hh--h-----h-hhccCC-ccceeecCCC
Q 040505 87 FKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPL-TM--G-----T-EYLSGG-FLSIAVVPWG 156 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~-~~--~-----~-~~~~~~-~~~~~~~~~g 156 (228)
+..+.++ ++||| |+++. | .+++++|+.+++++.+. ..|.+++. .. . . ...+.. ..+ ++..+|
T Consensus 2 ~~~~~~l-r~~gp-v~~~~-g---~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~dg 73 (367)
T 3b4x_A 2 YDWFKQM-RKESP-VYYDG-K---VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYT-MLTSDP 73 (367)
T ss_dssp HHHHHHH-HHHCS-EEECS-S---SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSS-GGGCCT
T ss_pred CHHHHHH-HHcCC-ceeeC-C---EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccc-cccCCc
Confidence 4456666 57999 99887 3 78999999999999764 35665532 11 1 1 222310 123 445579
Q ss_pred hhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcCC
Q 040505 157 QQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFSR 228 (228)
Q Consensus 157 ~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~ 228 (228)
+.|+++||+++++| +.++++. +.++++++++++.|. | ++|+.+.+ ..+++|+|+. +||.
T Consensus 74 ~~h~~~R~~~~~~f-s~~~l~~--~~i~~~~~~l~~~l~--------g-~~d~~~~~~~~~~~~vi~~-~~G~ 133 (367)
T 3b4x_A 74 PLHDELRNLTADAF-NPSNLPV--DFVREVTVKLLSELD--------E-EFDVIESFAIPLPILVISK-MLGI 133 (367)
T ss_dssp THHHHHHHTTGGGG-SGGGSCH--HHHHHHHHHHHHTCC--------S-EEEHHHHTTTHHHHHHHHH-HHTC
T ss_pred hhHHHHHHHHHHhc-CHhhhcc--hHHHHHHHHHHHhcc--------C-CcchHHHHHHhhHHHHHHH-HcCC
Confidence 99999999999999 8888877 999999999998874 2 58999766 7999999999 6884
No 73
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=99.19 E-value=4.5e-11 Score=96.81 Aligned_cols=125 Identities=14% Similarity=0.121 Sum_probs=92.8
Q ss_pred hHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh-hhhhccCCccceeecCCChhHHHHHHH
Q 040505 87 FKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTM-GTEYLSGGFLSIAVVPWGQQWKKMRKV 165 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~w~~~R~~ 165 (228)
+..+.++++ +|| |+++..+ .+++++++.+++++.+ ..|+.++... .......+ .+ ++..+|+.|+++||+
T Consensus 23 ~~~~~~lr~-~~p-v~~~~~g---~~~v~~~~~v~~~l~d--~~fs~~~~~~~~~~~~~~~-~~-l~~~dg~~h~~~R~~ 93 (394)
T 2wiy_A 23 YPWYRRLQQ-DHP-VHKLEDG---TYLVSRYADVSHFAKL--PIMSVEPGWADAGPWAVAS-DT-ALGSDPPHHTVLRRQ 93 (394)
T ss_dssp HHHHHHHHH-HCS-EEECTTS---CEEECCHHHHHHHTTS--TTEECHHHHHTCGGGGGGG-GS-GGGCCTTHHHHHHHH
T ss_pred cHHHHHHHh-cCC-eEEecCC---eEEEcCHHHHHHHHcC--CCccccccccccccchhcc-cc-cccCCchHHHHHHHH
Confidence 666777755 588 9877542 6889999999999953 2444332111 11111111 22 566779999999999
Q ss_pred HHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHHHHHHHcCC
Q 040505 166 VASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMFSR 228 (228)
Q Consensus 166 ~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~dii~~~~fG~ 228 (228)
+++.| +.+.++.+.+.+.+.++++++.|. .+.++|+.+.+..+++++++..+||.
T Consensus 94 ~~~~f-s~~~~~~~~~~i~~~~~~l~~~~~-------~~~~~d~~~~~~~~~~~vi~~~~~G~ 148 (394)
T 2wiy_A 94 TNKWF-TPKLVDGWVRTTRELVGDLLDGVE-------AGQVIEARRDLAVVPTHVTMARVLQL 148 (394)
T ss_dssp HHTTC-SHHHHHHHTHHHHHHHHHHHHTCC-------TTCCEEHHHHHTHHHHHHHHHHHHTC
T ss_pred HHhcc-CHHHHHHHHHHHHHHHHHHHHHHh-------ccCCeeHHHHHHhhhHHHHHHHHcCC
Confidence 99999 899999999999999999988773 12379999999999999999999983
No 74
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=99.17 E-value=1e-11 Score=101.31 Aligned_cols=121 Identities=10% Similarity=0.051 Sum_probs=90.1
Q ss_pred hHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCc-h---------hhhhhccCCccceeecCCC
Q 040505 87 FKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPL-T---------MGTEYLSGGFLSIAVVPWG 156 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~g 156 (228)
+.. ++.++||| ++++..++.. +++++++.+++++.+.. +..... . ......+ ..++..+|
T Consensus 36 ~~~--~~lr~~gp-v~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~dg 105 (416)
T 3p3o_A 36 WDS--PEVAEARE-KSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMV----DFLQSLDG 105 (416)
T ss_dssp TTS--HHHHHHHH-HCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHH----HSGGGCCH
T ss_pred chH--HHHHHhCC-ccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhc----CccccCCc
Confidence 554 66678998 9998886655 89999999999996542 322111 0 0111112 22667779
Q ss_pred hhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHHHcC
Q 040505 157 QQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKIMFS 227 (228)
Q Consensus 157 ~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~~fG 227 (228)
+.|+++||+++++| +.+.++.+.+.+.++++++++.| + . + ++|+...+ ..+++++|+.+ ||
T Consensus 106 ~~h~~~Rr~~~~~f-s~~~l~~~~~~i~~~~~~ll~~l-~---~-g---~~d~~~~~~~~~~~~vi~~l-~G 167 (416)
T 3p3o_A 106 ADHRRLRGLATHPF-TPRRITAVQPFVRSTVEQLIDKL-P---Q-G---DFDFVQHFPHPLPALVMCQL-LG 167 (416)
T ss_dssp HHHHHHHHTTCGGG-SHHHHHHHHHHHHHHHHHHHHTC-C---S-S---SEEHHHHTTTHHHHHHHHHH-HT
T ss_pred hHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHhh-c---c-C---CccHHHHHHHHHHHHHHHHH-hC
Confidence 99999999999999 89999999999999999999988 2 1 2 58865555 57999999984 77
No 75
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=99.05 E-value=7.8e-10 Score=90.02 Aligned_cols=127 Identities=13% Similarity=0.029 Sum_probs=87.6
Q ss_pred hHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCch---hhhhhccCCccceeecCCChhHHHHH
Q 040505 87 FKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLT---MGTEYLSGGFLSIAVVPWGQQWKKMR 163 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~w~~~R 163 (228)
+..+.++. ++|| |++. .+....++++++.+++++.+. ..|+..... ...........+.++..||++|+++|
T Consensus 37 ~~~~~~lR-~~gP-V~~~--~~~~~~~vt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~Dg~~H~r~R 111 (412)
T 4dnj_A 37 YPEQETLR-EAGP-VVYL--DKWNVYGVARYAEVYAVLNDP-LTFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHTRTR 111 (412)
T ss_dssp HHHHHHHH-HHCS-SEEE--TTTTEEEECSHHHHHHHHTCT-TTEESTTCSSSSCTTTSCCSSCCCTTTTCCTTHHHHHH
T ss_pred HHHHHHHH-hcCC-EEEE--CCCCEEEECCHHHHHHHHcCC-ccccCCCccccccccccccccCCCccccCChHHHHHHH
Confidence 66666664 5798 8754 455678899999999999543 333322111 11111111112336667899999999
Q ss_pred HHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccH-HHHHHHHHHHHHHHHH
Q 040505 164 KVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINV-RLVARRYCGNVIRKIM 225 (228)
Q Consensus 164 ~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~-~~~~~~~t~dii~~~~ 225 (228)
|+++++| +.++++.+++.+.+.++++++.+.+.. ..+|+ .+....+++++++.+.
T Consensus 112 ~~~~~~F-s~~~l~~~~~~i~~~~~~l~~~~~~~~------~~~D~v~~~~~~~~~~~i~~l~ 167 (412)
T 4dnj_A 112 AVLSKVL-SPATMKRLRDGFAAAADAKIDELLARG------GNIDAIADLAEAYPLSVFPDAM 167 (412)
T ss_dssp HHHHHHT-CHHHHHHHHHHHHHHHHHHHHHHHHTT------SEEETCCCCCCHHHHHHHHHHH
T ss_pred hhccccc-CHHHHHHhhHHHHHHHHHHHHhhhccC------CCceeHHHHHhhhhHhHHHHHc
Confidence 9999999 999999999999999999999886532 14553 4555678888888764
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=98.51 E-value=5e-07 Score=73.58 Aligned_cols=127 Identities=9% Similarity=0.002 Sum_probs=83.7
Q ss_pred hHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchhhhhhccCCccceeecCCChhHHHHHHHH
Q 040505 87 FKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVV 166 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~ 166 (228)
+..+.++.+..+++++....++ ..-+++..+.+++++.+. ..|+........ ..+......+...|+++|+++||++
T Consensus 40 ~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~-~~~~~~~~~~~~~D~p~H~r~Rrll 116 (417)
T 4dxy_A 40 HEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSDP-TRFSSEVIFLPK-EAGEKAQMVPTKMDPPEHTPYRKAL 116 (417)
T ss_dssp HHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEESSCCSSST-TSSCSSCTTTTTCCTTTHHHHHHHH
T ss_pred HHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcCc-hhccCCCccccc-ccccccccCcccCCcHHHHHHHHHh
Confidence 5555666555443355433333 456789999999999543 345433221111 1111112234556799999999999
Q ss_pred HHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHH-HHHHHHHHHHH
Q 040505 167 ASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVA-RRYCGNVIRKI 224 (228)
Q Consensus 167 ~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~-~~~t~dii~~~ 224 (228)
+++| +.++++.+++.+++.++++++.+.+. + ++|+...+ ..+++.+++.+
T Consensus 117 ~~~F-s~~~l~~~~~~i~~~~~~lld~l~~~----g---~~D~v~~~a~~l~~~vi~~l 167 (417)
T 4dxy_A 117 DKGL-NLAKIRKVEDKVREVASSLIDSFAAR----G---ECDFAAEYAELFPVHVFMAL 167 (417)
T ss_dssp HHHH-CHHHHHTTHHHHHHHHHHHHHHHHTT----S---EEEHHHHTTTTHHHHHHHHH
T ss_pred hhhc-CHHHHHHHHHHHHHHHHHHHHHhhhc----C---CeeeHHHHHhhhHHHHHHHH
Confidence 9999 99999999999999999999988542 1 67765544 56777777764
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=97.97 E-value=9.5e-09 Score=82.56 Aligned_cols=129 Identities=9% Similarity=-0.004 Sum_probs=80.6
Q ss_pred CCCC-CCCccccccccccc---CCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCch--
Q 040505 64 LPPG-PAPWPIVGSLPEMW---RNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLT-- 137 (228)
Q Consensus 64 ~pPg-P~~~p~~G~~~~~~---~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~-- 137 (228)
.||| ++++|++|+...+. ...+.+.++.+++++ | |++.. .+.+++++++.+++++.+ ..|++++..
T Consensus 35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--p-V~~~~---~~~~vv~~~~~v~~vl~d--~~f~~~~~~~~ 106 (381)
T 2yjn_B 35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--G-VRRSR---TETWVVADHATARQVLDD--PAFTRATGRTP 106 (381)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--C-EEECS---SSCEEECSHHHHHHHHHC--SSEESSCCCCC
T ss_pred CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--C-ceeCC---CCEEEEcCHHHHHHHHcC--CCcCCCccccc
Confidence 4677 44789999764421 122347788888866 7 98754 468899999999999965 345444211
Q ss_pred -hh------hhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHH
Q 040505 138 -MG------TEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVR 210 (228)
Q Consensus 138 -~~------~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~ 210 (228)
.. ...++ .+ ++..+|++| .++| + . .+.+++.++++++.|. + ++|+.
T Consensus 107 ~~~~~~~~~~~~~~---~~-l~~~dg~~H-------~~~F-t-----~-~~~i~~~~~~ll~~~~------g---~~Dl~ 159 (381)
T 2yjn_B 107 EWMRAAGAPPAEWA---QP-FRDVHAASW-------EGEV-P-----D-VGELAESFAGLLPGAG------A---RLDLV 159 (381)
T ss_dssp HHHHHHTCCHHHHT---HH-HHHHHHCCC-------CSCC-C-----C-CSCHHHHTSTTSCC---------------CC
T ss_pred ccccccccccchhh---hh-hhhCCchhh-------hhcc-C-----C-hHHHHHHHHHHHHhcc------C---cchHH
Confidence 10 11111 22 344458888 5667 4 3 7888899998888874 1 67887
Q ss_pred HHH-HHHHHHHHHHHHcCC
Q 040505 211 LVA-RRYCGNVIRKIMFSR 228 (228)
Q Consensus 211 ~~~-~~~t~dii~~~~fG~ 228 (228)
..+ ..+++++|+++ ||.
T Consensus 160 ~~~a~~l~~~vi~~l-~G~ 177 (381)
T 2yjn_B 160 GDFAWQVPVQGMTAV-LGA 177 (381)
T ss_dssp CCCCTHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHHH-cCC
Confidence 665 69999999995 873
No 78
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.05 E-value=5.5 Score=24.80 Aligned_cols=53 Identities=17% Similarity=0.120 Sum_probs=39.1
Q ss_pred ccccccccccCCCCchHHHHHHHHHhC-CceEEEEecCeeEEEEcCHHHHHHHHHh
Q 040505 72 PIVGSLPEMWRNKPTFKWIHGLMRELN-TNICCIRLGNVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 72 p~~G~~~~~~~~~~~~~~~~~~~~kyG-~~v~~~~~~~~~~v~i~~p~~~~~vl~~ 126 (228)
-+++|+..-.....+...+.++..+|| + |..+ .+|+-.|...+.+.++..+..
T Consensus 12 lYV~NL~~~~~~~~lk~~L~~lF~~yGG~-Vl~V-tgG~AfV~F~~~esA~~A~~~ 65 (96)
T 2diu_A 12 LYVYNLPANKDGKSVSNRLRRLSDNCGGK-VLSI-TGCSAILRFINQDSAERAQKR 65 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHTTTCC-EEEC-CTTCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHcCCe-eEEE-ecCEEEEEECCHHHHHHHHHH
Confidence 347888765432223345778899995 8 8887 568899999999999888854
No 79
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=56.57 E-value=32 Score=21.22 Aligned_cols=50 Identities=14% Similarity=0.198 Sum_probs=36.3
Q ss_pred ccccccccccCCCCchHHHHHHHHHhCCceEEEEec--------CeeEEEEcCHHHHHHHHHh
Q 040505 72 PIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG--------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 72 p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~--------~~~~v~i~~p~~~~~vl~~ 126 (228)
-++|+++.- -. ...+.++-.+||+ |..+.+. |.-.|...+++.++..+..
T Consensus 14 lfV~~Lp~~---~t-e~~L~~~F~~~G~-v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~ 71 (103)
T 1s79_A 14 VYIKGFPTD---AT-LDDIKEWLEDKGQ-VLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 71 (103)
T ss_dssp EEEECCCTT---CC-HHHHHHHHHTSSC-EEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTS
T ss_pred EEEECCCCC---CC-HHHHHHHHhhcCC-EEEEEEEECCCCCCccEEEEEECCHHHHHHHHHc
Confidence 356777643 12 5668889999998 8877763 3456778899999999853
No 80
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=55.97 E-value=34 Score=21.29 Aligned_cols=57 Identities=16% Similarity=0.119 Sum_probs=40.4
Q ss_pred CCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEec------CeeEEEEcCHHHHHHHHHh
Q 040505 65 PPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 65 pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~------~~~~v~i~~p~~~~~vl~~ 126 (228)
||.|...-++|+++.-. . ...+.++..+||+ |..+.+. +.-.|-..+++.+...+..
T Consensus 4 ~~~~~~~l~V~nlp~~~---t-~~~l~~~F~~~G~-v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 66 (115)
T 3lqv_A 4 PPEVNRILYIRNLPYKI---T-AEEMYDIFGKYGP-IRQIRVGNTPETRGTAYVVYEDIFDAKNAVDH 66 (115)
T ss_dssp CTTCCSEEEEESCCTTC---C-HHHHHHHHHTTSC-EEEEEEECSTTTTTCEEEEESSHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCCC---C-HHHHHHHHHhcCC-eEEEEEeeCCCCCcEEEEEECCHHHHHHHHHH
Confidence 45555555788876432 2 5668889999998 8888762 2457788899998888853
No 81
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=55.31 E-value=28 Score=20.93 Aligned_cols=50 Identities=10% Similarity=0.044 Sum_probs=35.2
Q ss_pred ccccccccccCCCCchHHHH----HHHHHhCCceEEEEec------CeeEEEEcCHHHHHHHHHh
Q 040505 72 PIVGSLPEMWRNKPTFKWIH----GLMRELNTNICCIRLG------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 72 p~~G~~~~~~~~~~~~~~~~----~~~~kyG~~v~~~~~~------~~~~v~i~~p~~~~~vl~~ 126 (228)
-++|+++.-.. ...+. ++..+||+ |..+.+. +.-.|-..+++.++..+..
T Consensus 12 l~V~nL~~~~~----~~~l~~~l~~~F~~~G~-v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~~ 71 (96)
T 2dgx_A 12 VQVSNIDYRLS----RKELQQLLQEAFARHGK-VKSVELSPHTDYQLKAVVQMENLQDAIGAVNS 71 (96)
T ss_dssp EEEESCCTTSC----HHHHHHHHHHHHHHHSC-EEEEEECSCCSTTCCEEEEESSHHHHHHHHHH
T ss_pred EEEECCCCCCC----HHHHHHHHHHhccccCc-EEEEEEEeCCCCCeEEEEEECCHHHHHHHHHH
Confidence 35788774322 34455 88899998 8888774 2346778899999888853
No 82
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=54.93 E-value=26 Score=19.68 Aligned_cols=40 Identities=13% Similarity=0.120 Sum_probs=29.6
Q ss_pred hHHHHHHHHHhCCceEEEEec---------CeeEEEEcCHHHHHHHHHhc
Q 040505 87 FKWIHGLMRELNTNICCIRLG---------NVHVIPVTSPEIALEFLKVH 127 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~---------~~~~v~i~~p~~~~~vl~~~ 127 (228)
...+.++.++||+ |..+.+. +.-.|-..+++.++..+..+
T Consensus 13 ~~~l~~~F~~~G~-i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 61 (75)
T 1iqt_A 13 EEKIREYFGGFGE-VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 61 (75)
T ss_dssp HHHHHHHHHHHSC-CSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTS
T ss_pred HHHHHHHHHhcCC-eEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhC
Confidence 5668888899998 8777652 23456778999999988543
No 83
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=49.01 E-value=40 Score=20.01 Aligned_cols=50 Identities=8% Similarity=0.114 Sum_probs=35.9
Q ss_pred CCcccccccccccCCCCchHHHHHHHHHhCCceEEEEec----CeeEEEEcCHHHHHHH
Q 040505 69 APWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG----NVHVIPVTSPEIALEF 123 (228)
Q Consensus 69 ~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~----~~~~v~i~~p~~~~~v 123 (228)
...-++|++..-. . ...+.++.++||+ |..+.+. |--.|-..+++.++.+
T Consensus 11 ~~~l~V~~Lp~~~---t-e~~L~~~F~~~G~-i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 11 GSKVFVGRCTEDM---T-AEELQQFFCQYGE-VVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp CCEEEEESCCTTC---C-HHHHHHHHTTTSC-EEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CCEEEEeCCCCCC---C-HHHHHHHHhccCC-EEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 3344678877432 2 5668899999998 9888874 3457788899988753
No 84
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=42.35 E-value=45 Score=18.67 Aligned_cols=38 Identities=8% Similarity=0.045 Sum_probs=28.4
Q ss_pred hHHHHHHHHHhCCceEEEEecC---------eeEEEEcCHHHHHHHHH
Q 040505 87 FKWIHGLMRELNTNICCIRLGN---------VHVIPVTSPEIALEFLK 125 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~~---------~~~v~i~~p~~~~~vl~ 125 (228)
...+.++-++||+ |..+.+.. --.|-..+++.++.++.
T Consensus 13 ~~~l~~~F~~~G~-i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~ 59 (75)
T 2mss_A 13 VEDVKHYFEQFGK-VDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 59 (75)
T ss_dssp HHHHHHHHHTTSC-CSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHS
T ss_pred HHHHHHHHHhcCC-EEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 5668888899998 87776531 24566789999988884
No 85
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=41.92 E-value=48 Score=19.69 Aligned_cols=55 Identities=15% Similarity=0.127 Sum_probs=35.8
Q ss_pred cccccccccccCCCCchHHHHHHHHHhCCceEEEEec------CeeEEEEcCHHHHHHHHHh
Q 040505 71 WPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 71 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~------~~~~v~i~~p~~~~~vl~~ 126 (228)
.-++|+++.-.....+...+.++..+||+ |..+.+. +.-.|-..+++.++..+..
T Consensus 10 ~l~V~nLp~~~~~~~l~~~l~~~f~~~G~-i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 10 TIYINNLNEKIKKDELKKSLHAIFSRFGQ-ILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHGGGSC-EEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhCCC-EEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 34578876432211112233388899998 8888764 4457788899999888854
No 86
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=40.16 E-value=67 Score=20.06 Aligned_cols=50 Identities=18% Similarity=0.235 Sum_probs=36.8
Q ss_pred ccccccccccCCCCchHHHHHHHHHhCCceEEEEec--CeeEEEEcCHHHHHHHHHh
Q 040505 72 PIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG--NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 72 p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~--~~~~v~i~~p~~~~~vl~~ 126 (228)
-++||+..-.. .+.+.++.++||+ |..+.+. +.-+|-..+++.++..+..
T Consensus 19 l~V~nLp~~~t----~~~l~~~F~~~G~-v~~~~i~~~g~afV~f~~~~~a~~Ai~~ 70 (115)
T 3beg_B 19 VVVSGLPPSGS----WQDLKDHMREAGD-VCYADVYRDGTGVVEFVRKEDMTYAVRK 70 (115)
T ss_dssp EEEEECCSSCC----TTHHHHHHGGGSC-EEEEEECTTSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCCC----HHHHHHHHHhcCC-eEEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 35788774322 4457888899998 8888764 4567778899999988864
No 87
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=37.10 E-value=82 Score=20.22 Aligned_cols=52 Identities=10% Similarity=-0.081 Sum_probs=36.9
Q ss_pred CcccccccccccCCCCchHHHHHHHHHhCCceEEEEec---------CeeEEEEcCHHHHHHHHHh
Q 040505 70 PWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG---------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 70 ~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~---------~~~~v~i~~p~~~~~vl~~ 126 (228)
..-++|++..-. . ...+.++.++||+ |..+.+. +.-+|-..+++.++..+..
T Consensus 47 ~~l~V~nLp~~~---t-e~~L~~~F~~~G~-I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 47 CCLGVFGLSLYT---T-ERDLREVFSKYGP-IADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp SCBCEETCTTSC---C-HHHHHHHHTTTSC-EEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCCCC---C-HHHHHHHHHhcCC-eEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 344677776432 2 5668888899998 8887763 2346778899999998864
No 88
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=33.57 E-value=69 Score=18.27 Aligned_cols=39 Identities=18% Similarity=0.163 Sum_probs=29.8
Q ss_pred hHHHHHHHHHhCCceEEEEec-------CeeEEEEcCHHHHHHHHHh
Q 040505 87 FKWIHGLMRELNTNICCIRLG-------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~-------~~~~v~i~~p~~~~~vl~~ 126 (228)
...+.+.-.+||+ |..+.+. +.-.|-..+++.++..+..
T Consensus 21 ~~~l~~~F~~~G~-i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 21 KNVIHKIFSKFGK-ITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp HHHHHHHHHTTCC-EEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred HHHHHHHHhhcCC-eEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 3667888899998 8888764 3346778899999988853
No 89
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=32.19 E-value=92 Score=19.34 Aligned_cols=49 Identities=10% Similarity=0.066 Sum_probs=35.5
Q ss_pred cccccccccCCCCchHHHHHHHHHhCCceEEEEecC-------eeEEEEcCHHHHHHHHHh
Q 040505 73 IVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGN-------VHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 73 ~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~-------~~~v~i~~p~~~~~vl~~ 126 (228)
++|++..-. . ...+.++.++||+ |..+.+.. --.|-..+++.++..+..
T Consensus 9 fV~nLp~~~---t-e~~L~~~F~~~G~-v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 9 FIKNLDKSI---D-NKALYDTFSAFGN-ILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEESCCTTC---C-HHHHHHHHGGGSC-EEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EECCCCCCC---C-HHHHHHHHhccCC-EEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 577776432 2 5678899999998 87776521 246788899999988854
No 90
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=32.00 E-value=86 Score=18.93 Aligned_cols=49 Identities=14% Similarity=0.161 Sum_probs=34.7
Q ss_pred cccccccccCCCCchHHHHHHHHHhCCceEEEEec-----C----eeEEEEcCHHHHHHHHHh
Q 040505 73 IVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG-----N----VHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 73 ~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~-----~----~~~v~i~~p~~~~~vl~~ 126 (228)
++||++.-. . ...+.++-++||+ |..+.+. + --.|-..+++.++..+..
T Consensus 23 fV~nLp~~~---t-e~~L~~~F~~~G~-I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 23 IVNYLPQNM---T-QDELRSLFSSIGE-VESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEESCCTTC---C-HHHHHHHHHTTSC-EEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCCC---C-HHHHHHHHHhcCC-EEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 567776432 2 5678889999998 8877652 1 135778899999888854
No 91
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.94 E-value=78 Score=18.12 Aligned_cols=50 Identities=12% Similarity=-0.021 Sum_probs=34.4
Q ss_pred cccccccccccCCCCchHHHHHHHHHhCCceEEEEecC---------eeEEEEcCHHHHHHHHH
Q 040505 71 WPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGN---------VHVIPVTSPEIALEFLK 125 (228)
Q Consensus 71 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~---------~~~v~i~~p~~~~~vl~ 125 (228)
.-++|+++.-. . ...+.++.++||+ |..+.+.. --.|-..+++.++..+.
T Consensus 7 ~l~v~nlp~~~---t-~~~l~~~f~~~G~-i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 7 GLYIRGLQPGT---T-DQDLVKLCQPYGK-IVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp EEEEESCCTTC---C-HHHHHTTSTTTSC-EEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCCCC---C-HHHHHHHHHhcCC-eEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 34567776432 1 5567888889998 88777532 24677889998888875
No 92
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.23 E-value=86 Score=18.36 Aligned_cols=56 Identities=13% Similarity=0.014 Sum_probs=37.9
Q ss_pred CCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEec---------CeeEEEEcCHHHHHHHHHh
Q 040505 66 PGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG---------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 66 PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~---------~~~~v~i~~p~~~~~vl~~ 126 (228)
|.|...-++|+++.-. . ...+.++.++||+ |..+.+. +.-.|-..+++.++..+..
T Consensus 12 ~~~~~~l~v~nlp~~~---t-~~~l~~~f~~~G~-v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 12 PDPNCCLGVFGLSLYT---T-ERDLREVFSKYGP-IADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp CCGGGCEEEESCCSSC---C-HHHHHHHHHTTSC-EEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCC---C-HHHHHHHHHhcCC-eeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3343344678876432 2 5668889999998 8777762 1235677899999988854
No 93
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=30.19 E-value=1.1e+02 Score=19.65 Aligned_cols=54 Identities=13% Similarity=0.103 Sum_probs=35.5
Q ss_pred ccccccccccCCCCchHHHHHHHHHhCCceEEEEec------CeeEEEEcCHHHHHHHHHh
Q 040505 72 PIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 72 p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~------~~~~v~i~~p~~~~~vl~~ 126 (228)
-++|++..-.....+...+.++..+||+ |..+.+. |.-+|...+++.+...+..
T Consensus 32 LfV~nL~~~~~e~~L~~~L~~~F~~~G~-I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 32 VLITNINPEVPKEKLQALLYALASSQGD-ILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHHHSC-EEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhccCCC-eEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 4568877432211112235578899998 8887763 3457888899998888854
No 94
>3ctr_A Poly(A)-specific ribonuclease PARN; protein-RNA-complex, M7G-CAP, M7GTP, RNA recognition motif, RRM, cytoplasm, exonuclease, hydrolase, magnesium; HET: MGP; 2.10A {Homo sapiens}
Probab=29.82 E-value=46 Score=20.78 Aligned_cols=49 Identities=8% Similarity=0.098 Sum_probs=34.7
Q ss_pred hHHHHHHHHHhCCceEEEEecC-eeEEEEcCHHHHHHHHHh--cCCCCCCCCc
Q 040505 87 FKWIHGLMRELNTNICCIRLGN-VHVIPVTSPEIALEFLKV--HDSVFASRPL 136 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~~-~~~v~i~~p~~~~~vl~~--~~~~~~~~~~ 136 (228)
...+.++-+.||. +..-|+-. .-.+++++|+.+++++.. .+..|.-+.+
T Consensus 19 t~Di~~lFs~fgg-v~I~WidDTsAlvvf~~~~~a~~al~~i~~~~~y~i~ty 70 (101)
T 3ctr_A 19 TSDLYQLFSAFGN-IQISWIDDTSAFVSLSQPEQVKIAVNTSKYAESYRIQTY 70 (101)
T ss_dssp HHHHHHHTTTSEE-EEEEEEETTEEEEEEEEECHHHHHHHHHTTCSSCCCCCH
T ss_pred hHHHHHHHhccCC-EEEEEEcCCeEEEEecCHHHHHHHHHhcccCCceEEEEh
Confidence 4567888888986 76666653 567889999999999964 3444544443
No 95
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=29.33 E-value=96 Score=18.65 Aligned_cols=51 Identities=8% Similarity=0.045 Sum_probs=37.4
Q ss_pred cccccccccccCCCCchHHHHHHHHHhCCceEEEEec-CeeEEEEcCHHHHHHHHHh
Q 040505 71 WPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG-NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 71 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~-~~~~v~i~~p~~~~~vl~~ 126 (228)
.-++|++..-. . ...+.++.++||+ |..+.+. +.-+|-..+++.++..+..
T Consensus 13 ~l~V~nl~~~~---t-~~~l~~~F~~~G~-i~~v~~~~~~afV~f~~~~~a~~A~~~ 64 (103)
T 2dgu_A 13 VLFVRNLANTV---T-EEILEKAFSQFGK-LERVKKLKDYAFIHFDERDGAVKAMEE 64 (103)
T ss_dssp CEEEECCCTTC---C-HHHHHHHHHHHSC-EEEEEECSSCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCC---C-HHHHHHHHHhcCC-EEEEEEECCEEEEEeCCHHHHHHHHHH
Confidence 34678776432 2 5668899999998 8888764 3556778899999988864
No 96
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=28.16 E-value=1.1e+02 Score=19.02 Aligned_cols=47 Identities=9% Similarity=0.092 Sum_probs=33.8
Q ss_pred hHHHHHHHHHhCCceEEEEec-CeeEEEEcCHHHHHHHHHh--cCCCCCCC
Q 040505 87 FKWIHGLMRELNTNICCIRLG-NVHVIPVTSPEIALEFLKV--HDSVFASR 134 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~-~~~~v~i~~p~~~~~vl~~--~~~~~~~~ 134 (228)
...+.++.+.||. +..-|+- ..-.+++++|+.+++++.. ++..|.-+
T Consensus 29 t~DI~~lFs~fgg-v~I~WidDTsAlvvf~~~~~a~~al~~i~k~~~y~i~ 78 (100)
T 1whv_A 29 TSDLYQLFSAFGN-IQISWIDDTSAFVSLSQPEQVQIAVNTSKYAESYRIQ 78 (100)
T ss_dssp HHHHHHHHTTTCS-CCCEEEETTEEEEECSCHHHHHHHHHHHHHCCSSEEE
T ss_pred hHHHHHHhhccCC-EEEEEEcCCeEEEEecCHHHHHHHHHhcccCCceEEE
Confidence 4568888899996 6666664 3567889999999999963 34444433
No 97
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=28.12 E-value=1.5e+02 Score=20.33 Aligned_cols=49 Identities=16% Similarity=0.067 Sum_probs=35.5
Q ss_pred cccccccccCCCCchHHHHHHHHHhCCceEEEEec-----CeeEEEEcCHHHHHHHHHh
Q 040505 73 IVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG-----NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 73 ~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~-----~~~~v~i~~p~~~~~vl~~ 126 (228)
++||+..- -. .+.+.+...+||. |..+.+. +.-+|-..|++.++.....
T Consensus 50 ~VgNL~~~---vt-ed~L~~~Fs~fG~-V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 50 IVENLFYP---VT-LDVLHQIFSKFGT-VLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp EECSCCSC---CC-HHHHHHHHHHHSC-EEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEeCcCCC---CC-HHHHHHHHHhcCC-EEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 46887532 22 5678999999998 8888763 2357778899988888754
No 98
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=27.62 E-value=1e+02 Score=18.29 Aligned_cols=50 Identities=14% Similarity=0.213 Sum_probs=36.9
Q ss_pred cccccccc-ccCCCCchHHHHHHHHHhCCceEEEEec-CeeEEEEcCHHHHHHHHHh
Q 040505 72 PIVGSLPE-MWRNKPTFKWIHGLMRELNTNICCIRLG-NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 72 p~~G~~~~-~~~~~~~~~~~~~~~~kyG~~v~~~~~~-~~~~v~i~~p~~~~~vl~~ 126 (228)
-++|+++. -. . ...+.++..+||+ |..+.+. +.-.|-..+++.++..+..
T Consensus 13 l~V~nlp~~~~---t-~~~l~~~F~~~G~-v~~v~i~~g~afV~f~~~~~A~~A~~~ 64 (96)
T 2kvi_A 13 LFIGNLPLKNV---S-KEDLFRIFSPYGH-IMQINIKNAFGFIQFDNPQSVRDAIEC 64 (96)
T ss_dssp EEEESSTTSCC---C-HHHHHHHHTTTCC-CCEEEEETTEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCcccC---C-HHHHHHHHHhcCC-EEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 35788774 22 1 5668888999998 8777763 4567788999999998864
No 99
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.07 E-value=1.1e+02 Score=18.75 Aligned_cols=56 Identities=13% Similarity=-0.027 Sum_probs=39.2
Q ss_pred CCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEec---CeeEEEEcCHHHHHHHHHh
Q 040505 67 GPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG---NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 67 gP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~---~~~~v~i~~p~~~~~vl~~ 126 (228)
.|...-++||++.- ......+.++.++||. |..+.+. +.-+|-..+++.+...+..
T Consensus 13 ~p~~~l~V~nLp~~---~~te~dL~~lF~~fG~-V~~v~i~~~kg~aFVef~~~~~A~~Ai~~ 71 (102)
T 1x4d_A 13 ETRRVVHIMDFQRG---KNLRYQLLQLVEPFGV-ISNHLILNKINEAFIEMATTEDAQAAVDY 71 (102)
T ss_dssp CCCCEEEEESCCCS---SSHHHHHHTTTGGGSC-EEEEEECSSSSCEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCC---cCCHHHHHHHHHhcCC-EEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 34444567888741 1114567888899998 9888874 3457888899998888753
No 100
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=26.78 E-value=64 Score=20.41 Aligned_cols=61 Identities=7% Similarity=-0.074 Sum_probs=36.7
Q ss_pred CCCCCCcccccccccccC--CCC----chHHHHHHHHHhCCceEEEEec-----CeeEEEEcCHHHHHHHHHh
Q 040505 65 PPGPAPWPIVGSLPEMWR--NKP----TFKWIHGLMRELNTNICCIRLG-----NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 65 pPgP~~~p~~G~~~~~~~--~~~----~~~~~~~~~~kyG~~v~~~~~~-----~~~~v~i~~p~~~~~vl~~ 126 (228)
+|.|..+-.+.|+..... +.. +...+.+...+||. |..+.+. |.-.|-..+++.++..+..
T Consensus 3 ~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~-V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~ 74 (114)
T 3s6e_A 3 QPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGG-VIHIYVDKNSAQGNVYVKCPSIAAAIAAVNA 74 (114)
T ss_dssp CCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTC-CSEEEECTTCTTCCEEEECSSHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCC-EEEEEEecCCCcEEEEEEECCHHHHHHHHHH
Confidence 566655555666654322 111 22344555679998 8887763 3446677788888877744
No 101
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=26.75 E-value=1.2e+02 Score=18.80 Aligned_cols=50 Identities=14% Similarity=0.096 Sum_probs=36.2
Q ss_pred ccccccccccCCCCchHHHHHHHHHhCCceEEEEec---------CeeEEEEcCHHHHHHHHHh
Q 040505 72 PIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG---------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 72 p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~---------~~~~v~i~~p~~~~~vl~~ 126 (228)
-++|++..-. . ...+.++.++||+ |..+.+. +.-.|...+++.++..+..
T Consensus 9 lfV~nL~~~~---t-e~~L~~~F~~~G~-i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 9 VTFARLNDNV---R-ETFLKDMCRKYGE-VEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp EEEESCCTTC---C-HHHHHHHHTTTSC-EEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEECCCCCC---C-HHHHHHHHHhcCC-eeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 4678876432 2 5678889999998 8887752 1236788899999998854
No 102
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=26.07 E-value=1.1e+02 Score=18.23 Aligned_cols=39 Identities=5% Similarity=0.043 Sum_probs=29.9
Q ss_pred hHHHHHHHHHhCCceEEEEec----CeeEEEEcCHHHHHHHHHh
Q 040505 87 FKWIHGLMRELNTNICCIRLG----NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~----~~~~v~i~~p~~~~~vl~~ 126 (228)
...+.++.++||+ |..+.+. +.-.|-..+++.++..+..
T Consensus 14 ~~~l~~~F~~~G~-i~~v~i~~~~~g~afV~f~~~~~a~~A~~~ 56 (101)
T 2hvz_A 14 KGELERAFSYYGP-LRTVWIARNPPGFAFVEFEDPRDAEDAVRG 56 (101)
T ss_dssp HHHHHHHHHHHCC-CSEEEEESSSSSEEEEECSSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCC-eEEEEEeeCCCCEEEEEECCHHHHHHHHHH
Confidence 5668889999998 8777653 3456778899999888863
No 103
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.98 E-value=1.1e+02 Score=18.10 Aligned_cols=50 Identities=16% Similarity=0.174 Sum_probs=35.3
Q ss_pred ccccccccccCCCCchHHHHHHHHHhCCceEEEEec------------CeeEEEEcCHHHHHHHHHh
Q 040505 72 PIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG------------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 72 p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~------------~~~~v~i~~p~~~~~vl~~ 126 (228)
-++|+++.-. . ...+.++.++||+ |..+.+. +.-+|-..+++.++..+..
T Consensus 8 l~V~nLp~~~---t-~~~l~~~F~~~G~-i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 8 LFIKNLNFST---T-EETLKGVFSKVGA-IKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp EEEESCCTTC---C-HHHHHHHHHTTSC-EEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCC---C-HHHHHHHHHhcCC-eEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 3567776432 2 5668888999998 8777653 1236678899999999864
No 104
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.70 E-value=1.3e+02 Score=18.78 Aligned_cols=54 Identities=15% Similarity=0.073 Sum_probs=39.3
Q ss_pred CCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEec---CeeEEEEcCHHHHHHHHHh
Q 040505 68 PAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG---NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 68 P~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~---~~~~v~i~~p~~~~~vl~~ 126 (228)
|...-++|+++.-. . ...+.++-.+||. |..+.+. +.-+|-..+++.++..+..
T Consensus 15 ~~~~LfV~nLp~~v---t-e~dL~~lF~~fG~-V~~v~i~~~kGfaFVeF~~~~~A~~Ai~~ 71 (105)
T 1sjq_A 15 PSRVIHIRKLPIDV---T-EGEVISLGLPFGK-VTNLLMLKGKNQAFIEMNTEEAANTMVNY 71 (105)
T ss_dssp CCCEEEECSCCTTS---C-HHHHHHHHHHHCC-EEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCC---C-HHHHHHHHHhcCC-EEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 33345678887532 2 5668999999998 8888764 4567888899998888853
No 105
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.73 E-value=1.2e+02 Score=18.38 Aligned_cols=50 Identities=18% Similarity=0.258 Sum_probs=37.3
Q ss_pred ccccccccccCCCCchHHHHHHHHHhCCceEEEEec--CeeEEEEcCHHHHHHHHHh
Q 040505 72 PIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG--NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 72 p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~--~~~~v~i~~p~~~~~vl~~ 126 (228)
-++|++..- -. ...+.++.++||+ |..+.+. +.-+|-..+++.++..+..
T Consensus 18 l~V~nLp~~---~t-~~~l~~~F~~~G~-i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 18 VVVSGLPPS---GS-WQDLKDHMREAGD-VCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEESCCSS---CC-HHHHHHHHGGGSC-EEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC---CC-HHHHHHHHHhcCC-EeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 457887743 22 5668889999998 8887764 4567788899999988864
No 106
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.69 E-value=1.2e+02 Score=18.15 Aligned_cols=54 Identities=15% Similarity=0.079 Sum_probs=37.2
Q ss_pred CCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEec-------CeeEEEEcCHHHHHHHHHh
Q 040505 68 PAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG-------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 68 P~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~-------~~~~v~i~~p~~~~~vl~~ 126 (228)
+...-++|++..-.. ...+.++..+||+ |..+.+. +.-+|-..+++.++..+..
T Consensus 14 ~~~~l~V~nlp~~~t----~~~l~~~F~~~G~-i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2d9p_A 14 QVVNLYVKNLDDGID----DERLRKAFSPFGT-ITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE 74 (103)
T ss_dssp SCCCEEEECCCTTCC----HHHHHHTTTTTSC-EEEEEEEECSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCC----HHHHHHHHHhcCC-EEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHH
Confidence 333456788764321 4567888889998 8777653 2346778899999988864
No 107
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=23.97 E-value=1.1e+02 Score=17.53 Aligned_cols=51 Identities=12% Similarity=0.033 Sum_probs=35.4
Q ss_pred cccccccccccCCCCchHHHHHHHHHhCCceEEEEec---------CeeEEEEcCHHHHHHHHHh
Q 040505 71 WPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG---------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 71 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~---------~~~~v~i~~p~~~~~vl~~ 126 (228)
.-++|+++.-. . ...+.++..+||+ |..+.+. +--.|-..+++.++..+..
T Consensus 13 ~l~V~nlp~~~---t-~~~l~~~F~~~G~-i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 72 (87)
T 3s7r_A 13 KMFVGGLSWDT---S-KKDLKDYFTKFGE-VVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 72 (87)
T ss_dssp EEEEECCCTTC---C-HHHHHHHHTTTSC-EEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHS
T ss_pred EEEEeCCCCCC---C-HHHHHHHHHhCCC-EEEEEEeecCCCCccccEEEEEECCHHHHHHHHHh
Confidence 34678877432 2 5668888899998 8777652 1235677899998888844
No 108
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.87 E-value=1.3e+02 Score=18.45 Aligned_cols=58 Identities=14% Similarity=0.092 Sum_probs=39.2
Q ss_pred ccccccccccCCCCchHHHHHHHHHhCCceEEEEec---CeeEEEEcCHHHHHHHHHh-cCCCCCCC
Q 040505 72 PIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG---NVHVIPVTSPEIALEFLKV-HDSVFASR 134 (228)
Q Consensus 72 p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~---~~~~v~i~~p~~~~~vl~~-~~~~~~~~ 134 (228)
-++||++.- -. ...+.++..+||+ |..+.+. +.-+|-..+++.++..+.. ++..+..+
T Consensus 13 l~V~nLp~~---~t-e~~L~~~F~~~G~-i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 74 (111)
T 1whx_A 13 ILAKNLPAG---TL-AAEIQETFSRFGS-LGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHV 74 (111)
T ss_dssp EEEESCCTT---CC-HHHHHHHHHTTSC-EEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSS
T ss_pred EEEeCCCCC---CC-HHHHHHHHHhcCC-EEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCe
Confidence 356776632 12 5678899999998 9888763 3457778899999888854 33334333
No 109
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.49 E-value=1.3e+02 Score=18.35 Aligned_cols=47 Identities=4% Similarity=0.009 Sum_probs=32.9
Q ss_pred cccccccccCCCCchHHHHHHHHHhCCceEEEEec---------CeeEEEEcCHHHHHHHH
Q 040505 73 IVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG---------NVHVIPVTSPEIALEFL 124 (228)
Q Consensus 73 ~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~---------~~~~v~i~~p~~~~~vl 124 (228)
++|++..-. . ...+.++..+||. |..+.+. +.-+|-..+++.++..+
T Consensus 29 ~V~nlp~~~---t-~~~l~~~F~~~G~-i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~ 84 (114)
T 2cq4_A 29 FCMQLAARI---R-PRDLEDFFSAVGK-VRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 84 (114)
T ss_dssp EEESCCTTC---C-HHHHHHHHTTTSC-EEEEEECCSCCSSSCCCCEEEEESCGGGHHHHH
T ss_pred EEeCCCCCC---C-HHHHHHHHHhCCC-EeEEEEEecCCCCccCcEEEEEeCcHHHHHHHH
Confidence 567765321 2 5668888899998 8888764 12466778888888777
No 110
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=23.27 E-value=1.6e+02 Score=19.16 Aligned_cols=49 Identities=16% Similarity=0.091 Sum_probs=35.3
Q ss_pred cccccccccCCCCchHHHHHHHHHhCCceEEEEecC-----eeEEEEcCHHHHHHHHHh
Q 040505 73 IVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGN-----VHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 73 ~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~-----~~~v~i~~p~~~~~vl~~ 126 (228)
++||+..- -. .+.+.++..+||. |..+.+.. +-+|-..|++.++..+..
T Consensus 32 ~V~NL~~~---vt-e~~L~~lFs~yG~-V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~~ 85 (130)
T 3zzy_A 32 IVENLFYP---VT-LDVLHQIFSKFGT-VLKIITFTKNNQFQALLQYADPVSAQHAKLS 85 (130)
T ss_dssp EEESCCSC---CC-HHHHHHHHTTSSC-EEEEEEEEETTEEEEEEEESCHHHHHHHHHH
T ss_pred EECCCCCC---CC-HHHHHHHHhCcCC-EEEEEEEcCCCCcEEEEEECCHHHHHHHHHH
Confidence 47887632 22 5668899999998 88877642 357788899888877744
No 111
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=22.51 E-value=1.3e+02 Score=17.82 Aligned_cols=56 Identities=14% Similarity=0.104 Sum_probs=36.0
Q ss_pred CCCCCcccccccccccCCCCchHHHHHHHHHhCCceEE--------EEec---------CeeEEEEcCHHHHHHHHHh
Q 040505 66 PGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICC--------IRLG---------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 66 PgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~--------~~~~---------~~~~v~i~~p~~~~~vl~~ 126 (228)
|.|...-++|++..-. . ...+.++.++||. |.. +.+. +.-.|...+++.++..+..
T Consensus 10 ~~~~~~l~V~nLp~~~---t-~~~l~~~F~~~G~-i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~~ 82 (99)
T 2la6_A 10 HSDNNTIFVQGLGENV---T-IESVADYFKQIGI-IKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDW 82 (99)
T ss_dssp CCCCSEEEEECCCSSC---C-HHHHHHHHTTTSC-BCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCCC---C-HHHHHHHHHHhCC-EeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 3333344678876432 2 5668888899998 765 4431 1235667899998888853
No 112
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.32 E-value=1.6e+02 Score=18.76 Aligned_cols=50 Identities=14% Similarity=0.034 Sum_probs=36.5
Q ss_pred cccccccccccCCCCchHHHHHHHHHhCCceEEEEec---CeeEEEEcCHHHHHHHHH
Q 040505 71 WPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG---NVHVIPVTSPEIALEFLK 125 (228)
Q Consensus 71 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~---~~~~v~i~~p~~~~~vl~ 125 (228)
.-++|++..-. . ...+.++..+||. |..+.+. +.-+|-..+.+.++..+.
T Consensus 33 ~LfVgNLp~~v---t-e~dL~~lF~~fG~-V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 33 VIHIRKLPIDV---T-EGEVISLGLPFGK-VTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp EEEEESCCTTC---C-HHHHHHHHTTTSC-CCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred EEEEeCCCCCC---C-HHHHHHHHHhcCC-EEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 44678887431 2 5668899999998 8777764 456777889998888875
No 113
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.08 E-value=1.4e+02 Score=17.87 Aligned_cols=55 Identities=13% Similarity=-0.010 Sum_probs=37.5
Q ss_pred CCCCcccccccccccCCCCchHHHHHHHHH-hCCceEEEEec--------CeeEEEEcCHHHHHHHHHh
Q 040505 67 GPAPWPIVGSLPEMWRNKPTFKWIHGLMRE-LNTNICCIRLG--------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 67 gP~~~p~~G~~~~~~~~~~~~~~~~~~~~k-yG~~v~~~~~~--------~~~~v~i~~p~~~~~vl~~ 126 (228)
.|...-++|++..-. . ...+.++..+ ||+ |..+.+. +.-.|-..+++.++..+..
T Consensus 7 ~~~~~l~V~nLp~~~---t-~~~l~~~F~~~~G~-v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 7 GPEYSLFVGDLTPDV---D-DGMLYEFFVKVYPS-CRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp SCCCCEEEECCCTTC---C-HHHHHHHHHHHCTT-EEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCcEEEEeCCCCCC---C-HHHHHHHHHHhCCC-eEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 333344678877432 2 5667888888 998 8777652 2246778899999999864
No 114
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=22.04 E-value=1.5e+02 Score=18.42 Aligned_cols=47 Identities=11% Similarity=-0.015 Sum_probs=33.2
Q ss_pred cccccccccCCCCchHHHHHHHHHhCCceEEEEec---------CeeEEEEcCHHHHHHHH
Q 040505 73 IVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG---------NVHVIPVTSPEIALEFL 124 (228)
Q Consensus 73 ~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~---------~~~~v~i~~p~~~~~vl 124 (228)
++|++..-. . ...+.++..+||+ |..+.+. +.-+|-..+++.++..+
T Consensus 40 ~V~nlp~~~---t-~~~l~~~F~~~G~-i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~ 95 (124)
T 2jwn_A 40 YVGNVDYGS---T-AQDLEAHFSSCGS-INRITILCDKFSGHPKGYAYIEFAERNSVDAAV 95 (124)
T ss_dssp EEEEECTTC---C-HHHHHHHHHTTSC-EEEEEEEEECTTSSCEEEEEEEESSHHHHHHHH
T ss_pred EEeCCCCCC---C-HHHHHHHHHhcCC-EEEEEEEecCCCCCcccEEEEEECCHHHHHHHH
Confidence 466665321 2 5668889999998 8777652 12367788999999888
No 115
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.91 E-value=1.1e+02 Score=16.88 Aligned_cols=40 Identities=3% Similarity=-0.072 Sum_probs=27.1
Q ss_pred hHHHHHHHHHhCCceEEEEecC---------eeEEEEcCHHHHHHHHHhc
Q 040505 87 FKWIHGLMRELNTNICCIRLGN---------VHVIPVTSPEIALEFLKVH 127 (228)
Q Consensus 87 ~~~~~~~~~kyG~~v~~~~~~~---------~~~v~i~~p~~~~~vl~~~ 127 (228)
...+.++-++||+ |..+.+.. .-.|-..+++.++..+...
T Consensus 14 ~~~l~~~F~~~G~-v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~ 62 (77)
T 1uaw_A 14 QEGLREYFGQFGE-VKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 62 (77)
T ss_dssp SHHHHHHHTTTSC-CCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTT
T ss_pred HHHHHHHHHhcCC-EEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhC
Confidence 4557888899997 76665421 2355567888888888544
No 116
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=21.71 E-value=1.5e+02 Score=18.35 Aligned_cols=50 Identities=18% Similarity=0.125 Sum_probs=35.6
Q ss_pred ccccccccccCCCCchHHHHHHHHHhCCceEEEEec--------CeeEEEEcCHHHHHHHHHh
Q 040505 72 PIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG--------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 72 p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~--------~~~~v~i~~p~~~~~vl~~ 126 (228)
-++|++..-. . ...+.++.++||+ |..+.+. +.-.|-..+++.++..+..
T Consensus 10 l~V~nLp~~~---t-~~~l~~~F~~~G~-i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 67 (116)
T 2fy1_A 10 LFIGGLNRET---N-EKMLKAVFGKHGP-ISEVLLIKDRTSKSRGFAFITFENPADAKNAAKD 67 (116)
T ss_dssp EEEECCTTTC---C-HHHHHHHHHTSSC-CSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHH
T ss_pred EEEeCCCCCC---C-HHHHHHHHHhcCC-EEEEEEEECCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3567776432 2 5668889999998 8777653 2346778899999998864
No 117
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.34 E-value=1.4e+02 Score=17.64 Aligned_cols=50 Identities=12% Similarity=0.079 Sum_probs=36.0
Q ss_pred ccccccccccCCCCchHHHHHHHHHhCCceEEEEec---------CeeEEEEcCHHHHHHHHHh
Q 040505 72 PIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG---------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 72 p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~---------~~~~v~i~~p~~~~~vl~~ 126 (228)
-++|+++.-. . ...+.++..+||+ |..+.+. +.-+|-..+++.++..+..
T Consensus 11 l~V~nlp~~~---t-~~~l~~~F~~~G~-i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 69 (99)
T 1whw_A 11 LFVRNLSYTS---S-EEDLEKLFSAYGP-LSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69 (99)
T ss_dssp EEEECCCTTC---C-HHHHHHHHHTTSC-EEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCC---C-HHHHHHHHHhcCC-EeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 3567776432 1 5668889999998 8888763 2346778899999988844
No 118
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=21.34 E-value=1.2e+02 Score=17.20 Aligned_cols=50 Identities=14% Similarity=0.037 Sum_probs=34.8
Q ss_pred ccccccccccCCCCchHHHHHHHHHhCCceEEEEecC---------eeEEEEcCHHHHHHHHHh
Q 040505 72 PIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGN---------VHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 72 p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~---------~~~v~i~~p~~~~~vl~~ 126 (228)
-++|++..-. . ...+.++.++||+ |..+.+.. .-.|-..+++.++..+..
T Consensus 9 l~v~nlp~~~---t-~~~l~~~F~~~G~-i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 9 VFVGDLSPEI---T-TAAIAAAFAPFGR-ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp EEEESCCTTC---C-HHHHHHHHGGGSC-EEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCC---C-HHHHHHHHHhcCC-EeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3567776431 2 5668888899998 87776521 236678899999988864
No 119
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.08 E-value=1.3e+02 Score=17.46 Aligned_cols=51 Identities=24% Similarity=0.157 Sum_probs=36.1
Q ss_pred cccccccccccCCCCchHHHHHHHHHhCCceEEEEecC---------eeEEEEcCHHHHHHHHHh
Q 040505 71 WPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGN---------VHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 71 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~---------~~~v~i~~p~~~~~vl~~ 126 (228)
.-++|++..-. . ...+.++.++||+ |..+.+.. .-.|-..+++.++..+..
T Consensus 7 ~l~v~nlp~~~---t-~~~l~~~f~~~G~-v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (95)
T 2dnz_A 7 GLYVGSLHFNI---T-EDMLRGIFEPFGK-IDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQ 66 (95)
T ss_dssp EEEEESCCTTC---C-HHHHHHHHTTTSC-EEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCCC---C-HHHHHHHHHhcCC-EeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 33567776432 2 5668888999998 88777632 346778899999998863
No 120
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=20.58 E-value=1.5e+02 Score=17.86 Aligned_cols=55 Identities=16% Similarity=0.185 Sum_probs=37.6
Q ss_pred cccccccccccCCCC--chHHHHHHHHHhCCceEEEEec-------CeeEEEEcCHHHHHHHHHh
Q 040505 71 WPIVGSLPEMWRNKP--TFKWIHGLMRELNTNICCIRLG-------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 71 ~p~~G~~~~~~~~~~--~~~~~~~~~~kyG~~v~~~~~~-------~~~~v~i~~p~~~~~vl~~ 126 (228)
.-++|+++.-..... ....+.++..+||+ |..+.+. |.-.|-..+++.++..+..
T Consensus 17 ~l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~-v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 17 VIVVDNVPQVGPDRLEKLKNVIHKIFSKFGK-ITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp EEEEESCCCCCTTTTTHHHHHHHHHHGGGSC-EEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred EEEEeCCCcchhhhhHHHHHHHHHHHhcCCC-EEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 446788875322110 24668888899998 8888764 3446777888888888854
No 121
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.52 E-value=1.4e+02 Score=17.60 Aligned_cols=51 Identities=12% Similarity=0.069 Sum_probs=35.9
Q ss_pred cccccccccccCCCCchHHHHHHHHHhCCceEEEEec--------CeeEEEEcCHHHHHHHHHh
Q 040505 71 WPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG--------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 71 ~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~--------~~~~v~i~~p~~~~~vl~~ 126 (228)
.-++|+++.-. . ...+.++.++||+ |..+.+. +.-.|-..+++.++..+..
T Consensus 19 ~l~v~nlp~~~---t-~~~l~~~F~~~G~-i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 19 KLFISGLPFSC---T-KEELEEICKAHGT-VKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp CEEEESCCTTC---C-HHHHHHHHTTTSC-EEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCC---C-HHHHHHHHHhCCC-eEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 34577776432 2 5668888899998 8777753 2346778899999988854
No 122
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.48 E-value=1.2e+02 Score=18.60 Aligned_cols=50 Identities=8% Similarity=0.017 Sum_probs=34.0
Q ss_pred ccccccccccCCCCchHHHHHHHHHhCCceEEEEec-------CeeEEEEcCHHHHHHHHHh
Q 040505 72 PIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLG-------NVHVIPVTSPEIALEFLKV 126 (228)
Q Consensus 72 p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~-------~~~~v~i~~p~~~~~vl~~ 126 (228)
-++|++..-. . ...+.++.++||+ |..+.+. +.-.|-..+++.++..+..
T Consensus 32 l~V~nLp~~~---t-e~~l~~~F~~~G~-i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~~ 88 (109)
T 2err_A 32 LHVSNIPFRF---R-DPDLRQMFGQFGK-ILDVEIIFNERGSKGFGFVTFENSADADRAREK 88 (109)
T ss_dssp EEEESCCTTC---C-HHHHHHHGGGTCC-CSCEEECCBTTBCTTEEEEECCCSHHHHHHHHH
T ss_pred EEEECCCCcC---C-HHHHHHHHHhcCC-EEEEEEEECCCCCceEEEEEECCHHHHHHHHHH
Confidence 3567766421 2 5668888899998 7777663 2346677888888888753
No 123
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=20.06 E-value=1.4e+02 Score=17.12 Aligned_cols=47 Identities=11% Similarity=0.020 Sum_probs=31.9
Q ss_pred cccccccccCCCCchHHHHHHHHHhCCceEEEEecC---------eeEEEEcCHHHHHHHH
Q 040505 73 IVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGN---------VHVIPVTSPEIALEFL 124 (228)
Q Consensus 73 ~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~---------~~~v~i~~p~~~~~vl 124 (228)
++|+++.-. . ...+.++..+||+ |..+.+.. .-.|-..+++.++..+
T Consensus 10 ~V~nlp~~~---t-~~~l~~~F~~~G~-i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~ 65 (89)
T 3ucg_A 10 YVGNVDYGA---T-AEELEAHFHGCGS-VNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL 65 (89)
T ss_dssp EEESCCTTC---C-HHHHHHHHGGGCC-EEEEEEEESCSSSSCCEEEEEEESSTHHHHHHG
T ss_pred EEeCCCCCC---C-HHHHHHHHHhCCC-EEEEEEEecCCCCCcceEEEEEECCHHHHHHHH
Confidence 456655321 2 5668888899998 87776521 2366778888888887
Done!