BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040506
(365 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q59536|PTRB_MORLA Protease 2 OS=Moraxella lacunata GN=ptrB PE=3 SV=1
Length = 690
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 43/263 (16%)
Query: 14 PVPKKIPYEASAHGLTWQDPYHWMKNTNDPDFINHLNHENSYAQASMSDTQTLQRTLFSE 73
P+ K+IP+ HG +D Y+W+K+ ++ + I +L EN Y M Q ++
Sbjct: 4 PIAKRIPHPHELHGDVREDDYYWLKDRDNTEVIQYLEEENRYYHEIMRPLQEQTEQIYES 63
Query: 74 MKNRMPSKISTPPERWGPWLYYQYIPEGKEYPLLCRRLETEKSGWLQTVFHNVRGGFGKE 133
M +R+P P + G + YY + + K+YP+ R+ + LQ E
Sbjct: 64 MVDRVPDSEMKVPVQHGQFFYYSRLDKNKQYPIYARK-QAASRALLQD---------ATE 113
Query: 134 EILLDWNEIAEKYGYVHVGTCRVSPDHNFLAYTIDTSGDEQFMLQIKDLRNQCI----VP 189
E++LD NE+AE+ Y+ V R++ DH+ LAY + G +++ + IKDL + VP
Sbjct: 114 EVVLDLNELAEEDDYLSVTVQRMTTDHSRLAYLENRDGTDRYTIYIKDLNTGELLSDRVP 173
Query: 190 RVLCT-----------------------------KLGSDSTDDAPIFTEGDSGFCVDITS 220
V +LGSD D IF E D F + I+
Sbjct: 174 NVYIYGSMEWCRCGDYIFYTTVDEHQRPCQLWRHRLGSDVESDELIFEEKDDTFTLFISK 233
Query: 221 TKDGKFITVNSNSRASSEEGLCD 243
++ GKFI V S+S+ +SE + D
Sbjct: 234 SQSGKFIFVYSSSKTTSEIHMID 256
>sp|P55627|Y4QF_RHISN Uncharacterized peptidase y4qF OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01920 PE=3 SV=1
Length = 754
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 16/170 (9%)
Query: 13 PPVPKKIPYEASAHGLTWQDPYHWMKNTNDPDFINHLNHENSYAQASMSDTQTLQRTLFS 72
PP+P+ P H D Y W+++ +PD +L ENSYA+ + + + L+ L +
Sbjct: 39 PPLPRAEPRIRVLHDDVTVDRYGWLRDRENPDVRAYLEAENSYAEQATAHLRRLKTELIA 98
Query: 73 EMKNRMPSKISTPPERWGPWLYYQYIPEGKEYPLLCRRLETEKSGWLQTVFHNVRGGFGK 132
E++ R P + +TPP + GP+ Y+Q G +P+ RR T G
Sbjct: 99 EIEGRQPCEGATPPFQVGPFDYFQGHERGLPHPVWWRRPVTG----------------GS 142
Query: 133 EEILLDWNEIAEKYGYVHVGTCRVSPDHNFLAYTIDTSGDEQFMLQIKDL 182
E++LD N I + +G S D +LA+++D G E++ L+++D+
Sbjct: 143 AELVLDPNAIPGADVFYWLGVFEPSDDGRYLAFSVDLIGAERYELRVRDM 192
>sp|P24555|PTRB_ECOLI Protease 2 OS=Escherichia coli (strain K12) GN=ptrB PE=1 SV=2
Length = 686
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 138/359 (38%), Gaps = 76/359 (21%)
Query: 14 PVPKKIPYEASAHGLTWQDPYHWMKN--TNDPDFINHLNHENSYAQASMSDTQTLQRTLF 71
P +IP+ + HG T D Y+W+++ + P+ +++L ENSY M+ Q LQ +
Sbjct: 3 PKAARIPHAMTLHGDTRIDNYYWLRDDTRSQPEVLDYLQQENSYGHRVMASQQALQDRIL 62
Query: 72 SEMKNRMPSKISTPPERWGPWLYYQYIPEGKEYPLLCRRLETEKSGWLQTVFHNVRGGFG 131
E+ +R+P + + P + Y G EY + R Q+ F +
Sbjct: 63 KEIIDRIPQREVSAPYIKNGYRYRHIYEPGCEYAIYQR----------QSAFSE---EWD 109
Query: 132 KEEILLDWNEIAEKYGYVHVGTCRVSPDHNFLAYTIDTSGDEQFMLQIKDLRNQCIVPRV 191
+ E LLD N+ A + +G ++PD+ +A D Q+ ++ ++L P +
Sbjct: 110 EWETLLDANKRAAHSEFYSMGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPEL 169
Query: 192 LCT--------------------------------KLGSDSTDDAPIFTEGDSGFCVDIT 219
L +G+ ++ D I+ E D + V +
Sbjct: 170 LDNVEPSFVWANDSWIFYYVRKHPVTLLPYQVWRHAIGTPASQDKLIYEEKDDTYYVSLH 229
Query: 220 STKDGKFITVNSNSRASSEEGLCD--------------RCDQSIS-----------ENEE 254
T ++ ++ S +SE L D R D S N
Sbjct: 230 KTTSKHYVVIHLASATTSEVRLLDAEMADAEPFVFLPRRKDHEYSLDHYQHRFYLRSNRH 289
Query: 255 CSSGDYYLARCRAEKLYSANWQNIILPGEDISLQDMDIFDGHLVLFVSKKGVPMLCSID 313
+ Y R R E+ W+ +I P E+I L+ +F LV+ ++G+ L I+
Sbjct: 290 GKNFGLYRTRMRDEQ----QWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQIN 344
>sp|P55656|Y4SO_RHISN Uncharacterized peptidase y4sO OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01580 PE=3 SV=1
Length = 705
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 6 LASSSPPPPVPKKIPYEASAHGLTWQDPYHWMKNTNDPDFINHLNHENSYAQASMSDTQT 65
+ + S PP+P+ H D Y W+++ DPD + +L EN YA S
Sbjct: 1 MENKSLQPPLPRSERRIRVLHNDVTIDSYGWLRDREDPDVLAYLEAENHYADEVTSYVAE 60
Query: 66 LQRTLFSEMKNRMPSKISTPPERWGPWLYYQYIPEGKEYPLLCRRLETEKSGWLQTVFHN 125
L+ L +E++ R + PP + G + Y+Q +SG L + +
Sbjct: 61 LKADLIAEIEKRDSCDGAPPPFQVGFFFYFQ----------------KSQSGLLHSAWWR 104
Query: 126 VRGGFGKEEILLDWNEIAEKYGYVHVGTCRVSPDHNFLAYTIDTSGDEQFMLQIKDLRN 184
G EE++ D N + + +G S D ++A++ D G+E++ L+++D+ N
Sbjct: 105 RPVTGGPEELVFDPNTLPGAEVFYSLGALEPSDDGRYIAFSFDLIGNERYELRVRDMTN 163
>sp|Q5ZKL5|PPCEL_CHICK Prolyl endopeptidase-like OS=Gallus gallus GN=PREPL PE=2 SV=1
Length = 732
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 143/363 (39%), Gaps = 86/363 (23%)
Query: 53 NSYAQASMSDTQTLQRTLFSEMKNRMPSKISTPPERWGPWLYYQYIPEGKEYPLLCRRLE 112
N +++ + T+ ++ + E+ N+ + +P R+G +Y+ E Y +LC + +
Sbjct: 101 NKISRSYKAMTKRIKEKI-EELHNKYTLHLESPRMRFGGNVYF----EENGY-ILCSKAD 154
Query: 113 TEKSGWLQTVFHNVRGGFGKEEILLDWNEIAEKYGYVHVGTCRVSPDHNFLAYTIDTSGD 172
+K NV F E++ + ++ R+SPD +LA ++ +
Sbjct: 155 DDKG--------NVHILFSTEDM---------GFSGAYIKRIRISPDERYLATSLQSENS 197
Query: 173 EQFMLQIKDLRNQCIVPRVLCTKLGSD-STDDA--------------------------P 205
E+ I L + V V+ + +T+D
Sbjct: 198 EEATCVIMKLGDVPFVEEVIPNVFSFEWATNDVLYYTSQKNLKCQNVFMTTFTNEKYTKL 257
Query: 206 IFTEGDSGFCVDITSTKDGKFITVNSNSRASSEEGLCD-------------RCDQSISEN 252
++TE D+ F VDI TKD +F+T+NSNS+ +SE L D R I
Sbjct: 258 VYTEQDARFFVDIYCTKDRRFLTINSNSKTTSEVWLIDCRHPFKLPVLVQARTKGVIYHV 317
Query: 253 EECSS-----------GDYYLARCRAEKLYSANWQNIILPGEDISLQDMDIFDGHLVLFV 301
E ++ +Y L + NWQ + E L D+++F H ++F+
Sbjct: 318 EHRNNELYILTSYGEPAEYKLMKASVASTGMENWQLVYALEEKTKLIDLEMFRDHCIMFL 377
Query: 302 SKKGVPMLCSIDLSINFECKYQMEIENLNPWFFPLPSSSCSIVPGSNHDFMSSVYRAVLS 361
K G L +N ++++ LP+ +C+ S+ + SS L+
Sbjct: 378 QKAGY-------LYLNVIAFVSHSVQSIQ-----LPTWACAFELESHPEHASSTCYFQLT 425
Query: 362 SPV 364
SPV
Sbjct: 426 SPV 428
>sp|Q32N48|PPCEL_XENLA Prolyl endopeptidase-like OS=Xenopus laevis GN=prepl PE=2 SV=1
Length = 707
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 25/152 (16%)
Query: 173 EQFMLQIKDLRNQCIVPRVLCTKLGSDSTDDAPIFTEGDSGFCVDITSTKDGKFITVNSN 232
++ +L + QC +V T + ++TE D F VD+ T+D +FIT+NSN
Sbjct: 190 DRMLLHTSQVNVQC--RQVFATDFSDANGAAQLVYTENDPRFFVDLYCTRDKRFITINSN 247
Query: 233 SRASSEEGLCD-RCD-----------QSISENEECSSGDYYLARCRAE----KLYSA--- 273
S+++SE L D RC + E S+G Y+ R E K+ A
Sbjct: 248 SKSTSEVRLIDNRCPFEPPVLVQKRIAGVIYYIEHSNGCLYMLRRHGEAAEYKILKAAVS 307
Query: 274 ----NWQNIILPGEDISLQDMDIFDGHLVLFV 301
+W+ + E L DM++ H +LF+
Sbjct: 308 SGMKHWEPVYEVQERTKLVDMEMLKDHCLLFL 339
>sp|Q8C167|PPCEL_MOUSE Prolyl endopeptidase-like OS=Mus musculus GN=Prepl PE=2 SV=1
Length = 725
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 84/237 (35%), Gaps = 57/237 (24%)
Query: 134 EILLDWNEIAEKYGYVHVGTCRVSPDHNFLAYTIDTSGDEQFMLQIKDLRNQCIV----P 189
E+L + E+ K + RV+PD ++A I T E L + L +Q ++ P
Sbjct: 141 EVLFNLEEL--KLDQPFIDCIRVAPDEKYVAAKIRTEDSETSTLVVVKLSDQPVMEASFP 198
Query: 190 RVLCTKLGSDSTDDAPIF---------------------------TEGDSGFCVDITSTK 222
V + D D+ +F TE D + V + TK
Sbjct: 199 NVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKRNERFYTEKDPSYFVFLYLTK 258
Query: 223 DGKFITVNSNSRASSEEGLCD------------------------RCDQSISENEECSSG 258
D +F+T+N ++ +SE L D R D+
Sbjct: 259 DSRFLTLNIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGMLYYVEHRDDELYILTNVGEPT 318
Query: 259 DYYLARCRAEKLYSANWQNIILPGEDISLQDMDIFDGHLVLFVSKKGVPMLCSIDLS 315
++ L R A+ NW + + D+D+F H VLF+ + + I L+
Sbjct: 319 EFKLMRTAADAPAIMNWDLFFTMKRNTKVVDLDMFKDHCVLFLKHSNLLYVNVIGLA 375
>sp|Q5RAK4|PPCEL_PONAB Prolyl endopeptidase-like OS=Pongo abelii GN=PREPL PE=2 SV=2
Length = 727
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 83/237 (35%), Gaps = 57/237 (24%)
Query: 134 EILLDWNEIAEKYGYVHVGTCRVSPDHNFLAYTIDTSGDEQFMLQIKDLRNQCIV----P 189
E+L + E+ K + RV+PD ++A I T E I L +Q ++ P
Sbjct: 143 EVLFNLEEL--KLDQPFIDCIRVAPDEKYVAAKIRTEDSEASTCVIIKLSDQPVMEASFP 200
Query: 190 RVLCTKLGSDSTDDAPIF---------------------------TEGDSGFCVDITSTK 222
V + D D+ +F TE D + V + TK
Sbjct: 201 NVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKRNERFYTEKDPSYFVFLYLTK 260
Query: 223 DGKFITVNSNSRASSEEGLCD------------------------RCDQSISENEECSSG 258
D +F+T+N ++ +SE L D R D+
Sbjct: 261 DSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVLYYVEHRDDELYILTNVGEPT 320
Query: 259 DYYLARCRAEKLYSANWQNIILPGEDISLQDMDIFDGHLVLFVSKKGVPMLCSIDLS 315
++ L R A+ NW + + D+D+F H VLF+ + + I L+
Sbjct: 321 EFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKDHCVLFLKHSNLLYVNVIGLA 377
>sp|A5LFV8|PPCEL_MACFA Prolyl endopeptidase-like OS=Macaca fascicularis GN=PREPL PE=2 SV=1
Length = 727
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 83/237 (35%), Gaps = 57/237 (24%)
Query: 134 EILLDWNEIAEKYGYVHVGTCRVSPDHNFLAYTIDTSGDEQFMLQIKDLRNQCIV----P 189
E+L + E+ K + RV+PD ++A I T E I L +Q ++ P
Sbjct: 143 EVLFNLEEL--KLDQPFIDCIRVAPDEKYVAAKIRTEDSEASTCVIIKLSDQPVMEASFP 200
Query: 190 RVLCTKLGSDSTDDAPIF---------------------------TEGDSGFCVDITSTK 222
V + D D+ +F TE D + V + TK
Sbjct: 201 NVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKRNERFYTEKDPSYFVFLYLTK 260
Query: 223 DGKFITVNSNSRASSEEGLCD------------------------RCDQSISENEECSSG 258
D +F+T+N ++ +SE L D R D+
Sbjct: 261 DSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVLYYVEHRDDELYILTNVGEPT 320
Query: 259 DYYLARCRAEKLYSANWQNIILPGEDISLQDMDIFDGHLVLFVSKKGVPMLCSIDLS 315
++ L R A+ NW + + D+D+F H VLF+ + + I L+
Sbjct: 321 EFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKDHCVLFLKHSNLLYVNVIGLA 377
>sp|Q4J6C6|PPCEL_HUMAN Prolyl endopeptidase-like OS=Homo sapiens GN=PREPL PE=1 SV=1
Length = 727
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 83/237 (35%), Gaps = 57/237 (24%)
Query: 134 EILLDWNEIAEKYGYVHVGTCRVSPDHNFLAYTIDTSGDEQFMLQIKDLRNQCIV----P 189
E+L + E+ K + RV+PD ++A I T E I L +Q ++ P
Sbjct: 143 EVLFNLEEL--KLDQPFIDCIRVAPDEKYVAAKIRTEDSEASTCVIIKLSDQPVMEASFP 200
Query: 190 RVLCTKLGSDSTDDAPIF---------------------------TEGDSGFCVDITSTK 222
V + D D+ +F TE D + V + TK
Sbjct: 201 NVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKRNERFYTEKDPSYFVFLYLTK 260
Query: 223 DGKFITVNSNSRASSEEGLCD------------------------RCDQSISENEECSSG 258
D +F+T+N ++ +SE L D R D+
Sbjct: 261 DSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVLYYVEHRDDELYILTNVGEPT 320
Query: 259 DYYLARCRAEKLYSANWQNIILPGEDISLQDMDIFDGHLVLFVSKKGVPMLCSIDLS 315
++ L R A+ NW + + D+D+F H VLF+ + + I L+
Sbjct: 321 EFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKDHCVLFLKHSNLLYVNVIGLA 377
>sp|Q5HZA6|PPCEL_RAT Prolyl endopeptidase-like OS=Rattus norvegicus GN=Prepl PE=2 SV=2
Length = 726
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 24/141 (17%)
Query: 199 DSTDDAPIFTEGDSGFCVDITSTKDGKFITVNSNSRASSEEGLCD--------------- 243
D+ + +TE D + V + TKD +F+T+N ++ +SE L D
Sbjct: 236 DNKRNERFYTEKDPSYFVFLYLTKDSRFLTLNIMNKTTSEVWLIDGLSPWDPPMLIQKRI 295
Query: 244 ---------RCDQSISENEECSSGDYYLARCRAEKLYSANWQNIILPGEDISLQDMDIFD 294
R D+ ++ L R A+ NW + + D+D+F
Sbjct: 296 HGMLYYVEHRDDELYILTNVGEPTEFKLMRTAADAPAIMNWDLFFTMKRNTKVVDLDMFK 355
Query: 295 GHLVLFVSKKGVPMLCSIDLS 315
H VLF+ + + I L+
Sbjct: 356 DHCVLFLKHSNLLYVNVIGLA 376
>sp|Q474K8|TOLB_CUPPJ Protein TolB OS=Cupriavidus pinatubonensis (strain JMP134 / LMG
1197) GN=tolB PE=3 SV=1
Length = 450
Score = 35.8 bits (81), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 9/54 (16%)
Query: 155 RVSPDHNFLAYTIDTSGDEQFMLQIKDLRNQCIVPRVLCTKLGSDSTDDAPIFT 208
R+SPD +LAY + G F LQ++DL N + T L S D+AP F
Sbjct: 358 RISPDGKYLAYITRSGG---FKLQLQDLTNGDV------TSLTDTSNDEAPSFA 402
>sp|Q801P0|LMO4B_XENLA LIM domain transcription factor LMO4-B OS=Xenopus laevis GN=lmo4-b
PE=2 SV=1
Length = 171
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 18/103 (17%)
Query: 221 TKDGKFITVNSNSRASSEEGLCDRCDQSISENEEC--SSGDYYLARCRAEKLYSANWQNI 278
TK G + N R G C+ C QSI +E + G Y +C A +N
Sbjct: 67 TKSGMILCRNDYIRLFGNSGACNACGQSIPASEMVMRAQGSVYHLKC----FTCATCRNR 122
Query: 279 ILPGEDISLQDMDIF----------DGHLVLFVSK--KGVPML 309
++PG+ + IF +GHL S +G PML
Sbjct: 123 LVPGDRFHYVNGTIFCEHDRPTGLLNGHLNPLQSNPLQGSPML 165
>sp|Q8AW92|LMO4A_XENLA LIM domain transcription factor LMO4-A OS=Xenopus laevis GN=lmo4-a
PE=2 SV=1
Length = 171
Score = 32.0 bits (71), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 18/103 (17%)
Query: 221 TKDGKFITVNSNSRASSEEGLCDRCDQSISENEEC--SSGDYYLARCRAEKLYSANWQNI 278
TK G + N R G C+ C QSI +E + G Y +C A +N
Sbjct: 67 TKSGMILCRNDYIRLFGNSGACNACGQSIPASEMVMRAQGSVYHLKC----FTCATCRNR 122
Query: 279 ILPGEDISLQDMDIF----------DGHLVLFVSK--KGVPML 309
++PG+ + IF +GHL S +G PML
Sbjct: 123 LVPGDRFHYVNGTIFCEHDRPTGLLNGHLNPLQSNPLQGSPML 165
>sp|P27028|PPCE_FLAME Prolyl endopeptidase OS=Flavobacterium meningosepticum GN=f1pep1
PE=1 SV=1
Length = 705
Score = 32.0 bits (71), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 70/185 (37%), Gaps = 29/185 (15%)
Query: 14 PVPKKIPYEASAHGLTWQDPYHWMKNTNDPDFINHLNHENSYAQASMSDTQTLQRTLFSE 73
P KK+ + + G DPY W+++ D + E + Q ++ Q +
Sbjct: 29 PETKKVSHTDTYFGTQVSDPYRWLEDDRAEDTKAWVQQEVKFTQDYLA-----QIPFRDQ 83
Query: 74 MKNRMP-----SKISTPPERWGPWLYYQYIPEGKEYPLLCRRLETEKSGWLQTVFHNVRG 128
+K ++ KIS P ++ G + Y+ + +L R+
Sbjct: 84 LKKQLMDIWNYEKISAPFKK-GKYTYFSKNDGLQAQSVLYRKDAA--------------- 127
Query: 129 GFGKEEILLDWNEIAEKYGYVHVGTCRVSPDHNFLAYTIDTSGDEQFMLQIKDLRNQCIV 188
GK E+ LD N+ +EK G + + + +AY+I G + + I D + +
Sbjct: 128 --GKTEVFLDPNKFSEK-GTTSLASVSFNKKGTLVAYSISEGGSDWNKIIILDAETKKQL 184
Query: 189 PRVLC 193
L
Sbjct: 185 DETLL 189
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,598,290
Number of Sequences: 539616
Number of extensions: 6433479
Number of successful extensions: 15907
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 15879
Number of HSP's gapped (non-prelim): 26
length of query: 365
length of database: 191,569,459
effective HSP length: 119
effective length of query: 246
effective length of database: 127,355,155
effective search space: 31329368130
effective search space used: 31329368130
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)