BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040509
(226 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255557729|ref|XP_002519894.1| transporter, putative [Ricinus communis]
gi|223540940|gb|EEF42498.1| transporter, putative [Ricinus communis]
Length = 507
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/177 (57%), Positives = 125/177 (70%), Gaps = 9/177 (5%)
Query: 4 IVGAIRSIQESSTKFWYGVVKLYTLS--EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVV 61
+ G ++QE+ F V ++ +AFG+ DVWVAVGWSSDVLP KRMSN+AVVV
Sbjct: 296 VHGGKSAVQENLALFGKQVRLFDSMHYLKAFGVGDVWVAVGWSSDVLPVAKRMSNIAVVV 355
Query: 62 PKSGASLWADLWAIPAASRL--HKTNWRASQWSISIDPSMDRIL-----LPFKQEVIPGT 114
PKSG+SLWADLWAIPAASRL ++ R S I ++ L +PFKQEVIPG
Sbjct: 356 PKSGSSLWADLWAIPAASRLATNRIGGRVRGPSPLIHQWIEFCLQAARAMPFKQEVIPGA 415
Query: 115 SPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFLEPLSEATFDVLRWL 171
SPSALE+T V++PEEL +GKP L T+LIAGVPP EIL+RCEFLEPLS+A +WL
Sbjct: 416 SPSALESTPVEVPEELTRGKPRLDTNLIAGVPPPEILSRCEFLEPLSDAQLLDYKWL 472
>gi|147822062|emb|CAN68081.1| hypothetical protein VITISV_021806 [Vitis vinifera]
Length = 875
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 118/180 (65%), Gaps = 8/180 (4%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNW--- 86
+A + DVWVAVGWSSDVLPA KRMSNVAV+VPKSGASLWADLWAIP+ S+L ++
Sbjct: 693 KALSVGDVWVAVGWSSDVLPAAKRMSNVAVIVPKSGASLWADLWAIPSTSKLERSRQIGG 752
Query: 87 RASQWSISIDPSMDRIL-----LPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDL 141
R S I ++ L PF +EVIPG SPSA+E V+ P EL KGKP L T+L
Sbjct: 753 RVRGPSPVIHQWIEFCLQAARAFPFTEEVIPGASPSAIECASVEAPRELTKGKPKLETNL 812
Query: 142 IAGVPPAEILARCEFLEPLSEATFDVLRWLKFLRFYEKRKMILCLNKVVANLAEFEKKDH 201
IAG+PP EILA CEFLEPLS+AT R L +I L++ + +L EF ++ +
Sbjct: 813 IAGMPPPEILAHCEFLEPLSDATLSDYRGLIAGIQKPSHGLIHGLHRYILSLKEFFQQSY 872
>gi|225427562|ref|XP_002266662.1| PREDICTED: uncharacterized protein LOC100242504 [Vitis vinifera]
gi|296085502|emb|CBI29234.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 118/180 (65%), Gaps = 8/180 (4%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNW--- 86
+A + DVWVAVGWSSDVLPA KRMSNVAV+VPKSGASLWADLWAIP+ S+L ++
Sbjct: 371 KALSVGDVWVAVGWSSDVLPAAKRMSNVAVIVPKSGASLWADLWAIPSTSKLERSRQIGG 430
Query: 87 RASQWSISIDPSMDRIL-----LPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDL 141
R S I ++ L PF +EVIPG SPSA+E V+ P EL KGKP L T+L
Sbjct: 431 RVRGPSPVIHQWIEFCLQAARAFPFTEEVIPGASPSAIECASVEAPRELTKGKPKLETNL 490
Query: 142 IAGVPPAEILARCEFLEPLSEATFDVLRWLKFLRFYEKRKMILCLNKVVANLAEFEKKDH 201
IAG+PP EILA CEFLEPLS+AT R L +I L++ + +L EF ++ +
Sbjct: 491 IAGMPPPEILAHCEFLEPLSDATLSDYRGLIAGIQKPSHGLIHGLHRYILSLKEFFQQSY 550
>gi|449455671|ref|XP_004145575.1| PREDICTED: uncharacterized protein LOC101211357 [Cucumis sativus]
gi|449485058|ref|XP_004157059.1| PREDICTED: uncharacterized protein LOC101230567 [Cucumis sativus]
Length = 549
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 123/186 (66%), Gaps = 12/186 (6%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRA- 88
+AF + DVWVAVGWSSDVLP VKRMSN+AVVVPKSG+SLWADLWAIPA SR+
Sbjct: 363 KAFAVGDVWVAVGWSSDVLPVVKRMSNIAVVVPKSGSSLWADLWAIPATSRIETEPIGGR 422
Query: 89 --------SQWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTD 140
QW I R LPFKQEV+PG SP+A+E +V +P+EL +GKP L T+
Sbjct: 423 VRGPSPLFHQW-IEFCLQTARA-LPFKQEVVPGASPAAIEGPVV-VPKELFEGKPKLDTN 479
Query: 141 LIAGVPPAEILARCEFLEPLSEATFDVLRWLKFLRFYEKRKMILCLNKVVANLAEFEKKD 200
LI GVPP++IL +CEFL+PLS++T RWL + +++ +++ V++L F +
Sbjct: 480 LIGGVPPSDILEKCEFLQPLSDSTLADYRWLAANMQKPEHRLMDRVHQAVSSLVRFVSQI 539
Query: 201 HGANAT 206
N+T
Sbjct: 540 SLKNST 545
>gi|224074577|ref|XP_002304393.1| predicted protein [Populus trichocarpa]
gi|222841825|gb|EEE79372.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 124/185 (67%), Gaps = 9/185 (4%)
Query: 25 LYTLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL--H 82
+Y L + F + D WVAVGWSSDVLP KRMSNVAVVVPKSG SLWADLWAIPAA++L +
Sbjct: 237 MYYL-KTFSMGDAWVAVGWSSDVLPIAKRMSNVAVVVPKSGTSLWADLWAIPAATKLETN 295
Query: 83 KTNWRASQWSISIDPSMDRIL-----LPFKQEVIPGTSPSALETTLVKLPEELLKGKPSL 137
+ R S I ++ L LPFKQEVIPG +PSA+E +++++P+EL KGKP L
Sbjct: 296 QIGGRIRGPSPLIHQWIEFCLQAARALPFKQEVIPGATPSAIENSVIEVPKELTKGKPKL 355
Query: 138 GTDLIAGVPPAEILARCEFLEPLSEATFDVLRWL-KFLRFYEKRKMILCLNKVVANLAEF 196
T+LIAGVPP EIL +CEFLEPL +AT + L + ++ + + + +++ + F
Sbjct: 356 DTNLIAGVPPPEILTKCEFLEPLPDATLSDYKLLIRTMQIPDPGLIHRIQHYILSTIHTF 415
Query: 197 EKKDH 201
K H
Sbjct: 416 RLKQH 420
>gi|356559069|ref|XP_003547824.1| PREDICTED: uncharacterized protein LOC100781794 [Glycine max]
Length = 552
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/159 (56%), Positives = 108/159 (67%), Gaps = 10/159 (6%)
Query: 23 VKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
V+L+ S +AFG+ DVWVAVGWSSD++PA KRMSNVAVVVPKSGASLWADLWAIPAAS
Sbjct: 360 VRLFDSSNYLKAFGVGDVWVAVGWSSDIIPAAKRMSNVAVVVPKSGASLWADLWAIPAAS 419
Query: 80 RL--HKTNWRASQWSISIDPSMDRIL-----LPFKQEVIPGTSPSALETTLVKLPEELLK 132
R+ ++ R S I ++ L LPFKQEVIPG SPS L+ +P EL K
Sbjct: 420 RIQTNRIGGRIRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPSHLQGHSANVPVELTK 479
Query: 133 GKPSLGTDLIAGVPPAEILARCEFLEPLSEATFDVLRWL 171
G P L +L+ G PP +IL +CEFLEPLS +T WL
Sbjct: 480 GGPRLNGNLVDGAPPPDILEKCEFLEPLSNSTLSDYHWL 518
>gi|356560607|ref|XP_003548582.1| PREDICTED: uncharacterized protein LOC100809061 [Glycine max]
Length = 508
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 106/159 (66%), Gaps = 10/159 (6%)
Query: 23 VKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
V+L+ S +AFG+ D WVAVGWSSD++PA KRMSNVAVVVPKSG SLWADLWAIPAAS
Sbjct: 316 VRLFDSSNYLKAFGVGDAWVAVGWSSDIIPAAKRMSNVAVVVPKSGVSLWADLWAIPAAS 375
Query: 80 RL--HKTNWRASQWSISIDPSMDRIL-----LPFKQEVIPGTSPSALETTLVKLPEELLK 132
R+ ++ R S I ++ L LPFKQEVIPG SPS L+ +P EL K
Sbjct: 376 RIQTNRIGGRIRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPSHLQGHSANVPVELTK 435
Query: 133 GKPSLGTDLIAGVPPAEILARCEFLEPLSEATFDVLRWL 171
G P + +L+ G PP +IL RCEFLEPLS +T WL
Sbjct: 436 GGPRINGNLVDGAPPPDILERCEFLEPLSNSTLSDYHWL 474
>gi|115460340|ref|NP_001053770.1| Os04g0602200 [Oryza sativa Japonica Group]
gi|113565341|dbj|BAF15684.1| Os04g0602200, partial [Oryza sativa Japonica Group]
Length = 367
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 128/206 (62%), Gaps = 11/206 (5%)
Query: 4 IVGAIRSIQESSTKFWYGVVKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVV 60
I G ++ ES T+ V+L+ + ++FG+ DVWVAVGWSSDV+PA KRMS+VAVV
Sbjct: 162 ITGGRETVLESLTQL-QNQVQLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAVV 220
Query: 61 VPKSGASLWADLWAIPAASRLH--KTNWRASQWSISIDPSMDRIL-----LPFKQEVIPG 113
VPKSG+SLWADLWAIP+A++ + R S I+ D L LPF+Q+VIPG
Sbjct: 221 VPKSGSSLWADLWAIPSATKFQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIPG 280
Query: 114 TSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFLEPLSEATFDVLRWLKF 173
SP LE + ++P+E K KP L T+L+ G PP EIL +CEFLEPLSE D +WL
Sbjct: 281 ASPLFLEKPVPEVPQERNKRKPKLETNLVRGAPPLEILEKCEFLEPLSEKALDDYQWLIT 340
Query: 174 LRFYEKRKMILCLNKVVANLAEFEKK 199
R + L + ++++ F+ +
Sbjct: 341 RMQRPNRGLFGNLLQNISSVLNFKSR 366
>gi|116310926|emb|CAH67864.1| B0403H10-OSIGBa0105A11.16 [Oryza sativa Indica Group]
Length = 537
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 128/206 (62%), Gaps = 11/206 (5%)
Query: 4 IVGAIRSIQESSTKFWYGVVKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVV 60
I G ++ ES T+ V+L+ + ++FG+ DVWVAVGWSSDV+PA KRMS+VAVV
Sbjct: 332 ITGGRETVLESLTQL-QNQVQLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAVV 390
Query: 61 VPKSGASLWADLWAIPAASRLH--KTNWRASQWSISIDPSMDRIL-----LPFKQEVIPG 113
VPKSG+SLWADLWAIP+A++ + R S I+ D L LPF+Q+VIPG
Sbjct: 391 VPKSGSSLWADLWAIPSATKFQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIPG 450
Query: 114 TSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFLEPLSEATFDVLRWLKF 173
SP LE + ++P+E K KP L T+L+ G PP EIL +CEFLEPLSE D +WL
Sbjct: 451 ASPLFLEKPVPEVPQERNKRKPKLETNLVRGAPPLEILEKCEFLEPLSEKALDDYQWLIT 510
Query: 174 LRFYEKRKMILCLNKVVANLAEFEKK 199
R + L + ++++ F+ +
Sbjct: 511 RMQRPNRGLFGNLLQNISSVLNFKSR 536
>gi|218195504|gb|EEC77931.1| hypothetical protein OsI_17268 [Oryza sativa Indica Group]
gi|222629488|gb|EEE61620.1| hypothetical protein OsJ_16044 [Oryza sativa Japonica Group]
Length = 537
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 128/206 (62%), Gaps = 11/206 (5%)
Query: 4 IVGAIRSIQESSTKFWYGVVKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVV 60
I G ++ ES T+ V+L+ + ++FG+ DVWVAVGWSSDV+PA KRMS+VAVV
Sbjct: 332 ITGGRETVLESLTQL-QNQVQLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAVV 390
Query: 61 VPKSGASLWADLWAIPAASRLH--KTNWRASQWSISIDPSMDRIL-----LPFKQEVIPG 113
VPKSG+SLWADLWAIP+A++ + R S I+ D L LPF+Q+VIPG
Sbjct: 391 VPKSGSSLWADLWAIPSATKFQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIPG 450
Query: 114 TSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFLEPLSEATFDVLRWLKF 173
SP LE + ++P+E K KP L T+L+ G PP EIL +CEFLEPLSE D +WL
Sbjct: 451 ASPLFLEKPVPEVPQERNKRKPKLETNLVRGAPPLEILEKCEFLEPLSEKALDDYQWLIT 510
Query: 174 LRFYEKRKMILCLNKVVANLAEFEKK 199
R + L + ++++ F+ +
Sbjct: 511 RMQRPNRGLFGNLLQNISSVLNFKSR 536
>gi|38344144|emb|CAE01823.2| OSJNBa0041A02.11 [Oryza sativa Japonica Group]
Length = 422
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 128/206 (62%), Gaps = 11/206 (5%)
Query: 4 IVGAIRSIQESSTKFWYGVVKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVV 60
I G ++ ES T+ V+L+ + ++FG+ DVWVAVGWSSDV+PA KRMS+VAVV
Sbjct: 217 ITGGRETVLESLTQL-QNQVQLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAVV 275
Query: 61 VPKSGASLWADLWAIPAASRLH--KTNWRASQWSISIDPSMDRIL-----LPFKQEVIPG 113
VPKSG+SLWADLWAIP+A++ + R S I+ D L LPF+Q+VIPG
Sbjct: 276 VPKSGSSLWADLWAIPSATKFQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIPG 335
Query: 114 TSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFLEPLSEATFDVLRWLKF 173
SP LE + ++P+E K KP L T+L+ G PP EIL +CEFLEPLSE D +WL
Sbjct: 336 ASPLFLEKPVPEVPQERNKRKPKLETNLVRGAPPLEILEKCEFLEPLSEKALDDYQWLIT 395
Query: 174 LRFYEKRKMILCLNKVVANLAEFEKK 199
R + L + ++++ F+ +
Sbjct: 396 RMQRPNRGLFGNLLQNISSVLNFKSR 421
>gi|357517389|ref|XP_003628983.1| RING-H2 finger protein ATL5F [Medicago truncatula]
gi|355523005|gb|AET03459.1| RING-H2 finger protein ATL5F [Medicago truncatula]
Length = 786
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/149 (56%), Positives = 100/149 (67%), Gaps = 7/149 (4%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLH--KTNWR 87
+AFG+ DVWVAVGWSSD++P KRMSNVAV+VPKSGASLWADLWAIPAAS++ + R
Sbjct: 370 KAFGVGDVWVAVGWSSDIIPVAKRMSNVAVIVPKSGASLWADLWAIPAASKIQTSRIGGR 429
Query: 88 ASQWSISIDPSMDRIL-----LPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLI 142
S I ++ L LPFKQEVIPG SP L+ + EL KG+P L T+LI
Sbjct: 430 VRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPPLLQGHSTNVALELTKGRPRLVTNLI 489
Query: 143 AGVPPAEILARCEFLEPLSEATFDVLRWL 171
G PP +IL RCEFLEPLS + WL
Sbjct: 490 DGAPPPDILERCEFLEPLSNSAVSDYHWL 518
>gi|226510377|ref|NP_001146059.1| uncharacterized protein LOC100279590 [Zea mays]
gi|219885513|gb|ACL53131.1| unknown [Zea mays]
gi|413919418|gb|AFW59350.1| putative putrescine-binding domain family protein [Zea mays]
Length = 530
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/149 (55%), Positives = 103/149 (69%), Gaps = 7/149 (4%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLH--KTNWR 87
++F + DVWVAVGWSSDV+PA KRMSNVAVVVPKSG+SLWADLWAIP A+R + R
Sbjct: 353 KSFSVGDVWVAVGWSSDVIPAAKRMSNVAVVVPKSGSSLWADLWAIPCATRFQTDQIGSR 412
Query: 88 ASQWSISIDPSMDRIL-----LPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLI 142
A S + D L LPF+Q+VIPG SP LE+ + ++P++ K KP L T+L+
Sbjct: 413 ARGPSPLVHQWFDFCLQSARSLPFRQDVIPGASPLHLESPVPEVPQDKNKRKPKLDTNLV 472
Query: 143 AGVPPAEILARCEFLEPLSEATFDVLRWL 171
GVPP EIL RCEFLEPLS + +WL
Sbjct: 473 RGVPPPEILERCEFLEPLSGKALEDYQWL 501
>gi|357165613|ref|XP_003580439.1| PREDICTED: uncharacterized protein LOC100830894 [Brachypodium
distachyon]
Length = 526
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/149 (55%), Positives = 100/149 (67%), Gaps = 7/149 (4%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLH--KTNWR 87
++FG+ DVWV VGWSSDV+PA KRMSNVAVVVPKSG+SLWADLWAIP A+R + R
Sbjct: 349 KSFGVGDVWVTVGWSSDVIPAAKRMSNVAVVVPKSGSSLWADLWAIPCATRFQTDRIGGR 408
Query: 88 ASQWSISIDPSMDRIL-----LPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLI 142
S I D L LPF+QE+IPG SP LE ++P+++ K KP L T+L+
Sbjct: 409 TRGPSPLIHQWFDFCLQSARSLPFRQEIIPGASPLFLENPAPEVPQDVNKRKPKLETNLV 468
Query: 143 AGVPPAEILARCEFLEPLSEATFDVLRWL 171
GVPP EIL RCEFLEPL + +WL
Sbjct: 469 RGVPPPEILERCEFLEPLPDKVLGDYQWL 497
>gi|242077052|ref|XP_002448462.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor]
gi|241939645|gb|EES12790.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor]
Length = 531
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/149 (55%), Positives = 101/149 (67%), Gaps = 7/149 (4%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLH--KTNWR 87
++F + DVWVAVGWSSDV+PA KRMSNVAVVVPKSG+S+WADLWAIP A+R + R
Sbjct: 354 KSFSVGDVWVAVGWSSDVIPAAKRMSNVAVVVPKSGSSIWADLWAIPCATRFQTDQIGSR 413
Query: 88 ASQWSISIDPSMDRIL-----LPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLI 142
S I D L LPF+Q+VIPG SP LE + ++P++ K KP L T+L+
Sbjct: 414 TRGPSPLIHQWFDFCLQSARSLPFRQDVIPGASPLYLENPVPEVPQDKNKRKPKLETNLV 473
Query: 143 AGVPPAEILARCEFLEPLSEATFDVLRWL 171
GVPP EIL RCEFLEPLS + +WL
Sbjct: 474 RGVPPPEILERCEFLEPLSGKALEDYQWL 502
>gi|12322546|gb|AAG51275.1|AC027135_16 hypothetical protein [Arabidopsis thaliana]
Length = 526
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 100/154 (64%), Gaps = 15/154 (9%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS---------- 79
+AF + DVWV VGWSSDV+P KRMSNV V+VPKSGA+LWADLWAIPA S
Sbjct: 336 KAFNVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWADLWAIPAVSDSGKEAEQRG 395
Query: 80 -RLHKTNWRASQW-SISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSL 137
R+ + +QW + P+ LPF +EVIPG SPSAL+ LV PE+ K + L
Sbjct: 396 GRVRGPSPLINQWIEFCLQPARS---LPFTREVIPGASPSALDGPLVTEPEKTKKDRTKL 452
Query: 138 GTDLIAGVPPAEILARCEFLEPLSEATFDVLRWL 171
T+L+ GVPP EIL++CEFLEPL EAT R L
Sbjct: 453 DTNLVTGVPPPEILSKCEFLEPLPEATLSEYRLL 486
>gi|28393765|gb|AAO42292.1| unknown protein [Arabidopsis thaliana]
Length = 524
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 100/154 (64%), Gaps = 15/154 (9%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS---------- 79
+AF + DVWV VGWSSDV+P KRMSNV V+VPKSGA+LWADLWAIPA S
Sbjct: 334 KAFNVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWADLWAIPAVSDSGKEAEQRG 393
Query: 80 -RLHKTNWRASQW-SISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSL 137
R+ + +QW + P+ LPF +EVIPG SPSAL+ LV PE+ K + L
Sbjct: 394 GRVRGPSPLINQWIEFCLQPARS---LPFTREVIPGASPSALDGPLVTEPEKTKKDRTKL 450
Query: 138 GTDLIAGVPPAEILARCEFLEPLSEATFDVLRWL 171
T+L+ GVPP EIL++CEFLEPL EAT R L
Sbjct: 451 DTNLVTGVPPPEILSKCEFLEPLPEATLSEYRLL 484
>gi|30692516|ref|NP_174426.2| putrescine-binding periplasmic protein-like protein [Arabidopsis
thaliana]
gi|51536594|gb|AAU05535.1| At1g31410 [Arabidopsis thaliana]
gi|332193231|gb|AEE31352.1| putrescine-binding periplasmic protein-like protein [Arabidopsis
thaliana]
Length = 524
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 100/154 (64%), Gaps = 15/154 (9%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS---------- 79
+AF + DVWV VGWSSDV+P KRMSNV V+VPKSGA+LWADLWAIPA S
Sbjct: 334 KAFNVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWADLWAIPAVSDSGKEAEQRG 393
Query: 80 -RLHKTNWRASQW-SISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSL 137
R+ + +QW + P+ LPF +EVIPG SPSAL+ LV PE+ K + L
Sbjct: 394 GRVRGPSPLINQWIEFCLQPARS---LPFTREVIPGASPSALDGPLVTEPEKTKKDRTKL 450
Query: 138 GTDLIAGVPPAEILARCEFLEPLSEATFDVLRWL 171
T+L+ GVPP EIL++CEFLEPL EAT R L
Sbjct: 451 DTNLVTGVPPPEILSKCEFLEPLPEATLSEYRLL 484
>gi|326516630|dbj|BAJ92470.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518394|dbj|BAJ88226.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519014|dbj|BAJ92667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520335|dbj|BAK07426.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326524998|dbj|BAK04435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/149 (54%), Positives = 99/149 (66%), Gaps = 7/149 (4%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLH--KTNWR 87
++FG+ DVWV VGWSSDV+PA KRMSNVAVVVPKSG+SLWADLWAIP A+R + R
Sbjct: 354 KSFGVGDVWVTVGWSSDVIPAAKRMSNVAVVVPKSGSSLWADLWAIPCATRFQTDRIGGR 413
Query: 88 ASQWSISIDPSMDRIL-----LPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLI 142
S I D L LPF+QE+IPG SP LE +P++ K +P L T+L+
Sbjct: 414 TRGPSPLIHQWFDFCLQSARSLPFRQEIIPGASPLFLEHPAPDVPQDRNKKQPKLETNLV 473
Query: 143 AGVPPAEILARCEFLEPLSEATFDVLRWL 171
GVPP EIL +CEFLEPLS+ +WL
Sbjct: 474 RGVPPPEILEKCEFLEPLSDKAVGDYQWL 502
>gi|297846532|ref|XP_002891147.1| hypothetical protein ARALYDRAFT_473635 [Arabidopsis lyrata subsp.
lyrata]
gi|297336989|gb|EFH67406.1| hypothetical protein ARALYDRAFT_473635 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 100/154 (64%), Gaps = 15/154 (9%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS---------- 79
+AF + DVWV VGWSSDV+P KRMSNV V+VPKSGA+LWADLWAIPA S
Sbjct: 333 KAFNVGDVWVTVGWSSDVIPVAKRMSNVTVIVPKSGATLWADLWAIPAVSDSGKEAEQIG 392
Query: 80 -RLHKTNWRASQW-SISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSL 137
R+ + +QW + P+ LPF +EVIPG SPSAL+ LV+ PE+ K + L
Sbjct: 393 GRVRGPSPLINQWIEFCLQPARS---LPFTREVIPGASPSALDGPLVREPEKTKKDRTKL 449
Query: 138 GTDLIAGVPPAEILARCEFLEPLSEATFDVLRWL 171
T+L+ GVP EIL++CEFLEPL EAT R L
Sbjct: 450 DTNLVTGVPLPEILSKCEFLEPLPEATLLEYRLL 483
>gi|302818713|ref|XP_002991029.1| hypothetical protein SELMODRAFT_132900 [Selaginella moellendorffii]
gi|300141123|gb|EFJ07837.1| hypothetical protein SELMODRAFT_132900 [Selaginella moellendorffii]
Length = 387
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 82/151 (54%), Gaps = 15/151 (9%)
Query: 31 AFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS---------RL 81
A G DVW+AVGWS+DVLP KR SNV V+ P SG SLWAD+WAIPAA+ R+
Sbjct: 238 ALGAGDVWIAVGWSNDVLPFAKRQSNVGVIAPASGTSLWADVWAIPAATTIKSDKAGGRI 297
Query: 82 HKTNWRASQW-SISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTD 140
+ SQW + P+ L F QE G SP E P L T+
Sbjct: 298 RGPSPLVSQWLEFCLQPARS---LAFHQEAFCGASPLRFADVADNGSSE--PAGPRLDTN 352
Query: 141 LIAGVPPAEILARCEFLEPLSEATFDVLRWL 171
L++G+PP +IL + EFLEPL E T RWL
Sbjct: 353 LVSGLPPKDILGKSEFLEPLEEETLAKYRWL 383
>gi|302820071|ref|XP_002991704.1| hypothetical protein SELMODRAFT_133925 [Selaginella moellendorffii]
gi|300140553|gb|EFJ07275.1| hypothetical protein SELMODRAFT_133925 [Selaginella moellendorffii]
Length = 387
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 31 AFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA---------SRL 81
A G DVW+AVGWS+DVLP KR SNV V+ P SG SLWAD+WAIPAA R+
Sbjct: 238 ALGAGDVWIAVGWSNDVLPFAKRQSNVGVIAPASGTSLWADVWAIPAAIKIKSDKAGGRI 297
Query: 82 HKTNWRASQW-SISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTD 140
+ SQW + P+ L F QE G SP E P L T+
Sbjct: 298 RGPSPLVSQWLEFCLQPARS---LAFHQEAFCGASPLRFADVADNGSSE--PAGPRLDTN 352
Query: 141 LIAGVPPAEILARCEFLEPLSEATFDVLRWL 171
L++G+PP +IL + EFLEPL E T RWL
Sbjct: 353 LVSGLPPKDILGKSEFLEPLEEETLAKYRWL 383
>gi|168015953|ref|XP_001760514.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688211|gb|EDQ74589.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 438
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 85/163 (52%), Gaps = 21/163 (12%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKT---NW 86
+A DVWVAVGWSSD++P KR SN++V P+SG SLWADLWAIPA + K
Sbjct: 240 KAMSAGDVWVAVGWSSDIIPYSKRASNISVYAPESGTSLWADLWAIPATTTFEKAENVGG 299
Query: 87 RASQWSISIDPSMDRILLP-----FKQEVIPGTSP---------SALETTLVKLPEELLK 132
R S + +D L P F +V G SP E T ++
Sbjct: 300 RVRGPSPLVFQWLDFCLQPARATTFANDVFVGASPLTWSEKSETEISENTFLETGASQSG 359
Query: 133 GKP----SLGTDLIAGVPPAEILARCEFLEPLSEATFDVLRWL 171
KP +L ++++ G+PP EI+A+ EFLEPLS+ +WL
Sbjct: 360 KKPKTVVTLDSNIVQGMPPDEIVAKSEFLEPLSDKALSDYQWL 402
>gi|428223996|ref|YP_007108093.1| extracellular solute-binding protein [Geitlerinema sp. PCC 7407]
gi|427983897|gb|AFY65041.1| extracellular solute-binding protein family 1 [Geitlerinema sp. PCC
7407]
Length = 388
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 82/171 (47%), Gaps = 32/171 (18%)
Query: 1 MKGIVGAIRSIQESSTKFWYGVVKLYTLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVV 60
+ G+V RS+ + KF+ L E + D W AVGWS+DVLP ++ ++AVV
Sbjct: 227 VTGLVEEARSLHQQ-VKFYNSTAYL----EPLLLGDTWAAVGWSTDVLPLLESQRHLAVV 281
Query: 61 VPKSGASLWADLW---AIPAASRLHK--TNWRASQWSISIDPS---MDRILLPFKQEVIP 112
VP+SG +LWAD+W A PA+ + W W+ +I + R + P +
Sbjct: 282 VPQSGTALWADVWVQAAAPASEAVQDLMNEWIDFCWNPAIAGQFSLVSRAVSPIVPSLDR 341
Query: 113 GTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFLEPLSEA 163
T P +L+ + L PP E+L RCEFLEPL EA
Sbjct: 342 STLPQSLQDNSILL-------------------PPPEVLERCEFLEPLPEA 373
>gi|113476419|ref|YP_722480.1| periplasmic polyamine-binding protein of ABC transporter
[Trichodesmium erythraeum IMS101]
gi|110167467|gb|ABG52007.1| periplasmic polyamine-binding protein of ABC transporter
[Trichodesmium erythraeum IMS101]
Length = 382
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 21/149 (14%)
Query: 23 VKLYTLSEAFG---IRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
VK Y+ + I D W+AVGWS+D+LP +K+ +A VVP+SG +LWA+LW PAAS
Sbjct: 234 VKFYSSNNYLQPLIIGDTWLAVGWSNDILPLLKKRKKIAAVVPQSGTALWANLWVKPAAS 293
Query: 80 RLHK--TNWRASQWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSL 137
+ W W + M I+ ++P +P+ L + + P LL
Sbjct: 294 PENSLTEKWINFCWQPQVAQQMS-IITQTSSPIMPKINPNELISDIKNNPLLLL------ 346
Query: 138 GTDLIAGVPPAEILARCEFLEPLSEATFD 166
P EI+ + EFL PL+ +T +
Sbjct: 347 ---------PQEIIEKSEFLAPLANSTIE 366
>gi|224139138|ref|XP_002326777.1| predicted protein [Populus trichocarpa]
gi|222834099|gb|EEE72576.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 63/112 (56%), Gaps = 15/112 (13%)
Query: 48 LPAVKRMSNVAVVVPKSGASLWADLWA--------IPAASRLHKTNWRASQWSISIDPSM 99
P KRMSNVAVV P +G SLWADL + I + ++L +W I I
Sbjct: 3 FPLPKRMSNVAVVSPNTGTSLWADLQSQLPRDLKLIRSGAKLEDHPSLIHEW-IEIRLQA 61
Query: 100 DRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEIL 151
R LPFKQEVIPG +PS + +P+EL K KP LGT+LIA V P +I
Sbjct: 62 ARA-LPFKQEVIPGATPSD-----IGVPKELAKCKPKLGTNLIAEVHPPDIF 107
>gi|16331125|ref|NP_441853.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|383322868|ref|YP_005383721.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|383326037|ref|YP_005386890.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|383491921|ref|YP_005409597.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|384437189|ref|YP_005651913.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|451815282|ref|YP_007451734.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|1653619|dbj|BAA18531.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|339274221|dbj|BAK50708.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|359272187|dbj|BAL29706.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|359275357|dbj|BAL32875.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|359278527|dbj|BAL36044.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|407961501|dbj|BAM54741.1| spermidine/putrescine-binding periplasmicprotein [Bacillus subtilis
BEST7613]
gi|451781251|gb|AGF52220.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
Length = 384
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 22/171 (12%)
Query: 2 KGIVGAIRSIQESSTKFWYGVVKLYTLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVV 61
K + ++QE +T+ + K Y +A +DVW+AVGWS+ ++P ++ S + V+
Sbjct: 228 KAVNALPSALQELATQVKFYNSKYYL--QALLNKDVWLAVGWSNQIIPLLRNQSELRAVI 285
Query: 62 PKSGASLWADLWAIPAASRLHKTNWRASQW-SISIDPSMDRILLPFKQEVIPGTSPSALE 120
P SG SLWADLW +PA + + +W + S PS + F +AL
Sbjct: 286 PSSGTSLWADLWTMPAEMEAAEITY---EWLNFSAQPSSLEQMATFS---------NALA 333
Query: 121 TTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFLEPLSEATFDVLRWL 171
L L P L+A P E+L RCEFL PL AT + + L
Sbjct: 334 VPYQNLEVSALSTNP-----LLAFSP--ELLERCEFLAPLDIATVNQYKQL 377
>gi|428304513|ref|YP_007141338.1| extracellular solute-binding protein [Crinalium epipsammum PCC
9333]
gi|428246048|gb|AFZ11828.1| extracellular solute-binding protein family 1 [Crinalium epipsammum
PCC 9333]
Length = 391
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 23/167 (13%)
Query: 8 IRSIQESSTKFWYGVVKLY---TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKS 64
I++++++ K + VKLY T + + D W+AVGWS+DVL A+K +A VVP+S
Sbjct: 224 IKNLKDALKKL-HQNVKLYSSDTYLQPLILGDTWLAVGWSTDVLKAIKSEPKIAAVVPQS 282
Query: 65 GASLWADLWAIPAASRLHKT------NWRASQW-SISIDPSMDRILLPFKQEVIPGTSPS 117
G +LWAD+W P + + T A QW P + F + V SP
Sbjct: 283 GTALWADVWVRPKLASANSTSDTPNLQTLADQWIDFCWQPKSASAISIFTEAV----SPV 338
Query: 118 ALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFLEPLSEAT 164
+ +P++L+K + L P +I+ + EFL PLS+AT
Sbjct: 339 LINMDGNDIPKDLVKNQLLL--------PNKQIIQKSEFLHPLSKAT 377
>gi|209522903|ref|ZP_03271460.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|376001837|ref|ZP_09779691.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|423062300|ref|ZP_17051090.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
gi|209496490|gb|EDZ96788.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|375329748|emb|CCE15444.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|406716208|gb|EKD11359.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
Length = 371
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 29/155 (18%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTN------WRAS 89
D W+AVGWS D+ P V+R N+A+ +PKSG +LW+D+W P A+ TN W
Sbjct: 238 DTWLAVGWSGDISPQVQRQHNIAIAIPKSGTALWSDVWVKPIAT--SATNNPLVQAWIDF 295
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAE 149
W I M + TSP + LP++ L+ P L +P +
Sbjct: 296 CWQPEIATQMSLL--------TGATSPIVWGMSRADLPKD-LRENPQL-------LPDTD 339
Query: 150 ILARCEFLEPLSEATFDVLRWLKFLRFYEKRKMIL 184
IL R EFL PL+ A+ ++ R +++ + ++
Sbjct: 340 ILERSEFLLPLTVASMQ-----QYQRLWQQIRSVV 369
>gi|428207943|ref|YP_007092296.1| extracellular solute-binding protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428009864|gb|AFY88427.1| extracellular solute-binding protein family 1 [Chroococcidiopsis
thermalis PCC 7203]
Length = 398
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 20/143 (13%)
Query: 23 VKLY---TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
VKLY T + + D W+AVGWS+D++P ++R +A ++P+SG SLWADLWA P +
Sbjct: 244 VKLYSSDTYLQPLILGDTWLAVGWSNDIIPVMQRHRQIAAIIPQSGTSLWADLWANPIQA 303
Query: 80 RLHKTNWRASQW-SISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLG 138
+ QW P + R +L F + SP + + EL +P L
Sbjct: 304 NSDRA--LEYQWIDFCWQPQIARQILLFGRT----NSPIPFQIDPENIQAEL---RPLL- 353
Query: 139 TDLIAGVPPAEILARCEFLEPLS 161
VP IL + EFL PL+
Sbjct: 354 ------VPNDNILDKSEFLRPLT 370
>gi|443313248|ref|ZP_21042860.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 7509]
gi|442776653|gb|ELR86934.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 7509]
Length = 383
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 18/150 (12%)
Query: 20 YGVVKLYT---LSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
+ VK Y+ E + D W+AVGWSSDV+P ++R +A +VP+SG+++WAD+W P
Sbjct: 238 HQQVKFYSSDRYMEPLILGDTWLAVGWSSDVIPVIQRYQEIAAIVPQSGSAIWADVWVSP 297
Query: 77 AASRLHKTNWRASQWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPS 136
S ++K A QW +D LP Q+ I S + + P ++ +G +
Sbjct: 298 TKSPVNKL--LAKQW-------IDFCWLPQSQKQISILSKALSPIEIDINPTDVQEGLRN 348
Query: 137 LGTDLIAGVPPAEILARCEFLEPLSEATFD 166
L L+ +E A+ EFL PL + T
Sbjct: 349 L---LLVK---SETFAQSEFLLPLPKETMQ 372
>gi|409993345|ref|ZP_11276490.1| periplasmic polyamine-binding protein of ABC transporter
[Arthrospira platensis str. Paraca]
gi|291567216|dbj|BAI89488.1| putative ABC transporter substrate-binding protein [Arthrospira
platensis NIES-39]
gi|409935824|gb|EKN77343.1| periplasmic polyamine-binding protein of ABC transporter
[Arthrospira platensis str. Paraca]
Length = 389
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 65/136 (47%), Gaps = 24/136 (17%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTN------WRAS 89
D W+AVGWS D+ P ++R N+A+ +PKSG +LW+D+W P A+ TN W
Sbjct: 256 DTWLAVGWSGDISPQLQRQHNIAIAIPKSGTALWSDVWVKPKAT--SATNNPLVQAWIDF 313
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAE 149
W I M + TSP LP++ L+ P L +P +
Sbjct: 314 CWQPEIATQMSLL--------TGATSPIVWGMPRADLPKD-LRENPQL-------LPDTD 357
Query: 150 ILARCEFLEPLSEATF 165
IL R EFL PL+ A+
Sbjct: 358 ILDRSEFLLPLTVASM 373
>gi|434391078|ref|YP_007126025.1| periplasmic polyamine-binding protein of ABC transporter
[Gloeocapsa sp. PCC 7428]
gi|428262919|gb|AFZ28865.1| periplasmic polyamine-binding protein of ABC transporter
[Gloeocapsa sp. PCC 7428]
Length = 378
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 6/75 (8%)
Query: 20 YGVVKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
+ V+LY+ + E I D WVAVGWS+DVLP ++R +AVVVP+SG +LWAD+W P
Sbjct: 234 HQQVRLYSSNRYIEPLIIGDTWVAVGWSTDVLPILRRYREIAVVVPRSGTALWADVWVNP 293
Query: 77 AASRLHKTNWRASQW 91
+ L ASQW
Sbjct: 294 INAALPTL---ASQW 305
>gi|434397206|ref|YP_007131210.1| extracellular solute-binding protein family 1 [Stanieria
cyanosphaera PCC 7437]
gi|428268303|gb|AFZ34244.1| extracellular solute-binding protein family 1 [Stanieria
cyanosphaera PCC 7437]
Length = 383
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Query: 20 YGVVKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
+ +K Y+ E I D W+AVGWS+D+LP KR SN+ VVP+SG S+WADLW P
Sbjct: 235 HQQIKFYSSDHYLEPLIIGDTWLAVGWSTDILPLSKRYSNLGFVVPQSGTSIWADLWVQP 294
Query: 77 AASRLHKTNW-RASQW 91
RL ++N+ SQW
Sbjct: 295 ---RLAESNFGELSQW 307
>gi|443657684|ref|ZP_21131934.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Microcystis aeruginosa DIANCHI905]
gi|159027984|emb|CAO87944.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333157|gb|ELS47731.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Microcystis aeruginosa DIANCHI905]
Length = 382
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
DVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P L N QW
Sbjct: 254 DVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPV---LTTPNSLVQQWIDFC 310
Query: 95 IDP-SMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILAR 153
P S +I L G SP L L ++P + +K P L V P E + +
Sbjct: 311 WQPESATKISL-----FTSGLSPLILTENLDQIPPD-IKNNPLL-------VNP-EAVKK 356
Query: 154 CEFLEPLSEAT 164
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|428220899|ref|YP_007105069.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 7502]
gi|427994239|gb|AFY72934.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 7502]
Length = 357
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 34 IRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
I D W+AVGWS D++ ++ S++ VV+P G +LW+DLW P + W
Sbjct: 227 IGDSWLAVGWSQDIVNTAEQNSDIKVVIPAEGTALWSDLWVFPQRVNRPENQIFGQDW-- 284
Query: 94 SIDPSMDRILLP-FKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILA 152
+D L P ++ T +A L KLP+ + T I PP +ILA
Sbjct: 285 -----LDLCLTPAIANQITALTDATATNPDLGKLPKSV--------TSNILKFPPDQILA 331
Query: 153 RCEFLEPLSEAT 164
+ E + PLSE +
Sbjct: 332 KSELILPLSETS 343
>gi|17227795|ref|NP_484343.1| periplasmic polyamine-binding protein of ABC transporter [Nostoc
sp. PCC 7120]
gi|17135277|dbj|BAB77823.1| periplasmic polyamine-binding protein of ABC transporter [Nostoc
sp. PCC 7120]
Length = 388
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 74/147 (50%), Gaps = 22/147 (14%)
Query: 23 VKLY---TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
VK+Y T E + D W+AVGWSSD++P + R ++VV+P+SG S+WADLW P +
Sbjct: 247 VKIYSSNTYLEPLILGDTWLAVGWSSDLIPVLARYPQLSVVIPRSGTSIWADLWVSPKET 306
Query: 80 RLHKTNWRASQW-SISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLG 138
+ +SQW + P++ R + + SP A + E SLG
Sbjct: 307 ---AKDGLSSQWIDFCLQPNIARQIALLTKT----NSPVATNIGTADIQE-------SLG 352
Query: 139 TDLIAGVPPAEILARCEFLEPLS-EAT 164
+ E+ A+ EFL PLS EAT
Sbjct: 353 GLFLNS---QEVFAKGEFLLPLSPEAT 376
>gi|425443832|ref|ZP_18823896.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9443]
gi|389733602|emb|CCI02643.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9443]
Length = 382
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
DVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P L N QW
Sbjct: 254 DVWLSVGWSNDILPVGDRYNKIKVVVPKSGTSLWSDVWVKPV---LTTPNSLVQQWIDFC 310
Query: 95 IDP-SMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILAR 153
P S ++I L G SP L ++P + +K P L V P E + +
Sbjct: 311 WQPESANKISL-----FTSGLSPLVLTENPDQIPSD-IKNNPLL-------VNP-EAIKK 356
Query: 154 CEFLEPLSEAT 164
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|428778824|ref|YP_007170610.1| spermidine/putrescine-binding periplasmic protein [Dactylococcopsis
salina PCC 8305]
gi|428693103|gb|AFZ49253.1| spermidine/putrescine-binding periplasmic protein [Dactylococcopsis
salina PCC 8305]
Length = 369
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 34 IRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-S 92
+ D WVAVGWS+D+L R ++ ++P+SG +LWADLW P + + QW
Sbjct: 238 LEDTWVAVGWSNDLLQLRTRYPDIKTIIPRSGTALWADLWVNPTGN--EAISEAILQWID 295
Query: 93 ISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILA 152
++P + F +SP + K+P+ SLG D I P +E+L
Sbjct: 296 FCLNPKAANQIGIFTN----ASSPIFINANRDKIPK-------SLGEDKIKN-PSSEVLE 343
Query: 153 RCEFLEPLSEAT 164
+ EFL PLS T
Sbjct: 344 KSEFLLPLSPKT 355
>gi|119490051|ref|ZP_01622675.1| periplasmic polyamine-binding protein of ABC transporter [Lyngbya
sp. PCC 8106]
gi|119454203|gb|EAW35355.1| periplasmic polyamine-binding protein of ABC transporter [Lyngbya
sp. PCC 8106]
Length = 357
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 71/150 (47%), Gaps = 22/150 (14%)
Query: 23 VKLY---TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
+KLY T + D W+AVGWS+D R N+ VV+P SG +LWAD+W P +
Sbjct: 206 IKLYDSNTYLKPLITGDTWLAVGWSTDFSEKFCRQHNIGVVIPTSGTALWADVWVQPTSE 265
Query: 80 RLHKTNWRASQWSISIDPSMDRILLP---FKQEVIPG-TSPSALETTLVKLPEELLKGKP 135
+ A QW +D P + ++ G TSP + +LP E L+ P
Sbjct: 266 KPISNLPLAQQW-------IDFCWKPEIATQMSILTGTTSPIVNQLQPSELP-ETLQNNP 317
Query: 136 SLGTDLIAGVPPAEILARCEFLEPLSEATF 165
L P AEIL + EFL PL E+T
Sbjct: 318 LL-------FPKAEILEQSEFLLPLPESTL 340
>gi|425456329|ref|ZP_18836040.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9807]
gi|389802604|emb|CCI18362.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9807]
Length = 382
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 66/131 (50%), Gaps = 19/131 (14%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
DVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P L N QW
Sbjct: 254 DVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPV---LTTPNSLVEQWIDFC 310
Query: 95 IDP-SMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILAR 153
P S +I L G SP L ++P + +K P L V P E + +
Sbjct: 311 WQPESATKISL-----FTSGLSPLVLTENPDQIPSD-IKNNPLL-------VNP-EAIKK 356
Query: 154 CEFLEPLSEAT 164
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|428769711|ref|YP_007161501.1| periplasmic polyamine-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428683990|gb|AFZ53457.1| periplasmic polyamine-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 380
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 26/133 (19%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP--AASRLHKT-NWRASQWS 92
D W+AVGWS+D++P ++R N+ V+P SG SLWAD+W P +S L K NW W
Sbjct: 261 DTWLAVGWSTDIIPLIERYHNIKAVIPLSGTSLWADIWVKPRNQSSELEKIYNWIDFCWQ 320
Query: 93 ISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILA 152
S +I L G SP +ET + ++ P E+LA
Sbjct: 321 ---SKSARQISL-----FSSGISP--VETNFSETNRQIPLMSP-------------EVLA 357
Query: 153 RCEFLEPLSEATF 165
+ EF+EPL F
Sbjct: 358 KSEFIEPLESQFF 370
>gi|428775058|ref|YP_007166845.1| periplasmic polyamine-binding protein [Halothece sp. PCC 7418]
gi|428689337|gb|AFZ42631.1| periplasmic polyamine-binding protein [Halothece sp. PCC 7418]
Length = 372
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 42/161 (26%)
Query: 20 YGVVKLYTLSEAF----GIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 75
+ VK Y+ S+A+ + D WVAVGWSSD+L R ++ V+P+SG SLWAD+W
Sbjct: 221 HQQVKFYS-SQAYLQPLVLEDTWVAVGWSSDILQLQTRYPDLTTVIPESGTSLWADVWVQ 279
Query: 76 PAASRLHKTNWRASQWSISIDPSMDRILLPF------KQEVIP------GTSPSALETTL 123
P PS+ +L + +Q +SP L T
Sbjct: 280 PTGK-----------------PSLSEAMLQWINFCWEEQAATQIGLFTNASSPILLNTKT 322
Query: 124 VKLPEELLKGKPSLGTDLIAGVPPAEILARCEFLEPLSEAT 164
+LPE L + + +PP ++ + EFL PLS T
Sbjct: 323 DQLPESLQQDQ--------LRIPPQTLIEKSEFLLPLSAQT 355
>gi|425459716|ref|ZP_18839202.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9808]
gi|389827779|emb|CCI20808.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9808]
Length = 382
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
DVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P L N QW
Sbjct: 254 DVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPV---LTTPNSLVQQWIDFC 310
Query: 95 IDP-SMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILAR 153
P S ++I L G SP L ++P + ++ P L V P E + +
Sbjct: 311 WQPESANKISL-----FTSGLSPLILTENPDQIPPD-IRNNPLL-------VNP-EAVKK 356
Query: 154 CEFLEPLSEAT 164
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|440756421|ref|ZP_20935622.1| twin-arginine translocation pathway signal sequence domain protein
[Microcystis aeruginosa TAIHU98]
gi|440173643|gb|ELP53101.1| twin-arginine translocation pathway signal sequence domain protein
[Microcystis aeruginosa TAIHU98]
Length = 382
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
DVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P L N QW
Sbjct: 254 DVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPV---LTTPNSLVQQWIDFC 310
Query: 95 IDP-SMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILAR 153
P S ++I L G SP L ++P + ++ P L V P E + +
Sbjct: 311 WQPESANKISL-----FTSGLSPLILTENPDQIPPD-IRNNPLL-------VNP-EAVKK 356
Query: 154 CEFLEPLSEAT 164
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|425434255|ref|ZP_18814726.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9432]
gi|389676326|emb|CCH94643.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9432]
Length = 382
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
DVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P L N QW
Sbjct: 254 DVWLSVGWSNDILPVSDRHNKIKVVVPKSGTSLWSDVWVKPV---LTTPNSLVQQWIDFC 310
Query: 95 IDP-SMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILAR 153
P S ++I L G SP L ++P + ++ P L V P E + +
Sbjct: 311 WQPESANKISL-----FTSGLSPLILTENPDQIPPD-IRNNPLL-------VNP-EAVKK 356
Query: 154 CEFLEPLSEAT 164
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|425451461|ref|ZP_18831282.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
7941]
gi|389767205|emb|CCI07314.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
7941]
Length = 392
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
DVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P L N QW
Sbjct: 254 DVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPV---LTTPNSLVEQWIDFC 310
Query: 95 IDP-SMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILAR 153
P S ++I L G SP L ++P + ++ P L V P E + +
Sbjct: 311 WQPESANKISL-----FTSGLSPLILTENPDQIPPD-IRNNPLL-------VNP-EAVKK 356
Query: 154 CEFLEPLSEAT 164
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|75909270|ref|YP_323566.1| periplasmic polyamine-binding protein of ABC transporter [Anabaena
variabilis ATCC 29413]
gi|75702995|gb|ABA22671.1| periplasmic polyamine-binding protein of ABC transporter [Anabaena
variabilis ATCC 29413]
Length = 388
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 23 VKLY---TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
VK Y T E I D W+AVGWSSDV+P + R +++V+P+SG S+WADLW P
Sbjct: 247 VKFYSSNTYLEPLIIGDTWLAVGWSSDVIPVLARYPQLSLVIPRSGTSIWADLWVSPKEI 306
Query: 80 RLHKTNWRASQW-SISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLG 138
+SQW + P++ R + + SP + E SLG
Sbjct: 307 TQDAL---SSQWIDFCLQPNIARQIALLTKT----NSPVVTNIGTADIQE-------SLG 352
Query: 139 TDLIAGVPPAEILARCEFLEPL-SEAT 164
+ L+ E+ A+ EFL PL EAT
Sbjct: 353 SLLLNS---QEVFAKGEFLLPLPPEAT 376
>gi|282899638|ref|ZP_06307602.1| periplasmic polyamine-binding protein of ABC transporter
[Cylindrospermopsis raciborskii CS-505]
gi|281195517|gb|EFA70450.1| periplasmic polyamine-binding protein of ABC transporter
[Cylindrospermopsis raciborskii CS-505]
Length = 394
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 17/129 (13%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL-HKTNWRASQW-SI 93
D W+AVGWS+D++P + R + V+P+SG ++WADLW PA + + +T+ SQW
Sbjct: 263 DTWLAVGWSNDIIPILSRYPQLRAVIPQSGTAIWADLWVQPANTLMTEETDNLISQWIDF 322
Query: 94 SIDPSM-DRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILA 152
P + +I++ K +P+ + T+ V+ + ++ +L+A E+L
Sbjct: 323 CWQPDIAGQIVMLGKT-----NTPTFINTSKVQGISDSIQ-------NLLA--IEQELLE 368
Query: 153 RCEFLEPLS 161
+CEFL+PLS
Sbjct: 369 KCEFLKPLS 377
>gi|384250495|gb|EIE23974.1| periplasmic binding protein-like II, partial [Coccomyxa
subellipsoidea C-169]
Length = 310
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRA 88
+A G +DVW VGWS D++PA +R +V +V P SG SLWAD+WA+P+ ++ H + R
Sbjct: 222 KALGAKDVWAVVGWSGDLVPAAERSGDVVLVAPASGTSLWADMWAVPSHAQ-HGSRMRG 279
>gi|172036028|ref|YP_001802529.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51142]
gi|354552834|ref|ZP_08972141.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51472]
gi|171697482|gb|ACB50463.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51142]
gi|353554664|gb|EHC24053.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51472]
Length = 390
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 14/131 (10%)
Query: 34 IRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR-LHKTNWRASQW- 91
+ DVWV+VGWS++++P V + N+ VVP SG S+W+D+W P A +K + A QW
Sbjct: 253 VGDVWVSVGWSNEIIPLVTKNRNIKAVVPTSGTSIWSDVWVKPKAKESQNKLSETAKQWL 312
Query: 92 SISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEIL 151
+ P +++ F SP +L E++ P L D PA I
Sbjct: 313 NFCWQPQAAKLISLFAD----AASPMIDRIDKKELSSEVI-NNPLLFID------PA-IF 360
Query: 152 ARCEFLEPLSE 162
+CEFL+PLS+
Sbjct: 361 EQCEFLQPLSK 371
>gi|284929800|ref|YP_003422322.1| spermidine/putrescine-binding periplasmic protein [cyanobacterium
UCYN-A]
gi|284810244|gb|ADB95941.1| spermidine/putrescine-binding periplasmic protein [cyanobacterium
UCYN-A]
Length = 385
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 13/127 (10%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
+VW +VGWS+D++P + R N+ V+P SG SLW+D+W P + + + A +W +
Sbjct: 253 EVWASVGWSNDIIPILSRNRNIKAVIPSSGTSLWSDIWVAPKNNNISTLSEIAQRWINFC 312
Query: 95 IDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARC 154
+P M ++ F +SP +L E+ + L+ P I +C
Sbjct: 313 WEPEMVNLISLFTN----ASSPMINNLNNKQLFPEV------INNPLLCLQP--SIFNKC 360
Query: 155 EFLEPLS 161
+F+EPLS
Sbjct: 361 DFIEPLS 367
>gi|422303925|ref|ZP_16391274.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9806]
gi|389791060|emb|CCI13120.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9806]
Length = 382
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 67/132 (50%), Gaps = 21/132 (15%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
DVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P L N QW I+
Sbjct: 254 DVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPV---LTTPNSLVDQW-INF 309
Query: 96 ---DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILA 152
S +I L G SP L ++P + +K P L V P E +
Sbjct: 310 CWQSESATKISL-----FTSGLSPLILTQNPDQIPPD-IKNNPLL-------VNP-EAVK 355
Query: 153 RCEFLEPLSEAT 164
+ +FL PLS AT
Sbjct: 356 KSDFLNPLSPAT 367
>gi|282898041|ref|ZP_06306036.1| periplasmic polyamine-binding protein of ABC transporter
[Raphidiopsis brookii D9]
gi|281197185|gb|EFA72086.1| periplasmic polyamine-binding protein of ABC transporter
[Raphidiopsis brookii D9]
Length = 275
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 17/130 (13%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS---QW- 91
D W+AVGWS+D++P + R + V+P+SG ++WAD+W PA + + +T+ + QW
Sbjct: 142 DTWLAVGWSNDIIPILSRYPQLRAVIPQSGTAIWADIWVQPANTLITETDKTDNLILQWI 201
Query: 92 SISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEIL 151
P + R ++ + +P+ + T+ V+ G +L+ V E+L
Sbjct: 202 DFCWQPDIARQIVMLGK----TNTPTFVNTSKVQ-------GISDDTQNLL--VIEHELL 248
Query: 152 ARCEFLEPLS 161
+CEFL+PLS
Sbjct: 249 EKCEFLKPLS 258
>gi|443329204|ref|ZP_21057792.1| spermidine/putrescine-binding periplasmic protein [Xenococcus sp.
PCC 7305]
gi|442791149|gb|ELS00648.1| spermidine/putrescine-binding periplasmic protein [Xenococcus sp.
PCC 7305]
Length = 393
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 13 ESSTKFWYGVVKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSN-VAVVVPKSGASL 68
ES + VK Y+ + + + D+W AVGWS+D+LP V+R + + +VVP SG SL
Sbjct: 227 ESELATLHQQVKFYSSTKYLQPLALGDLWAAVGWSTDILPLVRRYPDKIGMVVPASGTSL 286
Query: 69 WADLWAIPA--ASRLHKTNWRASQW-SISIDPSMDRILLPFKQEVIPGTSPSALETTLVK 125
WADLW P S + R + W S L+ F G SP + V+
Sbjct: 287 WADLWVQPTVDGSIGDRVERRLASWIDFCWQDSSASTLMLFTN----GISPILNQENQVE 342
Query: 126 LPEELLKGKPSLGTDLIAGVPPAEILARCEFLEPLS 161
L +EL + + + L ++ + +F+EPL+
Sbjct: 343 LTKELKNNQDFIQSSL-------KLFSNSDFIEPLT 371
>gi|425472395|ref|ZP_18851246.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9701]
gi|389881535|emb|CCI37923.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9701]
Length = 382
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
DVWV+VGWS+D+LP R + + VVVPKSG SLW+D+W P L N QW
Sbjct: 254 DVWVSVGWSNDILPVSNRYNKIKVVVPKSGTSLWSDVWVKPV---LTTPNSLVQQW---- 306
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
+D P I + L + P+++ P + + + P E + + +
Sbjct: 307 ---IDFCWQPESATKISLFTSGLSPLILTENPDQI---SPDIRNNPLLVNP--EAVKKSD 358
Query: 156 FLEPLSEAT 164
FL PLS AT
Sbjct: 359 FLNPLSPAT 367
>gi|425439720|ref|ZP_18820036.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9717]
gi|389720001|emb|CCH96242.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9717]
Length = 382
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 23 VKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
VK Y+ + + DVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P
Sbjct: 238 VKFYSYQYYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPV-- 295
Query: 80 RLHKTNWRASQWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGT 139
L N QW +D P I + L + P+++ P +
Sbjct: 296 -LTTPNSLVEQW-------IDFCWQPESATKISLFTSGLSPLILTQNPDQI---SPDIRN 344
Query: 140 DLIAGVPPAEILARCEFLEPLSEAT 164
+ + P E + + +FL PLS AT
Sbjct: 345 NPLLVNP--EAIKKSDFLNPLSPAT 367
>gi|428774536|ref|YP_007166324.1| extracellular solute-binding protein [Cyanobacterium stanieri PCC
7202]
gi|428688815|gb|AFZ48675.1| extracellular solute-binding protein family 1 [Cyanobacterium
stanieri PCC 7202]
Length = 378
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
D W+AVGWS+D+LP +++ N+ V+P+SG SLWAD+W P + L +
Sbjct: 256 DTWLAVGWSTDILPVLEQHRNIRAVIPESGTSLWADIWVQPYENNLSE 303
>gi|428311092|ref|YP_007122069.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
gi|428252704|gb|AFZ18663.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
Length = 432
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 25/160 (15%)
Query: 20 YGVVKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
+ VK Y+ + E + D W+A+GWS+DVL + +VP SG +LWAD+W P
Sbjct: 262 HQQVKYYSSNQYLEPLLLGDTWLALGWSTDVLSVQSGYRQIDSIVPLSGTALWADVWVQP 321
Query: 77 A--ASRLHKTNWRAS---QWSISIDPSMDRILLPFKQEVIPGT---------SPSALETT 122
A A+R + AS Q S++ + + + F + +P SP +
Sbjct: 322 APIAARSNTVKTSASSTPQQDSSVNMPLTKQWIEFCWKPLPAQQISVLSHAASPMFADVE 381
Query: 123 LVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFLEPLSE 162
KLP+ L + + L+ VP +++L +CEFLEPL +
Sbjct: 382 PTKLPKTLRENR------LL--VPDSKVLKKCEFLEPLPQ 413
>gi|257060659|ref|YP_003138547.1| hypothetical protein Cyan8802_2862 [Cyanothece sp. PCC 8802]
gi|256590825|gb|ACV01712.1| conserved hypothetical protein [Cyanothece sp. PCC 8802]
Length = 391
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 26/134 (19%)
Query: 34 IRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA-------SRLHKTNW 86
+ D W++VGWSSD++P V N+ VVP SG +LW+D+W P S L K W
Sbjct: 256 VGDAWLSVGWSSDIIPLVNSNRNIKAVVPASGTALWSDVWVNPKVKQGDTKLSELTK-QW 314
Query: 87 RASQWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVP 146
W D ++++I L + G SP + +LP E +K P L D
Sbjct: 315 LDFCWQ---DQAVNQICL-----LTDGVSPMIYQAK--ELPSE-VKDNPLLFID------ 357
Query: 147 PAEILARCEFLEPL 160
I+ +C+F+EPL
Sbjct: 358 -QRIMDKCDFIEPL 370
>gi|218248017|ref|YP_002373388.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 8801]
gi|218168495|gb|ACK67232.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 8801]
Length = 391
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 26/134 (19%)
Query: 34 IRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA-------SRLHKTNW 86
+ D W++VGWSSD++P V N+ VVP SG +LW+D+W P S L K W
Sbjct: 256 VGDAWLSVGWSSDIIPLVNSNRNIKAVVPASGTALWSDVWVNPKVKQGETKLSELTK-QW 314
Query: 87 RASQWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVP 146
W D ++++I L + G SP + +LP E +K P L D
Sbjct: 315 LDFCWQ---DQAVNQICL-----LTDGVSPMIYQAK--ELPSE-VKDNPLLFID------ 357
Query: 147 PAEILARCEFLEPL 160
I+ +C+F+EPL
Sbjct: 358 -QRIMDKCDFIEPL 370
>gi|332706228|ref|ZP_08426297.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
gi|332355065|gb|EGJ34536.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
Length = 396
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 63/141 (44%), Gaps = 28/141 (19%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKT----------- 84
D WVAVGWS+D+L R + VVP+SG +LW+D+W P +
Sbjct: 258 DTWVAVGWSTDILALRTRDRQIEAVVPQSGTALWSDVWVKPVSVSSASDSSESNSESDLS 317
Query: 85 -NWRASQWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIA 143
W W S +I L + SP L+ KLP+++ L
Sbjct: 318 KKWIEFCWD---SKSAKQISL-----LTNAASPILLKIPRNKLPQDI--------QTLPL 361
Query: 144 GVPPAEILARCEFLEPLSEAT 164
+P AEIL +CEFL PL E+T
Sbjct: 362 LLPEAEILNKCEFLHPLPEST 382
>gi|166363771|ref|YP_001656044.1| periplasmic polyamine-binding protein [Microcystis aeruginosa
NIES-843]
gi|166086144|dbj|BAG00852.1| periplasmic polyamine-binding protein [Microcystis aeruginosa
NIES-843]
Length = 382
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
DVW++VGWS+D+LP R + + VVVPKSG SLW+D+W P L N QW
Sbjct: 254 DVWLSVGWSNDILPVSDRYNKIKVVVPKSGTSLWSDVWVKPV---LTTPNSLVEQW---- 306
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
+D P I + L + P+++ P + + + P E + + +
Sbjct: 307 ---IDFCWQPESATKISLFTSGLSPLILTQNPDQI---SPDIRNNPLLVNP--EAIKKSD 358
Query: 156 FLEPLSEAT 164
FL PLS AT
Sbjct: 359 FLNPLSPAT 367
>gi|170076941|ref|YP_001733579.1| periplasmic binding protein of ABC transporter [Synechococcus sp.
PCC 7002]
gi|169884610|gb|ACA98323.1| periplasmic binding protein of ABC transporter [Synechococcus sp.
PCC 7002]
Length = 377
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 13 ESSTKFWYGVVKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLW 69
ES + + VK Y+ + + + D W+A GWS D+LP ++R N+ V+P SG +LW
Sbjct: 224 ESDFQTLHRQVKFYSSTHYLQPLNMGDTWIAQGWSQDILPLLQRYRNLGAVIPASGTALW 283
Query: 70 ADLWAIPAASR 80
DLW P S+
Sbjct: 284 CDLWVQPQRSQ 294
>gi|425467732|ref|ZP_18847011.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9809]
gi|389829411|emb|CCI29285.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9809]
Length = 382
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
DVW++VGWS+D+LP R + VVVPKSG SLW+D+W P L N QW
Sbjct: 254 DVWLSVGWSNDILPVSDRYKKIKVVVPKSGTSLWSDVWVKPV---LTTPNSLVEQWIDFC 310
Query: 95 IDP-SMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILAR 153
P S +I L G SP L + P+++ P + + + P E + +
Sbjct: 311 WQPESATKISL-----FTSGLSP----LILTQNPDQI---SPDIRNNPLLVNP--EAIKK 356
Query: 154 CEFLEPLSEAT 164
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|428204536|ref|YP_007083125.1| spermidine/putrescine-binding periplasmic protein [Pleurocapsa sp.
PCC 7327]
gi|427981968|gb|AFY79568.1| spermidine/putrescine-binding periplasmic protein [Pleurocapsa sp.
PCC 7327]
Length = 399
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 20/130 (15%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D W+AVGWSSD+L +R + V+P+SG SLWAD+W PA+ + +T+ R S I
Sbjct: 255 DTWLAVGWSSDILALTERYRTIKAVIPRSGTSLWADIWVQPAS--VQETSDRTSLLKQWI 312
Query: 96 D-----PSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEI 150
D S ++I L SP L +L +++ K L + P +I
Sbjct: 313 DFCWQTQSANQISL-----FTNAASPIVLNLKADELSKDIRKNPLLL-------IEP-QI 359
Query: 151 LARCEFLEPL 160
L +CEFL PL
Sbjct: 360 LDKCEFLYPL 369
>gi|220909337|ref|YP_002484648.1| ABC transporter periplasmic solute-binding protein [Cyanothece sp.
PCC 7425]
gi|219865948|gb|ACL46287.1| ABC transporter, periplasmic solute-binding protein [Cyanothece sp.
PCC 7425]
Length = 377
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 77
D W AVGWS+DVLP ++R + V+VP+SG +LWAD+W PA
Sbjct: 247 DTWAAVGWSTDVLPLMRRNDKIGVIVPRSGTALWADVWVRPA 288
>gi|414075874|ref|YP_006995192.1| solute-binding protein [Anabaena sp. 90]
gi|413969290|gb|AFW93379.1| solute-binding protein [Anabaena sp. 90]
Length = 376
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
D W+AVGWS D++P + R A VVP+SG ++W DLW P + A QW
Sbjct: 250 DTWLAVGWSHDIIPVISRYQKFAAVVPQSGTAIWTDLWVSPTGV---SNDGLAYQWLDFC 306
Query: 95 IDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARC 154
+ P+ + + + P + L +L LL TD AEILA+
Sbjct: 307 LQPNTSKQIALLTKSNSPVDNAMVLGDIQKQLQNLLL-------TD-------AEILAKS 352
Query: 155 EFLEPLSEA 163
EF+ PL A
Sbjct: 353 EFILPLPPA 361
>gi|67921536|ref|ZP_00515054.1| Twin-arginine translocation pathway signal [Crocosphaera watsonii
WH 8501]
gi|416384741|ref|ZP_11684684.1| periplasmic polyamine-binding protein of ABC transporter
[Crocosphaera watsonii WH 0003]
gi|67856648|gb|EAM51889.1| Twin-arginine translocation pathway signal [Crocosphaera watsonii
WH 8501]
gi|357264996|gb|EHJ13812.1| periplasmic polyamine-binding protein of ABC transporter
[Crocosphaera watsonii WH 0003]
Length = 387
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 34 IRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLH-KTNWRASQW- 91
+ DVWV+VGWS++++P + + N+ VVP SG ++W+D+W P A + + A QW
Sbjct: 253 VGDVWVSVGWSNEIIPLMAKSPNIKAVVPTSGTAIWSDIWVKPKAKETETELSEIAKQWL 312
Query: 92 SISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEIL 151
+ P R++ F P + T E + P L D + I
Sbjct: 313 NFCWQPQAARLMSLFADAASP-----VINTIDKDELEPDITNNPLLFID-------SAIF 360
Query: 152 ARCEFLEPLSEAT 164
+C+FLEPLS+ +
Sbjct: 361 DKCDFLEPLSKQS 373
>gi|440681216|ref|YP_007156011.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
gi|428678335|gb|AFZ57101.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
Length = 383
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 63/149 (42%), Gaps = 29/149 (19%)
Query: 23 VKLY---TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA- 78
VK Y T E D W+AVGWS+DV+P + R + V+P+SG ++WADLW PA
Sbjct: 240 VKFYDSTTYLEPLITGDTWLAVGWSNDVIPLLSRYPKLTAVIPQSGTAIWADLWVSPAGV 299
Query: 79 -SRLHKTNWRASQWSISIDPS---MDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGK 134
R + W W +I + + P + ++ LE L+ P
Sbjct: 300 DKRALASQWIDFCWQPNIAKKIAVLTKTNSPIAKNIVAADIQKQLENLLLTNP------- 352
Query: 135 PSLGTDLIAGVPPAEILARCEFLEPLSEA 163
E+ + EFL PLS A
Sbjct: 353 --------------EVFDKSEFLLPLSPA 367
>gi|434405536|ref|YP_007148421.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
gi|428259791|gb|AFZ25741.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
Length = 382
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 23 VKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 78
VK Y+ + E I D W+AVGWSSD++P + R + VV+P+SG ++WADLW P
Sbjct: 241 VKFYSSNNYLEPLIIGDTWLAVGWSSDIVPLLGRYPQLTVVIPQSGTAIWADLWVRPTG 299
>gi|427731993|ref|YP_007078230.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
gi|427367912|gb|AFY50633.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
Length = 382
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 34 IRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-S 92
I D W+AVGWS+DV+P + R + +++P+SG ++WADLW P + ++ + +SQW
Sbjct: 254 IGDTWLAVGWSNDVVPILSRYPQMKMIIPRSGTAIWADLWVSPKGA--NQDDNLSSQWID 311
Query: 93 ISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILA 152
P++ KQ V+ S S + T + ++ ++G S + L+ E+
Sbjct: 312 FCWQPNI------AKQIVVRTKSNSPIPTNIA---DDDIQG--SFASLLLNN---QEVFD 357
Query: 153 RCEFLEPLSEAT 164
+ EFL PL T
Sbjct: 358 KSEFLLPLQLTT 369
>gi|354567783|ref|ZP_08986951.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
gi|353542241|gb|EHC11705.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
Length = 382
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 23 VKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
VK Y + E I D W+AVGWS DVLP V R +AVV P SG +LWAD+W P
Sbjct: 241 VKFYDSTRYLEPLIIGDTWLAVGWSDDVLPVVTRYPQLAVVTPLSGTALWADVWVKP 297
>gi|411118674|ref|ZP_11391054.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410710537|gb|EKQ68044.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 407
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 66/146 (45%), Gaps = 22/146 (15%)
Query: 34 IRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRL----HKTNWRAS 89
+ DVW+AVGWS+DVLP ++R +A + P+SG +L ADLW PA + W
Sbjct: 276 LDDVWLAVGWSTDVLPLMQRSRQIAAIAPRSGTALSADLWVHPAMTSTALPAAALQWIEF 335
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAE 149
W I + + A+ +L+ P+ L + D A +P +
Sbjct: 336 CWQTKIATQL-------------SLATWAVSPSLIGTPDTQLLAQ---FRDYPALLPNID 379
Query: 150 ILARCEFLEPLSEATFDVLR--WLKF 173
IL EFL PLSE R WL+
Sbjct: 380 ILQASEFLLPLSETATKQYRDLWLEM 405
>gi|218438983|ref|YP_002377312.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 7424]
gi|218171711|gb|ACK70444.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 7424]
Length = 384
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 18/137 (13%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
D+W+AVGWS++++P + R ++ +VP+SG +LWAD+W P S + +N A +W +
Sbjct: 253 DIWLAVGWSNEIIPLLSRRRDLKAIVPQSGTALWADVWVKP-TSDVKLSN-LAQEWINFC 310
Query: 95 IDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARC 154
P+ + + + V SP L+ KLP KP L L+ P IL +
Sbjct: 311 WQPTAVQQISLYTDAV----SPLILDQNSEKLP------KPILNNPLLFIEP--TILNKS 358
Query: 155 EFLEPL---SEATFDVL 168
EF++PL S+A ++ L
Sbjct: 359 EFIKPLPPSSQAQYEQL 375
>gi|298492009|ref|YP_003722186.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
0708]
gi|298233927|gb|ADI65063.1| extracellular solute-binding protein family 1 ['Nostoc azollae'
0708]
Length = 383
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 20 YGVVKLY---TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
+ VK Y T E D W+AVGWS+DV+P + R + V+P+SG ++WADLW P
Sbjct: 237 HQQVKFYDSTTYLEPLLTGDTWLAVGWSNDVMPILSRYPKLTAVIPQSGTAMWADLWVSP 296
Query: 77 A 77
A
Sbjct: 297 A 297
>gi|390439185|ref|ZP_10227598.1| Genome sequencing data, contig C304 [Microcystis sp. T1-4]
gi|389837404|emb|CCI31722.1| Genome sequencing data, contig C304 [Microcystis sp. T1-4]
Length = 382
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 63/131 (48%), Gaps = 19/131 (14%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
D+W++VGWS+D+LP R + VVVP SG SLW+D+W P L N QW
Sbjct: 254 DIWLSVGWSNDILPVSDRYKKIKVVVPNSGTSLWSDVWVKPV---LTTPNSLVQQWIDFC 310
Query: 95 IDP-SMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILAR 153
P S +I L G SP ++P + +K P L V P E + +
Sbjct: 311 WQPESATKISL-----FTSGLSPLIPTENPDQIPPD-IKNNPLL-------VNP-EAIKK 356
Query: 154 CEFLEPLSEAT 164
+FL PLS AT
Sbjct: 357 SDFLNPLSPAT 367
>gi|427706446|ref|YP_007048823.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
gi|427358951|gb|AFY41673.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
Length = 386
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 23 VKLY---TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
VK Y T E D W+AVGWSSDVLP + R + V+P+SG ++WADLW P +
Sbjct: 244 VKFYSSNTYLEPLVTGDTWLAVGWSSDVLPLLSRYPQLNAVIPQSGTAIWADLWVRPTKA 303
>gi|307153205|ref|YP_003888589.1| extracellular solute-binding protein [Cyanothece sp. PCC 7822]
gi|306983433|gb|ADN15314.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC
7822]
Length = 383
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 78
E + D W+AVGWS +++P +K ++A VVP+SG +LWAD+W PAA
Sbjct: 245 EPLILGDTWLAVGWSHEIIPLLKNYRDIAAVVPQSGTALWADIWVKPAA 293
>gi|255073983|ref|XP_002500666.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
gi|226515929|gb|ACO61924.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
Length = 580
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 31/163 (19%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP--AASRLHKTNWR 87
+A G D W+AVG S DVL ++ S + VVVP SG +L+AD+W +P AA + +
Sbjct: 386 QALGNGDAWIAVGNSDDVLSMARKSSLIGVVVPMSGTTLFADVWCVPASAARKPGGVSPL 445
Query: 88 ASQW-SISIDPSMDRILLPFKQEVIP---------------------------GTSPSAL 119
+QW + P+ + + + V P +
Sbjct: 446 TNQWFDYTTQPARVNLRVGLRGGVSPIVFDGGGIDYASIGMNGPTGGFVDYDAAGDKNGT 505
Query: 120 ETTLVKLPEELLKGKPSLGTDLI-AGVPPAEILARCEFLEPLS 161
K+ + L + + + G +++ G+PP E+ AR EFL PLS
Sbjct: 506 RGMGAKIKDFLSRDEKNRGGEIMQGGMPPDEVWARSEFLYPLS 548
>gi|428211975|ref|YP_007085119.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
gi|428000356|gb|AFY81199.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
Length = 417
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 65/146 (44%), Gaps = 45/146 (30%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA------------ASRLHK 83
D WVAVGWS+D+L ++R + VVP SG +LW++LW PA AS L
Sbjct: 280 DTWVAVGWSTDILATMQRNPQIRAVVPPSGTALWSELWVRPAGPNPVNPETPTPASSL-- 337
Query: 84 TNWRASQW-SISIDPSMDRILLPFKQEVIP-------GTSPSALETTLVKLPEELLKGKP 135
A+QW + +P M L + P G P+AL+T + LP
Sbjct: 338 ----ANQWINFCWNPEMAVQLSQLSKAASPMLLNRDRGELPNALQTNGILLPT------- 386
Query: 136 SLGTDLIAGVPPAEILARCEFLEPLS 161
AE +A EF+EPL+
Sbjct: 387 ------------AEAIANSEFIEPLT 400
>gi|186683650|ref|YP_001866846.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102]
gi|186466102|gb|ACC81903.1| extracellular solute-binding protein, family 1 [Nostoc punctiforme
PCC 73102]
Length = 385
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 23 VKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 78
VK Y+ + E + D W+AVGWSSDVL + R + V+P+SG ++WADLW PA
Sbjct: 244 VKFYSSNNYLEPLIMGDTWLAVGWSSDVLQVLGRYPQLGAVIPQSGTAMWADLWVRPAG 302
>gi|300869610|ref|ZP_07114190.1| Periplasmic polyamine-binding protein of ABC transporter
[Oscillatoria sp. PCC 6506]
gi|300332388|emb|CBN59390.1| Periplasmic polyamine-binding protein of ABC transporter
[Oscillatoria sp. PCC 6506]
Length = 349
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 23/157 (14%)
Query: 20 YGVVKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
+ KLY+ + + + D W AVGWS DVL ++ + VVP SG S+W DLW P
Sbjct: 197 HRQTKLYSSNSYLQPLVLGDTWAAVGWSGDVLRLMQNQKEIGAVVPISGTSMWVDLWVQP 256
Query: 77 AASRLHK----TNWRASQWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLK 132
+++ W W I M + +SP + LPE+L
Sbjct: 257 VSNQSSNLSLVEQWIDFCWQPQIATQMSLL--------TQASSPVIISMKREDLPEQLRI 308
Query: 133 GKPSLGTDLIAGVPPAEILARCEFLEPLSEATFDVLR 169
+ L P +E++++ EFL PL + + R
Sbjct: 309 NRLLL--------PESEVISKSEFLFPLPDVAIEQYR 337
>gi|81301075|ref|YP_401283.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 7942]
gi|81169956|gb|ABB58296.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 7942]
Length = 354
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 24/149 (16%)
Query: 23 VKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA- 78
VKLY+ + + D AVGWS+D+L A++R S +A VVP+SG ++W DLW P
Sbjct: 213 VKLYSSRNYLQPLLLGDALAAVGWSADILAALRRDSRLAAVVPRSGTAIWLDLWVQPQGR 272
Query: 79 -SRLHKTNWRASQWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSL 137
S + W W+ +I ++ P SP+ L V P
Sbjct: 273 VSEVFSDRWIDFGWAPTIATQFS--------QLGPAASPAILTAAAV---------APVD 315
Query: 138 GTDLIAGVPPAEILARCEFLEPLSEATFD 166
L +PP +L + E + PL EA D
Sbjct: 316 ANPL--QIPPTAVLDKSELILPLPEAVRD 342
>gi|427734714|ref|YP_007054258.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
gi|427369755|gb|AFY53711.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
Length = 388
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 23 VKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
VK Y + E + D W+AVGWS+D++ V R + VVVP SG +LWADLW P +
Sbjct: 241 VKFYNSTNYIEPLILGDTWLAVGWSNDIVSLVSRYPQLGVVVPNSGTALWADLWVQPKVT 300
>gi|56751841|ref|YP_172542.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Synechococcus elongatus PCC 6301]
gi|56686800|dbj|BAD80022.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 6301]
Length = 342
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 24/149 (16%)
Query: 23 VKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA- 78
VKLY+ + + D AVGWS+D+L A++R S +A VVP+SG ++W DLW P
Sbjct: 201 VKLYSSRNYLQPLLLGDALAAVGWSADILAALRRDSRLAAVVPRSGTAIWLDLWVQPQGR 260
Query: 79 -SRLHKTNWRASQWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSL 137
S + W W+ +I ++ P SP+ L V P
Sbjct: 261 VSEVFSDRWIDFGWAPTIATQFS--------QLGPAASPAILTAAAV---------APVD 303
Query: 138 GTDLIAGVPPAEILARCEFLEPLSEATFD 166
L +PP +L + E + PL EA D
Sbjct: 304 ANPL--QIPPTAVLDKSELILPLPEAVRD 330
>gi|254413480|ref|ZP_05027250.1| hypothetical protein MC7420_6059 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196179587|gb|EDX74581.1| hypothetical protein MC7420_6059 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 397
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 20 YGVVKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
+ VKLY+ E + D W+AVGWS+D+L R + V+P+SG SLWAD+W P
Sbjct: 237 HKQVKLYSSDHYLEPLVLGDTWLAVGWSTDILSLRGRDRQIQAVIPRSGTSLWADVWVQP 296
Query: 77 AASR 80
A +
Sbjct: 297 AVQK 300
>gi|359457473|ref|ZP_09246036.1| ABC transporter periplasmic solute-binding protein [Acaryochloris
sp. CCMEE 5410]
Length = 371
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 73
E + D W AVGWSSD+LPA+ R ++ V+P SG++LWADLW
Sbjct: 244 EPLILGDTWAAVGWSSDILPALAREPDLDAVLPASGSALWADLW 287
>gi|126660470|ref|ZP_01731578.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. CCY0110]
gi|126618229|gb|EAZ88990.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. CCY0110]
Length = 387
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 20/133 (15%)
Query: 34 IRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP----AASRLHKTNWRAS 89
+ DV V+VGWS++++P + + N+ VVP SG SLW+D+W P + L +T A
Sbjct: 253 VGDVDVSVGWSNEIIPLITKNRNIKAVVPTSGTSLWSDIWVKPKVKEGQNELSET---AK 309
Query: 90 QW-SISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPA 148
QW + P +I+ F SP ++ E++ P L D
Sbjct: 310 QWLNFCWQPQAAKIISLFAD----AASPMIDRIDKKEVSPEIM-NNPLLFID-------E 357
Query: 149 EILARCEFLEPLS 161
I +CEFLEPLS
Sbjct: 358 TIFEQCEFLEPLS 370
>gi|443323260|ref|ZP_21052268.1| spermidine/putrescine-binding periplasmic protein [Gloeocapsa sp.
PCC 73106]
gi|442786998|gb|ELR96723.1| spermidine/putrescine-binding periplasmic protein [Gloeocapsa sp.
PCC 73106]
Length = 374
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D W+AVGWS+D++P SN+ V+P SG SLW DLW A ++ I
Sbjct: 232 DTWLAVGWSTDIIPVANNYSNIEAVIPPSGTSLWVDLWVKSALTQPTAPEVEL------I 285
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
+D P E I + +A L L KP + +P EIL++ E
Sbjct: 286 KGWIDFCWQPRSAEAISLLTNAASPVILNAPVSGELTKKPLV-------IPSPEILSKSE 338
Query: 156 FLEPLSEATF 165
FL PL+ T
Sbjct: 339 FLLPLNMETL 348
>gi|427711348|ref|YP_007059972.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 6312]
gi|427375477|gb|AFY59429.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 6312]
Length = 354
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 73
D W+A WS+D+LP + R SN+ +VPKSG +LWAD W
Sbjct: 231 DTWIAQAWSTDILPILNRYSNIKAIVPKSGTALWADCW 268
>gi|427724862|ref|YP_007072139.1| extracellular solute-binding protein [Leptolyngbya sp. PCC 7376]
gi|427356582|gb|AFY39305.1| extracellular solute-binding protein family 1 [Leptolyngbya sp. PCC
7376]
Length = 374
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 27/44 (61%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
D WVA WS D L +KR N+ VVPKSG +LW DLW P S
Sbjct: 247 DTWVAQAWSQDALSLMKRYRNLGAVVPKSGTALWCDLWVQPKKS 290
>gi|427717210|ref|YP_007065204.1| extracellular solute-binding protein [Calothrix sp. PCC 7507]
gi|427349646|gb|AFY32370.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
7507]
Length = 376
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 23 VKLY---TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 78
VK Y T E D W+AV WS DV+P + R +A ++P+SG ++W DLW PA+
Sbjct: 235 VKFYASTTYLEPLITEDTWLAVAWSDDVMPVLARYPQLAAIIPQSGTAVWVDLWVRPAS 293
>gi|158338236|ref|YP_001519413.1| ABC transporter periplasmic solute-binding protein [Acaryochloris
marina MBIC11017]
gi|158308477|gb|ABW30094.1| ABC transporter, periplasmic solute-binding protein [Acaryochloris
marina MBIC11017]
Length = 371
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 73
E + D W AVGWSSD+LP + R ++ V P SG++LWADLW
Sbjct: 244 EPLILGDTWAAVGWSSDILPTLAREPDLEAVFPASGSALWADLW 287
>gi|434384916|ref|YP_007095527.1| spermidine/putrescine-binding periplasmic protein [Chamaesiphon
minutus PCC 6605]
gi|428015906|gb|AFY92000.1| spermidine/putrescine-binding periplasmic protein [Chamaesiphon
minutus PCC 6605]
Length = 403
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 20 YGVVKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
+ VK Y+ + I D WVAVGWS D +++ + VVP+SG ++ ADLW P
Sbjct: 239 HQQVKFYSADHYLQPLVIGDTWVAVGWSLDASELIQKNPQIGAVVPRSGTAISADLWVQP 298
Query: 77 AAS-RLHKTNWRASQWSISIDPS---MDRILLPFKQEVI----PGTSPSALETTLVKLPE 128
+ S +L N S + S +D L P I PG +P +P
Sbjct: 299 SLSPKLSPANRALLSNSNRLKLSNKWIDHCLQPQSSNQISVLTPGAAPLLTNLNPNDIPP 358
Query: 129 ELLKGKPSLGTDLIAGVPPAEILARCEFLEPLS---EATFDVL 168
++ K + +P E+L + EF+ P+S +A FD L
Sbjct: 359 DVRKN--------LLTLPSKEVLDKSEFIYPVSPTTKAQFDRL 393
>gi|428217472|ref|YP_007101937.1| extracellular solute-binding protein [Pseudanabaena sp. PCC 7367]
gi|427989254|gb|AFY69509.1| extracellular solute-binding protein family 1 [Pseudanabaena sp.
PCC 7367]
Length = 419
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 30/137 (21%)
Query: 34 IRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-S 92
I D W VGWS D+ + R + VVVP+ G +LW+D+W +P + A +W +
Sbjct: 287 IEDAWAVVGWSHDIEAQIDRQPKLRVVVPEEGTALWSDIWVLPKQQPRPTNSQAAYKWIN 346
Query: 93 ISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGV------- 145
++ P++ + +AL + +P + DL A +
Sbjct: 347 YTLSPAIANQI-------------TALTDAVSTMP---------VNADLPAKIRANQLKF 384
Query: 146 PPAEILARCEFLEPLSE 162
P E++A+ E L+PLS+
Sbjct: 385 PSPEVIAKSELLQPLSD 401
>gi|334121096|ref|ZP_08495171.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
gi|333455585|gb|EGK84231.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
Length = 369
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 19/154 (12%)
Query: 20 YGVVKLYTLSEAFG----IRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 75
+ VKLY+ S+A+ + D W+AVG S D+LP ++ ++A+V+P SG +LW DLW
Sbjct: 219 HQQVKLYS-SDAYLQPLILGDTWLAVGSSGDLLPLLQTQKDIALVIPVSGTALWTDLWVE 277
Query: 76 PAASRLHKTNWRASQWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKP 135
PA+ +W ID + + P + +SP + LPE
Sbjct: 278 PASGNPVSL---VEEW---IDFCLQPRVAPQLSLLAKASSPIIIGMKPEDLPE------- 324
Query: 136 SLGTDLIAGVPPAEILARCEFLEPLSEATFDVLR 169
++ T+ + +P A+ILA +FL P +A R
Sbjct: 325 AVRTNSVL-LPDAKILAASDFLLPFGDAGIAQYR 357
>gi|303290100|ref|XP_003064337.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226453935|gb|EEH51242.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 647
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
DVW+ G S DVL + SN+ VVVP SG +L+AD W +PAA+
Sbjct: 441 DVWIIAGNSDDVLKTAAKSSNIGVVVPSSGTTLYADAWCVPAAA 484
>gi|428297544|ref|YP_007135850.1| extracellular solute-binding protein [Calothrix sp. PCC 6303]
gi|428234088|gb|AFY99877.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
6303]
Length = 387
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 23 VKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
VK Y S E + D ++ GWS D+LP + R ++ +VP+SG ++WAD+W P S
Sbjct: 244 VKFYDSSKYLEPLLLGDTLISTGWSHDILPVMTRYPQLSAIVPESGTAIWADMWVNPINS 303
Query: 80 R 80
+
Sbjct: 304 Q 304
>gi|428317919|ref|YP_007115801.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
gi|428241599|gb|AFZ07385.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
Length = 369
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 19/145 (13%)
Query: 23 VKLYTLSEAFG----IRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 78
VK Y+ S+A+ + D W+AVG S D+LP ++ ++A+V+P SG +LW DLW PA+
Sbjct: 222 VKFYS-SDAYLQPLILGDTWLAVGSSGDLLPLLQTQKDIALVIPVSGTALWTDLWVEPAS 280
Query: 79 SRLHKTNWRASQWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLG 138
+W ID + + P + +SP + LPE ++
Sbjct: 281 GNPVSL---VDKW---IDFCLQPRIAPQLSLLAKASSPIIVGMKPEDLPE-------AVR 327
Query: 139 TDLIAGVPPAEILARCEFLEPLSEA 163
T+ + +P A+ILA +FL P +A
Sbjct: 328 TNSVL-LPDAKILAASDFLLPFGDA 351
>gi|307111783|gb|EFN60017.1| hypothetical protein CHLNCDRAFT_9420, partial [Chlorella
variabilis]
Length = 204
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 22 VVKLYTLSE---AFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 77
+V++++ S+ A G DV VGWS D+LP V R +N+ P SG SL+AD W IPA
Sbjct: 146 LVRVFSSSDHLRALGAGDVDAVVGWSDDLLPLVLRTNNLEAAAPLSGTSLFADCWCIPA 204
>gi|354566674|ref|ZP_08985845.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
gi|353544333|gb|EHC13787.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
Length = 361
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 16/127 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D+ +++ +SSD + + VVPKSG+SLW D IP +R +I
Sbjct: 236 DLLLSMCYSSDAVKITQENPKFKYVVPKSGSSLWTDTVVIPTTAR-------------NI 282
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
D + I F+ EV S TT + ELL K ++ PP IL +CE
Sbjct: 283 DGAYAWINFIFQPEVAAQISQRLWVTTSSRAAFELLPNKIKNDPNVF---PPDSILEKCE 339
Query: 156 FLEPLSE 162
+ PL E
Sbjct: 340 RITPLGE 346
>gi|443476073|ref|ZP_21065996.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
gi|443018979|gb|ELS33141.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
Length = 361
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
D AVGW+SD+ K+ N+ VV+P+ G +LW+D+W IP
Sbjct: 235 DTLAAVGWTSDMYKTAKQNPNLKVVIPQDGTALWSDIWVIP 275
>gi|83645024|ref|YP_433459.1| spermidine/putrescine-binding periplasmic protein [Hahella
chejuensis KCTC 2396]
gi|83633067|gb|ABC29034.1| Spermidine/putrescine-binding periplasmic protein [Hahella
chejuensis KCTC 2396]
Length = 349
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
E + DV + + W+ +V+ A + ++ + PK GA+ W D +AIPA + + +
Sbjct: 217 EPYMAGDVNLGMIWNGEVIQAQQENPDIQYIYPKEGAAFWVDSFAIPAGAENKENALKFI 276
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAE 149
+ + P + + + F P + SAL+ L +E L+ P++ PPAE
Sbjct: 277 DFMLQ--PEIAKRCVEFIGYATP--NKSALD-----LLDEKLRNNPTI-------FPPAE 320
Query: 150 ILARCEFLEPLSEA 163
++ + +F + + EA
Sbjct: 321 VIQKGDFQQDVGEA 334
>gi|308813680|ref|XP_003084146.1| putrescine-binding periplasmic protein-related (ISS) [Ostreococcus
tauri]
gi|116056029|emb|CAL58562.1| putrescine-binding periplasmic protein-related (ISS) [Ostreococcus
tauri]
Length = 429
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 12/142 (8%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRA- 88
+A D V VG S DV +R + + VVP+SG +LW+D W +P S + +
Sbjct: 279 QALACGDCAVVVGPSEDVFSVARRSTLIVPVVPRSGTTLWSDCWVVPTTSVTNVGGGPSP 338
Query: 89 --SQW-SISIDPSMDRILLPFKQEVIPGT-SPSALETTLVKLPEELLKGKPSLGT---DL 141
QW + ++ P+ + + K + P +E+ + P +P LGT D+
Sbjct: 339 ALEQWINYTLSPARVNMRVGLKGGISPLMFDGRGIESGYARYPN---VARPVLGTSDEDM 395
Query: 142 IAG-VPPAEILARCEFLEPLSE 162
+ G +P + A EF PL++
Sbjct: 396 LKGWIPDDSVWAASEFQLPLTD 417
>gi|103486605|ref|YP_616166.1| extracellular solute-binding protein [Sphingopyxis alaskensis
RB2256]
gi|98976682|gb|ABF52833.1| extracellular solute-binding protein, family 1 [Sphingopyxis
alaskensis RB2256]
Length = 368
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 22/140 (15%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
DV V + ++ D+ A+ ++ V+PK G+ L +D IP + H N A I +
Sbjct: 243 DVDVVLEYNGDIAQAMVEDDDIDFVIPKEGSQLNSDNLCIPKGAP-HPKNAHAFINYI-L 300
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
D ++D+ + E I +P+A L +PE K P + PPA++LA+CE
Sbjct: 301 DANVDKHI----TETILYPTPNAAAKAL--MPES-YKNNPVI-------FPPADVLAKCE 346
Query: 156 F------LEPLSEATFDVLR 169
+ L+PL E F +R
Sbjct: 347 YARFNPELQPLFEEAFTRVR 366
>gi|145355770|ref|XP_001422123.1| ABC(binding protein) family transporter: polyamine [Ostreococcus
lucimarinus CCE9901]
gi|144582363|gb|ABP00440.1| ABC(binding protein) family transporter: polyamine [Ostreococcus
lucimarinus CCE9901]
Length = 388
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 18/146 (12%)
Query: 29 SEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRA 88
++A D V +G S DV +R + + + VP SG +LW+D W +P A+ +K +
Sbjct: 233 TQAIACGDCAVVIGPSEDVFSVARRSTLIGLAVPSSGTTLWSDCWVVPTATVANKGGGPS 292
Query: 89 ---SQWSISIDPSMDRILLPFKQEVIPGTSP-----SALETTLVKLPEELLKGKPSLGT- 139
QW ID ++ + + + G SP ++ + P +P LG+
Sbjct: 293 PVLEQW---IDYTLQPARVNMRVGLKGGISPLMFDGRGVDGGYARYPNVA---RPVLGSD 346
Query: 140 --DLIAG-VPPAEILARCEFLEPLSE 162
D++ G +P + + EF PLS+
Sbjct: 347 DGDMLKGWIPDDSVWSASEFQLPLSD 372
>gi|423397904|ref|ZP_17375105.1| hypothetical protein ICU_03598 [Bacillus cereus BAG2X1-1]
gi|401649212|gb|EJS66798.1| hypothetical protein ICU_03598 [Bacillus cereus BAG2X1-1]
Length = 349
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|423472737|ref|ZP_17449480.1| hypothetical protein IEM_04042 [Bacillus cereus BAG6O-2]
gi|402427298|gb|EJV59407.1| hypothetical protein IEM_04042 [Bacillus cereus BAG6O-2]
Length = 349
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|423408761|ref|ZP_17385910.1| hypothetical protein ICY_03446 [Bacillus cereus BAG2X1-3]
gi|401657031|gb|EJS74543.1| hypothetical protein ICY_03446 [Bacillus cereus BAG2X1-3]
Length = 349
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|423455165|ref|ZP_17432018.1| hypothetical protein IEE_03909 [Bacillus cereus BAG5X1-1]
gi|401134948|gb|EJQ42555.1| hypothetical protein IEE_03909 [Bacillus cereus BAG5X1-1]
Length = 349
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|152974814|ref|YP_001374331.1| extracellular solute-binding protein [Bacillus cytotoxicus NVH
391-98]
gi|152023566|gb|ABS21336.1| extracellular solute-binding protein family 1 [Bacillus cytotoxicus
NVH 391-98]
Length = 350
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 214 NIKQKFITEDTWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK-HK 269
>gi|293334297|ref|NP_001170380.1| hypothetical protein [Zea mays]
gi|224035473|gb|ACN36812.1| unknown [Zea mays]
gi|414585610|tpg|DAA36181.1| TPA: hypothetical protein ZEAMMB73_943866 [Zea mays]
Length = 145
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 114 TSPSALETTLV-------KLPEELLKGKPSLGTDLIAGVPPAEILARCEFLEPLSEATFD 166
+SP L T L + P + K + L T+L+ GVPP EIL RCEFLEPLS +
Sbjct: 83 SSPEHLRTPLYLESPVPPEAPRDSNKRRTKLDTNLVRGVPPPEILERCEFLEPLSGKALE 142
Query: 167 VLR 169
R
Sbjct: 143 DYR 145
>gi|423481266|ref|ZP_17457956.1| hypothetical protein IEQ_01044 [Bacillus cereus BAG6X1-2]
gi|401146026|gb|EJQ53546.1| hypothetical protein IEQ_01044 [Bacillus cereus BAG6X1-2]
Length = 349
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|423524813|ref|ZP_17501286.1| hypothetical protein IGC_04196 [Bacillus cereus HuA4-10]
gi|401169039|gb|EJQ76286.1| hypothetical protein IGC_04196 [Bacillus cereus HuA4-10]
Length = 349
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|229160340|ref|ZP_04288338.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
R309803]
gi|228623064|gb|EEK79892.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
R309803]
Length = 349
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|373494689|ref|ZP_09585289.1| hypothetical protein HMPREF0380_00927 [Eubacterium infirmum F0142]
gi|371968070|gb|EHO85535.1| hypothetical protein HMPREF0380_00927 [Eubacterium infirmum F0142]
Length = 355
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 20/138 (14%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISIDPS 98
+AV W+ +VL + + S++ VVPK G+ + D+WAIPA + HK N A +W ID
Sbjct: 232 IAVVWNGEVLYSREENSDLDFVVPKEGSEEFLDMWAIPANAE-HKKN--AEKW---IDFM 285
Query: 99 MDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAE-ILARCEFL 157
M R T+ + +P + + + S T+ + P E I+++CE L
Sbjct: 286 MRR-----------KTALKNYKYLTYTIPNKAVIDEVSKDTENEKYIFPDESIISKCESL 334
Query: 158 EPLSEATFDVLR--WLKF 173
L D+ W KF
Sbjct: 335 MDLGTKYDDMYNKYWKKF 352
>gi|229084376|ref|ZP_04216656.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-44]
gi|228698916|gb|EEL51621.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-44]
Length = 360
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 224 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK-HK 279
>gi|427419007|ref|ZP_18909190.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
gi|425761720|gb|EKV02573.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
Length = 380
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK--TNWRASQWSI 93
DVW+AVGWS D+L + R + V P+ G L +DLW P ++L + W W +
Sbjct: 258 DVWLAVGWSGDILATLVRYRRLGAVHPQEGTVLTSDLWVAPTDAKLTEEAQAWMEFCWQM 317
Query: 94 SI 95
I
Sbjct: 318 PI 319
>gi|443316967|ref|ZP_21046392.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
gi|442783430|gb|ELR93345.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
Length = 393
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
+ WVAVGWS+++ P ++ +A VVP+ G L ADLW PA + + A + +
Sbjct: 259 EAWVAVGWSTEIRPVLEGYRQLAAVVPEPGTLLSADLWVHPAPQQGARMPLSAPEQAWID 318
Query: 96 DPSMDRILLP---FKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILA 152
+ LP F Q G +P L+ T+ L + + L+ +P EI+A
Sbjct: 319 YWWQENTALPLTLFSQ----GLAPQLLDGTIGDLTPDFSAAQ------LL--LPEGEIMA 366
Query: 153 RCEFLEPLS 161
EFL PL+
Sbjct: 367 NSEFLLPLA 375
>gi|423555852|ref|ZP_17532155.1| hypothetical protein II3_01057 [Bacillus cereus MC67]
gi|401196194|gb|EJR03140.1| hypothetical protein II3_01057 [Bacillus cereus MC67]
Length = 349
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|75760662|ref|ZP_00740689.1| Spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218896320|ref|YP_002444731.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus G9842]
gi|228899966|ref|ZP_04064205.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 4222]
gi|228964344|ref|ZP_04125462.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar sotto str. T04001]
gi|402561620|ref|YP_006604344.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-771]
gi|423361349|ref|ZP_17338851.1| hypothetical protein IC1_03328 [Bacillus cereus VD022]
gi|423564315|ref|ZP_17540591.1| hypothetical protein II5_03719 [Bacillus cereus MSX-A1]
gi|434374327|ref|YP_006608971.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-789]
gi|74491843|gb|EAO55032.1| Spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218543320|gb|ACK95714.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
G9842]
gi|228795353|gb|EEM42842.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228859677|gb|EEN04098.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 4222]
gi|401079797|gb|EJP88091.1| hypothetical protein IC1_03328 [Bacillus cereus VD022]
gi|401197346|gb|EJR04279.1| hypothetical protein II5_03719 [Bacillus cereus MSX-A1]
gi|401790272|gb|AFQ16311.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-771]
gi|401872884|gb|AFQ25051.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-789]
Length = 349
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|229132181|ref|ZP_04261039.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST196]
gi|228651328|gb|EEL07305.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST196]
Length = 349
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|163939195|ref|YP_001644079.1| extracellular solute-binding protein [Bacillus weihenstephanensis
KBAB4]
gi|229010675|ref|ZP_04167875.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
DSM 2048]
gi|229057017|ref|ZP_04196411.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH603]
gi|229166221|ref|ZP_04293981.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH621]
gi|423486501|ref|ZP_17463183.1| hypothetical protein IEU_01124 [Bacillus cereus BtB2-4]
gi|423492225|ref|ZP_17468869.1| hypothetical protein IEW_01123 [Bacillus cereus CER057]
gi|423500984|ref|ZP_17477601.1| hypothetical protein IEY_04211 [Bacillus cereus CER074]
gi|423516040|ref|ZP_17492521.1| hypothetical protein IG7_01110 [Bacillus cereus HuA2-4]
gi|423594690|ref|ZP_17570721.1| hypothetical protein IIG_03558 [Bacillus cereus VD048]
gi|423601276|ref|ZP_17577276.1| hypothetical protein III_04078 [Bacillus cereus VD078]
gi|423663736|ref|ZP_17638905.1| hypothetical protein IKM_04133 [Bacillus cereus VDM022]
gi|423667066|ref|ZP_17642095.1| hypothetical protein IKO_00763 [Bacillus cereus VDM034]
gi|423676900|ref|ZP_17651839.1| hypothetical protein IKS_04443 [Bacillus cereus VDM062]
gi|163861392|gb|ABY42451.1| extracellular solute-binding protein family 1 [Bacillus
weihenstephanensis KBAB4]
gi|228617319|gb|EEK74384.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH621]
gi|228720294|gb|EEL71870.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH603]
gi|228750640|gb|EEM00466.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
DSM 2048]
gi|401154308|gb|EJQ61726.1| hypothetical protein IEY_04211 [Bacillus cereus CER074]
gi|401156509|gb|EJQ63913.1| hypothetical protein IEW_01123 [Bacillus cereus CER057]
gi|401165883|gb|EJQ73193.1| hypothetical protein IG7_01110 [Bacillus cereus HuA2-4]
gi|401223642|gb|EJR30210.1| hypothetical protein IIG_03558 [Bacillus cereus VD048]
gi|401230703|gb|EJR37209.1| hypothetical protein III_04078 [Bacillus cereus VD078]
gi|401295636|gb|EJS01260.1| hypothetical protein IKM_04133 [Bacillus cereus VDM022]
gi|401304510|gb|EJS10062.1| hypothetical protein IKO_00763 [Bacillus cereus VDM034]
gi|401307161|gb|EJS12618.1| hypothetical protein IKS_04443 [Bacillus cereus VDM062]
gi|402439282|gb|EJV71289.1| hypothetical protein IEU_01124 [Bacillus cereus BtB2-4]
Length = 349
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK 266
>gi|228920100|ref|ZP_04083449.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|423579582|ref|ZP_17555693.1| hypothetical protein IIA_01097 [Bacillus cereus VD014]
gi|423637961|ref|ZP_17613614.1| hypothetical protein IK7_04370 [Bacillus cereus VD156]
gi|228839556|gb|EEM84848.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|401218044|gb|EJR24729.1| hypothetical protein IIA_01097 [Bacillus cereus VD014]
gi|401272763|gb|EJR78754.1| hypothetical protein IK7_04370 [Bacillus cereus VD156]
Length = 349
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|404370601|ref|ZP_10975922.1| hypothetical protein CSBG_02094 [Clostridium sp. 7_2_43FAA]
gi|226913267|gb|EEH98468.1| hypothetical protein CSBG_02094 [Clostridium sp. 7_2_43FAA]
Length = 350
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 27/141 (19%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISIDPS 98
+A+ WS + L N+ V+PK GA+ W D WAIPA + +T + + D +
Sbjct: 226 IAMIWSGEGLTLADENENLEYVIPKEGANYWLDSWAIPANANDKETAEKFINFVSGKDNA 285
Query: 99 MDRILLPFK-QEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFL 157
+K E I T+P+ L + + PEE+ K + G + P EI+ +CE
Sbjct: 286 -------YKIAEEIGYTTPNKL--AMEEQPEEV---KNNEGAYM-----PKEIMEKCEVY 328
Query: 158 EPLSEATFDVLRWLKFLRFYE 178
+ L + LR YE
Sbjct: 329 KYLPQEK---------LRLYE 340
>gi|423414921|ref|ZP_17392041.1| hypothetical protein IE1_04225 [Bacillus cereus BAG3O-2]
gi|423429297|ref|ZP_17406301.1| hypothetical protein IE7_01113 [Bacillus cereus BAG4O-1]
gi|401097841|gb|EJQ05863.1| hypothetical protein IE1_04225 [Bacillus cereus BAG3O-2]
gi|401121603|gb|EJQ29392.1| hypothetical protein IE7_01113 [Bacillus cereus BAG4O-1]
Length = 349
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|228938503|ref|ZP_04101112.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228971382|ref|ZP_04132008.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228977994|ref|ZP_04138374.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis Bt407]
gi|384185302|ref|YP_005571198.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
gi|410673593|ref|YP_006925964.1| spermidine/putrescine-binding periplasmic protein 2 [Bacillus
thuringiensis Bt407]
gi|423382787|ref|ZP_17360043.1| hypothetical protein ICE_00533 [Bacillus cereus BAG1X1-2]
gi|423530753|ref|ZP_17507198.1| hypothetical protein IGE_04305 [Bacillus cereus HuB1-1]
gi|452197614|ref|YP_007477695.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|228781782|gb|EEM29980.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis Bt407]
gi|228788249|gb|EEM36202.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228821240|gb|EEM67256.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|326939011|gb|AEA14907.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
gi|401643647|gb|EJS61341.1| hypothetical protein ICE_00533 [Bacillus cereus BAG1X1-2]
gi|402446087|gb|EJV77951.1| hypothetical protein IGE_04305 [Bacillus cereus HuB1-1]
gi|409172722|gb|AFV17027.1| spermidine/putrescine-binding periplasmic protein 2 [Bacillus
thuringiensis Bt407]
gi|452103007|gb|AGF99946.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 349
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|423609801|ref|ZP_17585662.1| hypothetical protein IIM_00516 [Bacillus cereus VD107]
gi|401250283|gb|EJR56584.1| hypothetical protein IIM_00516 [Bacillus cereus VD107]
Length = 349
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|228907017|ref|ZP_04070883.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 200]
gi|228852631|gb|EEM97419.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 200]
Length = 349
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|30019440|ref|NP_831071.1| spermidine/putrescine-binding protein [Bacillus cereus ATCC 14579]
gi|206968033|ref|ZP_03228989.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1134]
gi|218231222|ref|YP_002366071.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus B4264]
gi|228951768|ref|ZP_04113867.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|229043127|ref|ZP_04190854.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH676]
gi|229068938|ref|ZP_04202232.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
F65185]
gi|229078572|ref|ZP_04211130.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-2]
gi|229108843|ref|ZP_04238448.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-15]
gi|229126703|ref|ZP_04255715.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-Cer4]
gi|229149588|ref|ZP_04277820.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1550]
gi|229177795|ref|ZP_04305168.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
172560W]
gi|229189469|ref|ZP_04316486.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10876]
gi|365162078|ref|ZP_09358213.1| hypothetical protein HMPREF1014_03676 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423423468|ref|ZP_17400499.1| hypothetical protein IE5_01157 [Bacillus cereus BAG3X2-2]
gi|423434878|ref|ZP_17411859.1| hypothetical protein IE9_01059 [Bacillus cereus BAG4X12-1]
gi|423505017|ref|ZP_17481608.1| hypothetical protein IG1_02582 [Bacillus cereus HD73]
gi|423647316|ref|ZP_17622886.1| hypothetical protein IKA_01103 [Bacillus cereus VD169]
gi|449088176|ref|YP_007420617.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar kurstaki str. HD73]
gi|29894984|gb|AAP08272.1| Spermidine/putrescine-binding protein [Bacillus cereus ATCC 14579]
gi|206736953|gb|EDZ54100.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1134]
gi|218159179|gb|ACK59171.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
B4264]
gi|228594060|gb|EEK51862.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10876]
gi|228605586|gb|EEK63034.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
172560W]
gi|228633934|gb|EEK90531.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1550]
gi|228656643|gb|EEL12469.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-Cer4]
gi|228674612|gb|EEL29851.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-15]
gi|228704716|gb|EEL57144.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-2]
gi|228714222|gb|EEL66103.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
F65185]
gi|228726219|gb|EEL77449.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH676]
gi|228807890|gb|EEM54410.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|363619395|gb|EHL70714.1| hypothetical protein HMPREF1014_03676 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401115158|gb|EJQ23011.1| hypothetical protein IE5_01157 [Bacillus cereus BAG3X2-2]
gi|401125116|gb|EJQ32876.1| hypothetical protein IE9_01059 [Bacillus cereus BAG4X12-1]
gi|401286134|gb|EJR91967.1| hypothetical protein IKA_01103 [Bacillus cereus VD169]
gi|402454883|gb|EJV86671.1| hypothetical protein IG1_02582 [Bacillus cereus HD73]
gi|449021933|gb|AGE77096.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar kurstaki str. HD73]
Length = 349
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|229143992|ref|ZP_04272408.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST24]
gi|296501969|ref|YP_003663669.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
BMB171]
gi|423643567|ref|ZP_17619185.1| hypothetical protein IK9_03512 [Bacillus cereus VD166]
gi|423654168|ref|ZP_17629467.1| hypothetical protein IKG_01156 [Bacillus cereus VD200]
gi|228639389|gb|EEK95803.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST24]
gi|296323021|gb|ADH05949.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
BMB171]
gi|401274147|gb|EJR80125.1| hypothetical protein IK9_03512 [Bacillus cereus VD166]
gi|401296635|gb|EJS02252.1| hypothetical protein IKG_01156 [Bacillus cereus VD200]
Length = 349
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|228957658|ref|ZP_04119405.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|423629753|ref|ZP_17605501.1| hypothetical protein IK5_02604 [Bacillus cereus VD154]
gi|228802000|gb|EEM48870.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|401266887|gb|EJR72956.1| hypothetical protein IK5_02604 [Bacillus cereus VD154]
Length = 349
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|398984257|ref|ZP_10690526.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399011979|ref|ZP_10714307.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398116585|gb|EJM06344.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398155956|gb|EJM44383.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 362
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAIPA 276
>gi|398854217|ref|ZP_10610791.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398236715|gb|EJN22488.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 362
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAIPA 276
>gi|423509201|ref|ZP_17485732.1| hypothetical protein IG3_00698 [Bacillus cereus HuA2-1]
gi|402456492|gb|EJV88265.1| hypothetical protein IG3_00698 [Bacillus cereus HuA2-1]
Length = 349
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITADAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|237809505|ref|YP_002893945.1| extracellular solute-binding protein [Tolumonas auensis DSM 9187]
gi|237501766|gb|ACQ94359.1| extracellular solute-binding protein family 1 [Tolumonas auensis
DSM 9187]
Length = 366
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRM----SNVAV--VVPKSGASLWADLWAIPAASRLHKTNWRA 88
D+ VA+GWS DV+ A R +NV V V+PK GA ++ D+ AIPA S+ H N A
Sbjct: 233 DICVAIGWSGDVMQAAARAEEAKNNVTVDYVIPKEGALVFYDMLAIPADSK-HPENAHA 290
>gi|228990391|ref|ZP_04150356.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
pseudomycoides DSM 12442]
gi|228996492|ref|ZP_04156131.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock3-17]
gi|229004143|ref|ZP_04161944.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock1-4]
gi|228757004|gb|EEM06248.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock1-4]
gi|228763124|gb|EEM12032.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock3-17]
gi|228768917|gb|EEM17515.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
pseudomycoides DSM 12442]
Length = 349
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK-HK 268
>gi|258646316|ref|ZP_05733785.1| spermidine/putrescine-binding periplasmic protein PotD [Dialister
invisus DSM 15470]
gi|260403707|gb|EEW97254.1| spermidine/putrescine-binding periplasmic protein PotD [Dialister
invisus DSM 15470]
Length = 353
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
T+ + F + W+ WS D K ++A ++PK GA +WAD +AIP ++ HK
Sbjct: 218 TIKQKFIAEEAWIGTMWSGDASFTHKDNPDIAFIIPKEGAVIWADTFAIPKGAK-HK 273
>gi|398895172|ref|ZP_10647050.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398181368|gb|EJM68937.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 362
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKEGANLWFDLLAIPA 276
>gi|443316510|ref|ZP_21045951.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
gi|442783874|gb|ELR93773.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
Length = 382
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 24/133 (18%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D+ V + +S D + A + +VP SG+S+W D IP ++
Sbjct: 257 DLTVVMAYSVDAISATIEDDRMEYIVPASGSSVWTDTMVIPTSA---------------- 300
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPE----ELLKGKPSLGTDLIAGVPPAEIL 151
P++D + P S SA+E+ P +LL + DL P E+L
Sbjct: 301 -PNVDAAYEWMNFMLEPEVSTSAVESLFFATPNAVSLDLLSDEVRNNEDLF---PSDEVL 356
Query: 152 ARCEFLEPLSEAT 164
ARCE + P+ +AT
Sbjct: 357 ARCEGIAPIGDAT 369
>gi|302829761|ref|XP_002946447.1| hypothetical protein VOLCADRAFT_103032 [Volvox carteri f.
nagariensis]
gi|300268193|gb|EFJ52374.1| hypothetical protein VOLCADRAFT_103032 [Volvox carteri f.
nagariensis]
Length = 561
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 23 VKLYTLSE---AFGIRDVWVAVGWSSDVLPAVKRM-SNVAVVVPKSGASLWADLWAIPAA 78
V+L++ + A DVW VG+S +++ +R S++ ++ P SG LWAD+WA+PA
Sbjct: 306 VRLFSSQDHVRALQAGDVWAVVGYSQELVQLAERSGSSIELLAPLSGTQLWADVWAVPAG 365
Query: 79 SR 80
+R
Sbjct: 366 AR 367
>gi|229074647|ref|ZP_04207670.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-18]
gi|229095872|ref|ZP_04226851.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-29]
gi|229101987|ref|ZP_04232701.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-28]
gi|229114826|ref|ZP_04244240.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-3]
gi|407703754|ref|YP_006827339.1| glycolate oxidase [Bacillus thuringiensis MC28]
gi|423380811|ref|ZP_17358095.1| hypothetical protein IC9_04164 [Bacillus cereus BAG1O-2]
gi|423443843|ref|ZP_17420749.1| hypothetical protein IEA_04173 [Bacillus cereus BAG4X2-1]
gi|423445901|ref|ZP_17422780.1| hypothetical protein IEC_00509 [Bacillus cereus BAG5O-1]
gi|423466935|ref|ZP_17443703.1| hypothetical protein IEK_04122 [Bacillus cereus BAG6O-1]
gi|423536331|ref|ZP_17512749.1| hypothetical protein IGI_04163 [Bacillus cereus HuB2-9]
gi|423538424|ref|ZP_17514815.1| hypothetical protein IGK_00516 [Bacillus cereus HuB4-10]
gi|423544663|ref|ZP_17521021.1| hypothetical protein IGO_01098 [Bacillus cereus HuB5-5]
gi|423625631|ref|ZP_17601409.1| hypothetical protein IK3_04229 [Bacillus cereus VD148]
gi|228668891|gb|EEL24319.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-3]
gi|228681570|gb|EEL35733.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-28]
gi|228687705|gb|EEL41604.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-29]
gi|228708529|gb|EEL60679.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-18]
gi|401132994|gb|EJQ40627.1| hypothetical protein IEC_00509 [Bacillus cereus BAG5O-1]
gi|401177008|gb|EJQ84200.1| hypothetical protein IGK_00516 [Bacillus cereus HuB4-10]
gi|401183638|gb|EJQ90750.1| hypothetical protein IGO_01098 [Bacillus cereus HuB5-5]
gi|401254469|gb|EJR60698.1| hypothetical protein IK3_04229 [Bacillus cereus VD148]
gi|401631563|gb|EJS49360.1| hypothetical protein IC9_04164 [Bacillus cereus BAG1O-2]
gi|402411975|gb|EJV44337.1| hypothetical protein IEA_04173 [Bacillus cereus BAG4X2-1]
gi|402414739|gb|EJV47066.1| hypothetical protein IEK_04122 [Bacillus cereus BAG6O-1]
gi|402461168|gb|EJV92882.1| hypothetical protein IGI_04163 [Bacillus cereus HuB2-9]
gi|407381439|gb|AFU11940.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis MC28]
Length = 349
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|398952723|ref|ZP_10674961.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398154781|gb|EJM43245.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 362
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKEGANLWFDLLAIPA 276
>gi|402553230|ref|YP_006594501.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus FRI-35]
gi|401794440|gb|AFQ08299.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus FRI-35]
Length = 349
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|398968596|ref|ZP_10682419.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398143680|gb|EJM32551.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 362
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAIPA 276
>gi|384179321|ref|YP_005565083.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324325405|gb|ADY20665.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 349
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|42780475|ref|NP_977722.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus ATCC 10987]
gi|42736394|gb|AAS40330.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10987]
Length = 349
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|30261391|ref|NP_843768.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. Ames]
gi|47526566|ref|YP_017915.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. 'Ames Ancestor']
gi|49184220|ref|YP_027472.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. Sterne]
gi|65318655|ref|ZP_00391614.1| COG0687: Spermidine/putrescine-binding periplasmic protein
[Bacillus anthracis str. A2012]
gi|165870372|ref|ZP_02215027.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0488]
gi|167639331|ref|ZP_02397603.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0193]
gi|170706266|ref|ZP_02896727.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0389]
gi|177651500|ref|ZP_02934289.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0174]
gi|190568736|ref|ZP_03021640.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|227815871|ref|YP_002815880.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus anthracis str. CDC 684]
gi|229602179|ref|YP_002865806.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0248]
gi|254733970|ref|ZP_05191684.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Western North America USA6153]
gi|254753730|ref|ZP_05205765.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Vollum]
gi|254758826|ref|ZP_05210853.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Australia 94]
gi|386735088|ref|YP_006208269.1| Extracellular solute-binding protein family 1 precursor [Bacillus
anthracis str. H9401]
gi|421507071|ref|ZP_15953992.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. UR-1]
gi|30255245|gb|AAP25254.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Ames]
gi|47501714|gb|AAT30390.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49178147|gb|AAT53523.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Sterne]
gi|164713867|gb|EDR19389.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0488]
gi|167512770|gb|EDR88144.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0193]
gi|170128800|gb|EDS97666.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0389]
gi|172082778|gb|EDT67841.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0174]
gi|190560152|gb|EDV14133.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|227005570|gb|ACP15313.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. CDC 684]
gi|229266587|gb|ACQ48224.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0248]
gi|384384940|gb|AFH82601.1| Extracellular solute-binding protein family 1 precursor [Bacillus
anthracis str. H9401]
gi|401822723|gb|EJT21872.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. UR-1]
Length = 345
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 209 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 262
>gi|423618467|ref|ZP_17594301.1| hypothetical protein IIO_03793 [Bacillus cereus VD115]
gi|401254198|gb|EJR60434.1| hypothetical protein IIO_03793 [Bacillus cereus VD115]
Length = 349
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|228932668|ref|ZP_04095542.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228826986|gb|EEM72746.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 349
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|206977547|ref|ZP_03238441.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
H3081.97]
gi|217958863|ref|YP_002337411.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH187]
gi|222095022|ref|YP_002529082.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus Q1]
gi|375283358|ref|YP_005103796.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus NC7401]
gi|423354129|ref|ZP_17331755.1| hypothetical protein IAU_02204 [Bacillus cereus IS075]
gi|423371369|ref|ZP_17348709.1| hypothetical protein IC5_00425 [Bacillus cereus AND1407]
gi|423569696|ref|ZP_17545942.1| hypothetical protein II7_02918 [Bacillus cereus MSX-A12]
gi|206744265|gb|EDZ55678.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
H3081.97]
gi|217065950|gb|ACJ80200.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH187]
gi|221239080|gb|ACM11790.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Q1]
gi|358351884|dbj|BAL17056.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NC7401]
gi|401087330|gb|EJP95534.1| hypothetical protein IAU_02204 [Bacillus cereus IS075]
gi|401103195|gb|EJQ11180.1| hypothetical protein IC5_00425 [Bacillus cereus AND1407]
gi|401205915|gb|EJR12713.1| hypothetical protein II7_02918 [Bacillus cereus MSX-A12]
Length = 349
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423460733|ref|ZP_17437530.1| hypothetical protein IEI_03873 [Bacillus cereus BAG5X2-1]
gi|401140786|gb|EJQ48342.1| hypothetical protein IEI_03873 [Bacillus cereus BAG5X2-1]
Length = 349
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|167634382|ref|ZP_02392703.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0442]
gi|170686738|ref|ZP_02877958.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0465]
gi|254682552|ref|ZP_05146413.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. CNEVA-9066]
gi|254726214|ref|ZP_05187996.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A1055]
gi|254740343|ref|ZP_05198034.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Kruger B]
gi|421637888|ref|ZP_16078485.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. BF1]
gi|167530270|gb|EDR92996.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0442]
gi|170669261|gb|EDT20004.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0465]
gi|403395447|gb|EJY92686.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. BF1]
Length = 345
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 209 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 262
>gi|22298258|ref|NP_681505.1| hypothetical protein tll0716 [Thermosynechococcus elongatus BP-1]
gi|22294437|dbj|BAC08267.1| tll0716 [Thermosynechococcus elongatus BP-1]
Length = 352
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 39 VAVGWSSDVLPAVKR-MSNVAVVVPKSGASLWADLWAIPAASRLHKTNW----------- 86
+AVGWS+D+LP +++ V P SG +LW DLW P W
Sbjct: 231 LAVGWSTDLLPLLQQDPQTYGAVFPASGTALWVDLWVCPREPNAAALAWLNYWWQPQVAE 290
Query: 87 RASQWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLP 127
R SQ+S + P + + IP +P+A + V LP
Sbjct: 291 RLSQFSPAPSPLVRNLRETLLSRYIPFATPTAFAKSEVLLP 331
>gi|423576894|ref|ZP_17553013.1| hypothetical protein II9_04115 [Bacillus cereus MSX-D12]
gi|423606908|ref|ZP_17582801.1| hypothetical protein IIK_03489 [Bacillus cereus VD102]
gi|401206644|gb|EJR13432.1| hypothetical protein II9_04115 [Bacillus cereus MSX-D12]
gi|401241098|gb|EJR47490.1| hypothetical protein IIK_03489 [Bacillus cereus VD102]
Length = 349
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|398873539|ref|ZP_10628794.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398199204|gb|EJM86149.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 362
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKEGANLWFDLLAIPA 276
>gi|229138074|ref|ZP_04266672.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST26]
gi|229195584|ref|ZP_04322350.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1293]
gi|228587833|gb|EEK45885.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1293]
gi|228645419|gb|EEL01653.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST26]
Length = 306
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 170 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 223
>gi|426409667|ref|YP_007029766.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. UW4]
gi|426267884|gb|AFY19961.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. UW4]
Length = 362
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKEGANLWFDLLAIPA 276
>gi|49480039|ref|YP_035515.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52144048|ref|YP_082781.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus cereus E33L]
gi|118476862|ref|YP_894013.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis str. Al Hakam]
gi|196035369|ref|ZP_03102774.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
W]
gi|196046554|ref|ZP_03113779.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB108]
gi|218902495|ref|YP_002450329.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus AH820]
gi|225863250|ref|YP_002748628.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus cereus 03BB102]
gi|228913957|ref|ZP_04077581.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228926418|ref|ZP_04089490.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228944986|ref|ZP_04107347.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|229120927|ref|ZP_04250169.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
95/8201]
gi|229183580|ref|ZP_04310804.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BGSC 6E1]
gi|301052926|ref|YP_003791137.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus biovar anthracis str. CI]
gi|376265229|ref|YP_005117941.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus cereus F837/76]
gi|423552877|ref|ZP_17529204.1| hypothetical protein IGW_03508 [Bacillus cereus ISP3191]
gi|49331595|gb|AAT62241.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51977517|gb|AAU19067.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
E33L]
gi|118416087|gb|ABK84506.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis str. Al Hakam]
gi|195992046|gb|EDX56009.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
W]
gi|196022738|gb|EDX61420.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB108]
gi|218536733|gb|ACK89131.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH820]
gi|225787506|gb|ACO27723.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB102]
gi|228599990|gb|EEK57586.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BGSC 6E1]
gi|228662587|gb|EEL18185.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
95/8201]
gi|228814655|gb|EEM60915.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228833242|gb|EEM78807.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228845679|gb|EEM90706.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|300375095|gb|ADK03999.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
biovar anthracis str. CI]
gi|364511029|gb|AEW54428.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus cereus F837/76]
gi|401185490|gb|EJQ92584.1| hypothetical protein IGW_03508 [Bacillus cereus ISP3191]
Length = 349
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229172027|ref|ZP_04299592.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
MM3]
gi|423404099|ref|ZP_17381272.1| hypothetical protein ICW_04497 [Bacillus cereus BAG2X1-2]
gi|423475271|ref|ZP_17451986.1| hypothetical protein IEO_00729 [Bacillus cereus BAG6X1-1]
gi|228611370|gb|EEK68627.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
MM3]
gi|401647306|gb|EJS64915.1| hypothetical protein ICW_04497 [Bacillus cereus BAG2X1-2]
gi|402436373|gb|EJV68404.1| hypothetical protein IEO_00729 [Bacillus cereus BAG6X1-1]
Length = 349
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229029058|ref|ZP_04185157.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1271]
gi|228732338|gb|EEL83221.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1271]
Length = 349
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229154954|ref|ZP_04283068.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 4342]
gi|228628512|gb|EEK85225.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 4342]
Length = 349
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|47566174|ref|ZP_00237202.1| PotD [Bacillus cereus G9241]
gi|47556727|gb|EAL15058.1| PotD [Bacillus cereus G9241]
Length = 349
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|423420670|ref|ZP_17397759.1| hypothetical protein IE3_04142 [Bacillus cereus BAG3X2-1]
gi|401101237|gb|EJQ09228.1| hypothetical protein IE3_04142 [Bacillus cereus BAG3X2-1]
Length = 349
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|196040686|ref|ZP_03107985.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NVH0597-99]
gi|229090340|ref|ZP_04221584.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-42]
gi|196028476|gb|EDX67084.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NVH0597-99]
gi|228693034|gb|EEL46751.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-42]
Length = 349
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|228984460|ref|ZP_04144638.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228775326|gb|EEM23714.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 349
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|229016632|ref|ZP_04173570.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1273]
gi|229022847|ref|ZP_04179368.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1272]
gi|228738458|gb|EEL88933.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1272]
gi|228744663|gb|EEL94727.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1273]
Length = 349
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKGAK 266
>gi|94502154|ref|ZP_01308654.1| extracellular solute-binding protein, family 1 [Oceanobacter sp.
RED65]
gi|94425725|gb|EAT10733.1| extracellular solute-binding protein, family 1 [Oceanobacter sp.
RED65]
Length = 350
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 28/149 (18%)
Query: 29 SEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRA 88
++ G + V VG+S D+L ++ ++ +P+ GAS+W D+ AIP+ S + +R
Sbjct: 218 TDDLGAGKICVGVGYSGDILAEMESNPAISYNIPREGASMWFDMMAIPSNSENKELAYRL 277
Query: 89 SQWSISIDPSMDRILLPFKQEVIPGTS------PSALETTLVKLPEELLKGKPSLGTDLI 142
+ I GT+ P+ ++T + E+L+ K
Sbjct: 278 INF--------------LSTPKIAGTNSNYIAYPTPVDTAKAFVDAEILEDKTI------ 317
Query: 143 AGVPPAEILARCEFLEPLSEATFDVLRWL 171
P EILAR + PL + ++ L
Sbjct: 318 --YPSQEILARLQAFAPLERRSNNIKHRL 344
>gi|253681534|ref|ZP_04862331.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum D str. 1873]
gi|253561246|gb|EES90698.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum D str. 1873]
Length = 347
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 18/132 (13%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISIDPS 98
+AV WS D + +K N+ V+PK G++LW D IP S HK + ++ I+
Sbjct: 225 IAVVWSGDAITMMKNNPNLRYVIPKEGSNLWFDNMVIPKGSS-HK---KQAELFINF--- 277
Query: 99 MDRILLPFKQ-EVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFL 157
M R + K + I ++P+A T+ L +E K A P E + +CE
Sbjct: 278 MTRADISLKNVDYIGYSTPNA--KTMEMLDDETKNNK--------AAYPEYEKIKKCEVF 327
Query: 158 EPLSEATFDVLR 169
L + D R
Sbjct: 328 IDLGDFIKDYDR 339
>gi|402701746|ref|ZP_10849725.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
fragi A22]
Length = 362
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ +A G+S DV A+ R N+A VVPK G +LW D+ IPA ++
Sbjct: 229 DICIAFGYSGDVYQAIHRAQEAGNGVNIAYVVPKEGGNLWFDMLTIPADAK 279
>gi|86609220|ref|YP_477982.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557762|gb|ABD02719.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 383
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 23 VKLYTLSEAFGI---RDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA- 78
V YT S+ I D WVAVGWS D+ +AVV+P SG+++W D+W P
Sbjct: 226 VLTYTSSDYLPILRLADSWVAVGWSQDLYATQANYPELAVVIPASGSAIWWDVWVRPHVE 285
Query: 79 SRLHKTN 85
H+ N
Sbjct: 286 DHAHEDN 292
>gi|398921988|ref|ZP_10660067.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398163704|gb|EJM51855.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 362
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK GA+LW DL A+PA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAVPA 276
>gi|398925198|ref|ZP_10661743.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398172395|gb|EJM60261.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 362
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK GA+LW DL A+PA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAVPA 276
>gi|398973895|ref|ZP_10684687.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
gi|398142322|gb|EJM31222.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
Length = 362
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGANLWFDLLAIPA 276
>gi|254421830|ref|ZP_05035548.1| hypothetical protein S7335_1980 [Synechococcus sp. PCC 7335]
gi|196189319|gb|EDX84283.1| hypothetical protein S7335_1980 [Synechococcus sp. PCC 7335]
Length = 393
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 23 VKLY---TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
VK Y T +A DV V VGWSSDV A+KR ++ VVP G+ L AD+W P +
Sbjct: 244 VKTYDSNTALKALINEDVKVVVGWSSDVAVALKRYRDLRAVVPDEGSLLSADMWVQPKGA 303
Query: 80 RL 81
L
Sbjct: 304 TL 305
>gi|428226280|ref|YP_007110377.1| extracellular solute-binding protein [Geitlerinema sp. PCC 7407]
gi|427986181|gb|AFY67325.1| extracellular solute-binding protein family 1 [Geitlerinema sp. PCC
7407]
Length = 376
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 18/129 (13%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
D+ +A+ +SSD + ++ ++P+SG+SLW D IP ++ + A W +
Sbjct: 251 DLLIAMSYSSDAQLVTEENPDLEYLIPQSGSSLWVDTMVIPKSAPNVEA---AYAWLNFM 307
Query: 95 IDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARC 154
+ PS +L+ Q + T PS L LP E L+ P L PP ++LARC
Sbjct: 308 MQPS---VLVDLCQR-LGFTPPSRAAADL--LPTE-LRNDPGL-------FPPDQVLARC 353
Query: 155 EFLEPLSEA 163
E + P+S A
Sbjct: 354 EGIAPVSGA 362
>gi|423392318|ref|ZP_17369544.1| hypothetical protein ICG_04166 [Bacillus cereus BAG1X1-3]
gi|401634965|gb|EJS52727.1| hypothetical protein ICG_04166 [Bacillus cereus BAG1X1-3]
Length = 349
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K +V +VPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYIVPKEGGTIWADTLAIPKGAK 266
>gi|328545139|ref|YP_004305248.1| ABC transporter polyamine transport protein, periplasmic protein
[Polymorphum gilvum SL003B-26A1]
gi|326414881|gb|ADZ71944.1| ABC transporter, polyamine transport protein, periplasmic protein
[Polymorphum gilvum SL003B-26A1]
Length = 362
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRM----SNVAV--VVPKSGASLWADLWAIPAASR 80
D+ +AVGWS D+L A R +NV V V+PK GA +W D AIPA +R
Sbjct: 229 DICLAVGWSGDILQARDRAAEAGNNVTVEYVIPKEGALMWFDNMAIPADAR 279
>gi|386825143|ref|ZP_10112270.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia plymuthica PRI-2C]
gi|386378000|gb|EIJ18810.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia plymuthica PRI-2C]
Length = 369
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GWS DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAIGWSGDVMQAANRAKEAKNGVNVAYTIPKEGALTYFDMFAMPADAK 286
>gi|270261134|ref|ZP_06189407.1| hypothetical protein SOD_a03590 [Serratia odorifera 4Rx13]
gi|421782671|ref|ZP_16219125.1| putrescine-binding periplasmic protein [Serratia plymuthica A30]
gi|270044618|gb|EFA17709.1| hypothetical protein SOD_a03590 [Serratia odorifera 4Rx13]
gi|407755080|gb|EKF65209.1| putrescine-binding periplasmic protein [Serratia plymuthica A30]
Length = 369
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GWS DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAIGWSGDVMQAANRAKEAKNGVNVAYTIPKEGALTYFDMFAMPADAK 286
>gi|424923080|ref|ZP_18346441.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304240|gb|EJZ58202.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 362
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK GA+LW DL A+PA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGANLWFDLLAVPA 276
>gi|448241410|ref|YP_007405463.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia marcescens WW4]
gi|445211774|gb|AGE17444.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia marcescens WW4]
Length = 369
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GWS DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAIGWSGDVMQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAK 286
>gi|157369888|ref|YP_001477877.1| putrescine ABC transporter periplasmic-binding protein [Serratia
proteamaculans 568]
gi|157321652|gb|ABV40749.1| extracellular solute-binding protein family 1 [Serratia
proteamaculans 568]
Length = 369
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GWS DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAIGWSGDVMQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAK 286
>gi|398865909|ref|ZP_10621415.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398242096|gb|EJN27723.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 362
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEARNGVNIAYAIPKEGSNLWFDLLAIPA 276
>gi|398944508|ref|ZP_10671287.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398158081|gb|EJM46442.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 362
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHK 83
D+ VA G+S DV A R N+A +PK G++LW DL A+PA + K
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAVPADASNQK 282
>gi|453062799|gb|EMF03787.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Serratia marcescens VGH107]
Length = 368
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GWS DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAIGWSGDVMQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAK 286
>gi|398882696|ref|ZP_10637662.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398198363|gb|EJM85321.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
Length = 362
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAIPA 276
>gi|374336217|ref|YP_005092904.1| putrescine ABC transporter periplasmic-binding protein [Oceanimonas
sp. GK1]
gi|372985904|gb|AEY02154.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Oceanimonas sp. GK1]
Length = 368
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASRLHKTNWRA 88
D+ VAVGWS D+L A R VA +PK GA +W D+ IP +R H N A
Sbjct: 235 DICVAVGWSGDILQARDRADEAERGVKVAYRIPKEGALMWVDMLTIPKDAR-HPDNAHA 292
>gi|167630347|ref|YP_001680846.1| spermidine/putrescine abc transporter spermidine/putrescine-binding
protein [Heliobacterium modesticaldum Ice1]
gi|167593087|gb|ABZ84835.1| spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Heliobacterium
modesticaldum Ice1]
Length = 369
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 28 LSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F + W+ WS D K +VA V+PK G ++WAD AIP ++
Sbjct: 235 IKQKFITEEAWIGTMWSGDAAFVYKDNKDVAFVIPKEGTTIWADTLAIPKGAK 287
>gi|84683820|ref|ZP_01011723.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Maritimibacter alkaliphilus HTCC2654]
gi|84668563|gb|EAQ15030.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Maritimibacter alkaliphilus HTCC2654]
Length = 361
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 76
EA D+ VAVGWS D+L A R + + VVPK GA +W D AIP
Sbjct: 222 EALANGDICVAVGWSGDILQARDRAAEADNGNVIEYVVPKEGAQMWFDQMAIP 274
>gi|407364788|ref|ZP_11111320.1| extracellular solute-binding protein [Pseudomonas mandelii JR-1]
Length = 362
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAIPA 276
>gi|398879044|ref|ZP_10634147.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
gi|398197590|gb|EJM84567.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
Length = 362
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAIPA 276
>gi|77459054|ref|YP_348560.1| extracellular solute-binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77383057|gb|ABA74570.1| putrescine ABC transporter, substrate-binding protein [Pseudomonas
fluorescens Pf0-1]
Length = 362
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK GA+LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFRAANRAKEAKNGVNIAYSIPKEGANLWFDLLAIPA 276
>gi|333926484|ref|YP_004500063.1| family 1 extracellular solute-binding protein [Serratia sp. AS12]
gi|333931437|ref|YP_004505015.1| ABC transporter substrate-binding protein [Serratia plymuthica AS9]
gi|386328307|ref|YP_006024477.1| extracellular solute-binding protein [Serratia sp. AS13]
gi|333473044|gb|AEF44754.1| extracellular solute-binding protein family 1 [Serratia plymuthica
AS9]
gi|333490544|gb|AEF49706.1| extracellular solute-binding protein family 1 [Serratia sp. AS12]
gi|333960640|gb|AEG27413.1| extracellular solute-binding protein family 1 [Serratia sp. AS13]
Length = 369
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GWS DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAIGWSGDVMQAANRAKEAKNGVNVAYAIPKEGALTYFDMFAMPADAK 286
>gi|423588228|ref|ZP_17564315.1| hypothetical protein IIE_03640 [Bacillus cereus VD045]
gi|401226736|gb|EJR33270.1| hypothetical protein IIE_03640 [Bacillus cereus VD045]
Length = 349
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ + F D W+ WS D K +V VVPK G ++W D AIP ++ HK
Sbjct: 213 NIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWTDTLAIPKGAK-HK 268
>gi|149187665|ref|ZP_01865962.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Vibrio shilonii AK1]
gi|148838545|gb|EDL55485.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Vibrio shilonii AK1]
Length = 369
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTN 85
DV VA+GWS DVL A R + VA +PK GA W DL AIP ++ H N
Sbjct: 237 DVCVAIGWSGDVLQAADRAAEADNGVEVAYSIPKEGALAWFDLMAIPKEAK-HPEN 291
>gi|395236033|ref|ZP_10414233.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter sp. Ag1]
gi|394729339|gb|EJF29335.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter sp. Ag1]
Length = 370
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GWS D+L A R NVA +PK GA ++ D++A+P ++
Sbjct: 237 DICVAIGWSGDILQAANRAKEAKNGVNVAYSIPKEGAMVYFDMFALPVDAK 287
>gi|358457960|ref|ZP_09168174.1| extracellular solute-binding protein family 1 [Frankia sp. CN3]
gi|357078747|gb|EHI88192.1| extracellular solute-binding protein family 1 [Frankia sp. CN3]
Length = 438
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 22 VVKLYTLS--EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
V K YT +A D+W+++ WS DV V N+ VVPK G LW D IP
Sbjct: 296 VRKYYTQDYIDALASGDLWISMAWSGDVYQQVAEGKNLRFVVPKEGGILWTDNLCIP 352
>gi|158321557|ref|YP_001514064.1| extracellular solute-binding protein [Alkaliphilus oremlandii
OhILAs]
gi|158141756|gb|ABW20068.1| extracellular solute-binding protein family 1 [Alkaliphilus
oremlandii OhILAs]
Length = 348
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 19/123 (15%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISIDPS 98
+A+ WS D + + + +A VVPK G++LW D IP +++ N ++ I+
Sbjct: 226 IAIAWSGDAMLMMGQNEKLAYVVPKEGSNLWFDNMVIPKSAK----NKELAEKFINF--- 278
Query: 99 MDRILLPFKQ-EVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE-F 156
M R + K E I ++P+ T+ L EELL P +I+ CE F
Sbjct: 279 MTRPEISLKNVEYIEYSTPNT--GTMELLDEELLNNP--------VAYPSDDIVDNCEVF 328
Query: 157 LEP 159
L+P
Sbjct: 329 LDP 331
>gi|427736973|ref|YP_007056517.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
gi|427372014|gb|AFY55970.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
Length = 361
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 26/132 (19%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D+ +A+ +SSD + + + PKSG+SLW D AIP + +I
Sbjct: 236 DLVLAMCYSSDAFLITRDNPKLKYITPKSGSSLWTDTIAIPITTS-------------NI 282
Query: 96 DPSMDRILLPFKQEVIPGTSP-----SALETTLVKLPEELLKGKPSLGTDLIAGVPPAEI 150
D + + I K EV S + + LPE+ ++ P+L PP I
Sbjct: 283 DGAYEWINFMLKPEVAARMSQRLGVATPNQAGFELLPEK-IQNNPTL-------FPPENI 334
Query: 151 LARCEFLEPLSE 162
L +CE L P+ E
Sbjct: 335 LEKCERLSPVGE 346
>gi|395499287|ref|ZP_10430866.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. PAMC 25886]
gi|395793876|ref|ZP_10473221.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. Ag1]
gi|421143690|ref|ZP_15603626.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens BBc6R8]
gi|395341989|gb|EJF73785.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. Ag1]
gi|404505108|gb|EKA19142.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens BBc6R8]
Length = 362
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|423366876|ref|ZP_17344309.1| hypothetical protein IC3_01978 [Bacillus cereus VD142]
gi|401086856|gb|EJP95075.1| hypothetical protein IC3_01978 [Bacillus cereus VD142]
Length = 349
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ + F D W+ WS D K ++ VVPK G ++WAD AIP ++
Sbjct: 213 NIKQKFITADAWIGTVWSGDAAFIAKDNKDIEYVVPKEGGTIWADTLAIPKGAK 266
>gi|398859600|ref|ZP_10615273.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
gi|398236561|gb|EJN22339.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
Length = 362
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAIPA 276
>gi|333900395|ref|YP_004474268.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333115660|gb|AEF22174.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 361
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D+ VAVG+S DV+ A R + + V+PK GA+LW D+ AIP +R
Sbjct: 228 DICVAVGYSGDVMQAQSRAKDAGKSVDIRYVIPKEGANLWFDMLAIPCDAR 278
>gi|395649466|ref|ZP_10437316.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 362
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|229590032|ref|YP_002872151.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
fluorescens SBW25]
gi|229361898|emb|CAY48798.1| putrescine ABC transporter, substrate-binding protein [Pseudomonas
fluorescens SBW25]
Length = 362
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|398998348|ref|ZP_10701126.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398120775|gb|EJM10428.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 362
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK G++LW DL A+PA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAVPA 276
>gi|386826294|ref|ZP_10113401.1| spermidine/putrescine-binding periplasmic protein [Beggiatoa alba
B18LD]
gi|386427178|gb|EIJ41006.1| spermidine/putrescine-binding periplasmic protein [Beggiatoa alba
B18LD]
Length = 369
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 63/143 (44%), Gaps = 41/143 (28%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHK 83
A D+ VAVGWS DVL A R + V VPK G +W D+ AIP +
Sbjct: 230 NALANGDICVAVGWSGDVLQAADRAAEANKGVKVEYSVPKEGTIMWVDMMAIPKDA---- 285
Query: 84 TNWRASQWSISIDPSMDRILLPFKQEVIPGTS---------PSALETTLVKLPEELLKGK 134
+ S+ ++ +D IL P EVI G S P++LE K+ +E+ K
Sbjct: 286 ---KNSEAALKF---LDFILRP---EVIAGVSNFVHYANPNPASLE----KVADEVKNNK 332
Query: 135 PSLGTDLIAGVPPAEILARCEFL 157
GV PAE + + F+
Sbjct: 333 ---------GVFPAEDVKKKLFM 346
>gi|253575509|ref|ZP_04852846.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251845156|gb|EES73167.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 335
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
W+A WS D + +VA VVPK G ++W+D +AIP S+ HK
Sbjct: 210 WIATVWSGDASYIAQDNPDVAYVVPKEGGTIWSDNYAIPKDSK-HK 254
>gi|428206397|ref|YP_007090750.1| extracellular solute-binding protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428008318|gb|AFY86881.1| extracellular solute-binding protein family 1 [Chroococcidiopsis
thermalis PCC 7203]
Length = 373
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 22/135 (16%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP-AASRLHKTNWRASQW-SI 93
D+ +A+ +S+D + + N+ ++P SG SLW D AIP A L A W +
Sbjct: 248 DLVLAMAYSTDGIKISQENPNLRYIIPASGTSLWTDTIAIPKTAPNLDA----AYTWLNY 303
Query: 94 SIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILAR 153
+++P++ + + IP + L +LP +L + T+L PP +L +
Sbjct: 304 NLEPTVAAEICQRQTVAIPN------QVALEQLPTQLRQ-----DTNLF---PPESVLNK 349
Query: 154 CEFLEPLSEATFDVL 168
CE + PL + FD +
Sbjct: 350 CERISPLGD--FDAV 362
>gi|300869344|ref|ZP_07113934.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
gi|300332643|emb|CBN59132.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
Length = 376
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 34 IRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
+ D+ VA+ +SSD + +N+ +VP+SG+SLW D IP + + ++ + +
Sbjct: 249 VGDLMVAMCYSSDANEVIPENTNLQYIVPRSGSSLWTDTLVIPKFAPNPEAAYKWINFML 308
Query: 94 SIDPS---MDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEI 150
D + +DR+ ++PS L+ +P + + I PP EI
Sbjct: 309 QGDVAASLVDRLSF---------STPSEEAFNLL---------EPEVRENKIL-FPPEEI 349
Query: 151 LARCEFLEPLSEAT 164
LA+C+ + P+ E T
Sbjct: 350 LAKCQGIAPVGEVT 363
>gi|126729921|ref|ZP_01745733.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sagittula stellata E-37]
gi|126709301|gb|EBA08355.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sagittula stellata E-37]
Length = 365
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 31 AFGIRDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 76
A ++ VAVGWS DVL A R + VA ++PK GA +W D+ A+P
Sbjct: 227 ALANGEICVAVGWSGDVLQARDRAAEADNGVEVAYIIPKEGAQMWFDMMAVP 278
>gi|398840193|ref|ZP_10597431.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
gi|398111211|gb|EJM01101.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
Length = 362
Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|398907683|ref|ZP_10654002.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
gi|398171118|gb|EJM59030.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
Length = 362
Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|427419359|ref|ZP_18909542.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
gi|425762072|gb|EKV02925.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
Length = 381
Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D+ +++ +S + +P N V+P+SG+S+W D IPA++ + + +++
Sbjct: 256 DLLLSMVYSVEGIPVSLENPNFKYVIPESGSSVWTDTMVIPASAPNVEAAYEWINFNLQP 315
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
S D + E + +P+ T+ L +ELL K PP +ILA+CE
Sbjct: 316 QVSKDTV------ERLFFATPNGEAMTM--LSQELLDNKNLF--------PPEDILAKCE 359
Query: 156 FLEPLSEAT 164
+ P+ EA
Sbjct: 360 GIAPVGEAN 368
>gi|145297278|ref|YP_001140119.1| ABC-type putrescine transporter periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida A449]
gi|142850050|gb|ABO88371.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida A449]
Length = 361
Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S D+L A R N+A +PK G +LW D+ AIPA
Sbjct: 228 DICVAAGFSGDILQAAARADEAGKGINIAYSIPKEGGNLWFDMMAIPA 275
>gi|427723684|ref|YP_007070961.1| extracellular solute-binding protein [Leptolyngbya sp. PCC 7376]
gi|427355404|gb|AFY38127.1| extracellular solute-binding protein family 1 [Leptolyngbya sp. PCC
7376]
Length = 386
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 20/129 (15%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP--AASRLHKTNWRASQWSI 93
D+ VA+ +SSD + N A VVP SG+S+WAD IP A + W +
Sbjct: 260 DLLVAMCYSSDANEITEEDDNFAYVVPSSGSSVWADTLVIPRTAPNVPGAYAWMSFMMRA 319
Query: 94 SIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILAR 153
+ + + L F PG LPE+ ++ P+L P +E + R
Sbjct: 320 QVSAEITQ-RLSFATPNRPGYE---------LLPED-VRTNPNL-------FPSSETIDR 361
Query: 154 CEFLEPLSE 162
CE L+PL E
Sbjct: 362 CEGLKPLGE 370
>gi|317491403|ref|ZP_07949839.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920950|gb|EFV42273.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 368
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGWS DV+ A R N+A +PK GA ++ D++A+PA ++
Sbjct: 235 DICVAVGWSGDVMQAANRAKEAKNGVNIAYSIPKEGALVFFDVFAMPADAK 285
>gi|323494348|ref|ZP_08099460.1| extracellular solute-binding protein family 1 [Vibrio brasiliensis
LMG 20546]
gi|323311511|gb|EGA64663.1| extracellular solute-binding protein family 1 [Vibrio brasiliensis
LMG 20546]
Length = 369
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTN 85
D+ VA+GWS DVL A R + +A +PK GA W DL AIP ++ H N
Sbjct: 237 DICVAIGWSGDVLQAADRAAEADNGVEIAYSIPKEGALAWFDLMAIPKEAK-HPEN 291
>gi|365837890|ref|ZP_09379247.1| putrescine-binding periplasmic protein [Hafnia alvei ATCC 51873]
gi|364561081|gb|EHM38995.1| putrescine-binding periplasmic protein [Hafnia alvei ATCC 51873]
Length = 368
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGWS DV+ A R N+A +PK GA ++ D++A+PA ++
Sbjct: 235 DICVAVGWSGDVMQAANRAKEAKNGVNIAYSIPKEGALVFFDVFAMPADAK 285
>gi|418362030|ref|ZP_12962674.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida 01-B526]
gi|356686665|gb|EHI51258.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida 01-B526]
Length = 353
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S D+L A R N+A +PK G +LW D+ AIPA
Sbjct: 220 DICVAAGFSGDILQAAARADEAGKGINIAYSIPKEGGNLWFDMMAIPA 267
>gi|409422830|ref|ZP_11259910.1| periplasmic putrescine-binding protein [Pseudomonas sp. HYS]
Length = 362
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHK 83
D+ VA G+S DV A R N+A +PK G++LW DL AIP+ + K
Sbjct: 229 DICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKEGSNLWFDLLAIPSDASNRK 282
>gi|374705415|ref|ZP_09712285.1| ABC transporter substrate-binding protein [Pseudomonas sp. S9]
Length = 358
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D+ VAVG+S D+L + R ++ + VVPK GA LW D+ A+PA S+
Sbjct: 225 DICVAVGFSGDILQSATRAADANNGVHIDYVVPKEGAPLWFDMVAMPADSK 275
>gi|375264908|ref|YP_005022351.1| extracellular solute-binding protein [Vibrio sp. EJY3]
gi|369840232|gb|AEX21376.1| extracellular solute-binding protein [Vibrio sp. EJY3]
Length = 369
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTN 85
D+ VA+GWS DVL A R + +A +PK GA W DL AIP ++ H N
Sbjct: 237 DICVAIGWSGDVLQAADRAAEADNGVEIAYSIPKEGALAWFDLMAIPKDAK-HPEN 291
>gi|261253386|ref|ZP_05945959.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|417953143|ref|ZP_12596191.1| extracellular solute-binding protein family 1 [Vibrio orientalis
CIP 102891 = ATCC 33934]
gi|260936777|gb|EEX92766.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|342817675|gb|EGU52552.1| extracellular solute-binding protein family 1 [Vibrio orientalis
CIP 102891 = ATCC 33934]
Length = 369
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTN 85
D+ VA+GWS DVL A R + +A +PK GA W DL AIP ++ H N
Sbjct: 237 DICVAIGWSGDVLQAADRAAEADNGVEIAYSIPKEGALAWFDLMAIPKEAK-HPEN 291
>gi|443700412|gb|ELT99374.1| hypothetical protein CAPTEDRAFT_95386, partial [Capitella teleta]
Length = 329
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHK 83
D+ VA+GWS D++ A R ++ VVPK GA +W D+ AIP S+ HK
Sbjct: 196 DICVALGWSGDMMMARDRAKEANNGLDIRYVVPKEGAPMWFDMLAIPKDSK-HK 248
>gi|393765753|ref|ZP_10354314.1| extracellular solute-binding protein [Methylobacterium sp. GXF4]
gi|392728989|gb|EIZ86293.1| extracellular solute-binding protein [Methylobacterium sp. GXF4]
Length = 394
Score = 43.1 bits (100), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 21 GVVKLYTLSE---AFGIRDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWAD 71
G V+ + SE A D+ VAVG+S DV+ A +R +A VVPK GA +W D
Sbjct: 243 GSVRKFHASEYIQALANGDICVAVGYSGDVMQAKRRAEEAKNGIEIAYVVPKEGALMWFD 302
Query: 72 LWAIP 76
+AIP
Sbjct: 303 TFAIP 307
>gi|374703156|ref|ZP_09710026.1| extracellular solute-binding protein [Pseudomonas sp. S9]
Length = 365
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
++ VA G+S DVL A R ++A +PK G +LW D+ AIPA S+
Sbjct: 232 NICVAAGFSGDVLQAADRAEEAGKGIDIAYAIPKEGGNLWFDMMAIPADSK 282
>gi|398853858|ref|ZP_10610447.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398238126|gb|EJN23862.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 365
Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
D+ VA+G+S D+ A R + N+A VPK G +LW D+ AIP S
Sbjct: 232 DICVAIGFSGDIFQAKNRAAEAKKGVNIAYTVPKEGGALWFDMLAIPKDS 281
>gi|224025704|ref|ZP_03644070.1| hypothetical protein BACCOPRO_02445 [Bacteroides coprophilus DSM
18228]
gi|224018940|gb|EEF76938.1| hypothetical protein BACCOPRO_02445 [Bacteroides coprophilus DSM
18228]
Length = 445
Score = 43.1 bits (100), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 16/143 (11%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D A++ V V VP+ G+++W D W IP +R N +A+ + I
Sbjct: 250 WMNMTWSGDAQWAIEEARTVGVELAYTVPEEGSNIWYDGWVIPKYAR----NRKAASYFI 305
Query: 94 SIDPSMDRILLPFKQE--VIPGTSPSALETTLVKLPEELLKGKPSLGTDLIA------GV 145
+ D L ++ V +P +E + E + G D A
Sbjct: 306 NFLCRPDIALRNMEENGYVSSIAAPEIMEACIDTTLTEPVDASYFFGPDARAVKLRNTQY 365
Query: 146 PPAEILARCEFLEPLSEATFDVL 168
P ++ARC + + T DVL
Sbjct: 366 PDRSVVARCAMIRDFGDRTVDVL 388
>gi|398983481|ref|ZP_10690058.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399013788|ref|ZP_10716090.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398112689|gb|EJM02545.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398157207|gb|EJM45608.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 365
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
D+ VA+G+S D+ A R + N+A VPK G +LW D+ AIP S
Sbjct: 232 DICVAIGFSGDIFQAKNRAAEAKKGVNIAYAVPKEGGALWFDMLAIPKDS 281
>gi|374853292|dbj|BAL56204.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
gi|374857069|dbj|BAL59922.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
Length = 352
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D+ +A GWS + A SN+ V+P+ G +WAD AIP +S+ + + + +
Sbjct: 227 DLVLAHGWSGEFAKAHVENSNIRYVIPREGGVIWADNLAIPKSSQ--RIDLAHTFIDFLL 284
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
P+++ ++ F + P T+ +A T LPE + P++ PP EIL + E
Sbjct: 285 RPTINAKIVNFLR--YPSTNEAA---TAHILPE--IVNDPAI-------YPPEEILEKLE 330
Query: 156 FLEPLSEA 163
++ + +A
Sbjct: 331 WIRDVGDA 338
>gi|398954989|ref|ZP_10676221.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398151733|gb|EJM40272.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 365
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
D+ VAVG+S D+ A R N+A +PK G +LW D+ AIP S
Sbjct: 232 DICVAVGFSGDIFQARNRAQEAKKGINIAYAIPKEGGALWFDMLAIPKDS 281
>gi|70730318|ref|YP_260057.1| periplasmic putrescine-binding protein [Pseudomonas protegens Pf-5]
gi|68344617|gb|AAY92223.1| periplasmic putrescine-binding protein [Pseudomonas protegens Pf-5]
Length = 362
Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ +A G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 229 DICIAFGYSGDVFQAANRAREAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|326797025|ref|YP_004314845.1| extracellular solute-binding protein [Marinomonas mediterranea
MMB-1]
gi|326547789|gb|ADZ93009.1| extracellular solute-binding protein family 1 [Marinomonas
mediterranea MMB-1]
Length = 373
Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 31 AFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKT 84
A ++ VA+GWS DV+ A R S N+ +PK G +W D+ AIP ++ +
Sbjct: 235 ALANGEICVAIGWSGDVIQAQDRASEAENGVNIEYSIPKEGTQIWFDMLAIPKGAKNKEA 294
Query: 85 NWR 87
++
Sbjct: 295 AYK 297
>gi|398887585|ref|ZP_10642244.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398192053|gb|EJM79222.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 365
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
D+ VAVG+S D+ A R N+A +PK G +LW D+ AIP S
Sbjct: 232 DICVAVGFSGDIFQARNRAKEAKKGINIAYAIPKEGGALWFDMLAIPKDS 281
>gi|157374200|ref|YP_001472800.1| extracellular solute-binding protein [Shewanella sediminis HAW-EB3]
gi|157316574|gb|ABV35672.1| extracellular solute-binding protein, family 1 [Shewanella
sediminis HAW-EB3]
Length = 366
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
D+ VAVG+S D+L A R + +PK GA+LW D+ AIPA
Sbjct: 233 DLCVAVGYSGDILQAATRAEEAENGHVIGYSIPKEGANLWFDMLAIPA 280
>gi|168204845|ref|ZP_02630850.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens E str. JGS1987]
gi|169343777|ref|ZP_02864776.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens C str. JGS1495]
gi|422346637|ref|ZP_16427551.1| hypothetical protein HMPREF9476_01624 [Clostridium perfringens
WAL-14572]
gi|422874887|ref|ZP_16921372.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens F262]
gi|169298337|gb|EDS80427.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens C str. JGS1495]
gi|170663543|gb|EDT16226.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens E str. JGS1987]
gi|373226182|gb|EHP48509.1| hypothetical protein HMPREF9476_01624 [Clostridium perfringens
WAL-14572]
gi|380304161|gb|EIA16452.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens F262]
Length = 360
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 18/118 (15%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SISIDP 97
+AV WS D + ++R ++A +PK G++ W D AIP ++ HK N A ++ + DP
Sbjct: 236 LAVAWSGDAVTMIERNPDLAYAIPKEGSNKWFDAIAIPKNAK-HKEN--AEKFINFLCDP 292
Query: 98 SMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
+ + P T+ L LPE++ K P E L CE
Sbjct: 293 ENAEQNVEYIGYSTPNTAAYDL------LPEDIRDDK--------VAYPDEESLKNCE 336
>gi|110799081|ref|YP_696650.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Clostridium perfringens ATCC 13124]
gi|168208672|ref|ZP_02634297.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens B str. ATCC 3626]
gi|168215597|ref|ZP_02641222.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens NCTC 8239]
gi|182624392|ref|ZP_02952176.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens D str. JGS1721]
gi|110673728|gb|ABG82715.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens ATCC 13124]
gi|170713086|gb|EDT25268.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens B str. ATCC 3626]
gi|177910395|gb|EDT72772.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens D str. JGS1721]
gi|182382380|gb|EDT79859.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens NCTC 8239]
Length = 360
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 18/118 (15%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SISIDP 97
+AV WS D + ++R ++A +PK G++ W D AIP ++ HK N A ++ + DP
Sbjct: 236 LAVAWSGDAVTMIERNPDLAYAIPKEGSNKWFDAIAIPKNAK-HKEN--AEKFINFLCDP 292
Query: 98 SMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
+ + P T+ L LPE++ K P E L CE
Sbjct: 293 ENAEQNVEYIGYSTPNTAAYDL------LPEDIRDDK--------VAYPDEESLKNCE 336
>gi|319787665|ref|YP_004147140.1| family 1 extracellular solute-binding protein [Pseudoxanthomonas
suwonensis 11-1]
gi|317466177|gb|ADV27909.1| extracellular solute-binding protein family 1 [Pseudoxanthomonas
suwonensis 11-1]
Length = 374
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 39 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRA 88
+AVGWS D++ A R NVA +PK GA W D+ AIPA ++ H N A
Sbjct: 244 LAVGWSGDIIQARDRAEEAENGVNVAYSIPKEGAPQWFDMLAIPADAK-HPENAYA 298
>gi|170747368|ref|YP_001753628.1| extracellular solute-binding protein [Methylobacterium
radiotolerans JCM 2831]
gi|170653890|gb|ACB22945.1| extracellular solute-binding protein family 1 [Methylobacterium
radiotolerans JCM 2831]
Length = 375
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 9/65 (13%)
Query: 21 GVVKLYTLSE---AFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWAD 71
G V+ + SE A D+ +AVG+S D++ A +R ++A VVPK GA +W D
Sbjct: 224 GAVRKFHSSEYIQALANGDICLAVGYSGDIMQAKRRAEEAKNGIDIAYVVPKEGALMWFD 283
Query: 72 LWAIP 76
+AIP
Sbjct: 284 TFAIP 288
>gi|423300614|ref|ZP_17278639.1| hypothetical protein HMPREF1057_01780 [Bacteroides finegoldii
CL09T03C10]
gi|408472912|gb|EKJ91437.1| hypothetical protein HMPREF1057_01780 [Bacteroides finegoldii
CL09T03C10]
Length = 450
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 16/143 (11%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ + V V VVP+ G+++W D W IP ++ N RA+ + I
Sbjct: 256 WLNMTWSGDAIWAIEEANAVGVDLDYVVPEEGSNIWYDGWVIPKYAK----NPRAASYFI 311
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTLVKLPEELLKGKPSLGTDLIAGV-- 145
+ P + + F V +P LE TTL + P + I +
Sbjct: 312 NFMCRPDIALRNMDFCGYVSSVATPEILEEKQDTTLTYFSDLSYFFGPDADSIQIDKIQY 371
Query: 146 PPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 372 PDRKVVERCAMIRDFGDKTKEVL 394
>gi|392957073|ref|ZP_10322598.1| family 1 extracellular solute-binding protein [Bacillus macauensis
ZFHKF-1]
gi|391876975|gb|EIT85570.1| family 1 extracellular solute-binding protein [Bacillus macauensis
ZFHKF-1]
Length = 357
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 19/147 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
D + +GWS + + ++ V+PK G++LW D IP ++ K A Q+ +
Sbjct: 229 DASIGIGWSGNAAEIIDENPDLDYVIPKEGSNLWFDNMVIPKTAKNKKA---ALQFMNFM 285
Query: 95 IDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARC 154
+DP + E + +SP+ + L LP+E+ K PP +I +
Sbjct: 286 LDPK----VAAQNTEYVHYSSPN--KAALKYLPKEISTDK--------RFYPPKKITDQL 331
Query: 155 EFLEPLSEATFDVLRWLKFLRFYEKRK 181
E LS+ L FL F RK
Sbjct: 332 EVYRNLSQKDISYFNEL-FLEFKMHRK 357
>gi|18310953|ref|NP_562887.1| spermidine/putrescine ABC transporter [Clostridium perfringens str.
13]
gi|168212994|ref|ZP_02638619.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens CPE str. F4969]
gi|18145635|dbj|BAB81677.1| probable spermidine/putrescine ABC transporter [Clostridium
perfringens str. 13]
gi|170715466|gb|EDT27648.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens CPE str. F4969]
Length = 360
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 18/118 (15%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SISIDP 97
+AV WS D + ++R ++A +PK G++ W D AIP ++ HK N A ++ + DP
Sbjct: 236 LAVAWSGDAVTMIERNPDLAYAIPKEGSNKWFDAIAIPKNAK-HKEN--AEKFINFLCDP 292
Query: 98 SMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
+ + P T+ L LPE++ K P E L CE
Sbjct: 293 ENAEQNVEYIGYSTPNTAAYDL------LPEDIRDDK--------VAYPDEESLKNCE 336
>gi|403068806|ref|ZP_10910138.1| spermidine:putrescine ABC transporter [Oceanobacillus sp. Ndiop]
Length = 358
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 17/143 (11%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISIDPS 98
+AVGWS D + N+ VVP+ G++LW D + IP ++ N A+ I+
Sbjct: 233 IAVGWSGDARDIMWENENIDYVVPEEGSNLWFDNFVIPKTAQ----NVDAAHQFINF--M 286
Query: 99 MDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFLE 158
+D + E + ++P+ + L +PE+++ + P E+ R E E
Sbjct: 287 LDPEVAAQNTEYVSYSTPN--KEALKYMPEDMVNDE--------RFYPEPELTERLEVYE 336
Query: 159 PLSEATFDVLRWLKFLRFYEKRK 181
L + L FL+F RK
Sbjct: 337 NLGKQHLAYYNEL-FLQFKMYRK 358
>gi|154246279|ref|YP_001417237.1| extracellular solute-binding protein [Xanthobacter autotrophicus
Py2]
gi|154160364|gb|ABS67580.1| extracellular solute-binding protein family 1 [Xanthobacter
autotrophicus Py2]
Length = 368
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 11/56 (19%)
Query: 36 DVWVAVGWSSDVLPAVKRMS-----------NVAVVVPKSGASLWADLWAIPAASR 80
D+ +AVGWS DV A R + NVA V+PK GA +W D +AIP ++
Sbjct: 230 DICLAVGWSGDVFQAKTRAAEAAKKTKKPPVNVAYVIPKQGALMWFDNFAIPKDAK 285
>gi|399519023|ref|ZP_10759831.1| putrescine transport system substrate-binding protein [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399112847|emb|CCH36389.1| putrescine transport system substrate-binding protein [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 363
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
++ +A G+S DVL A R +A V+PK GA+LW D+ AIPA
Sbjct: 230 NICIAAGFSGDVLQAADRADEAGKGIEIAYVIPKEGANLWFDMMAIPA 277
>gi|331268532|ref|YP_004395024.1| extracellular solute-binding protein [Clostridium botulinum
BKT015925]
gi|329125082|gb|AEB75027.1| Bacterial extracellular solute-binding protein, putative
[Clostridium botulinum BKT015925]
Length = 347
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 18/132 (13%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISIDPS 98
+AV WS D + +K N+ V+PK G++LW D IP S HK + ++ I+
Sbjct: 225 IAVVWSGDAVTMMKNNPNLRYVIPKEGSNLWFDNMVIPKGS-AHK---KQAELFINF--- 277
Query: 99 MDRILLPFKQ-EVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFL 157
M R + K + I ++P+A T+ L E K A P E L +CE
Sbjct: 278 MTRPDISLKNVDYIGYSTPNA--KTMEMLDPETKNDK--------AAYPEDEKLKKCEVF 327
Query: 158 EPLSEATFDVLR 169
L + D R
Sbjct: 328 IDLGDFIKDYDR 339
>gi|387893506|ref|YP_006323803.1| periplasmic putrescine-binding protein [Pseudomonas fluorescens
A506]
gi|387164504|gb|AFJ59703.1| periplasmic putrescine-binding protein [Pseudomonas fluorescens
A506]
Length = 362
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
++ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 229 NICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|359792822|ref|ZP_09295616.1| family 1 extracellular solute-binding protein [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359251015|gb|EHK54425.1| family 1 extracellular solute-binding protein [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 366
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D+ +A+GWS DV A R + V V+PK GA +W D AIPA ++
Sbjct: 233 DICLAIGWSGDVFQARDRAAEADQGVVVDYVIPKEGAEMWFDQMAIPADAK 283
>gi|312960500|ref|ZP_07775007.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens WH6]
gi|311285234|gb|EFQ63808.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens WH6]
Length = 362
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
++ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 229 NICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKEGSNLWFDLLAIPA 276
>gi|118443532|ref|YP_877312.1| extracellular solute-binding protein [Clostridium novyi NT]
gi|118133988|gb|ABK61032.1| Bacterial extracellular solute-binding protein, putative
[Clostridium novyi NT]
Length = 347
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+AV WS D + +K N+ V+PK G++LW D IP S+ K
Sbjct: 225 IAVVWSGDAVTMMKNNKNLRYVIPKEGSNLWFDNMVIPKGSKHKK 269
>gi|402702656|ref|ZP_10850635.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas fragi A22]
Length = 364
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAAS 79
++ VA+G+S DV A K+ N+A +VPK G +LW D+ AIP S
Sbjct: 231 NICVAIGFSGDVFQAKARAEEAKKGVNIAYIVPKEGGALWFDMLAIPKDS 280
>gi|229590606|ref|YP_002872725.1| putative periplasmic putrescine-binding protein permease
[Pseudomonas fluorescens SBW25]
gi|229362472|emb|CAY49378.1| putative periplasmic putrescine-binding protein; permease protein
[Pseudomonas fluorescens SBW25]
Length = 359
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R N+ +PK GA++W D+ A+PA +
Sbjct: 218 YTADLANG--DICVAVGFSGDILQAESRAKEAKNGVNIGYNIPKEGAAIWFDMVAMPADA 275
Query: 80 RLHKTNW 86
K +
Sbjct: 276 PNEKAGY 282
>gi|427730105|ref|YP_007076342.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
gi|427366024|gb|AFY48745.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
Length = 360
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 16/127 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D+ +A+ +S+D + K + V+P+SG+SLW D IP ++ +I
Sbjct: 235 DLVLAMCYSADAIRVSKENPKLKYVIPRSGSSLWTDTMVIPKSAP-------------NI 281
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
D + I + E+ TS T ELL + DL PP +L +CE
Sbjct: 282 DGAYAWINFILQPEIAATTSQRLKIATPNSAGFELLPNQIKNNDDLF---PPNALLEKCE 338
Query: 156 FLEPLSE 162
+ PL +
Sbjct: 339 RISPLGQ 345
>gi|407789271|ref|ZP_11136373.1| polyamine transport protein [Gallaecimonas xiamenensis 3-C-1]
gi|407207249|gb|EKE77192.1| polyamine transport protein [Gallaecimonas xiamenensis 3-C-1]
Length = 416
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
D+ +A+G+S DVL A R V+ V+PK GA +W D+ AIP
Sbjct: 283 DICIAIGFSGDVLQAATRADEAKNGVQVSYVIPKEGAGMWFDMMAIP 329
>gi|395795861|ref|ZP_10475162.1| putative periplasmic putrescine-binding protein permease
[Pseudomonas sp. Ag1]
gi|421142696|ref|ZP_15602667.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens BBc6R8]
gi|395339982|gb|EJF71822.1| putative periplasmic putrescine-binding protein permease
[Pseudomonas sp. Ag1]
gi|404506147|gb|EKA20146.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens BBc6R8]
Length = 359
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R N+ +PK GA++W D+ A+PA +
Sbjct: 218 YTADLANG--DICVAVGFSGDILQAESRAKEAKNGVNIGYNIPKEGAAIWFDMVAMPADA 275
Query: 80 RLHKTNW 86
K +
Sbjct: 276 PDEKAGY 282
>gi|395496311|ref|ZP_10427890.1| putative periplasmic putrescine-binding protein permease
[Pseudomonas sp. PAMC 25886]
Length = 359
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R N+ +PK GA++W D+ A+PA +
Sbjct: 218 YTADLANG--DICVAVGFSGDILQAESRAKEAKNGVNIGYNIPKEGAAIWFDMVAMPADA 275
Query: 80 RLHKTNW 86
K +
Sbjct: 276 PDEKAGY 282
>gi|399001424|ref|ZP_10704138.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
gi|398127546|gb|EJM16953.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
Length = 219
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
++ VA G+S DV A R N+A +PK G++LW DL AIPA
Sbjct: 86 NICVAFGYSGDVFQAANRAKDAKNGVNIAYSIPKEGSNLWFDLLAIPA 133
>gi|383190431|ref|YP_005200559.1| spermidine/putrescine-binding periplasmic protein [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
gi|371588689|gb|AEX52419.1| spermidine/putrescine-binding periplasmic protein [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
Length = 369
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV+ A R NVA +PK GA + D++AIPA ++
Sbjct: 236 DICVAIGWAGDVMQAANRAKEAKNGVNVAYSIPKEGALAFFDVFAIPADAK 286
>gi|421165155|ref|ZP_15623497.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 700888]
gi|404542820|gb|EKA52128.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 700888]
Length = 365
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
++ VA G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 232 NICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAK 282
>gi|332705363|ref|ZP_08425441.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
gi|332355723|gb|EGJ35185.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
Length = 374
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
D+W+A+ +SSD + ++ V+PKSG+SLW D AIP
Sbjct: 249 DLWIAMCYSSDAAEIMAENPDLQYVLPKSGSSLWTDTLAIP 289
>gi|111226166|ref|YP_716960.1| ABC transporter substrate-binding protein [Frankia alni ACN14a]
gi|111153698|emb|CAJ65456.1| ABC-transporter polyamine-binding lipoprotein [Frankia alni ACN14a]
Length = 424
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 21 GVVKLY---TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
G+V+ Y + +A D+W+++ WS DV + +N+ VVP G LW D IP
Sbjct: 280 GIVRKYYDQSYIDALAGGDLWISMAWSGDVYQQIATGTNLKFVVPSEGGLLWTDNMCIP 338
>gi|163751564|ref|ZP_02158786.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella benthica KT99]
gi|161328572|gb|EDP99725.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella benthica KT99]
Length = 366
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S D+ A R ++ +PK GA+LW D+ AIPA ++
Sbjct: 233 DICVAFGYSGDIFQAAARAEEADNGQVISYAIPKEGANLWFDMLAIPADAK 283
>gi|15595498|ref|NP_248992.1| polyamine transporter [Pseudomonas aeruginosa PAO1]
gi|107099282|ref|ZP_01363200.1| hypothetical protein PaerPA_01000294 [Pseudomonas aeruginosa PACS2]
gi|116054027|ref|YP_788470.1| polyamine transport protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889041|ref|YP_002437905.1| polyamine transport protein [Pseudomonas aeruginosa LESB58]
gi|254243398|ref|ZP_04936720.1| polyamine transport protein [Pseudomonas aeruginosa 2192]
gi|296386794|ref|ZP_06876293.1| polyamine transport protein [Pseudomonas aeruginosa PAb1]
gi|313112088|ref|ZP_07797872.1| polyamine transport protein [Pseudomonas aeruginosa 39016]
gi|355646504|ref|ZP_09054459.1| hypothetical protein HMPREF1030_03545 [Pseudomonas sp. 2_1_26]
gi|386063282|ref|YP_005978586.1| polyamine transport protein [Pseudomonas aeruginosa NCGM2.S1]
gi|416878351|ref|ZP_11920375.1| polyamine transport protein [Pseudomonas aeruginosa 152504]
gi|418584347|ref|ZP_13148409.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418591159|ref|ZP_13155060.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P2]
gi|420136865|ref|ZP_14644878.1| polyamine transport protein [Pseudomonas aeruginosa CIG1]
gi|421157298|ref|ZP_15616680.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 25324]
gi|421172021|ref|ZP_15629801.1| polyamine transport protein [Pseudomonas aeruginosa CI27]
gi|421178211|ref|ZP_15635826.1| polyamine transport protein [Pseudomonas aeruginosa E2]
gi|421514913|ref|ZP_15961599.1| polyamine transport protein [Pseudomonas aeruginosa PAO579]
gi|424943286|ref|ZP_18359049.1| polyamine transport protein [Pseudomonas aeruginosa NCMG1179]
gi|451984064|ref|ZP_21932323.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
gi|9946146|gb|AAG03690.1|AE004468_2 polyamine transport protein [Pseudomonas aeruginosa PAO1]
gi|115589248|gb|ABJ15263.1| polyamine transport protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126196776|gb|EAZ60839.1| polyamine transport protein [Pseudomonas aeruginosa 2192]
gi|218769264|emb|CAW25024.1| polyamine transport protein [Pseudomonas aeruginosa LESB58]
gi|310884374|gb|EFQ42968.1| polyamine transport protein [Pseudomonas aeruginosa 39016]
gi|334838401|gb|EGM17123.1| polyamine transport protein [Pseudomonas aeruginosa 152504]
gi|346059732|dbj|GAA19615.1| polyamine transport protein [Pseudomonas aeruginosa NCMG1179]
gi|348031841|dbj|BAK87201.1| polyamine transport protein [Pseudomonas aeruginosa NCGM2.S1]
gi|354828463|gb|EHF12583.1| hypothetical protein HMPREF1030_03545 [Pseudomonas sp. 2_1_26]
gi|375045845|gb|EHS38418.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P1]
gi|375050052|gb|EHS42538.1| polyamine transport protein [Pseudomonas aeruginosa MPAO1/P2]
gi|403250363|gb|EJY63806.1| polyamine transport protein [Pseudomonas aeruginosa CIG1]
gi|404348641|gb|EJZ74978.1| polyamine transport protein [Pseudomonas aeruginosa PAO579]
gi|404538248|gb|EKA47791.1| polyamine transport protein [Pseudomonas aeruginosa CI27]
gi|404548541|gb|EKA57488.1| polyamine transport protein [Pseudomonas aeruginosa E2]
gi|404550731|gb|EKA59455.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 25324]
gi|451758300|emb|CCQ84846.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
Length = 365
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
++ VA G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 232 NICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAK 282
>gi|23100612|ref|NP_694079.1| spermidine:putrescine ABC transporter [Oceanobacillus iheyensis
HTE831]
gi|22778845|dbj|BAC15113.1| spermidine:putrescine ABC transporter spermidine:putrescine-binding
protein [Oceanobacillus iheyensis HTE831]
Length = 358
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 17/143 (11%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISIDPS 98
+A+GWS D + + +VP+ G++LW D + IP +R N + I+
Sbjct: 233 IAIGWSGDAADIMGENEAIDYLVPEEGSNLWFDNFVIPKTAR----NIDGAHQFINF--M 286
Query: 99 MDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFLE 158
+D + E + ++P+ + L +PEE+++ + P E+ R E E
Sbjct: 287 LDAEIAAQNTEYVSYSTPN--KEALQFMPEEMVEDE--------RFYPDPELTDRLEVYE 336
Query: 159 PLSEATFDVLRWLKFLRFYEKRK 181
L + L FL+F RK
Sbjct: 337 NLGQRNLAFYNEL-FLQFKMYRK 358
>gi|284047717|ref|YP_003398056.1| extracellular solute-binding protein [Acidaminococcus fermentans
DSM 20731]
gi|283951938|gb|ADB46741.1| extracellular solute-binding protein family 1 [Acidaminococcus
fermentans DSM 20731]
Length = 353
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+L + F + W+ WS D + + N+ V+PK G +WAD AIP ++ HK
Sbjct: 218 SLKQKFIAEEGWIGTMWSGDASFSYRENPNLGFVIPKEGTLVWADTLAIPKGAK-HK 273
>gi|77461625|ref|YP_351132.1| extracellular solute-binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77385628|gb|ABA77141.1| putrescine ABC transport system, substrate-binding periplasmic
protein precursor [Pseudomonas fluorescens Pf0-1]
Length = 375
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
D+ VA+G+S D+ A R N+A +PK G +LW D+ AIP S
Sbjct: 242 DICVAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 291
>gi|386056365|ref|YP_005972887.1| polyamine transport protein [Pseudomonas aeruginosa M18]
gi|392981709|ref|YP_006480296.1| polyamine transport protein [Pseudomonas aeruginosa DK2]
gi|419756621|ref|ZP_14282967.1| polyamine transport protein [Pseudomonas aeruginosa PADK2_CF510]
gi|421151364|ref|ZP_15610979.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 14886]
gi|347302671|gb|AEO72785.1| polyamine transport protein [Pseudomonas aeruginosa M18]
gi|384396994|gb|EIE43411.1| polyamine transport protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392317214|gb|AFM62594.1| polyamine transport protein [Pseudomonas aeruginosa DK2]
gi|404527401|gb|EKA37562.1| polyamine transport protein [Pseudomonas aeruginosa ATCC 14886]
gi|453045675|gb|EME93393.1| polyamine transport protein [Pseudomonas aeruginosa PA21_ST175]
Length = 365
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
++ VA G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 232 NICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAK 282
>gi|254237466|ref|ZP_04930789.1| polyamine transport protein [Pseudomonas aeruginosa C3719]
gi|126169397|gb|EAZ54908.1| polyamine transport protein [Pseudomonas aeruginosa C3719]
Length = 365
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
++ VA G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 232 NICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAK 282
>gi|398871289|ref|ZP_10626605.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398206544|gb|EJM93307.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 365
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
D+ VA+G+S D+ A R N+A +PK G +LW D+ AIP S
Sbjct: 232 DICVAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|392945801|ref|ZP_10311443.1| spermidine/putrescine-binding periplasmic protein [Frankia sp. QA3]
gi|392289095|gb|EIV95119.1| spermidine/putrescine-binding periplasmic protein [Frankia sp. QA3]
Length = 423
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 21 GVVKLY---TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
G+V+ Y + +A D+W+++ WS DV + +N+ VVP G LW D IP
Sbjct: 279 GIVRKYYDQSYIDALAGGDLWISMAWSGDVYQQIATGTNLKFVVPAEGGLLWTDNMCIP 337
>gi|152989077|ref|YP_001345787.1| polyamine transport protein [Pseudomonas aeruginosa PA7]
gi|452878415|ref|ZP_21955626.1| polyamine transport protein [Pseudomonas aeruginosa VRFPA01]
gi|150964235|gb|ABR86260.1| polyamine transport protein [Pseudomonas aeruginosa PA7]
gi|452184919|gb|EME11937.1| polyamine transport protein [Pseudomonas aeruginosa VRFPA01]
Length = 365
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
++ VA G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 232 NICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAK 282
>gi|424925503|ref|ZP_18348864.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404306663|gb|EJZ60625.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 365
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
D+ VA+G+S D+ A R N+A +PK G +LW D+ AIP S
Sbjct: 232 DICVAIGFSGDIFQAKHRAEEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|398975950|ref|ZP_10685976.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
gi|398139942|gb|EJM28930.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
Length = 365
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
D+ VA+G+S D+ A R N+A +PK G +LW D+ AIP S
Sbjct: 232 DICVAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|381352986|pdb|3TTL|A Chain A, Crystal Structure Of Apo-Spue
gi|381352987|pdb|3TTL|B Chain B, Crystal Structure Of Apo-Spue
Length = 340
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
++ VA G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 210 NICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAK 260
>gi|408481912|ref|ZP_11188131.1| putative periplasmic putrescine-binding protein permease
[Pseudomonas sp. R81]
Length = 359
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
YT A G D+ VAVG+S D+L A R N+ +PK GA++W D+ A+PA
Sbjct: 218 YTADLANG--DICVAVGFSGDILQAESRAKEAKNGVNIGYNIPKEGAAIWFDMVAMPA 273
>gi|426412094|ref|YP_007032193.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
gi|426270311|gb|AFY22388.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
Length = 365
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
D+ VA+G+S D+ A R N+A +PK G +LW D+ AIP S
Sbjct: 232 DICVAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|429333574|ref|ZP_19214268.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
gi|428761774|gb|EKX83994.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
Length = 361
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DVL A R +A +PK G++LW DL AIPA ++
Sbjct: 228 DICVAFGFSGDVLQAANRAREAGNGVKIAYSIPKEGSNLWFDLIAIPADAK 278
>gi|398878302|ref|ZP_10633427.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
gi|398882495|ref|ZP_10637462.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398198647|gb|EJM85601.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398200559|gb|EJM87470.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
Length = 365
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
D+ +A+G+S D+ A R + N+A +PK G +LW D+ AIP S
Sbjct: 232 DICIAIGFSGDMFQARNRAAEAKKGVNIAYTIPKEGGALWFDMLAIPKDS 281
>gi|251789985|ref|YP_003004706.1| putrescine ABC transporter subunit periplasmic-binding protein
[Dickeya zeae Ech1591]
gi|247538606|gb|ACT07227.1| extracellular solute-binding protein family 1 [Dickeya zeae
Ech1591]
Length = 369
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 36/131 (27%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA+GW+ DV+ A R N++ +PK GA + D++AIP ++
Sbjct: 236 DICVAIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDVFAIPKDAK--------- 286
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTS-------PSALETTLVKLPEELLKGKPSLGTDLI 142
++D + + K EVI S P+ T LVK + ++ P++
Sbjct: 287 ----NLDSAYQFLNYLLKPEVIANVSNHVYYANPNKEATALVK---DEVRNNPNI----- 334
Query: 143 AGVPPAEILAR 153
PPA+I A+
Sbjct: 335 --YPPADIRAK 343
>gi|168185699|ref|ZP_02620334.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum C str. Eklund]
gi|169296261|gb|EDS78394.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum C str. Eklund]
Length = 347
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+AV WS D + +K N+ V+PK G++LW D IP ++ K
Sbjct: 225 IAVVWSGDAVTMMKNNKNLKYVIPKEGSNLWFDNMVIPKGTKHKK 269
>gi|104781971|ref|YP_608469.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas entomophila L48]
gi|95110958|emb|CAK15676.1| putative putrescine ABC transporter, periplasmic putrescine-binding
protein [Pseudomonas entomophila L48]
Length = 362
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
DV +A G+S DVL A R VA +PK G++LW DL AIP ++
Sbjct: 229 DVCIAFGYSGDVLQAAHRAEEAGNGVKVAYSIPKEGSNLWFDLLAIPKDAK 279
>gi|296126547|ref|YP_003633799.1| ABC transporter substrate-binding protein [Brachyspira murdochii
DSM 12563]
gi|296018363|gb|ADG71600.1| extracellular solute-binding protein family 1 [Brachyspira
murdochii DSM 12563]
Length = 409
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 22 VVKLYTLSEA-FGIRD--VWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
VV+ Y + E + IRD ++ V + D L +K+ +N+ V+PKSG + + + AIP
Sbjct: 233 VVQDYVMDEILYKIRDEKAYIGVTYGGDALTVIKQNTNINFVIPKSGGNPFVECLAIP 290
>gi|86605920|ref|YP_474683.1| polyamine ABC transporter polyamine-binding protein [Synechococcus
sp. JA-3-3Ab]
gi|86554462|gb|ABC99420.1| polyamine ABC transporter, polyamine-binding protein [Synechococcus
sp. JA-3-3Ab]
Length = 374
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTN 85
D WVAVGWS D+ + V +P SG+++W D+W P R H +
Sbjct: 242 DSWVAVGWSQDLYATQANYPELEVAIPASGSAIWWDVWVRP--HRAHNAS 289
>gi|254500570|ref|ZP_05112721.1| Bacterial extracellular solute-binding protein, putative [Labrenzia
alexandrii DFL-11]
gi|222436641|gb|EEE43320.1| Bacterial extracellular solute-binding protein, putative [Labrenzia
alexandrii DFL-11]
Length = 359
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
A D+ +AVGWS DVL A R + V +PK GA +W D AIPA ++
Sbjct: 220 NALANGDICLAVGWSGDVLQARDRAAEADNGVTVEYAIPKEGALMWFDQMAIPADAK 276
>gi|388468123|ref|ZP_10142333.1| periplasmic putrescine-binding protein [Pseudomonas synxantha
BG33R]
gi|388011703|gb|EIK72890.1| periplasmic putrescine-binding protein [Pseudomonas synxantha
BG33R]
Length = 366
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
++ VA G+S DV A R N+A +P+ G++LW DL AIPA
Sbjct: 233 NICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPREGSNLWFDLLAIPA 280
>gi|307130758|ref|YP_003882774.1| putrescine ABC transporter substrate-binding protein [Dickeya
dadantii 3937]
gi|306528287|gb|ADM98217.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Dickeya dadantii 3937]
Length = 369
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 36/131 (27%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA+GW+ DV+ A R N++ +PK GA + D++AIP ++
Sbjct: 236 DICVAIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDVFAIPKDAK--------- 286
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTS-------PSALETTLVKLPEELLKGKPSLGTDLI 142
++D + + K +VI S P+ T LVK E ++ P++
Sbjct: 287 ----NLDSAYQFLNYLLKPDVIANVSNHVYYANPNKEATALVK---EEVRNNPNI----- 334
Query: 143 AGVPPAEILAR 153
PPA+I A+
Sbjct: 335 --YPPADIRAK 343
>gi|295083808|emb|CBK65331.1| Spermidine/putrescine-binding periplasmic protein [Bacteroides
xylanisolvens XB1A]
Length = 443
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ V V VPK G+++W D W IP +R N A+ + I
Sbjct: 249 WLNMTWSGDAIWAIEEADAVGVDLDYEVPKEGSNIWYDGWVIPKYAR----NPEAASYFI 304
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTLV---KLPEELLKGKPSLGTDLIAG 144
+ P + + F V +P LE TTL L G S+ D I
Sbjct: 305 NFMCRPDIALRNMDFCGYVSSIATPEILEEKIDTTLTYFSDLSYFFGPGTDSIQIDKIQ- 363
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 364 YPDRKVVERCAMIRDFGDKTKEVL 387
>gi|227825012|ref|ZP_03989844.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|352683976|ref|YP_004895960.1| hypothetical protein Acin_0580 [Acidaminococcus intestini RyC-MR95]
gi|226905511|gb|EEH91429.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|350278630|gb|AEQ21820.1| conserved hypothetical protein [Acidaminococcus intestini RyC-MR95]
Length = 353
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
++ + F + W+ + WS D +V V+PK G ++WAD AIP ++ HK
Sbjct: 218 SIKQKFIAEEAWIGMMWSGDAHFVHNDNPDVGFVIPKEGTTVWADTLAIPKGAK-HK 273
>gi|406914562|gb|EKD53729.1| hypothetical protein ACD_60C00159G0009 [uncultured bacterium]
Length = 343
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 35 RDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSIS 94
D V + W+ D+ A K N+A ++PK G LW D +AIP + + ++ + +
Sbjct: 215 EDANVGMAWNGDLYKAKKENDNLAFILPKDGFVLWIDNFAIPKNAPHRENAYKFLNFMLR 274
Query: 95 IDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARC 154
D + K + P+ LPE+ ++ P + P E L R
Sbjct: 275 ADVA--------KAVSLSNNFPTPNLAAQKSLPED-IRANPII-------YPSKETLRRG 318
Query: 155 EFLEPLSEATFDVLRWLKFLRFYEKRKM 182
E ++++ ++ + +++EK KM
Sbjct: 319 EIERDVNDSALEL-----YEKYWEKLKM 341
>gi|381352990|pdb|3TTN|A Chain A, Crystal Structures Of Polyamine Receptors Spud And Spue
From Pseudomonas Aeruginosa
gi|381352991|pdb|3TTN|B Chain B, Crystal Structures Of Polyamine Receptors Spud And Spue
From Pseudomonas Aeruginosa
Length = 340
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
++ VA G+S DV A R ++ V+PK GA+LW DL AIPA ++
Sbjct: 210 NICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLXAIPADAK 260
>gi|393788493|ref|ZP_10376621.1| hypothetical protein HMPREF1068_02901 [Bacteroides nordii
CL02T12C05]
gi|392655110|gb|EIY48755.1| hypothetical protein HMPREF1068_02901 [Bacteroides nordii
CL02T12C05]
Length = 445
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 24/147 (16%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ V V VVPK G+++W D W IP +R N +A+ + I
Sbjct: 250 WINMTWSGDAMWAIEEAEAVGVGLDYVVPKEGSNIWYDGWVIPKYAR----NPKAASYFI 305
Query: 94 SIDPSMDRILLPFKQEVIPG-----TSPSALE----TTLV---KLPEELLKGKPSLGTDL 141
+ M R + + G SP +E TTL L G S+ +
Sbjct: 306 NF---MCRPDIAIRNMDACGYVSSIASPEIMEEKIDTTLTYYSDLSYFFGSGADSIQINR 362
Query: 142 IAGVPPAEILARCEFLEPLSEATFDVL 168
I P ++ RC + + T +VL
Sbjct: 363 IQ-YPDRSVVERCAMIRDFGDKTKEVL 388
>gi|339006887|ref|ZP_08639462.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
laterosporus LMG 15441]
gi|421873293|ref|ZP_16304907.1| bacterial extracellular solute-binding family protein
[Brevibacillus laterosporus GI-9]
gi|338776096|gb|EGP35624.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
laterosporus LMG 15441]
gi|372457619|emb|CCF14456.1| bacterial extracellular solute-binding family protein
[Brevibacillus laterosporus GI-9]
Length = 349
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 27 TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
T+ + F + W+ WS D +++ VVPK G +++AD +AIP ++ K
Sbjct: 214 TIKQKFIAEEAWIGTVWSGDAAFIYPENNDIGYVVPKEGGTIFADTFAIPKGAKHKK 270
>gi|298483868|ref|ZP_07002039.1| spermidine/putrescine ABC transporter [Bacteroides sp. D22]
gi|298269928|gb|EFI11518.1| spermidine/putrescine ABC transporter [Bacteroides sp. D22]
Length = 443
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ V V VPK G+++W D W IP +R N A+ + I
Sbjct: 249 WLNMTWSGDAIWAIEEADAVGVDLDYEVPKEGSNIWYDGWVIPKYAR----NPEAASYFI 304
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTLV---KLPEELLKGKPSLGTDLIAG 144
+ P + + F V +P LE TTL L G S+ D I
Sbjct: 305 NFMCRPDIALRNMDFCGYVSSIATPEILEEKIDTTLTYFSDLSYFFGPGTDSIQIDKIQ- 363
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 364 YPDRKVVERCAMIRDFGDKTKEVL 387
>gi|336402706|ref|ZP_08583436.1| hypothetical protein HMPREF0127_00749 [Bacteroides sp. 1_1_30]
gi|335947779|gb|EGN09548.1| hypothetical protein HMPREF0127_00749 [Bacteroides sp. 1_1_30]
Length = 443
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ V V VPK G+++W D W IP +R N A+ + I
Sbjct: 249 WLNMTWSGDAIWAIEEADAVGVDLDYEVPKEGSNIWYDGWVIPKYAR----NPEAASYFI 304
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTLV---KLPEELLKGKPSLGTDLIAG 144
+ P + + F V +P LE TTL L G S+ D I
Sbjct: 305 NFMCRPDIALRNMDFCGYVSSIATPEILEEKIDTTLTYFSDLSYFFGPGTDSIQIDKIQ- 363
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 364 YPDRKVVERCAMIRDFGDKTKEVL 387
>gi|271963417|ref|YP_003337613.1| spermidine/putrescine-binding periplasmic protein-like protein
[Streptosporangium roseum DSM 43021]
gi|270506592|gb|ACZ84870.1| Spermidine/putrescine-binding periplasmic protein-like protein
[Streptosporangium roseum DSM 43021]
Length = 413
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
DVW+ + WS D+ V ++ VVP+ G ++W D IP ++
Sbjct: 273 DVWITMAWSGDIFQQVAEGKDLKFVVPEEGGTIWTDNMCIPKTAQ 317
>gi|110632525|ref|YP_672733.1| extracellular solute-binding protein [Chelativorans sp. BNC1]
gi|110283509|gb|ABG61568.1| extracellular solute-binding protein, family 1 [Chelativorans sp.
BNC1]
Length = 365
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
D+ VAVG+S DV A R + +A +PK GA +W D AIPA
Sbjct: 232 DICVAVGYSGDVFQARDRAAEAGQGVEIAYAIPKEGAQMWFDQMAIPA 279
>gi|312963723|ref|ZP_07778194.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens WH6]
gi|311281758|gb|EFQ60368.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens WH6]
Length = 364
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
++ VA G+S DV A R S N+A V+PK G +LW D+ AIP
Sbjct: 231 NICVAAGFSGDVFQAKARASEAGKGVNIAYVIPKEGGNLWFDVLAIP 277
>gi|388543373|ref|ZP_10146664.1| extracellular solute-binding protein [Pseudomonas sp. M47T1]
gi|388278685|gb|EIK98256.1| extracellular solute-binding protein [Pseudomonas sp. M47T1]
Length = 362
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
++ VA G+S DV A R ++A +PK GA+LW DL AIPA
Sbjct: 229 NICVAFGYSGDVFQAANRAKEAKNGIHIAYAIPKEGANLWFDLLAIPA 276
>gi|398868530|ref|ZP_10623927.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398232984|gb|EJN18932.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 365
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
D+ VA+G+S D+ A R + N+A +PK G +LW D+ AIP S
Sbjct: 232 DICVAIGFSGDMFQARNRAAEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|357385895|ref|YP_004900619.1| putrescine ABC transporter putrescine-binding protein PotF
[Pelagibacterium halotolerans B2]
gi|351594532|gb|AEQ52869.1| putrescine ABC transporter putrescine-binding protein PotF
[Pelagibacterium halotolerans B2]
Length = 363
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
++ +AVG+S DV A R + +A V+P+ GASLW D+ AIPA
Sbjct: 230 EICLAVGYSGDVFIAADRAAEAGQGVEIAYVIPEEGASLWFDMMAIPA 277
>gi|430002217|emb|CCF17998.1| Putrescine-binding periplasmic protein [Rhizobium sp.]
Length = 365
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D +++GWS DVL A R NV V+PK G +W D AIPA ++
Sbjct: 232 DTCISMGWSGDVLQAKARAEEAGNGVNVEYVIPKEGTYMWFDNLAIPADAK 282
>gi|260432277|ref|ZP_05786248.1| putrescine-binding periplasmic protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416105|gb|EEX09364.1| putrescine-binding periplasmic protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 361
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
D+ VAVGWS DVL A R +A PK GA +W D AIP
Sbjct: 228 DICVAVGWSGDVLQARDRADEADNGVTIAYHAPKEGAQMWFDQMAIP 274
>gi|78358712|ref|YP_390161.1| ABC transporter substrate-binding protein [Desulfovibrio alaskensis
G20]
gi|78221117|gb|ABB40466.1| extracellular solute-binding protein family 1 [Desulfovibrio
alaskensis G20]
Length = 348
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 20 YGVVKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
Y V+++ ++ +AF +V + + W+ D + M N+ + P+ GA LW D IP
Sbjct: 203 YPSVRVFDVTATKQAFASEEVIIGMSWNGDATVLTQEMPNLQYIYPREGAPLWLDSLCIP 262
Query: 77 AASRLHKTN 85
+ HK N
Sbjct: 263 KNAE-HKDN 270
>gi|271500855|ref|YP_003333880.1| family 1 extracellular solute-binding protein [Dickeya dadantii
Ech586]
gi|270344410|gb|ACZ77175.1| extracellular solute-binding protein family 1 [Dickeya dadantii
Ech586]
Length = 369
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 36/131 (27%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA+GW+ DV+ A R N++ +PK GA + D++AIP ++
Sbjct: 236 DICVAIGWAGDVMQAANRAKEAKNGVNISYSIPKEGALAFFDVFAIPKDAK--------- 286
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTS-------PSALETTLVKLPEELLKGKPSLGTDLI 142
++D + + K EVI S P+ T LVK + ++ P++
Sbjct: 287 ----NLDSAYQFLNYLLKPEVIANISNHVYYANPNKEATALVK---DDVRNNPNI----- 334
Query: 143 AGVPPAEILAR 153
PPA+I A+
Sbjct: 335 --YPPADIRAK 343
>gi|238751802|ref|ZP_04613289.1| Putrescine-binding periplasmic protein [Yersinia rohdei ATCC 43380]
gi|238709931|gb|EEQ02162.1| Putrescine-binding periplasmic protein [Yersinia rohdei ATCC 43380]
Length = 369
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ D+L A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAVGWAGDILQASNRAKEANNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|423214030|ref|ZP_17200559.1| hypothetical protein HMPREF1074_02091 [Bacteroides xylanisolvens
CL03T12C04]
gi|392693373|gb|EIY86607.1| hypothetical protein HMPREF1074_02091 [Bacteroides xylanisolvens
CL03T12C04]
Length = 443
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ V V VPK G+++W D W IP +R N A+ + I
Sbjct: 249 WLNMTWSGDAIWAIEEADAVGVDLDYEVPKEGSNIWYDGWVIPKYAR----NPEAASYFI 304
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTLV---KLPEELLKGKPSLGTDLIAG 144
+ P + + F V +P LE TTL L G S+ D I
Sbjct: 305 NFMCRPDIALRNMDFCGYVSSIATPEILEEKIDTTLTYFSDLSYFFGPGADSIQIDKIQ- 363
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 364 YPDRKVVERCAMIRDFGDKTKEVL 387
>gi|262406235|ref|ZP_06082784.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294810121|ref|ZP_06768792.1| bacterial extracellular solute-binding protein [Bacteroides
xylanisolvens SD CC 1b]
gi|345511153|ref|ZP_08790705.1| spermidine/putrescine ABC transporter [Bacteroides sp. D1]
gi|229446389|gb|EEO52180.1| spermidine/putrescine ABC transporter [Bacteroides sp. D1]
gi|262354938|gb|EEZ04029.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294442725|gb|EFG11521.1| bacterial extracellular solute-binding protein [Bacteroides
xylanisolvens SD CC 1b]
Length = 443
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ V V VPK G+++W D W IP +R N A+ + I
Sbjct: 249 WLNMTWSGDAIWAIEEADAVGVDLDYEVPKEGSNIWYDGWVIPKYAR----NPEAASYFI 304
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTLV---KLPEELLKGKPSLGTDLIAG 144
+ P + + F V +P LE TTL L G S+ D I
Sbjct: 305 NFMCRPDIALRNMDFCGYVSSIATPEILEEKIDTTLTYFSDLSYFFGPGADSIQIDKIQ- 363
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 364 YPDRKVVERCAMIRDFGDKTKEVL 387
>gi|120599867|ref|YP_964441.1| extracellular solute-binding protein [Shewanella sp. W3-18-1]
gi|146292197|ref|YP_001182621.1| extracellular solute-binding protein [Shewanella putrefaciens
CN-32]
gi|386312872|ref|YP_006009037.1| ABC polyamine transporter, periplasmic ligand-binding subunit, PotF
[Shewanella putrefaciens 200]
gi|120559960|gb|ABM25887.1| extracellular solute-binding protein, family 1 [Shewanella sp.
W3-18-1]
gi|145563887|gb|ABP74822.1| extracellular solute-binding protein, family 1 [Shewanella
putrefaciens CN-32]
gi|319425497|gb|ADV53571.1| ABC polyamine transporter, periplasmic ligand-binding subunit, PotF
[Shewanella putrefaciens 200]
Length = 366
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R + + +PK GA+LW D+ AIPA ++
Sbjct: 233 DICVAYGFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPADAK 283
>gi|398992661|ref|ZP_10695625.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398136670|gb|EJM25751.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 365
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
D+ +A+G+S D+ A R NVA +PK G +LW D+ AIP S
Sbjct: 232 DICIAIGFSGDMFQAKARAEEAGKGVNVAYTIPKEGGALWFDMLAIPKDS 281
>gi|255691431|ref|ZP_05415106.1| spermidine/putrescine ABC transporter [Bacteroides finegoldii DSM
17565]
gi|260622818|gb|EEX45689.1| ABC transporter, solute-binding protein [Bacteroides finegoldii DSM
17565]
Length = 450
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 16/143 (11%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ + V V VVP+ G+++W D W IP ++ N +A+ + I
Sbjct: 256 WLNMTWSGDAIWAIEEANAVGVDLDYVVPEEGSNIWYDGWVIPKYAK----NPKAASYFI 311
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTLVKLPEELLKGKPSLGTDLIAGV-- 145
+ P + + F V +P LE TTL + P + I +
Sbjct: 312 NFMCRPDIALRNMDFCGYVSSVATPEILEEKQDTTLTYFSDLSYFFGPDADSIQIDKIQY 371
Query: 146 PPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 372 PDRKVVERCAMIRDFGDKTKEVL 394
>gi|330501319|ref|YP_004378188.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
gi|328915605|gb|AEB56436.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
Length = 363
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 79
++ VA G+S D+L A R +A +PK GA+LW D+ AIPA S
Sbjct: 230 NICVAAGFSGDILQAADRAEEAGKGIEIAYSIPKEGANLWFDMMAIPADS 279
>gi|414075947|ref|YP_006995265.1| ABC-type spermidine/putrescine transport system periplasmic binding
component [Anabaena sp. 90]
gi|413969363|gb|AFW93452.1| ABC-type spermidine/putrescine transport system periplasmic binding
component [Anabaena sp. 90]
Length = 360
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 26/144 (18%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D+ VA+ +S+D + + + V+P+SG+SLW D IP ++ +I
Sbjct: 236 DLAVAMCYSADAVKICQENPKLKFVIPRSGSSLWTDTIVIPKSNP-------------NI 282
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
+ I L + EV S +T + E L T+L PP +LA+CE
Sbjct: 283 AGAYAWINLILQPEVAAKISERLYISTPSRAGFEQLPKAIQENTNLF---PPQSLLAKCE 339
Query: 156 FLEPLSEATFDVLRWLKFLRFYEK 179
L PL KF YE+
Sbjct: 340 RLTPLG----------KFEEIYER 353
>gi|322833214|ref|YP_004213241.1| extracellular solute-binding protein [Rahnella sp. Y9602]
gi|384258392|ref|YP_005402326.1| putrescine ABC transporter periplasmic-binding protein [Rahnella
aquatilis HX2]
gi|321168415|gb|ADW74114.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602]
gi|380754368|gb|AFE58759.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Rahnella aquatilis HX2]
Length = 369
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV+ A R NVA +PK GA + D++AIPA ++
Sbjct: 236 DICVAIGWAGDVMQAGNRAKEAKNGVNVAYSIPKEGALAFFDVFAIPADAK 286
>gi|422642389|ref|ZP_16705807.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae Cit 7]
gi|440745316|ref|ZP_20924611.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP39023]
gi|330954771|gb|EGH55031.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae Cit 7]
gi|440372683|gb|ELQ09469.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP39023]
Length = 364
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKSRAEEAGKGVKIAYSIPKEGGNLWFDMLAIPADSK 281
>gi|398964440|ref|ZP_10680291.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398148371|gb|EJM37051.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 361
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R ++ +PK GA++W D+ A+PA +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAKEAKNGIDIGYAIPKEGAAIWFDMVAMPADA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|222147628|ref|YP_002548585.1| ABC transporter substrate binding protein (putrescine)
[Agrobacterium vitis S4]
gi|221734616|gb|ACM35579.1| ABC transporter substrate binding protein (putrescine)
[Agrobacterium vitis S4]
Length = 371
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D+ +GWS DV+ A KR +A V+PK G +W D AIPA ++
Sbjct: 238 DICATIGWSGDVIQAKKRAEEAKNGVEIAYVIPKEGTYMWFDNLAIPADAK 288
>gi|304415318|ref|ZP_07396003.1| periplasmic-binding component of putrescine ABC transporter
[Candidatus Regiella insecticola LSR1]
gi|304282836|gb|EFL91314.1| periplasmic-binding component of putrescine ABC transporter
[Candidatus Regiella insecticola LSR1]
Length = 379
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ D++ A R+ N+A +PK GA + D++A+PA ++
Sbjct: 246 DICVAVGWNGDIVQAANRIKEANNGVNIAYSIPKEGALVTFDVFAMPADAK 296
>gi|383777608|ref|YP_005462174.1| putative ABC transporter substrate-binding protein [Actinoplanes
missouriensis 431]
gi|381370840|dbj|BAL87658.1| putative ABC transporter substrate-binding protein [Actinoplanes
missouriensis 431]
Length = 416
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 21 GVVKLY---TLSEAFGIRDVWVAVGWSSDVLPA-VKRMSNVAVVVPKSGASLWADLWAIP 76
G+V+ Y +A G +VW+ WS D+ + +N+ V+P+ G ++W D +AIP
Sbjct: 256 GIVRQYYEQDYVDALGNGEVWITQAWSGDIFQKNLSDGTNLKFVIPEEGGTIWTDNFAIP 315
>gi|448747704|ref|ZP_21729359.1| Bacterial periplasmic spermidine/putrescine-binding protein
[Halomonas titanicae BH1]
gi|445564647|gb|ELY20764.1| Bacterial periplasmic spermidine/putrescine-binding protein
[Halomonas titanicae BH1]
Length = 369
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S D+ A R +A +PK GA+LW D+ A+PA
Sbjct: 236 DICVAAGYSGDIFQAADRAEEAGRDFTIAYSIPKEGAALWFDMMAVPA 283
>gi|398985820|ref|ZP_10691253.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399014254|ref|ZP_10716547.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398111488|gb|EJM01371.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398153558|gb|EJM42056.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 361
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R ++ +PK GA++W D+ A+PA +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAKEAKNGVDIGYAIPKEGAAIWFDMVAMPADA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|354597990|ref|ZP_09016007.1| extracellular solute-binding protein family 1 [Brenneria sp.
EniD312]
gi|353675925|gb|EHD21958.1| extracellular solute-binding protein family 1 [Brenneria sp.
EniD312]
Length = 369
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 30/128 (23%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA+GW+ DV+ A R NV +PK GA + D++A+PA ++
Sbjct: 236 DICVAIGWAGDVMQAANRAKEAKNGVNVHYSIPKEGALAFFDVFAVPADAK--------- 286
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSP----SALETTLVKLPEELLKGKPSLGTDLIAGV 145
+ID + + + K +VI S ++ V L E ++ P +
Sbjct: 287 ----NIDAAYEFLNYLLKPDVIANISNHVYYASANKEAVPLVNEEIRNDPGI-------Y 335
Query: 146 PPAEILAR 153
PPA++ A+
Sbjct: 336 PPADVRAK 343
>gi|302189523|ref|ZP_07266196.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. syringae 642]
Length = 364
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKSRAEEAGKGVKIAYSIPKEGGNLWFDMLAIPADSK 281
>gi|372269532|ref|ZP_09505580.1| transcription factor jumonji, jmjC [Marinobacterium stanieri S30]
Length = 363
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 3 GIVGAIRSIQESSTKFWYGVVKLYTLSEAFGIRDVWVAVGWSSDVLPAVKRMSN------ 56
GI GA ++ Y Y A G D+ VA G+S DVL A R +
Sbjct: 199 GIAGASETVAAVRPHIRYFHSSQYINDLANG--DICVAHGYSGDVLQARDRAAEAGNGVE 256
Query: 57 VAVVVPKSGASLWADLWAIPA 77
+A VP GA +W D+ AIPA
Sbjct: 257 IAYAVPSEGALVWTDVMAIPA 277
>gi|218438208|ref|YP_002376537.1| family 1 extracellular solute-binding protein [Cyanothece sp. PCC
7424]
gi|218170936|gb|ACK69669.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC
7424]
Length = 359
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 16/130 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
+V +AV WS D+ ++ ++ +PK G+ +W D AI A + HK A Q+ +
Sbjct: 229 EVDIAVEWSGDIFQVMEENPDIRYTIPKEGSVIWVDTVAI-AKNSPHKD--TAEQFINFL 285
Query: 95 IDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARC 154
+P + + F + P + A+E L+ E+ LK PSL PP E+ +
Sbjct: 286 FEPEISAKVSNFIKYGTP--NKVAIEKGLIN--EKELK-NPSL-------YPPTEVFNKL 333
Query: 155 EFLEPLSEAT 164
+++ + EAT
Sbjct: 334 TYIKDVGEAT 343
>gi|307947450|ref|ZP_07662783.1| putrescine-binding periplasmic protein [Roseibium sp. TrichSKD4]
gi|307769268|gb|EFO28496.1| putrescine-binding periplasmic protein [Roseibium sp. TrichSKD4]
Length = 363
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
A D+ VAVGWS DVL A R + V +PK GA +W D A+PA
Sbjct: 224 NALANGDICVAVGWSGDVLQARDRAAEADNGVTVEYSIPKEGALMWFDQMAVPA 277
>gi|323142870|ref|ZP_08077582.1| putative putrescine-binding periplasmic protein [Succinatimonas
hippei YIT 12066]
gi|322417412|gb|EFY08034.1| putative putrescine-binding periplasmic protein [Succinatimonas
hippei YIT 12066]
Length = 377
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 18/110 (16%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
++ A+G+S D+L A KR + V PK G+ LW D W IPA + +K A
Sbjct: 232 EICAAIGYSGDILQADKRAIQANRDYRIKYVFPKEGSLLWFDCWTIPAGAENYKG---AH 288
Query: 90 QW-SISIDPSMD-------RILLPFKQEVIPGTSPSALETTLVKLPEELL 131
W + +DP + R +LP K + P V L ELL
Sbjct: 289 AWFNYLLDPQVAKSVSNEIRYILPVKG-AMDNLDPELSADPNVNLTPELL 337
>gi|117621460|ref|YP_858560.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117562867|gb|ABK39815.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 361
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S D+L A R +A +PK G +LW D+ AIPA
Sbjct: 228 DICVAAGFSGDILQAAARADEAGKGIKIAYSIPKEGGNLWFDMMAIPA 275
>gi|399911594|ref|ZP_10779908.1| extracellular solute-binding protein [Halomonas sp. KM-1]
Length = 367
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S D+ A R + ++PK GA+LW D+ AIPA
Sbjct: 234 DICVAAGYSGDIFQAADRAEEAGRDFTIDYIIPKEGAALWFDMMAIPA 281
>gi|393784280|ref|ZP_10372446.1| hypothetical protein HMPREF1071_03314 [Bacteroides salyersiae
CL02T12C01]
gi|392666320|gb|EIY59835.1| hypothetical protein HMPREF1071_03314 [Bacteroides salyersiae
CL02T12C01]
Length = 443
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 22/146 (15%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ V V VVP+ G+++W D W IP +R N +A+ + I
Sbjct: 249 WINMTWSGDAMWAIEEADAVGVDLDYVVPEEGSNIWYDGWVIPKYAR----NPQAASYFI 304
Query: 94 SIDPSMDRILLPFKQEVIPG-----TSPSALE----TTLVKLPEELLKGKPSLGTDLIAG 144
+ M R + + G SP +E TTL + P + I
Sbjct: 305 NF---MCRPDIAIRNMDACGYVSAIASPEIMEEKIDTTLTYYSDLSYFFGPDADSIQINR 361
Query: 145 V--PPAEILARCEFLEPLSEATFDVL 168
+ P ++ RC + + T DVL
Sbjct: 362 IQYPDRSVVERCAMIRDFGDKTKDVL 387
>gi|429210720|ref|ZP_19201886.1| extracellular solute-binding protein [Pseudomonas sp. M1]
gi|428158134|gb|EKX04681.1| extracellular solute-binding protein [Pseudomonas sp. M1]
Length = 365
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
++ VA G+S DV A R N+A +PK GA+LW D+ AIP
Sbjct: 232 NICVAAGFSGDVFQAANRAKEAGKGVNIAYAIPKEGANLWFDILAIP 278
>gi|407364945|ref|ZP_11111477.1| extracellular solute-binding protein [Pseudomonas mandelii JR-1]
Length = 361
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R ++ +PK GA++W D+ A+PA +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAKEAKNGIDIGYAIPKEGAAIWFDMVAMPADA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|359781793|ref|ZP_09285016.1| extracellular solute-binding protein [Pseudomonas psychrotolerans
L19]
gi|359370163|gb|EHK70731.1| extracellular solute-binding protein [Pseudomonas psychrotolerans
L19]
Length = 362
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 80
++ VA G+S DV A K+ N+ +PK GA+LW DL AIP ++
Sbjct: 229 NICVAFGYSGDVFQARSRAEEAKKGVNIGYAIPKEGANLWFDLLAIPKDAK 279
>gi|357417210|ref|YP_004930230.1| family 1 extracellular solute-binding protein [Pseudoxanthomonas
spadix BD-a59]
gi|355334788|gb|AER56189.1| family 1 extracellular solute-binding protein [Pseudoxanthomonas
spadix BD-a59]
Length = 381
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
+A D + VGWS DV+ A R +A +PK GA LW D+ AIP +R
Sbjct: 242 DAMANGDTCLVVGWSGDVIQARDRAEEAGNGVKIAYSIPKEGAPLWFDMLAIPKDAR 298
>gi|70733210|ref|YP_262983.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas protegens Pf-5]
gi|68347509|gb|AAY95115.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas protegens Pf-5]
Length = 364
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
++ VA+G+S DV A R + N+A +PK G +LW D+ AIP S
Sbjct: 231 NICVAIGFSGDVFQAKARAADAGKGVNIAYAIPKEGGALWFDMLAIPKDS 280
>gi|398908920|ref|ZP_10654281.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398188983|gb|EJM76268.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 365
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
D+ +A+G+S D+ A R + N+A +PK G +LW D+ AIP S
Sbjct: 232 DICIAIGFSGDMFQARNRAAEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|398839011|ref|ZP_10596261.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
gi|398113641|gb|EJM03485.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
Length = 365
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
D+ VA+G+S D+ A R + N+A +PK G +LW D+ AIP S
Sbjct: 232 DICVAIGFSGDMFQAKARAAEAGKGMNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|423277774|ref|ZP_17256688.1| hypothetical protein HMPREF1203_00905 [Bacteroides fragilis HMW
610]
gi|404586971|gb|EKA91530.1| hypothetical protein HMPREF1203_00905 [Bacteroides fragilis HMW
610]
Length = 444
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 24/147 (16%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D A++ V V VVP+ G+++W D W IP + N +A+ + I
Sbjct: 251 WLNMTWSGDAKWAIEEADAVGVELDYVVPREGSNIWYDGWVIPK----YAGNPKAASYFI 306
Query: 94 SIDPSMDRILLPFKQEVIPG-----TSPSALE----TTLV---KLPEELLKGKPSLGTDL 141
+ M R + + G SP +E TTL L G SL D
Sbjct: 307 NF---MCRPDIALRNMEASGYVSAVASPEIMEAKVDTTLTYYSDLSYFFGPGADSLQIDK 363
Query: 142 IAGVPPAEILARCEFLEPLSEATFDVL 168
I P E++ RC + + T +VL
Sbjct: 364 IQ-YPDREVVERCAMIRDFGDKTKEVL 389
>gi|424923232|ref|ZP_18346593.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304392|gb|EJZ58354.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 361
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R ++ +PK GA++W D+ A+PA +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAREAKNGIDIGYAIPKEGAAIWFDMVAMPADA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|398882631|ref|ZP_10637597.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398198298|gb|EJM85256.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
Length = 361
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R ++ +PK GA++W D+ A+PA +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAREAKNGVDIGYAIPKEGAAIWFDMVAMPADA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|398880690|ref|ZP_10635714.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
gi|398191664|gb|EJM78848.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
Length = 361
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R ++ +PK GA++W D+ A+PA +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAREAKNGVDIGYAIPKEGAAIWFDMVAMPADA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|386847569|ref|YP_006265582.1| Spermidine/putrescine-binding periplasmic protein [Actinoplanes sp.
SE50/110]
gi|359835073|gb|AEV83514.1| Spermidine/putrescine-binding periplasmic protein [Actinoplanes sp.
SE50/110]
Length = 416
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 21 GVVKLY---TLSEAFGIRDVWVAVGWSSDVLPA-VKRMSNVAVVVPKSGASLWADLWAIP 76
G+V+ Y +A G +VW+ WS DV + +N+ V+P+ G ++W D +AIP
Sbjct: 256 GIVRKYYEQDYVDALGKGEVWLTQAWSGDVFQKNLSDGTNLKFVIPQEGGTIWTDNFAIP 315
>gi|398928686|ref|ZP_10663639.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398168075|gb|EJM56101.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 365
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
D+ +A+G+S D+ A R + N+A +PK G +LW D+ AIP S
Sbjct: 232 DICIAIGFSGDMFQARNRAAEAKKGVNIAYSIPKEGGALWFDMLAIPKDS 281
>gi|242239712|ref|YP_002987893.1| putrescine ABC transporter periplasmic-binding protein [Dickeya
dadantii Ech703]
gi|242131769|gb|ACS86071.1| extracellular solute-binding protein family 1 [Dickeya dadantii
Ech703]
Length = 369
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 36/131 (27%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA+GW+ DV+ A R N++ +PK GA + D++AIP ++
Sbjct: 236 DICVAIGWAGDVMQAANRAKEAKNGVNISYAIPKEGALAFFDVFAIPKDAK--------- 286
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTS-------PSALETTLVKLPEELLKGKPSLGTDLI 142
++D + + K +VI S P+ T LV E ++G P++
Sbjct: 287 ----NLDEAYAFLNYLLKPDVIANISNHVYYANPNKEATALV---SEEVRGNPNI----- 334
Query: 143 AGVPPAEILAR 153
PPA++ A+
Sbjct: 335 --YPPADVRAK 343
>gi|440225582|ref|YP_007332673.1| putative putrescine ABC transporter, substrate-binding protein
[Rhizobium tropici CIAT 899]
gi|440037093|gb|AGB70127.1| putative putrescine ABC transporter, substrate-binding protein
[Rhizobium tropici CIAT 899]
Length = 365
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ +A G+S DVL A R + N+A +P GA +W D+ AIPA
Sbjct: 232 DICLAFGYSGDVLQARNRAAEAKNGVNIAYSIPTKGAQMWFDVMAIPA 279
>gi|308048856|ref|YP_003912422.1| extracellular solute-binding protein [Ferrimonas balearica DSM
9799]
gi|307631046|gb|ADN75348.1| extracellular solute-binding protein family 1 [Ferrimonas balearica
DSM 9799]
Length = 364
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ +AVGWS D+L A R + V+P+ G +W DL AIP +R
Sbjct: 231 DICLAVGWSGDILQAADRADEADNGITIEYVIPQEGTLVWFDLMAIPRDAR 281
>gi|24372851|ref|NP_716893.1| ABC-type putrescine uptake system substrate-binding component PotF
[Shewanella oneidensis MR-1]
gi|24346959|gb|AAN54338.1| ABC-type putrescine uptake system substrate-binding component PotF
[Shewanella oneidensis MR-1]
Length = 367
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 26/126 (20%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA G+S DV A R + + +PK GA+LW D+ AIPA + TN +
Sbjct: 234 DICVAYGFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPADA----TNVENA 289
Query: 90 QWSIS--IDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPP 147
I+ + P ++ P V +P+ L LV +E ++ P++ PP
Sbjct: 290 HKLINYLLRP---EVIAPISNYVA-YANPNDLAQPLV---DEAIRNDPAI-------YPP 335
Query: 148 AEILAR 153
E+L +
Sbjct: 336 KEVLDK 341
>gi|146305385|ref|YP_001185850.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
gi|421505531|ref|ZP_15952469.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
gi|145573586|gb|ABP83118.1| extracellular solute-binding protein, family 1 [Pseudomonas
mendocina ymp]
gi|400343940|gb|EJO92312.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
Length = 364
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 39/149 (26%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
++ A G+S DVL A R + ++PK G ++WADL AIP ++
Sbjct: 231 EICAAFGYSGDVLQAADRAEEAGRSDEIIYIIPKEGTAMWADLLAIPKDAK--------- 281
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTS-------PSALETTLVKLPEELLKGKPSLGTDLI 142
++D + I + +VI S P+ T LV +E ++ P +
Sbjct: 282 ----NVDEAHAFINYLLRPDVIAKISNYVAYANPNLKATELV---DEGVRENPGV----- 329
Query: 143 AGVPPAEILARCEFLEPLSEATFDVLRWL 171
P AE++A+ E E T +V RWL
Sbjct: 330 --YPSAEVMAKLYVAE---ERTPEVQRWL 353
>gi|220934438|ref|YP_002513337.1| transcription factor jumonji, JmjC [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995748|gb|ACL72350.1| transcription factor jumonji, JmjC [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 366
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVA------VVVPKSGASLWADLWAIPA 77
D+ VA G+S DV+ A R V ++P+ GA LW DL AIPA
Sbjct: 233 DICVAHGYSGDVIQARDRAEEVGRGVEIDYIIPREGAVLWFDLMAIPA 280
>gi|333898571|ref|YP_004472444.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333113836|gb|AEF20350.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 364
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 76
++ VA G+S DVL A R + +A +PK GA+LW D+ AIP
Sbjct: 231 NICVAFGYSGDVLQAADRAAEAGKGVEIAYAIPKEGANLWFDMLAIP 277
>gi|357026312|ref|ZP_09088415.1| family 1 extracellular solute-binding protein [Mesorhizobium
amorphae CCNWGS0123]
gi|355541823|gb|EHH10996.1| family 1 extracellular solute-binding protein [Mesorhizobium
amorphae CCNWGS0123]
Length = 365
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 30 EAFGIRDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPA 77
A D+ +AVGWS DV A K+ + VPK GA +W D AIPA
Sbjct: 226 NALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYAVPKEGAQMWFDQMAIPA 279
>gi|421505530|ref|ZP_15952468.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
gi|400343939|gb|EJO92311.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
Length = 363
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
++ VA G+S D+L A R +A +PK GA+LW D+ AIPA
Sbjct: 230 NICVAAGFSGDILQAADRAEEAGKGIEIAYAIPKEGANLWFDMLAIPA 277
>gi|197104670|ref|YP_002130047.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Phenylobacterium zucineum HLK1]
gi|196478090|gb|ACG77618.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Phenylobacterium zucineum HLK1]
Length = 366
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 76
EA D VAVG+S DVL A R + VVPK G+ +W D++AIP
Sbjct: 227 EALANGDACVAVGYSGDVLQAKARAQEAKTGVALGYVVPKEGSQVWFDVFAIP 279
>gi|123441805|ref|YP_001005789.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|420259064|ref|ZP_14761782.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|122088766|emb|CAL11571.1| putrescine-binding periplasmic protein precursor [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|404513431|gb|EKA27248.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 369
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ D++ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|146305386|ref|YP_001185851.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
gi|145573587|gb|ABP83119.1| extracellular solute-binding protein, family 1 [Pseudomonas
mendocina ymp]
Length = 363
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
++ VA G+S D+L A R +A +PK GA+LW D+ AIPA
Sbjct: 230 NICVAAGFSGDILQAADRAEEAGKGIEIAYAIPKEGANLWFDMLAIPA 277
>gi|238762095|ref|ZP_04623068.1| Putrescine-binding periplasmic protein [Yersinia kristensenii ATCC
33638]
gi|238699823|gb|EEP92567.1| Putrescine-binding periplasmic protein [Yersinia kristensenii ATCC
33638]
Length = 369
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ D++ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|254474316|ref|ZP_05087705.1| ABC transporter, polyamine transport protein, periplasmic protein
[Pseudovibrio sp. JE062]
gi|211956591|gb|EEA91802.1| ABC transporter, polyamine transport protein, periplasmic protein
[Pseudovibrio sp. JE062]
Length = 363
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
D+ +A GWS DVL A R + V ++P GA +W D AIPA
Sbjct: 230 DICLAYGWSGDVLQAADRAAEADKGVEVTYILPNEGAQMWFDQIAIPA 277
>gi|429330947|ref|ZP_19211721.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas putida CSV86]
gi|428764274|gb|EKX86415.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas putida CSV86]
Length = 364
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
D+ VA G+S DV A R +VA V+PK G +LW D+ AIP
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVDVAYVIPKEGGNLWFDMLAIP 277
>gi|160874318|ref|YP_001553634.1| extracellular solute-binding protein [Shewanella baltica OS195]
gi|378707564|ref|YP_005272458.1| extracellular solute-binding protein [Shewanella baltica OS678]
gi|160859840|gb|ABX48374.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS195]
gi|315266553|gb|ADT93406.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS678]
Length = 366
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAAS 79
D+ VA G+S DV A R + + +PK GA+LW D+ AIPA S
Sbjct: 233 DICVAFGFSGDVFQAKARAEEAGNGNKIGYSIPKEGANLWFDMLAIPADS 282
>gi|418935702|ref|ZP_13489464.1| extracellular solute-binding protein family 1 [Rhizobium sp.
PDO1-076]
gi|375057645|gb|EHS53807.1| extracellular solute-binding protein family 1 [Rhizobium sp.
PDO1-076]
Length = 366
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D+ V +GWS D+L A R + V+PK G +W D AIPA S+
Sbjct: 233 DICVTIGWSGDILQAKARAEEAKNGVEIEYVIPKEGTYMWFDNLAIPADSK 283
>gi|422648357|ref|ZP_16711480.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. maculicola str. ES4326]
gi|330961894|gb|EGH62154.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. maculicola str. ES4326]
Length = 364
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKSRAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|332162254|ref|YP_004298831.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|386307807|ref|YP_006003863.1| putrescine ABC transporter putrescine-binding protein PotF
[Yersinia enterocolitica subsp. palearctica Y11]
gi|418242130|ref|ZP_12868647.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433548238|ref|ZP_20504288.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Yersinia enterocolitica IP 10393]
gi|318606319|emb|CBY27817.1| putrescine ABC transporter putrescine-binding protein PotF
[Yersinia enterocolitica subsp. palearctica Y11]
gi|325666484|gb|ADZ43128.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860389|emb|CBX70699.1| putrescine-binding periplasmic protein [Yersinia enterocolitica
W22703]
gi|351778478|gb|EHB20631.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431790798|emb|CCO67328.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Yersinia enterocolitica IP 10393]
Length = 369
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ D++ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|418293170|ref|ZP_12905089.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064572|gb|EHY77315.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 361
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 79
++ VA G+S DV A R +A +PK GA+LW D+ AIPA S
Sbjct: 228 NICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGANLWFDMLAIPADS 277
>gi|113971253|ref|YP_735046.1| extracellular solute-binding protein [Shewanella sp. MR-4]
gi|117921535|ref|YP_870727.1| extracellular solute-binding protein [Shewanella sp. ANA-3]
gi|113885937|gb|ABI39989.1| extracellular solute-binding protein, family 1 [Shewanella sp.
MR-4]
gi|117613867|gb|ABK49321.1| extracellular solute-binding protein, family 1 [Shewanella sp.
ANA-3]
Length = 387
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R + + +PK GA+LW D+ AIPA
Sbjct: 254 DICVAFGFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPA 301
>gi|126173349|ref|YP_001049498.1| extracellular solute-binding protein [Shewanella baltica OS155]
gi|386340106|ref|YP_006036472.1| extracellular solute-binding protein [Shewanella baltica OS117]
gi|418023188|ref|ZP_12662173.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS625]
gi|125996554|gb|ABN60629.1| extracellular solute-binding protein, family 1 [Shewanella baltica
OS155]
gi|334862507|gb|AEH12978.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS117]
gi|353537071|gb|EHC06628.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS625]
Length = 366
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAAS 79
D+ VA G+S DV A R + + +PK GA+LW D+ AIPA S
Sbjct: 233 DICVAFGFSGDVFQAKARAEEAGNGNKIGYSIPKEGANLWFDMLAIPADS 282
>gi|359786979|ref|ZP_09290052.1| extracellular solute-binding protein [Halomonas sp. GFAJ-1]
gi|359295745|gb|EHK60007.1| extracellular solute-binding protein [Halomonas sp. GFAJ-1]
Length = 367
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S D+ A R + +PK GA+LW D+ AIPA
Sbjct: 234 DICVAAGYSGDIFQAADRAEEAGRDFTIGYSIPKEGAALWFDMMAIPA 281
>gi|418056504|ref|ZP_12694557.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans 1NES1]
gi|353209723|gb|EHB75126.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans 1NES1]
Length = 370
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 30 EAFGIRDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 80
A D+ +AVG+S D+L A K +A +PK GA +W D AIPA ++
Sbjct: 231 NALANGDICIAVGYSGDILQARSRAEEAKNGQEIAYSLPKQGAQMWFDEMAIPADAK 287
>gi|152999700|ref|YP_001365381.1| extracellular solute-binding protein [Shewanella baltica OS185]
gi|151364318|gb|ABS07318.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS185]
Length = 366
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAAS 79
D+ VA G+S DV A R + + +PK GA+LW D+ AIPA S
Sbjct: 233 DICVAFGFSGDVFQAKARAEEAGNGNKIGYSIPKEGANLWFDMLAIPADS 282
>gi|291279962|ref|YP_003496797.1| spermidine/putrescine ABC transporter substrate-binding protein
[Deferribacter desulfuricans SSM1]
gi|290754664|dbj|BAI81041.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Deferribacter desulfuricans SSM1]
Length = 353
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+V+VA+GW K N+ V PKSGA W D +AIPA S+
Sbjct: 226 EVYVAMGWDGGGWKLHKENPNIDFVAPKSGALGWIDTFAIPAKSK 270
>gi|77458902|ref|YP_348408.1| extracellular solute-binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77382905|gb|ABA74418.1| putative periplasmic putrescine-binding protein; permease protein
[Pseudomonas fluorescens Pf0-1]
Length = 361
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R ++ +PK GA++W D+ A+PA +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAKEAKNGIDIGYEIPKEGAAIWFDMVAMPADA 277
Query: 80 RLHKTNWRASQWSISID 96
K + + + D
Sbjct: 278 PDEKAGYAFMNYLLQPD 294
>gi|398872199|ref|ZP_10627501.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398203857|gb|EJM90671.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 361
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R ++ +PK GA++W D+ A+PA +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAREANNGIDIGYSIPKEGAAIWFDMVAMPADA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|114048491|ref|YP_739041.1| extracellular solute-binding protein [Shewanella sp. MR-7]
gi|113889933|gb|ABI43984.1| extracellular solute-binding protein, family 1 [Shewanella sp.
MR-7]
Length = 387
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R + + +PK GA+LW D+ AIPA
Sbjct: 254 DICVAFGFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPA 301
>gi|428217887|ref|YP_007102352.1| extracellular solute-binding protein [Pseudanabaena sp. PCC 7367]
gi|427989669|gb|AFY69924.1| extracellular solute-binding protein family 1 [Pseudanabaena sp.
PCC 7367]
Length = 392
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 26/147 (17%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTN 85
Y +E D +++ +S D L AV++ ++ ++P SG S+W D IP + +
Sbjct: 254 YAWAEPLMAGDYLISMAYSGDGLNAVRQNPDIKYILPASGTSIWTDAVVIPKTAPDPEA- 312
Query: 86 WRASQWSISIDPSMDRILLP-----FKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTD 140
A W +D I+ P +E GT+ A L K+ EEL D
Sbjct: 313 --AYAW-------IDFIMQPEIAARMSEESSYGTANKA---ALPKIKEEL--------KD 352
Query: 141 LIAGVPPAEILARCEFLEPLSEATFDV 167
+ A +P AEILA+ + L L + V
Sbjct: 353 IPAWLPSAEILAKSDRLVKLPDEVLQV 379
>gi|160879050|ref|YP_001558018.1| extracellular solute-binding protein [Clostridium phytofermentans
ISDg]
gi|160427716|gb|ABX41279.1| extracellular solute-binding protein family 1 [Clostridium
phytofermentans ISDg]
Length = 370
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 24/148 (16%)
Query: 24 KLYTLSEAF---GIRDVWVA------VGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 74
K Y L +A+ +RD + V +S + + + N+ VVPK G+++W D W
Sbjct: 223 KQYPLVQAYVVDQVRDKMIGEEAALGVIYSGEAIYTKRENENLEYVVPKEGSNVWIDGWV 282
Query: 75 IPAASRLHKTNWRASQWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGK 134
IP S+ +K N A W I+ D L F E I ++P+ L++ +E +K
Sbjct: 283 IPKNSK-NKEN--AEAW-INFMCRPDIALKNF--EYITYSTPNKAARELIE--DEDIKNS 334
Query: 135 PSLGTDLIAGVPPAEILARCEFLEPLSE 162
P A IL RC+ + L E
Sbjct: 335 Q-------VAFPDASILDRCKSFKYLGE 355
>gi|398905160|ref|ZP_10652641.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
gi|398174878|gb|EJM62659.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
Length = 365
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
D+ VA+G+S D+ A R + N+A +PK G +LW D+ AIP
Sbjct: 232 DICVAIGFSGDMFQAKARAAEAGKGMNIAYSIPKEGGALWFDMLAIP 278
>gi|399002045|ref|ZP_10704741.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
gi|398125789|gb|EJM15252.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
Length = 365
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
D+ VA+G+S D+ A R + N+A +PK G +LW D+ AIP
Sbjct: 232 DICVAIGFSGDMFQAKARAAEAGKGMNIAYSIPKEGGALWFDMLAIP 278
>gi|373948568|ref|ZP_09608529.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS183]
gi|386325590|ref|YP_006021707.1| extracellular solute-binding protein [Shewanella baltica BA175]
gi|333819735|gb|AEG12401.1| extracellular solute-binding protein family 1 [Shewanella baltica
BA175]
gi|373885168|gb|EHQ14060.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS183]
Length = 366
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAAS 79
D+ VA G+S DV A R + + +PK GA+LW D+ AIPA S
Sbjct: 233 DICVAFGFSGDVFQAKARAEEAGNGNKIGYSIPKEGANLWFDMLAIPADS 282
>gi|110803710|ref|YP_699248.1| spermidine/putrescine-binding periplasmic protein precursor
[Clostridium perfringens SM101]
gi|110684211|gb|ABG87581.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens SM101]
Length = 360
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISIDPS 98
+AV WS D + ++R ++A +PK G++ W D IP ++ HK N A ++ I+
Sbjct: 236 LAVAWSGDAVTMIERNPDLAYAIPKEGSNKWFDAIGIPKNAK-HKEN--AEKF---INFL 289
Query: 99 MDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
D E I ++P+ L LPE++ K P E L CE
Sbjct: 290 CDSENAEQNVEYIGYSTPNTAAYDL--LPEDIRDNK--------VAYPDKESLKNCE 336
>gi|404403552|ref|ZP_10995136.1| putrescine ABC transporter periplasmic protein [Pseudomonas
fuscovaginae UPB0736]
Length = 364
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
++ VA G+S D+ A KR ++A V+PK G +LW D+ AIP
Sbjct: 231 EICVAAGFSGDIFQAKKRAEEAKKGVDIAYVIPKEGGNLWFDMLAIP 277
>gi|398857090|ref|ZP_10612793.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
gi|398241404|gb|EJN27056.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
Length = 365
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
D+ VA+G+S D+ A R + N+A +PK G +LW D+ AIP
Sbjct: 232 DICVAIGFSGDMFQAKARAAEAGKGMNIAYSIPKEGGALWFDMLAIP 278
>gi|389690758|ref|ZP_10179651.1| spermidine/putrescine-binding periplasmic protein [Microvirga sp.
WSM3557]
gi|388589001|gb|EIM29290.1| spermidine/putrescine-binding periplasmic protein [Microvirga sp.
WSM3557]
Length = 361
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D+ VAVG+S D++ A R V V+P+ GA +W D +AIPA ++
Sbjct: 228 DICVAVGYSGDMIQAKNRAEEAKNGVEVGYVIPREGALMWFDSFAIPADAK 278
>gi|53714012|ref|YP_100004.1| spermidine/putrescine ABC transporter [Bacteroides fragilis YCH46]
gi|52216877|dbj|BAD49470.1| spermidine/putrescine ABC transporter [Bacteroides fragilis YCH46]
Length = 444
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D A++ V V VVP+ G+++W D W IP + N A+ + I
Sbjct: 251 WLNMTWSGDAKWAIEEADAVGVDLDYVVPREGSNIWYDGWVIPK----YAGNPEAASYFI 306
Query: 94 SIDPSMDRILLPFKQE--VIPGTSPSALE----TTLV---KLPEELLKGKPSLGTDLIAG 144
+ D L + V SP +E TTL L G SL D I
Sbjct: 307 NFMCRPDIALRNMEASGYVSAVASPEIMEAKTDTTLTYYSDLSYFFGPGADSLQIDKIQ- 365
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T DVL
Sbjct: 366 YPDRKVVERCAMIRDFGDKTKDVL 389
>gi|423691594|ref|ZP_17666114.1| periplasmic putrescine-binding protein, PotF family [Pseudomonas
fluorescens SS101]
gi|387999983|gb|EIK61312.1| periplasmic putrescine-binding protein, PotF family [Pseudomonas
fluorescens SS101]
Length = 359
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R N+ +PK GA++W D+ A+P +
Sbjct: 218 YTADLANG--DICVAVGFSGDILQAESRAKEAKNGVNIGYNIPKEGAAIWFDMVAMPVDA 275
Query: 80 RLHKTNW 86
K +
Sbjct: 276 PNEKAGY 282
>gi|336312486|ref|ZP_08567435.1| putrescine ABC transporter putrescine-binding protein PotF
[Shewanella sp. HN-41]
gi|335863992|gb|EGM69110.1| putrescine ABC transporter putrescine-binding protein PotF
[Shewanella sp. HN-41]
Length = 366
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DV A R + + +PK GA+LW D+ AIPA
Sbjct: 233 DICVAFGFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIPA 280
>gi|293396880|ref|ZP_06641154.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Serratia odorifera DSM 4582]
gi|291420351|gb|EFE93606.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Serratia odorifera DSM 4582]
Length = 369
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV+ A R NVA +PK GA + D++A+PA ++
Sbjct: 236 DICVAIGWAGDVMQASNRAKDAKNGVNVAYSIPKEGALAFFDVFAMPADAK 286
>gi|217974349|ref|YP_002359100.1| family 1 extracellular solute-binding protein [Shewanella baltica
OS223]
gi|217499484|gb|ACK47677.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS223]
Length = 366
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAAS 79
D+ VA G+S DV A R + + +PK GA+LW D+ AIPA S
Sbjct: 233 DICVAFGFSGDVFQAKARAEEAGNGNKIGYSIPKEGANLWFDMLAIPADS 282
>gi|399054172|ref|ZP_10742802.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. CF112]
gi|433544690|ref|ZP_20501067.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus agri BAB-2500]
gi|398048070|gb|EJL40562.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. CF112]
gi|432184038|gb|ELK41562.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus agri BAB-2500]
Length = 350
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 35 RDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
+ W+ WS D + +V V+PK GA++WAD AIP ++ HK
Sbjct: 223 EEAWIGTVWSGDAAIINGQNPDVEYVIPKEGATIWADTLAIPKGAK-HK 270
>gi|398925087|ref|ZP_10661658.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398172654|gb|EJM60514.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 361
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R ++ +PK GA++W D+ A+PA +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAREANNGIDIGYSIPKEGAAIWFDMVAMPADA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|398838345|ref|ZP_10595624.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
gi|398116345|gb|EJM06111.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
Length = 361
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D++ A R ++ +PK GA++W D+ A+PA +
Sbjct: 220 YTSDLANG--DICVAVGFSGDIIQAENRAKEARNGVDIGYSIPKEGAAIWFDMVAMPAGA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|118593580|ref|ZP_01550957.1| ABC transporter, polyamine transport protein, periplasmic protein
[Stappia aggregata IAM 12614]
gi|118433798|gb|EAV40458.1| ABC transporter, polyamine transport protein, periplasmic protein
[Stappia aggregata IAM 12614]
Length = 364
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 31 AFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
A D+ +AVGWS DVL A R + V +PK GA +W D AIPA
Sbjct: 226 ALANGDICLAVGWSGDVLQARDRAAEADNGVTVEYSIPKEGALMWFDQMAIPA 278
>gi|398939706|ref|ZP_10668799.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398164028|gb|EJM52177.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 365
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
D+ VA+G+S D+ A R + N+A +PK G +LW D+ AIP
Sbjct: 232 DICVAIGFSGDMFQAKARAAEAGKGMNIAYSIPKEGGALWFDMLAIP 278
>gi|66048088|ref|YP_237929.1| extracellular solute-binding protein [Pseudomonas syringae pv.
syringae B728a]
gi|63258795|gb|AAY39891.1| extracellular solute-binding protein, family 1 [Pseudomonas
syringae pv. syringae B728a]
Length = 364
Score = 40.0 bits (92), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|395799458|ref|ZP_10478739.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas sp. Ag1]
gi|421141037|ref|ZP_15601031.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens BBc6R8]
gi|395336562|gb|EJF68422.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas sp. Ag1]
gi|404507808|gb|EKA21784.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens BBc6R8]
Length = 364
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
++ VA G+S DV A R + N+A V+PK G +LW D+ AIP
Sbjct: 231 NICVAAGFSGDVFQAKARAAEAGKGVNIAYVIPKEGGNLWFDVLAIP 277
>gi|395495482|ref|ZP_10427061.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas sp. PAMC 25886]
Length = 364
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
++ VA G+S DV A R + N+A V+PK G +LW D+ AIP
Sbjct: 231 NICVAAGFSGDVFQAKARAAEAGKGVNIAYVIPKEGGNLWFDVLAIP 277
>gi|374329593|ref|YP_005079777.1| putrescine-binding periplasmic protein [Pseudovibrio sp. FO-BEG1]
gi|359342381|gb|AEV35755.1| Putrescine-binding periplasmic protein [Pseudovibrio sp. FO-BEG1]
Length = 363
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
D+ +A GWS DVL A R + V ++P GA +W D AIPA
Sbjct: 230 DICLAYGWSGDVLQAADRAAEADKGVEVTYILPSEGAQMWFDQIAIPA 277
>gi|378953501|ref|YP_005210989.1| protein SpuE/PotF2 [Pseudomonas fluorescens F113]
gi|359763515|gb|AEV65594.1| SpuE/PotF2 [Pseudomonas fluorescens F113]
Length = 365
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
++ VA G+S D+ A +R S ++A V+PK G +LW D+ AIP
Sbjct: 232 EICVAAGFSGDIFQARERASEAGKGVDIAYVIPKEGGNLWFDMLAIP 278
>gi|383814371|ref|ZP_09969792.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia sp. M24T3]
gi|383296781|gb|EIC85094.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia sp. M24T3]
Length = 368
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ DV+ A R N+A +PK GA + D++A+PA ++
Sbjct: 235 DICVAVGWAGDVIQASNRAKEAKNGVNIAYSIPKEGALAFFDVFAMPADAK 285
>gi|424069748|ref|ZP_17807192.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|424074540|ref|ZP_17811948.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|407994030|gb|EKG34642.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|407994062|gb|EKG34667.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. avellanae str. ISPaVe037]
Length = 364
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|294643752|ref|ZP_06721551.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
gi|292640936|gb|EFF59155.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
Length = 218
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ V V VPK G+++W D W IP +R N A+ + I
Sbjct: 24 WLNMTWSGDAIWAIEEADAVGVDLDYEVPKEGSNIWYDGWVIPKYAR----NPEAASYFI 79
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE-------TTLVKLPEELLKGKPSLGTDLIAG 144
+ P + + F V +P LE T L G S+ D I
Sbjct: 80 NFMCRPDIALRNMDFCGYVSSIATPEILEEKIDTTLTYFSDLSYFFGPGADSIQIDKIQ- 138
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 139 YPDRKVVERCAMIRDFGDKTKEVL 162
>gi|418058269|ref|ZP_12696246.1| extracellular solute-binding protein family 1 [Methylobacterium
extorquens DSM 13060]
gi|373568190|gb|EHP94142.1| extracellular solute-binding protein family 1 [Methylobacterium
extorquens DSM 13060]
Length = 367
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 21 GVVKLYTLSE---AFGIRDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWAD 71
G V+ + SE DV +AVG+S DV+ A KR +A +PK GA +W D
Sbjct: 216 GAVRKFHSSEYVNGLANGDVCLAVGYSGDVMQAKKRAEESKNGIEIAYFIPKEGALMWFD 275
Query: 72 LWAIP 76
+AIP
Sbjct: 276 AFAIP 280
>gi|422673021|ref|ZP_16732383.1| extracellular solute-binding protein [Pseudomonas syringae pv.
aceris str. M302273]
gi|330970757|gb|EGH70823.1| extracellular solute-binding protein [Pseudomonas syringae pv.
aceris str. M302273]
Length = 364
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|265764362|ref|ZP_06092930.1| spermidine/putrescine ABC transporter [Bacteroides sp. 2_1_16]
gi|263256970|gb|EEZ28316.1| spermidine/putrescine ABC transporter [Bacteroides sp. 2_1_16]
Length = 446
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D A++ V V VVP+ G+++W D W IP + N A+ + I
Sbjct: 253 WLNMTWSGDAKWAIEEADAVGVDLDYVVPREGSNIWYDGWVIPK----YAGNPEAASYFI 308
Query: 94 SIDPSMDRILLPFKQEVIPG-----TSPSALE----TTLV---KLPEELLKGKPSLGTDL 141
+ M R + + G SP +E TTL L G SL D
Sbjct: 309 NF---MCRPDIALRNMEASGYVSAVASPEIMEAKTDTTLTYYSDLSYFFGPGADSLQIDK 365
Query: 142 IAGVPPAEILARCEFLEPLSEATFDVLR 169
I P +++ RC + + T DVL
Sbjct: 366 IQ-YPDRKVVERCAMIRDFGDKTKDVLE 392
>gi|423256815|ref|ZP_17237738.1| hypothetical protein HMPREF1055_00015 [Bacteroides fragilis
CL07T00C01]
gi|423266220|ref|ZP_17245223.1| hypothetical protein HMPREF1056_02910 [Bacteroides fragilis
CL07T12C05]
gi|387778291|gb|EIK40386.1| hypothetical protein HMPREF1055_00015 [Bacteroides fragilis
CL07T00C01]
gi|392701575|gb|EIY94733.1| hypothetical protein HMPREF1056_02910 [Bacteroides fragilis
CL07T12C05]
Length = 444
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D A++ V V VVP+ G+++W D W IP + N A+ + I
Sbjct: 251 WLNMTWSGDAKWAIEEADAVGVDLDYVVPREGSNIWYDGWVIPK----YAGNPEAASYFI 306
Query: 94 SIDPSMDRILLPFKQEVIPG-----TSPSALE----TTLV---KLPEELLKGKPSLGTDL 141
+ M R + + G SP +E TTL L G SL D
Sbjct: 307 NF---MCRPDIALRNMEASGYVSAVASPEIMEAKTDTTLTYYSDLSYFFGPGADSLQIDK 363
Query: 142 IAGVPPAEILARCEFLEPLSEATFDVLR 169
I P +++ RC + + T DVL
Sbjct: 364 IQ-YPDRKVVERCAMIRDFGDKTKDVLE 390
>gi|383118923|ref|ZP_09939663.1| hypothetical protein BSHG_3967 [Bacteroides sp. 3_2_5]
gi|423250511|ref|ZP_17231527.1| hypothetical protein HMPREF1066_02537 [Bacteroides fragilis
CL03T00C08]
gi|423256012|ref|ZP_17236941.1| hypothetical protein HMPREF1067_03585 [Bacteroides fragilis
CL03T12C07]
gi|423271877|ref|ZP_17250847.1| hypothetical protein HMPREF1079_03929 [Bacteroides fragilis
CL05T00C42]
gi|423276339|ref|ZP_17255280.1| hypothetical protein HMPREF1080_03933 [Bacteroides fragilis
CL05T12C13]
gi|382973261|gb|EES84629.2| hypothetical protein BSHG_3967 [Bacteroides sp. 3_2_5]
gi|392650094|gb|EIY43766.1| hypothetical protein HMPREF1067_03585 [Bacteroides fragilis
CL03T12C07]
gi|392652820|gb|EIY46478.1| hypothetical protein HMPREF1066_02537 [Bacteroides fragilis
CL03T00C08]
gi|392696733|gb|EIY89925.1| hypothetical protein HMPREF1079_03929 [Bacteroides fragilis
CL05T00C42]
gi|392697380|gb|EIY90565.1| hypothetical protein HMPREF1080_03933 [Bacteroides fragilis
CL05T12C13]
Length = 444
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D A++ V V VVP+ G+++W D W IP + N A+ + I
Sbjct: 251 WLNMTWSGDAKWAIEEADAVGVDLDYVVPREGSNIWYDGWVIPK----YAGNPEAASYFI 306
Query: 94 SIDPSMDRILLPFKQEVIPG-----TSPSALE----TTLV---KLPEELLKGKPSLGTDL 141
+ M R + + G SP +E TTL L G SL D
Sbjct: 307 NF---MCRPDIALRNMEASGYVSAVASPEIMEAKTDTTLTYYSDLSYFFGPGADSLQIDK 363
Query: 142 IAGVPPAEILARCEFLEPLSEATFDVLR 169
I P +++ RC + + T DVL
Sbjct: 364 IQ-YPDRKVVERCAMIRDFGDKTKDVLE 390
>gi|289626089|ref|ZP_06459043.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289651117|ref|ZP_06482460.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aesculi str. 2250]
gi|422584131|ref|ZP_16659245.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330868952|gb|EGH03661.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 364
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|443641720|ref|ZP_21125570.1| Sperimdine/putrescine ABC-type transport system, substrate-binding
protein [Pseudomonas syringae pv. syringae B64]
gi|443281737|gb|ELS40742.1| Sperimdine/putrescine ABC-type transport system, substrate-binding
protein [Pseudomonas syringae pv. syringae B64]
Length = 364
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|410089930|ref|ZP_11286537.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas viridiflava UASWS0038]
gi|409762797|gb|EKN47796.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas viridiflava UASWS0038]
Length = 364
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|387893794|ref|YP_006324091.1| periplasmic putrescine-binding protein, PotF family [Pseudomonas
fluorescens A506]
gi|387159587|gb|AFJ54786.1| periplasmic putrescine-binding protein, PotF family [Pseudomonas
fluorescens A506]
Length = 359
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
YT A G D+ VAVG+S D+L A R N+ +PK GA++W D+ A+P
Sbjct: 218 YTADLANG--DICVAVGFSGDILQAESRAKEAKNGVNIGYNIPKEGAAIWFDMVAMP 272
>gi|418021465|ref|ZP_12660549.1| Spermidine/putrescine-binding periplasmic protein [Candidatus
Regiella insecticola R5.15]
gi|347603175|gb|EGY28056.1| Spermidine/putrescine-binding periplasmic protein [Candidatus
Regiella insecticola R5.15]
Length = 379
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ D++ A R N+A +PK GA + D++A+PA ++
Sbjct: 246 DICVAVGWNGDIVQAANRAKEAKNGVNIAYSIPKEGALVTFDVFAMPADAK 296
>gi|422608005|ref|ZP_16679996.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. mori str. 301020]
gi|330891638|gb|EGH24299.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. mori str. 301020]
Length = 364
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|163853417|ref|YP_001641460.1| extracellular solute-binding protein [Methylobacterium extorquens
PA1]
gi|163665022|gb|ABY32389.1| extracellular solute-binding protein family 1 [Methylobacterium
extorquens PA1]
Length = 367
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 21 GVVKLYTLSE---AFGIRDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWAD 71
G V+ + SE DV +AVG+S DV+ A KR +A +PK GA +W D
Sbjct: 216 GAVRKFHSSEYVNGLANGDVCLAVGYSGDVMQAKKRAEESKNGIEIAYFIPKEGALMWFD 275
Query: 72 LWAIP 76
+AIP
Sbjct: 276 AFAIP 280
>gi|422300669|ref|ZP_16388180.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas avellanae BPIC 631]
gi|407987082|gb|EKG29964.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas avellanae BPIC 631]
Length = 364
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|339489912|ref|YP_004704440.1| extracellular solute-binding protein [Pseudomonas putida S16]
gi|338840755|gb|AEJ15560.1| extracellular solute-binding protein [Pseudomonas putida S16]
Length = 381
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 248 DICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 298
>gi|218459052|ref|ZP_03499143.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Rhizobium etli Kim 5]
Length = 199
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
AF D+ +A G+S D+L A R + V +P GA +W D+ AIPA ++
Sbjct: 60 NAFANGDICIAFGYSGDMLQARDRAAEAKNGVEVNYSIPAQGAQMWFDMMAIPADAK 116
>gi|422620565|ref|ZP_16689242.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. japonica str. M301072]
gi|330900922|gb|EGH32341.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. japonica str. M301072]
Length = 364
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|289672275|ref|ZP_06493165.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. syringae FF5]
gi|422633838|ref|ZP_16698957.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. pisi str. 1704B]
gi|422668304|ref|ZP_16728162.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440724022|ref|ZP_20904372.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP34876]
gi|440728705|ref|ZP_20908910.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP34881]
gi|330944393|gb|EGH46414.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. pisi str. 1704B]
gi|330980671|gb|EGH78774.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440358665|gb|ELP96011.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP34876]
gi|440360838|gb|ELP98093.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP34881]
Length = 364
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|254563346|ref|YP_003070441.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Methylobacterium extorquens DM4]
gi|254270624|emb|CAX26627.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Methylobacterium extorquens DM4]
Length = 366
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 21 GVVKLYTLSE---AFGIRDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWAD 71
G V+ + SE DV +AVG+S DV+ A KR +A +PK GA +W D
Sbjct: 215 GAVRKFHSSEYVNGLANGDVCLAVGYSGDVMQAKKRAEESKNGIEIAYFIPKEGALMWFD 274
Query: 72 LWAIP 76
+AIP
Sbjct: 275 AFAIP 279
>gi|416022126|ref|ZP_11567366.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|422403034|ref|ZP_16480093.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|320331741|gb|EFW87679.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330872512|gb|EGH06661.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. race 4]
Length = 364
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|416013841|ref|ZP_11561773.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. B076]
gi|320326259|gb|EFW82312.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. glycinea str. B076]
Length = 364
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|420241083|ref|ZP_14745247.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF080]
gi|398072841|gb|EJL64038.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF080]
Length = 365
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D + +GWS DVL A R N+ ++PK G +W D AIPA ++
Sbjct: 232 DSCITIGWSGDVLQAKTRAEEAKNGVNIEFIIPKEGTYMWFDNLAIPADAK 282
>gi|222084921|ref|YP_002543450.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter
K84]
gi|221722369|gb|ACM25525.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter
K84]
Length = 374
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
A D+ + G+S DVL A R + N++ +PK GA +W D+ AIPA
Sbjct: 235 NALANGDICLTFGYSGDVLQARNRAAEAKNGINISYSIPKKGAQMWFDVMAIPA 288
>gi|71733632|ref|YP_276985.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae pv. phaseolicola 1448A]
gi|71554185|gb|AAZ33396.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. phaseolicola 1448A]
Length = 364
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|291529331|emb|CBK94917.1| Spermidine/putrescine-binding periplasmic protein [Eubacterium
rectale M104/1]
Length = 624
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 22/127 (17%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISIDPS 98
+AV +S + A+ N+ +VPK G++LW D W IP + N +Q ++
Sbjct: 501 IAVCYSGEAAAAMAENDNLDYIVPKEGSNLWIDSWFIPKTCK----NKEGAQEFLN---- 552
Query: 99 MDRILLPFKQEVIPGTSPSALETTLVKLP---EELLKGKPSLGTDLIAGVPPAEILARCE 155
I G P+ L V + +++ + + + A PP+++L CE
Sbjct: 553 -----------YICGDEPAQLNFEYVYYASPIQSVIENQDAETKENEAINPPSDMLKNCE 601
Query: 156 FLEPLSE 162
L++
Sbjct: 602 VYRALND 608
>gi|257483767|ref|ZP_05637808.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|422596916|ref|ZP_16671194.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|422682743|ref|ZP_16741007.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|330987211|gb|EGH85314.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|331012081|gb|EGH92137.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 364
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|423283894|ref|ZP_17262778.1| hypothetical protein HMPREF1204_02316 [Bacteroides fragilis HMW
615]
gi|404580440|gb|EKA85149.1| hypothetical protein HMPREF1204_02316 [Bacteroides fragilis HMW
615]
Length = 444
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D A++ V V VVP+ G+++W D W IP + N A+ + I
Sbjct: 251 WLNMTWSGDAKWAIEEADAVGVDLDYVVPREGSNIWYDGWVIPK----YAGNPEAASYFI 306
Query: 94 SIDPSMDRILLPFKQEVIPG-----TSPSALE----TTLV---KLPEELLKGKPSLGTDL 141
+ M R + + G SP +E TTL L G SL D
Sbjct: 307 NF---MCRPDIALRNMEASGYVSAVASPEIMEAKTDTTLTYYSDLSYFFGPGADSLQIDK 363
Query: 142 IAGVPPAEILARCEFLEPLSEATFDVLR 169
I P +++ RC + + T DVL
Sbjct: 364 IQ-YPDRKVVERCAMIRDFGDKTKDVLE 390
>gi|60682208|ref|YP_212352.1| ABC transporter lipoprotein [Bacteroides fragilis NCTC 9343]
gi|375359005|ref|YP_005111777.1| putative ABC transport system, lipoprotein [Bacteroides fragilis
638R]
gi|60493642|emb|CAH08431.1| putative ABC transport system, lipoprotein [Bacteroides fragilis
NCTC 9343]
gi|301163686|emb|CBW23240.1| putative ABC transport system, lipoprotein [Bacteroides fragilis
638R]
Length = 446
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D A++ V V VVP+ G+++W D W IP + N A+ + I
Sbjct: 253 WLNMTWSGDAKWAIEEADAVGVDLDYVVPREGSNIWYDGWVIPK----YAGNPEAASYFI 308
Query: 94 SIDPSMDRILLPFKQEVIPG-----TSPSALE----TTLV---KLPEELLKGKPSLGTDL 141
+ M R + + G SP +E TTL L G SL D
Sbjct: 309 NF---MCRPDIALRNMEASGYVSAVASPEIMEAKTDTTLTYYSDLSYFFGPGADSLQIDK 365
Query: 142 IAGVPPAEILARCEFLEPLSEATFDVLR 169
I P +++ RC + + T DVL
Sbjct: 366 IQ-YPDRKVVERCAMIRDFGDKTKDVLE 392
>gi|325271715|ref|ZP_08138201.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas sp. TJI-51]
gi|324103150|gb|EGC00511.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas sp. TJI-51]
Length = 364
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|431805015|ref|YP_007231918.1| extracellular solute-binding protein [Pseudomonas putida HB3267]
gi|430795780|gb|AGA75975.1| extracellular solute-binding protein [Pseudomonas putida HB3267]
Length = 364
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 231 DICVAAGFSGDVFQAKTRAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|421497340|ref|ZP_15944512.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas media
WS]
gi|407183686|gb|EKE57571.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas media
WS]
Length = 361
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S D+L A R +A +PK G +LW D+ AIP+
Sbjct: 228 DICVAAGFSGDILQAAARADEAGKGIKIAYSIPKEGGNLWFDMMAIPS 275
>gi|398381287|ref|ZP_10539397.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
AP16]
gi|397719592|gb|EJK80159.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
AP16]
Length = 365
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
A D+ + G+S DVL A R + N++ +PK GA +W D+ AIPA
Sbjct: 226 NALANGDICLTFGYSGDVLQARNRAAEAKNGINISYSIPKKGAQMWFDVMAIPA 279
>gi|395648865|ref|ZP_10436715.1| extracellular solute-binding protein [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 380
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 16/121 (13%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D W+A+ W+ D + M + + + G LW+D +AIP +S HK A + +
Sbjct: 255 DAWLAMSWTGDASQLHRDMPQMHFTLGQEGGELWSDFFAIPKSSE-HKDAAYAF-INYLL 312
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
DP +++ EV+ PS + LP +L+ D I P AE L+ E
Sbjct: 313 DPQHNKL------EVLSHGYPSGDKRVDALLPPAMLE-------DPIM-YPAAEALSPLE 358
Query: 156 F 156
F
Sbjct: 359 F 359
>gi|422654041|ref|ZP_16716794.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. actinidiae str. M302091]
gi|330967077|gb|EGH67337.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. actinidiae str. M302091]
Length = 364
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|422586173|ref|ZP_16661192.1| putrescine ABC transporter periplasmic putrescine-binding protein,
partial [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330880486|gb|EGH14635.1| putrescine ABC transporter periplasmic putrescine-binding protein,
partial [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 359
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSK 281
>gi|398848447|ref|ZP_10605262.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
gi|398248364|gb|EJN33781.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
Length = 364
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|325914763|ref|ZP_08177101.1| spermidine/putrescine-binding periplasmic protein [Xanthomonas
vesicatoria ATCC 35937]
gi|325539040|gb|EGD10698.1| spermidine/putrescine-binding periplasmic protein [Xanthomonas
vesicatoria ATCC 35937]
Length = 371
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Query: 6 GAIRSIQESSTKFWYGVVKLYTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAV 59
G I+SI+ F Y S A G + +AVGWS D++ A R VA
Sbjct: 213 GLIKSIRPYVQNFH---SSQYVTSLANG--NTCLAVGWSGDIIQARDRAKEAGNNVKVAY 267
Query: 60 VVPKSGASLWADLWAIPAASRLHKTNWRA 88
+PK GA W D+ AIP ++ H N A
Sbjct: 268 AIPKEGAPQWFDMLAIPKDAK-HPENAYA 295
>gi|338997731|ref|ZP_08636423.1| extracellular solute-binding protein [Halomonas sp. TD01]
gi|338765360|gb|EGP20300.1| extracellular solute-binding protein [Halomonas sp. TD01]
Length = 367
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S D+ A R + +PK GA+LW D+ A+PA
Sbjct: 234 DICVAAGYSGDIFQAADRAEEAGRDFTIGYSIPKEGAALWFDMMAVPA 281
>gi|26991856|ref|NP_747281.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas putida KT2440]
gi|24986974|gb|AAN70745.1|AE016718_4 putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas putida KT2440]
Length = 364
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|386014451|ref|YP_005932728.1| PotF [Pseudomonas putida BIRD-1]
gi|313501157|gb|ADR62523.1| PotF [Pseudomonas putida BIRD-1]
Length = 364
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|397697187|ref|YP_006535070.1| extracellular solute-binding protein [Pseudomonas putida DOT-T1E]
gi|421523437|ref|ZP_15970066.1| extracellular solute-binding protein [Pseudomonas putida LS46]
gi|397333917|gb|AFO50276.1| extracellular solute-binding protein [Pseudomonas putida DOT-T1E]
gi|402752423|gb|EJX12928.1| extracellular solute-binding protein [Pseudomonas putida LS46]
Length = 364
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|238924524|ref|YP_002938040.1| ornithine carbamoyltransferase [Eubacterium rectale ATCC 33656]
gi|238876199|gb|ACR75906.1| ornithine carbamoyltransferase [Eubacterium rectale ATCC 33656]
Length = 624
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 16/124 (12%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISIDPS 98
+AV +S + A+ N+ +VPK G++LW D W IP + + + S +P+
Sbjct: 501 IAVCYSGEAAAAMAENDNLDYIVPKEGSNLWIDSWFIPKTCKNKEGAQEFLNYICSDEPA 560
Query: 99 MDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFLE 158
L F E + SP + +++ + + + A PP+++L CE
Sbjct: 561 Q----LNF--EYVYYASP----------IQSVIENQDAETKENEAINPPSDMLKNCEVYR 604
Query: 159 PLSE 162
L++
Sbjct: 605 ALND 608
>gi|406939602|gb|EKD72586.1| hypothetical protein ACD_45C00633G0013 [uncultured bacterium]
Length = 351
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 23 VKLYTLSEAFGI---RDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
+KL+ A I D + + W+ D+ A K SN+ V PK G +W D +AIP +
Sbjct: 208 IKLFKSDGAITILIDEDANIGMAWNGDLYKAQKENSNLTFVFPKDGFVMWVDNFAIPRNA 267
Query: 80 RLHKTN 85
H+ N
Sbjct: 268 P-HREN 272
>gi|148550287|ref|YP_001270389.1| extracellular solute-binding protein [Pseudomonas putida F1]
gi|148514345|gb|ABQ81205.1| extracellular solute-binding protein, family 1 [Pseudomonas putida
F1]
Length = 364
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|421529430|ref|ZP_15975965.1| extracellular solute-binding protein [Pseudomonas putida S11]
gi|402213158|gb|EJT84520.1| extracellular solute-binding protein [Pseudomonas putida S11]
Length = 288
Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 155 DICVAAGFSGDVFQAKTRAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 205
>gi|347736466|ref|ZP_08869099.1| putrescine-binding periplasmic protein PotF [Azospirillum
amazonense Y2]
gi|346920037|gb|EGY01308.1| putrescine-binding periplasmic protein PotF [Azospirillum
amazonense Y2]
Length = 360
Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN---VAVVVPKSGASLWADLWAIPAAS 79
D VA+G+S DVL A R + +PK GA LW D AIPA +
Sbjct: 230 DACVAIGYSGDVLQAQARSGGKVKIDYAIPKEGAQLWFDTLAIPAGA 276
>gi|293368976|ref|ZP_06615577.1| bacterial extracellular solute-binding protein [Bacteroides ovatus
SD CMC 3f]
gi|299149311|ref|ZP_07042371.1| spermidine/putrescine ABC transporter [Bacteroides sp. 3_1_23]
gi|336414007|ref|ZP_08594355.1| hypothetical protein HMPREF1017_01463 [Bacteroides ovatus
3_8_47FAA]
gi|423286120|ref|ZP_17264971.1| hypothetical protein HMPREF1069_00014 [Bacteroides ovatus
CL02T12C04]
gi|423295944|ref|ZP_17274029.1| hypothetical protein HMPREF1070_02694 [Bacteroides ovatus
CL03T12C18]
gi|292635996|gb|EFF54487.1| bacterial extracellular solute-binding protein [Bacteroides ovatus
SD CMC 3f]
gi|298512745|gb|EFI36634.1| spermidine/putrescine ABC transporter [Bacteroides sp. 3_1_23]
gi|335934537|gb|EGM96531.1| hypothetical protein HMPREF1017_01463 [Bacteroides ovatus
3_8_47FAA]
gi|392670554|gb|EIY64032.1| hypothetical protein HMPREF1070_02694 [Bacteroides ovatus
CL03T12C18]
gi|392674807|gb|EIY68249.1| hypothetical protein HMPREF1069_00014 [Bacteroides ovatus
CL02T12C04]
Length = 450
Score = 39.7 bits (91), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ + V V VP+ G+++W D W IP +R N A+ + I
Sbjct: 256 WLNMTWSGDAIWAIEEANAVGVDLDYEVPEEGSNIWYDGWVIPKYAR----NPEAASYFI 311
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTL---VKLPEELLKGKPSLGTDLIAG 144
+ P + + F V +P LE TTL L G S+ D I
Sbjct: 312 NFMCRPDIALRNMDFCGYVSSIATPEILEEKIDTTLHYYSDLSYFFGPGADSVQIDKIQ- 370
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 371 YPDRKVVERCAMIRDFGDKTKEVL 394
>gi|395446064|ref|YP_006386317.1| extracellular solute-binding protein [Pseudomonas putida ND6]
gi|388560061|gb|AFK69202.1| extracellular solute-binding protein [Pseudomonas putida ND6]
Length = 364
Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|319782139|ref|YP_004141615.1| family 1 extracellular solute-binding protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317168027|gb|ADV11565.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 365
Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPA 77
D+ +AVGWS DV A K+ + VPK GA +W D AIPA
Sbjct: 232 DICLAVGWSGDVFQARNRAVEAKQGVEIGYSVPKEGAQMWFDQMAIPA 279
>gi|291525209|emb|CBK90796.1| Spermidine/putrescine-binding periplasmic protein [Eubacterium
rectale DSM 17629]
Length = 624
Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 16/124 (12%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISIDPS 98
+AV +S + A+ N+ +VPK G++LW D W IP + + + S +P+
Sbjct: 501 IAVCYSGEAAAAMAENDNLDYIVPKEGSNLWIDSWFIPKTCKNKEGAQEFLNYICSDEPA 560
Query: 99 MDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFLE 158
L F E + SP + +++ + + + A PP+++L CE
Sbjct: 561 Q----LNF--EYVYYASP----------IQSVIENQDAETKENEAINPPSDMLKNCEVYR 604
Query: 159 PLSE 162
L++
Sbjct: 605 ALND 608
>gi|167036227|ref|YP_001671458.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
gi|166862715|gb|ABZ01123.1| extracellular solute-binding protein family 1 [Pseudomonas putida
GB-1]
Length = 364
Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A K+ N+A +PK G +LW D+ AIP ++
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAK 281
>gi|423203722|ref|ZP_17190290.1| hypothetical protein HMPREF1167_03873 [Aeromonas veronii AER39]
gi|404612500|gb|EKB09561.1| hypothetical protein HMPREF1167_03873 [Aeromonas veronii AER39]
Length = 361
Score = 39.7 bits (91), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S D+L A R +A +PK G +LW D+ AIP+
Sbjct: 228 DICVAAGFSGDILQAAARADEAGKGVKIAYSIPKEGGNLWFDMMAIPS 275
>gi|433773782|ref|YP_007304249.1| spermidine/putrescine-binding periplasmic protein [Mesorhizobium
australicum WSM2073]
gi|433665797|gb|AGB44873.1| spermidine/putrescine-binding periplasmic protein [Mesorhizobium
australicum WSM2073]
Length = 365
Score = 39.7 bits (91), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 30 EAFGIRDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPA 77
A D+ +AVGWS DV A K+ + VPK GA +W D AIPA
Sbjct: 226 NALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYSVPKEGAQMWFDQMAIPA 279
>gi|237802234|ref|ZP_04590695.1| putrescine ABC transporter periplasmic putrescine-binding protein,
partial [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331025091|gb|EGI05147.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. oryzae str. 1_6]
Length = 342
Score = 39.7 bits (91), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIPA S+
Sbjct: 234 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKEGGNLWFDMLAIPADSQ 284
>gi|15887954|ref|NP_353635.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium fabrum str. C58]
gi|15155556|gb|AAK86420.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium fabrum str. C58]
Length = 365
Score = 39.7 bits (91), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D +++GWS D+L A R V V+PK G +W D +AIPA ++
Sbjct: 232 DTCISIGWSGDILQAKTRAEEAKNGVEVNYVIPKEGTYIWMDSFAIPADAK 282
>gi|88861147|ref|ZP_01135781.1| periplasmic putrescine-binding protein [Pseudoalteromonas tunicata
D2]
gi|88816869|gb|EAR26690.1| periplasmic putrescine-binding protein [Pseudoalteromonas tunicata
D2]
Length = 365
Score = 39.7 bits (91), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D VA G+S D+L A R + VA VVP GA +W D+ AIPA S+
Sbjct: 232 DSCVAHGYSGDLLQARDRAAEANNGVEVAYVVPSEGAVVWTDVMAIPADSK 282
>gi|423204840|ref|ZP_17191396.1| hypothetical protein HMPREF1168_01031 [Aeromonas veronii AMC34]
gi|404625716|gb|EKB22531.1| hypothetical protein HMPREF1168_01031 [Aeromonas veronii AMC34]
Length = 361
Score = 39.7 bits (91), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
D+ VA G+S D+L A R +A +PK G +LW D+ AIP+
Sbjct: 228 DICVAAGFSGDILQAAARADEAGKGVKIAYSIPKEGGNLWFDMMAIPS 275
>gi|335035434|ref|ZP_08528775.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium sp. ATCC 31749]
gi|333793201|gb|EGL64557.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium sp. ATCC 31749]
Length = 365
Score = 39.7 bits (91), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D +++GWS D+L A R V V+PK G +W D +AIPA ++
Sbjct: 232 DTCISIGWSGDILQAKTRAEEAKNGVEVNYVIPKEGTYIWMDSFAIPADAK 282
>gi|395649101|ref|ZP_10436951.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 364
Score = 39.7 bits (91), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
++ VA G+S DV A R S N+A +PK G +LW D+ AIP
Sbjct: 231 NICVAAGFSGDVFQAKARASEAGKGVNIAYAIPKEGGNLWFDVLAIP 277
>gi|383121334|ref|ZP_09942047.1| hypothetical protein BSIG_1172 [Bacteroides sp. 1_1_6]
gi|382984726|gb|EES70899.2| hypothetical protein BSIG_1172 [Bacteroides sp. 1_1_6]
Length = 458
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 16/143 (11%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ + V V VVPK G+++W D W IP ++ N A+ + I
Sbjct: 262 WLNMTWSGDAIWAIEEANAVGVDLDYVVPKEGSNIWYDGWVIPKYAK----NPVAASYFI 317
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTLVKLPEELLKGKPSLGTDLIAGV-- 145
+ P + + F V +P LE TTL + P + I +
Sbjct: 318 NFMCRPDIALRNMDFCGYVSSIATPEILEEKVDTTLDYYADLSYFFDPDADSIQIDKIQY 377
Query: 146 PPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 378 PDRKVVERCAMIRDFGDKTKEVL 400
>gi|330827832|ref|YP_004390784.1| spermidine/putrescine ABC transporter substrate-binding protein
[Aeromonas veronii B565]
gi|423211496|ref|ZP_17198029.1| hypothetical protein HMPREF1169_03547 [Aeromonas veronii AER397]
gi|328802968|gb|AEB48167.1| Spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Aeromonas veronii
B565]
gi|404613576|gb|EKB10597.1| hypothetical protein HMPREF1169_03547 [Aeromonas veronii AER397]
Length = 361
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S D+L A R +A +PK G +LW D+ AIP+
Sbjct: 228 DICVAAGFSGDILQAAARADEAGKGVKIAYSIPKEGGNLWFDMMAIPS 275
>gi|167033710|ref|YP_001668941.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
gi|166860198|gb|ABY98605.1| extracellular solute-binding protein family 1 [Pseudomonas putida
GB-1]
Length = 362
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
DV VA G+S DV A R VA +PK G++LW DL AIP
Sbjct: 229 DVCVAFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|86607434|ref|YP_476197.1| polyamine transporter, polyamine-binding protein [Synechococcus sp.
JA-3-3Ab]
gi|86555976|gb|ABD00934.1| polyamine transporter, polyamine-binding protein [Synechococcus sp.
JA-3-3Ab]
Length = 354
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 77
VAV +S D L A + N+ VP+ GA +W D+ AIPA
Sbjct: 231 VAVVYSGDALQAAEENPNIGYFVPREGAHIWLDVMAIPA 269
>gi|72160685|ref|YP_288342.1| polyamine-binding lipoprotein [Thermobifida fusca YX]
gi|71914417|gb|AAZ54319.1| putative polyamine-binding lipoprotein [Thermobifida fusca YX]
Length = 412
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 36 DVWVAVGWSSDVLPA-VKRMSNVAVVVPKSGASLWADLWAIPAASR 80
D+W+ + WS D+ + +N+ V+P+ GA+LW D IP ++
Sbjct: 269 DIWITMAWSGDIYQVNAEEGTNLKFVIPEEGATLWTDNLTIPITAQ 314
>gi|406674913|ref|ZP_11082105.1| hypothetical protein HMPREF1170_00313 [Aeromonas veronii AMC35]
gi|404628421|gb|EKB25203.1| hypothetical protein HMPREF1170_00313 [Aeromonas veronii AMC35]
Length = 361
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S D+L A R +A +PK G +LW D+ AIP+
Sbjct: 228 DICVAAGFSGDILQAAARADEAGKGVKIAYSIPKEGGNLWFDMMAIPS 275
>gi|337267065|ref|YP_004611120.1| family 1 extracellular solute-binding protein [Mesorhizobium
opportunistum WSM2075]
gi|336027375|gb|AEH87026.1| extracellular solute-binding protein family 1 [Mesorhizobium
opportunistum WSM2075]
Length = 365
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 30 EAFGIRDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPA 77
A D+ +AVGWS DV A K+ + VPK GA +W D AIPA
Sbjct: 226 NALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYSVPKEGAQMWFDQMAIPA 279
>gi|238789658|ref|ZP_04633441.1| Putrescine-binding periplasmic protein [Yersinia frederiksenii ATCC
33641]
gi|238722211|gb|EEQ13868.1| Putrescine-binding periplasmic protein [Yersinia frederiksenii ATCC
33641]
Length = 369
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ DV+ A R NVA +PK GA + D++A+P+ ++
Sbjct: 236 DICVAVGWAGDVMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAK 286
>gi|86607999|ref|YP_476761.1| polyamine transporter, periplasmic polyamine-binding protein
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556541|gb|ABD01498.1| polyamine transporter, periplasmic polyamine-binding protein
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 365
Score = 39.7 bits (91), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
VA+ +S D L A + N+ VP+ GA +W D+ AIPA +
Sbjct: 242 VAIVYSGDALQAAEENPNIGYFVPREGAHIWLDVMAIPAQA 282
>gi|408482246|ref|ZP_11188465.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. R81]
Length = 362
Score = 39.7 bits (91), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
++ VA G+S DV A R +A +PK G++LW DL AIPA
Sbjct: 229 NICVAFGYSGDVFQAANRAKEAKNGVKIAYSIPKEGSNLWFDLLAIPA 276
>gi|409399066|ref|ZP_11249438.1| ABC transporter substrate-binding protein [Acidocella sp. MX-AZ02]
gi|409131710|gb|EKN01399.1| ABC transporter substrate-binding protein [Acidocella sp. MX-AZ02]
Length = 408
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 7 AIRSIQESSTKFWYGVVKLY---TLSEAFGIRDVWVAVGWSSDVLPA-VKRMSNVAVVVP 62
A +++E K G+V+ Y + A D+W+ + WS D+ A K ++ VVP
Sbjct: 246 AAATLKEQKAK---GLVRQYYDQSYINALENGDIWITMAWSGDIYQANSKGYKDLKFVVP 302
Query: 63 KSGASLWADLWAIPAASR 80
K GA +W D IP ++
Sbjct: 303 KQGAVIWHDNMCIPVGAK 320
>gi|398844417|ref|ZP_10601481.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
gi|398254503|gb|EJN39596.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
Length = 312
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIP 76
DV VA G+S DV A R VA +PK G++LW DL AIP
Sbjct: 179 DVCVAFGYSGDVFQAANRAIEAKNGVKVAYSIPKEGSNLWFDLLAIP 225
>gi|325291998|ref|YP_004277862.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
sp. H13-3]
gi|418408087|ref|ZP_12981404.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens 5A]
gi|325059851|gb|ADY63542.1| putrescine ABC transporter, substrate binding protein
[Agrobacterium sp. H13-3]
gi|358006073|gb|EHJ98398.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens 5A]
Length = 365
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D + +GWS D+L A KR V V+PK G +W D AIPA ++
Sbjct: 232 DSCITIGWSGDILQAKKRAEEAKNGVEVNYVIPKEGTYMWFDNLAIPADAK 282
>gi|320354601|ref|YP_004195940.1| family 1 extracellular solute-binding protein [Desulfobulbus
propionicus DSM 2032]
gi|320123103|gb|ADW18649.1| extracellular solute-binding protein family 1 [Desulfobulbus
propionicus DSM 2032]
Length = 367
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 22/140 (15%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISIDPS 98
V +GW D A VA ++P+ G +LW+D + IPA+S N ++ I+
Sbjct: 236 VLLGWPMDYQVAHAANPAVAYILPEEGTALWSDNYVIPASS----PNVYTAEVFINF--- 288
Query: 99 MDRILLP--FKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEF 156
+L P Q V + P+A E L +L+ KP + D + PPAE L R F
Sbjct: 289 ---LLRPEISAQIVNERSYPTANEAAL-----DLI--KPEVRNDPVI-FPPAEALRRAHF 337
Query: 157 LEPLSE--ATFDVLRWLKFL 174
PLS T W +FL
Sbjct: 338 YRPLSREGETLYQRAWDRFL 357
>gi|260429146|ref|ZP_05783123.1| putrescine-binding periplasmic protein [Citreicella sp. SE45]
gi|260419769|gb|EEX13022.1| putrescine-binding periplasmic protein [Citreicella sp. SE45]
Length = 362
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 31 AFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
A D+ VAVGWS D+L A R + ++ P GA +W D+ AIP
Sbjct: 224 ALANGDICVAVGWSGDILQARDRAAEADNGVEISYYAPDEGAQMWFDMMAIP 275
>gi|398968560|ref|ZP_10682383.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398143644|gb|EJM32515.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 363
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
YT A G D+ VA+G+S DV+ A R ++ ++PK G +LW D+ AIP
Sbjct: 222 YTADLANG--DICVAIGYSGDVMQAQTRAREAGKNIDIRYLIPKEGVNLWFDMLAIP 276
>gi|397693845|ref|YP_006531725.1| extracellular solute-binding protein [Pseudomonas putida DOT-T1E]
gi|397330575|gb|AFO46934.1| extracellular solute-binding protein [Pseudomonas putida DOT-T1E]
Length = 362
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
DV VA G+S DV A R VA +PK G++LW DL AIP
Sbjct: 229 DVCVAFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|334706307|ref|ZP_08522173.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas caviae
Ae398]
Length = 359
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
++ VA G+S D+L A R +A +PK G +LW D+ AIPA
Sbjct: 226 NICVAAGFSGDILQAASRAEEAGKGIKIAYSIPKEGGNLWFDMMAIPA 273
>gi|148547784|ref|YP_001267886.1| extracellular solute-binding protein [Pseudomonas putida F1]
gi|395449383|ref|YP_006389636.1| extracellular solute-binding protein [Pseudomonas putida ND6]
gi|421521263|ref|ZP_15967922.1| extracellular solute-binding protein [Pseudomonas putida LS46]
gi|148511842|gb|ABQ78702.1| extracellular solute-binding protein, family 1 [Pseudomonas putida
F1]
gi|388563380|gb|AFK72521.1| extracellular solute-binding protein [Pseudomonas putida ND6]
gi|402755203|gb|EJX15678.1| extracellular solute-binding protein [Pseudomonas putida LS46]
Length = 362
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
DV VA G+S DV A R VA +PK G++LW DL AIP
Sbjct: 229 DVCVAFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|398891703|ref|ZP_10645010.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398186574|gb|EJM73945.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 361
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R ++ +P+ GA++W D+ A+PA +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAKEAKNGIDIGYSIPREGAAIWFDMVAMPADA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|383113173|ref|ZP_09933948.1| hypothetical protein BSGG_4893 [Bacteroides sp. D2]
gi|313697358|gb|EFS34193.1| hypothetical protein BSGG_4893 [Bacteroides sp. D2]
Length = 443
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ + V V VP+ G+++W D W IP +R N A+ + I
Sbjct: 249 WLNMTWSGDAIWAIEEANAVGVDLDYEVPEEGSNIWYDGWVIPKYAR----NPEAASYFI 304
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTL---VKLPEELLKGKPSLGTDLIAG 144
+ P + + F V +P LE TTL L G S+ D I
Sbjct: 305 NFMCRPDIALRNMDFCGYVSSIATPEILEEKIDTTLHYYSDLSYFFGPGADSVQIDKIQ- 363
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 364 YPDRKVVERCAMIRDFGDKTKEVL 387
>gi|145223724|ref|YP_001134402.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK]
gi|145216210|gb|ABP45614.1| extracellular solute-binding protein, family 1 [Mycobacterium
gilvum PYR-GCK]
Length = 393
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 24/142 (16%)
Query: 21 GVVKLYT---LSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 77
G ++ +T ++ ++ VA +S DV+ ++ +VP+SG + + D IP
Sbjct: 246 GQIRRFTGNDYADDLAAGNIAVAQAYSGDVVQLQADNPDLQFIVPQSGGTTFLDTMVIPY 305
Query: 78 ASRLHKTNWRASQWSISIDPSMDRI----LLPFKQEVIPGTSPSALETTLVKLPEELLKG 133
++ K A W ID DR L+ F Q +P L ++ EEL K
Sbjct: 306 TTQNQKA---AEAW---IDYVYDRANYAKLVAFTQ-FVP---------VLSEMTEELEKV 349
Query: 134 KPSLGTDLIAGVPPAEILARCE 155
P+ ++ + PPA++L RC+
Sbjct: 350 DPAAASNPLIN-PPADVLERCK 370
>gi|237719288|ref|ZP_04549769.1| spermidine/putrescine ABC transporter [Bacteroides sp. 2_2_4]
gi|229451148|gb|EEO56939.1| spermidine/putrescine ABC transporter [Bacteroides sp. 2_2_4]
Length = 443
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ + V V VP+ G+++W D W IP +R N A+ + I
Sbjct: 249 WLNMTWSGDAIWAIEEANAVGVDLDYEVPEEGSNIWYDGWVIPKYAR----NPEAASYFI 304
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTL---VKLPEELLKGKPSLGTDLIAG 144
+ P + + F V +P LE TTL L G S+ D I
Sbjct: 305 NFMCRPDIALRNMDFCGYVSSIATPEILEEKIDTTLHYYSDLSYFFGPGADSVQIDKIQ- 363
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 364 YPDRKVVERCAMIRDFGDKTKEVL 387
>gi|398976671|ref|ZP_10686537.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
gi|398139000|gb|EJM28009.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
Length = 361
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R + +PK GA++W D+ A+PA +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAKEAKNGIEIGYEIPKEGAAIWFDMVAMPADA 277
Query: 80 RLHKTNWRASQWSISID 96
K + + + D
Sbjct: 278 PDEKAGYAFMNYLLQPD 294
>gi|383778932|ref|YP_005463498.1| putative ABC transporter substrate-binding protein [Actinoplanes
missouriensis 431]
gi|381372164|dbj|BAL88982.1| putative ABC transporter substrate-binding protein [Actinoplanes
missouriensis 431]
Length = 403
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 21 GVVKLY---TLSEAFGIRDVWVAVGWSSDVLPA-VKRMSNVAVVVPKSGASLWADLWAIP 76
G+V+ Y T +A G +VW+ WS D+ V ++ VVP+ G ++W D IP
Sbjct: 243 GIVRQYYDQTYIDALGKGEVWITQAWSGDIFQKNVSDGTDFKFVVPEEGGTIWTDNMTIP 302
>gi|13475822|ref|NP_107392.1| ABC transporter substrate-binding protein [Mesorhizobium loti
MAFF303099]
gi|14026581|dbj|BAB53178.1| ABC transporter, periplasmic binding-protein [Mesorhizobium loti
MAFF303099]
Length = 365
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D +++GWS DVL A R NV ++P+ G +W D AIPA ++
Sbjct: 232 DKCISIGWSGDVLQAKNRAKEAKNGVNVEYLIPREGTYMWFDNLAIPADAK 282
>gi|163744970|ref|ZP_02152330.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Oceanibulbus indolifex HEL-45]
gi|161381788|gb|EDQ06197.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Oceanibulbus indolifex HEL-45]
Length = 361
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 31 AFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
A DV VAVGWS D+L A R + VA P GA +W D AIP
Sbjct: 223 ALANGDVCVAVGWSGDILQARDRAAEADNGVEVAYNAPSEGAQMWFDQMAIP 274
>gi|315444052|ref|YP_004076931.1| spermidine/putrescine-binding periplasmic protein [Mycobacterium
gilvum Spyr1]
gi|315262355|gb|ADT99096.1| spermidine/putrescine-binding periplasmic protein [Mycobacterium
gilvum Spyr1]
Length = 393
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 24/142 (16%)
Query: 21 GVVKLYT---LSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 77
G ++ +T ++ ++ VA +S DV+ ++ +VP+SG + + D IP
Sbjct: 246 GQIRRFTGNDYADDLAAGNIAVAQAYSGDVVQLQADNPDLQFIVPQSGGTTFLDTMVIPY 305
Query: 78 ASRLHKTNWRASQWSISIDPSMDRI----LLPFKQEVIPGTSPSALETTLVKLPEELLKG 133
++ K A W ID DR L+ F Q +P L ++ EEL K
Sbjct: 306 TTQNQKA---AEAW---IDYVYDRANYAKLVAFTQ-FVP---------VLSEMTEELEKV 349
Query: 134 KPSLGTDLIAGVPPAEILARCE 155
P+ ++ + PPA++L RC+
Sbjct: 350 DPAAASNPLIN-PPADVLERCK 370
>gi|238753457|ref|ZP_04614820.1| Putrescine-binding periplasmic protein [Yersinia ruckeri ATCC
29473]
gi|238708410|gb|EEQ00765.1| Putrescine-binding periplasmic protein [Yersinia ruckeri ATCC
29473]
Length = 369
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ DV+ A R NVA +PK GA + D++A+P ++
Sbjct: 236 DICVAVGWAGDVMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPTDAK 286
>gi|398995637|ref|ZP_10698514.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398129457|gb|EJM18824.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 361
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R ++ +PK GA++W D+ A+P +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAKEANNGIDIGYAIPKEGAAIWFDMVAMPTDA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|386817903|ref|ZP_10105121.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
gi|386422479|gb|EIJ36314.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
Length = 343
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 24/131 (18%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
E F DV + + WS + A K ++ + PK GASLW D AI A +
Sbjct: 211 EPFLAGDVNLGMIWSGEASQAQKENKDIHYIYPKEGASLWVDNLAITAGAE--------- 261
Query: 90 QWSISIDPS---MDRILLP-FKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGV 145
++D + +D +L P ++++ S T L E ++ P +
Sbjct: 262 ----NVDNAHKFIDYMLRPKVAKQMVEKLGYSTPNTAARVLVSEAIRNDPII-------F 310
Query: 146 PPAEILARCEF 156
PPAEIL + EF
Sbjct: 311 PPAEILEKGEF 321
>gi|399000556|ref|ZP_10703281.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
gi|398129524|gb|EJM18884.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
Length = 361
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D++ A R ++ +PK GA++W D+ A+PA +
Sbjct: 220 YTSDLANG--DICVAVGFSGDIIQAENRAKEAGNGVDIGYSIPKEGAAIWFDMVAMPADA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|149204428|ref|ZP_01881395.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Roseovarius sp. TM1035]
gi|149142313|gb|EDM30360.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Roseovarius sp. TM1035]
Length = 362
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRM----SNVAVV--VPKSGASLWADLWAIP 76
A D+ VAVGWS D+L A R + V +V PK GA +W D AIP
Sbjct: 223 NALANGDICVAVGWSGDILQARDRAAEADNGVEIVYNAPKEGAQMWFDQMAIP 275
>gi|29346698|ref|NP_810201.1| spermidine/putrescine ABC transporter [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338595|gb|AAO76395.1| spermidine/putrescine ABC transporter [Bacteroides thetaiotaomicron
VPI-5482]
Length = 449
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 16/143 (11%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ + V V VVPK G+++W D W IP ++ N A+ + I
Sbjct: 253 WLNMTWSGDAIWAIEEANAVGVDLDYVVPKEGSNIWYDGWVIPKYAK----NPVAASYFI 308
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTLVKLPEELLKGKPSLGTDLIAGV-- 145
+ P + + F V +P LE TTL + P + I +
Sbjct: 309 NFMCRPDIALRNMDFCGYVSSIATPEILEEKVDTTLDYYADLSYFFDPDADSIQIDKIQY 368
Query: 146 PPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 369 PDRKVVERCAMIRDFGDKTKEVL 391
>gi|395647571|ref|ZP_10435421.1| periplasmic putrescine-binding protein, PotF family [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 359
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S DVL A R + +PK GA++W D+ A+PA +
Sbjct: 218 YTGDLANG--DICVAVGFSGDVLQAESRAKEAKNGVKIGYQIPKEGAAIWFDMVAMPADA 275
Query: 80 RLHKTNW 86
K +
Sbjct: 276 PDEKAGY 282
>gi|13194613|gb|AAK15488.1|AF323694_3 PotF2 [Pseudomonas fluorescens]
Length = 365
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 76
++ VA G+S D+ A R S +A V+PK G +LW D+ AIP
Sbjct: 232 EICVAAGFSGDIFQAAARASEAGKGVEIAYVIPKEGGNLWFDMLAIP 278
>gi|452750133|ref|ZP_21949885.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
gi|452005783|gb|EMD98063.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
Length = 361
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
++ VA G+S DV A R +A +PK GA+LW D+ AIPA
Sbjct: 228 NICVAAGFSGDVFQAAARAEEAGKGVEIAYAIPKEGANLWFDMLAIPA 275
>gi|359395656|ref|ZP_09188708.1| Putrescine-binding periplasmic protein [Halomonas boliviensis LC1]
gi|357969921|gb|EHJ92368.1| Putrescine-binding periplasmic protein [Halomonas boliviensis LC1]
Length = 367
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ V+ G+S D+ A +R ++ +PK GA+LW D+ A+PA
Sbjct: 234 DICVSAGYSGDIFQAAERAEEAGRDFSIGYSIPKEGAALWFDMMAVPA 281
>gi|443472342|ref|ZP_21062371.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
gi|442902684|gb|ELS28200.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
Length = 364
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
D+ VA G+S D+ A R +A +PK G +LW D+ A+PA
Sbjct: 231 DICVAAGFSGDIFQAASRAEEAGKGIEIAYAIPKEGGNLWFDMLAVPA 278
>gi|398920165|ref|ZP_10659122.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398168452|gb|EJM56468.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 361
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R ++ +P+ GA++W D+ A+PA +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAREANNGIDIGYSIPREGAAIWFDMVAMPADA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|398858172|ref|ZP_10613864.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
gi|398239484|gb|EJN25191.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
Length = 361
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D++ A R ++ +PK GA++W D+ A+PA +
Sbjct: 220 YTSDLANG--DICVAVGFSGDIIQAENRAKEARNGVDIGYSIPKEGAAIWFDMVAMPADA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|392423251|ref|YP_006459855.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
gi|390985439|gb|AFM35432.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
Length = 361
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
++ VA G+S DV A R +A +PK GA+LW D+ AIPA
Sbjct: 228 NICVAAGFSGDVFQAAARAEEAGKGVEIAYAIPKEGANLWFDMLAIPA 275
>gi|238794852|ref|ZP_04638452.1| Putrescine-binding periplasmic protein [Yersinia intermedia ATCC
29909]
gi|238725795|gb|EEQ17349.1| Putrescine-binding periplasmic protein [Yersinia intermedia ATCC
29909]
Length = 369
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ D++ A R NVA +PK GA + D++A+P+ ++
Sbjct: 236 DICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAK 286
>gi|238795802|ref|ZP_04639315.1| Putrescine-binding periplasmic protein [Yersinia mollaretii ATCC
43969]
gi|238720265|gb|EEQ12068.1| Putrescine-binding periplasmic protein [Yersinia mollaretii ATCC
43969]
Length = 369
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ D++ A R NVA +PK GA + D++A+P+ ++
Sbjct: 236 DICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPSDAK 286
>gi|312193930|ref|YP_004013991.1| extracellular solute-binding protein [Frankia sp. EuI1c]
gi|311225266|gb|ADP78121.1| extracellular solute-binding protein family 1 [Frankia sp. EuI1c]
Length = 414
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 21 GVVKLYTLS---EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
G+V+ Y +A D+W+++ WS DV N+ VVPK G W D IP
Sbjct: 270 GIVRKYYDQGYIDALASGDLWLSMAWSGDVYQQQAGGKNLKFVVPKEGGLFWTDNMCIP 328
>gi|218532276|ref|YP_002423092.1| family 1 extracellular solute-binding protein [Methylobacterium
extorquens CM4]
gi|218524579|gb|ACK85164.1| extracellular solute-binding protein family 1 [Methylobacterium
extorquens CM4]
Length = 367
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 21 GVVKLYTLSE---AFGIRDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWAD 71
G V+ + SE DV +AVG+S DV+ A KR +A +PK GA +W D
Sbjct: 216 GAVRKFHSSEYVNGLANGDVCLAVGYSGDVMQAKKRAEESKNGIEIAYFIPKEGALMWFD 275
Query: 72 LWAIP 76
+A+P
Sbjct: 276 AFAVP 280
>gi|226314011|ref|YP_002773907.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus brevis NBRC 100599]
gi|226096961|dbj|BAH45403.1| spermidine/putrescine ABC transporter substrate binding protein
[Brevibacillus brevis NBRC 100599]
Length = 351
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 35 RDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ W+ WS D + +V V+PK GA++WAD AIP ++
Sbjct: 224 EEAWIGTVWSGDAAFIHAQNPDVEYVIPKEGATIWADTMAIPKGAK 269
>gi|114763504|ref|ZP_01442909.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pelagibaca bermudensis HTCC2601]
gi|114543784|gb|EAU46796.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Roseovarius sp. HTCC2601]
Length = 368
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 31 AFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
A DV VAVGWS D+L A R + V+ P GA +W D AIP
Sbjct: 230 ALANGDVCVAVGWSGDILQARDRAAEADNGVEVSYYAPDEGAQMWFDQMAIP 281
>gi|345887621|ref|ZP_08838790.1| hypothetical protein HMPREF0178_01564 [Bilophila sp. 4_1_30]
gi|345041620|gb|EGW45761.1| hypothetical protein HMPREF0178_01564 [Bilophila sp. 4_1_30]
Length = 345
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
+AF +V + W+ D A++ ++ +VP+ G +W D +AIPA + HK N A
Sbjct: 213 QAFISEEVVAGLAWNGDAFIAMQENPDLEFIVPEEGMLIWLDNFAIPAGAE-HKEN--AY 269
Query: 90 QW-SISIDPSMDRILLPFKQEVIPGTS------PSALETTLVKL-PEELLKGK 134
++ S + P + ++ + P + P E+ ++ L PEEL KG+
Sbjct: 270 KFISYLMRPEVAKLCVEEFNYSTPNKAAEKILEPEYAESKVIVLDPEELAKGE 322
>gi|85706011|ref|ZP_01037107.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Roseovarius sp. 217]
gi|85669599|gb|EAQ24464.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Roseovarius sp. 217]
Length = 362
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRM----SNVAVV--VPKSGASLWADLWAIP 76
A D+ VAVGWS D+L A R + V +V PK GA +W D AIP
Sbjct: 223 NALANGDICVAVGWSGDILQARDRAAEADNGVEIVYNAPKEGAQMWFDQMAIP 275
>gi|387889855|ref|YP_006320153.1| putrescine-binding periplasmic protein [Escherichia blattae DSM
4481]
gi|414592478|ref|ZP_11442128.1| putrescine ABC transporter substrate-binding periplasmic protein
[Escherichia blattae NBRC 105725]
gi|386924688|gb|AFJ47642.1| putrescine-binding periplasmic protein precursor [Escherichia
blattae DSM 4481]
gi|403196547|dbj|GAB79780.1| putrescine ABC transporter substrate-binding periplasmic protein
[Escherichia blattae NBRC 105725]
Length = 369
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
DV VA+GWS DVL A R S ++A +PK GA + D +AI A ++
Sbjct: 236 DVCVAIGWSGDVLQAANRASEAKNGVHIAYSIPKEGAIGYFDNFAITADAK 286
>gi|339487683|ref|YP_004702211.1| extracellular solute-binding protein [Pseudomonas putida S16]
gi|338838526|gb|AEJ13331.1| extracellular solute-binding protein [Pseudomonas putida S16]
Length = 403
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
DV VA G+S DV A R +A +PK G++LW DL AIP
Sbjct: 270 DVCVAFGYSGDVFQAANRAVEAKNGVKIAYSIPKEGSNLWFDLLAIP 316
>gi|317485961|ref|ZP_07944816.1| bacterial extracellular solute-binding protein [Bilophila
wadsworthia 3_1_6]
gi|316922734|gb|EFV43965.1| bacterial extracellular solute-binding protein [Bilophila
wadsworthia 3_1_6]
Length = 345
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
+AF +V + W+ D A++ ++ +VP+ G +W D +AIPA + HK N A
Sbjct: 213 QAFISEEVVAGLAWNGDAFIAMQENPDLEFIVPEEGMLIWLDNFAIPAGAE-HKEN--AY 269
Query: 90 QW-SISIDPSMDRILLPFKQEVIPGTS------PSALETTLVKL-PEELLKGK 134
++ S + P + ++ + P + P E+ ++ L PEEL KG+
Sbjct: 270 KFISYLMRPEVAKLCVEEFNYSTPNKAAEKILEPEYAESKVIVLDPEELAKGE 322
>gi|407368003|ref|ZP_11114535.1| extracellular solute-binding protein [Pseudomonas mandelii JR-1]
Length = 355
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
D+ +A+G+S D+ A R N+A +PK G +LW D+ AIP
Sbjct: 222 DICIAIGFSGDMFQAKARAEEAGKGMNIAYSIPKEGGALWFDMLAIP 268
>gi|384919869|ref|ZP_10019899.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citreicella sp. 357]
gi|384466255|gb|EIE50770.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citreicella sp. 357]
Length = 361
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
A D+ VAVGWS DVL A R + +A P GA +W D AIP
Sbjct: 222 NALANGDICVAVGWSGDVLQARDRAAEAGNGVEIAYYAPDEGAQMWFDEMAIP 274
>gi|298387173|ref|ZP_06996726.1| spermidine/putrescine ABC transporter [Bacteroides sp. 1_1_14]
gi|298259842|gb|EFI02713.1| spermidine/putrescine ABC transporter [Bacteroides sp. 1_1_14]
Length = 449
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ + V V VVPK G+++W D W IP ++ N A+ + I
Sbjct: 253 WLNMTWSGDAIWAIEEANAVGVDLDYVVPKEGSNIWYDGWVIPKYAK----NPVAASYFI 308
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTL---VKLPEELLKGKPSLGTDLIAG 144
+ P + + F V +P LE TTL L S+ D I
Sbjct: 309 NFMCRPDIALRNMDFCGYVSSIATPEILEEKVDTTLDYYADLSYFFGPDADSIQIDKIQ- 367
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 368 YPDRKVVERCAMIRDFGDKTKEVL 391
>gi|26989866|ref|NP_745291.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
putida KT2440]
gi|24984773|gb|AAN68755.1|AE016507_6 periplasmic polyamine-binding protein, putative [Pseudomonas putida
KT2440]
Length = 362
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
DV +A G+S DV A R VA +PK G++LW DL AIP
Sbjct: 229 DVCIAFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|386012138|ref|YP_005930415.1| Periplasmic polyamine-binding protein, putative [Pseudomonas putida
BIRD-1]
gi|313498844|gb|ADR60210.1| Periplasmic polyamine-binding protein, putative [Pseudomonas putida
BIRD-1]
Length = 362
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
DV +A G+S DV A R VA +PK G++LW DL AIP
Sbjct: 229 DVCIAFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|153806124|ref|ZP_01958792.1| hypothetical protein BACCAC_00379 [Bacteroides caccae ATCC 43185]
gi|149130801|gb|EDM22007.1| ABC transporter, solute-binding protein [Bacteroides caccae ATCC
43185]
Length = 439
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ + V V VP G+++W D W IP ++ N +A+ + I
Sbjct: 249 WLNMTWSGDAIWAIEEANAVGVDLDYEVPDEGSNIWYDGWVIPKYAK----NPQAASYFI 304
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTL---VKLPEELLKGKPSLGTDLIAG 144
+ P + + F V +P LE TTL L G S+ D I
Sbjct: 305 NFMCRPDIALRNMDFCGYVSSIATPEILEEKVDTTLDYYADLSYFFGPGADSIQIDKIQ- 363
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 364 YPDRKVVERCAMIRDFGDKTKEVL 387
>gi|408357686|ref|YP_006846217.1| spermidine/putrescine ABC transporter substrate-binding protein
[Amphibacillus xylanus NBRC 15112]
gi|407728457|dbj|BAM48455.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Amphibacillus xylanus NBRC 15112]
Length = 357
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 17/138 (12%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISIDPS 98
V++ WS D + + VVP+ G++LW D IP + N + I+
Sbjct: 232 VSIAWSGDARDIMWENEALTYVVPEEGSNLWFDNMVIPKTA----DNIEGAHQFINF--M 285
Query: 99 MDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEFLE 158
+D + E + ++P+ ++ + LPEE++ + PPAE+ R E E
Sbjct: 286 LDPEIAALNTEYVSYSTPN--QSAIELLPEEMVGDE--------RFYPPAELTERLEVYE 335
Query: 159 PLSEATFDVLRWLKFLRF 176
L + L FL+F
Sbjct: 336 NLGREMLSLYNEL-FLQF 352
>gi|157960774|ref|YP_001500808.1| extracellular solute-binding protein [Shewanella pealeana ATCC
700345]
gi|157845774|gb|ABV86273.1| extracellular solute-binding protein family 1 [Shewanella pealeana
ATCC 700345]
Length = 366
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S D+ A R + + +PK G++LW D+ AIPA
Sbjct: 233 DICVAFGYSGDIFQAADRADEAENGNTIEYSIPKEGSNLWFDMLAIPA 280
>gi|422658420|ref|ZP_16720854.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. lachrymans str. M302278]
gi|331017047|gb|EGH97103.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. lachrymans str. M302278]
Length = 364
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSTPKEGGNLWFDMLAIPADSK 281
>gi|398816806|ref|ZP_10575447.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. BC25]
gi|398031945|gb|EJL25313.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. BC25]
Length = 351
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 35 RDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+ W+ WS D + +V V+PK GA++WAD AIP ++
Sbjct: 224 EEAWIGTVWSGDAAFIHAQNPDVEYVIPKEGATIWADTLAIPKGAK 269
>gi|313147464|ref|ZP_07809657.1| spermidine/putrescine ABC transporter [Bacteroides fragilis 3_1_12]
gi|313136231|gb|EFR53591.1| spermidine/putrescine ABC transporter [Bacteroides fragilis 3_1_12]
Length = 444
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D A++ V V VP+ G+++W D W IP + N +A+ + I
Sbjct: 251 WLNMTWSGDAKWAIEEADAVGVELDYAVPREGSNIWYDGWVIPK----YAGNPKAASYFI 306
Query: 94 SIDPSMDRILLPFKQE--VIPGTSPSALE----TTLV---KLPEELLKGKPSLGTDLIAG 144
+ D L + V SP +E TTL L G SL D I
Sbjct: 307 NFMCRPDIALRNMEASGYVSAVASPEIMEAKVDTTLTYYSDLSYFFGPGADSLQIDKIQ- 365
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P E++ RC + + T +VL
Sbjct: 366 YPDREVVERCAMIRDFGDKTKEVL 389
>gi|300022947|ref|YP_003755558.1| family 1 extracellular solute-binding protein [Hyphomicrobium
denitrificans ATCC 51888]
gi|299524768|gb|ADJ23237.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans ATCC 51888]
Length = 370
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASR 80
D+ +AVG+S D+L A K + +PK GA +W D AIPA ++
Sbjct: 237 DICIAVGYSGDILQARTRAQEAKNGQEIGYSLPKQGAQMWFDEMAIPADAK 287
>gi|424663908|ref|ZP_18100945.1| hypothetical protein HMPREF1205_04294 [Bacteroides fragilis HMW
616]
gi|404577598|gb|EKA82336.1| hypothetical protein HMPREF1205_04294 [Bacteroides fragilis HMW
616]
Length = 444
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D A++ V V VP+ G+++W D W IP + N +A+ + I
Sbjct: 251 WLNMTWSGDAKWAIEEADAVGVELDYAVPREGSNIWYDGWVIPK----YAGNPKAASYFI 306
Query: 94 SIDPSMDRILLPFKQE--VIPGTSPSALE----TTLV---KLPEELLKGKPSLGTDLIAG 144
+ D L + V SP +E TTL L G SL D I
Sbjct: 307 NFMCRPDIALRNMEASGYVSAVASPEIMEAKVDTTLTYYSDLSYFFGPGADSLQIDKIQ- 365
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P E++ RC + + T +VL
Sbjct: 366 YPDREVVERCAMIRDFGDKTKEVL 389
>gi|346994151|ref|ZP_08862223.1| polyamine ABC transporter periplasmic polyamine-binding protein
PotD [Ruegeria sp. TW15]
Length = 387
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 20/123 (16%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D W+ + W+ D M +A V+ G LW+D +AIP + +
Sbjct: 262 DAWMTMCWTGDGKQMNVDMPEIAYVLGAEGGELWSDYYAIPKGAPHMDAAYAL------- 314
Query: 96 DPSMDRILLP--FKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILAR 153
+D +L P +EV+ PSA T LP+ELL+ P L P A++L
Sbjct: 315 ---IDFLLNPEVNAKEVLAHGYPSADARTNALLPKELLE-DPIL-------YPAADLLNA 363
Query: 154 CEF 156
EF
Sbjct: 364 LEF 366
>gi|411011631|ref|ZP_11387960.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas
aquariorum AAK1]
gi|423198744|ref|ZP_17185327.1| hypothetical protein HMPREF1171_03359 [Aeromonas hydrophila SSU]
gi|404629934|gb|EKB26659.1| hypothetical protein HMPREF1171_03359 [Aeromonas hydrophila SSU]
Length = 359
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
++ VA G+S D+L A R +A +PK G +LW D+ AIPA
Sbjct: 226 NICVAAGFSGDILQAAARAEEAGKGIKIAYSIPKEGGNLWFDMMAIPA 273
>gi|21243209|ref|NP_642791.1| periplasmic putrescine-binding protein [Xanthomonas axonopodis pv.
citri str. 306]
gi|21108736|gb|AAM37327.1| periplasmic putrescine-binding protein [Xanthomonas axonopodis pv.
citri str. 306]
Length = 371
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
Y S A G + +AVGWS D++ A R + VA +PK GA W D+ AIP +
Sbjct: 230 YVTSLANG--NTCLAVGWSGDIIQARDRAAEAGNNIKVAYAIPKEGAPQWFDMLAIPKDA 287
Query: 80 RLHKTNWRA 88
+ H N A
Sbjct: 288 K-HPDNAYA 295
>gi|424923175|ref|ZP_18346536.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304335|gb|EJZ58297.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 363
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
YT A G D+ VA+G+S DV+ A R ++ ++PK G +LW D+ AIP
Sbjct: 222 YTSDLANG--DICVAIGYSGDVMQAQTRAREAGKNIDIRYLIPKEGVNLWFDMLAIP 276
>gi|213971986|ref|ZP_03400083.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato T1]
gi|301384876|ref|ZP_07233294.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato Max13]
gi|302062784|ref|ZP_07254325.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato K40]
gi|302133837|ref|ZP_07259827.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213923248|gb|EEB56846.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato T1]
Length = 364
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSTPKEGGNLWFDMLAIPADSK 281
>gi|380695921|ref|ZP_09860780.1| spermidine/putrescine ABC transporter [Bacteroides faecis MAJ27]
Length = 458
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ + V V VVPK G+++W D W IP ++ N A+ + I
Sbjct: 262 WLNMTWSGDAIWAIEEANAVGVDLDYVVPKEGSNIWYDGWVIPKYAK----NPVAASYFI 317
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTL---VKLPEELLKGKPSLGTDLIAG 144
+ P + + F V +P LE TTL L S+ D I
Sbjct: 318 NFMCRPDIALRNMDFCGYVSSIATPEILEEKVDTTLDYYADLSYFFGPDADSIQIDKIQ- 376
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 377 YPDRKVVERCAMIRDFGDKTKEVL 400
>gi|167622935|ref|YP_001673229.1| extracellular solute-binding protein [Shewanella halifaxensis
HAW-EB4]
gi|167352957|gb|ABZ75570.1| extracellular solute-binding protein family 1 [Shewanella
halifaxensis HAW-EB4]
Length = 366
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S D+ A R + + +PK G++LW D+ AIPA
Sbjct: 233 DICVAFGYSGDIFQAADRADEAENGNTIEYSIPKEGSNLWFDMLAIPA 280
>gi|426409449|ref|YP_007029548.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
gi|426267666|gb|AFY19743.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
Length = 361
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R ++ +PK GA++W D+ A+P +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAREANNGIDIGYAIPKEGAAIWFDMVAMPVDA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|28872418|ref|NP_795037.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato str. DC3000]
gi|28855673|gb|AAO58732.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 374
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A PK G +LW D+ AIPA S+
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAGKGVKLAYSTPKEGGNLWFDMLAIPADSK 281
>gi|333899501|ref|YP_004473374.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333114766|gb|AEF21280.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 358
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
DV +AVG+S D++ A R ++A V+PK GA +W D+ A+P
Sbjct: 225 DVCMAVGFSGDIMQASARAKEAGNGVDIAYVIPKEGAPMWFDMVAMP 271
>gi|398948605|ref|ZP_10672891.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398160399|gb|EJM48669.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 361
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R ++ +PK GA++W D+ A+P +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAREANNGIDIGYAIPKEGAAIWFDMVAMPVDA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|433678591|ref|ZP_20510433.1| Spermidine/putrescine-binding periplasmic protein Short=SPBP
[Xanthomonas translucens pv. translucens DSM 18974]
gi|430816298|emb|CCP40931.1| Spermidine/putrescine-binding periplasmic protein [Xanthomonas
translucens pv. translucens DSM 18974]
Length = 374
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
Y S A G + +AVGWS D++ A R +VA +PK GA W D+ AIP +
Sbjct: 233 YVTSLANG--NTCLAVGWSGDIIQARDRAEEAKDGVHVAYSIPKEGAPQWFDMLAIPKDA 290
Query: 80 RLHKTNWR 87
+ + ++
Sbjct: 291 KHPQNAYK 298
>gi|220924807|ref|YP_002500109.1| family 1 extracellular solute-binding protein [Methylobacterium
nodulans ORS 2060]
gi|219949414|gb|ACL59806.1| extracellular solute-binding protein family 1 [Methylobacterium
nodulans ORS 2060]
Length = 366
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
DV ++VG+S DVL A KR ++A +P+ GA +W D +AIP
Sbjct: 233 DVCLSVGYSGDVLQARKRAQEAKNDVDIAYYIPQQGALMWFDSFAIP 279
>gi|149913022|ref|ZP_01901556.1| hypothetical protein RAZWK3B_03500 [Roseobacter sp. AzwK-3b]
gi|149813428|gb|EDM73254.1| hypothetical protein RAZWK3B_03500 [Roseobacter sp. AzwK-3b]
Length = 361
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRM----SNVAVV--VPKSGASLWADLWAIP 76
D+ VAVGWS D+L A R + V ++ PK GA +W D AIP
Sbjct: 228 DICVAVGWSGDILQARDRAAEADNGVEIIYNAPKEGAQMWFDQMAIP 274
>gi|149203212|ref|ZP_01880182.1| ABC permidine/putrescine transporter, periplasmic substrate-binding
protein [Roseovarius sp. TM1035]
gi|149143045|gb|EDM31084.1| ABC permidine/putrescine transporter, periplasmic substrate-binding
protein [Roseovarius sp. TM1035]
Length = 399
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 20/123 (16%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D W+ + W+ D + +A + K G +W+D +AIP + R + +++
Sbjct: 274 DAWLTMCWTGDGKQLNTDLPEIAFALGKEGGEIWSDYYAIPVGAP-----HREAAYAL-- 326
Query: 96 DPSMDRILLP--FKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILAR 153
+D +L P +E + P A T LPEELL P L P AE L
Sbjct: 327 ---IDYLLAPEVNAREALAHGYPVADARTNALLPEELLN-DPIL-------YPAAEALNA 375
Query: 154 CEF 156
EF
Sbjct: 376 LEF 378
>gi|22126728|ref|NP_670151.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis KIM10+]
gi|45441089|ref|NP_992628.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis biovar Microtus str. 91001]
gi|21959748|gb|AAM86402.1|AE013887_9 periplasmic putrescine-binding protein of putrescine ABC
transporter [Yersinia pestis KIM10+]
gi|45435948|gb|AAS61505.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
biovar Microtus str. 91001]
Length = 408
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ D++ A R NVA +PK GA + D++A+P ++
Sbjct: 275 DICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPTDAK 325
>gi|398969425|ref|ZP_10682877.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398142127|gb|EJM31031.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 365
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
D+ VA+G+S D+ A R +A +PK G +LW D+ AIP S
Sbjct: 232 DICVAIGFSGDIFQAKHRAEEAKKGVTIAYSIPKEGGALWFDMLAIPKDS 281
>gi|397688814|ref|YP_006526133.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
stutzeri DSM 10701]
gi|395810370|gb|AFN79775.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 10701]
Length = 361
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
++ +A G+S DV A R ++A +PK G +LW D+ AIPA ++
Sbjct: 228 NICIAAGFSGDVFQAAARADEAGKGIDIAYAIPKEGGNLWFDMLAIPADAQ 278
>gi|338738412|ref|YP_004675374.1| putrescine ABC transporter periplasmic-binding protein
[Hyphomicrobium sp. MC1]
gi|337758975|emb|CCB64800.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Hyphomicrobium sp. MC1]
Length = 372
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMS---NVAVV---VPKSGASLWADLWAIPAASR 80
A D +A+GWS D+L A R N V+ +PK G +W D+ AIPA ++
Sbjct: 233 NALANGDACMALGWSGDILQAASRAEEAKNGQVIKYNIPKEGTQMWFDMMAIPADAK 289
>gi|51595702|ref|YP_069893.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis IP 32953]
gi|108806618|ref|YP_650534.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Antiqua]
gi|108812810|ref|YP_648577.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Nepal516]
gi|145599638|ref|YP_001163714.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Pestoides F]
gi|149366690|ref|ZP_01888724.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CA88-4125]
gi|153950739|ref|YP_001401610.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis IP 31758]
gi|162421714|ref|YP_001606071.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Angola]
gi|165924359|ref|ZP_02220191.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165936192|ref|ZP_02224761.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. IP275]
gi|166009827|ref|ZP_02230725.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166211526|ref|ZP_02237561.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. B42003004]
gi|167399794|ref|ZP_02305312.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167419605|ref|ZP_02311358.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167424261|ref|ZP_02316014.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167469049|ref|ZP_02333753.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Yersinia pestis FV-1]
gi|170024955|ref|YP_001721460.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis YPIII]
gi|186894775|ref|YP_001871887.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis PB1/+]
gi|218928481|ref|YP_002346356.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis CO92]
gi|229841290|ref|ZP_04461449.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229843393|ref|ZP_04463539.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
India 195]
gi|229895767|ref|ZP_04510937.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Pestoides A]
gi|229903229|ref|ZP_04518342.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Nepal516]
gi|270487022|ref|ZP_06204096.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM
D27]
gi|294503326|ref|YP_003567388.1| putrescine-binding periplasmic protein [Yersinia pestis Z176003]
gi|384121769|ref|YP_005504389.1| putrescine-binding periplasmic protein [Yersinia pestis D106004]
gi|384125432|ref|YP_005508046.1| putrescine-binding periplasmic protein [Yersinia pestis D182038]
gi|384141038|ref|YP_005523740.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis A1122]
gi|384415312|ref|YP_005624674.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis biovar Medievalis str. Harbin 35]
gi|420546012|ref|ZP_15044054.1| putrescine-binding periplasmic protein [Yersinia pestis PY-01]
gi|420551322|ref|ZP_15048809.1| putrescine-binding periplasmic protein [Yersinia pestis PY-02]
gi|420556862|ref|ZP_15053699.1| putrescine-binding periplasmic protein [Yersinia pestis PY-03]
gi|420562420|ref|ZP_15058583.1| putrescine-binding periplasmic protein [Yersinia pestis PY-04]
gi|420567439|ref|ZP_15063123.1| putrescine-binding periplasmic protein [Yersinia pestis PY-05]
gi|420573088|ref|ZP_15068249.1| putrescine-binding periplasmic protein [Yersinia pestis PY-06]
gi|420578406|ref|ZP_15073065.1| putrescine-binding periplasmic protein [Yersinia pestis PY-07]
gi|420583781|ref|ZP_15077952.1| putrescine-binding periplasmic protein [Yersinia pestis PY-08]
gi|420588922|ref|ZP_15082586.1| putrescine-binding periplasmic protein [Yersinia pestis PY-09]
gi|420594243|ref|ZP_15087376.1| putrescine-binding periplasmic protein [Yersinia pestis PY-10]
gi|420599926|ref|ZP_15092456.1| putrescine-binding periplasmic protein [Yersinia pestis PY-11]
gi|420605403|ref|ZP_15097357.1| putrescine-binding periplasmic protein [Yersinia pestis PY-12]
gi|420610751|ref|ZP_15102191.1| putrescine-binding periplasmic protein [Yersinia pestis PY-13]
gi|420616055|ref|ZP_15106888.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-14]
gi|420621445|ref|ZP_15111640.1| putrescine-binding periplasmic protein [Yersinia pestis PY-15]
gi|420626498|ref|ZP_15116222.1| putrescine-binding periplasmic protein [Yersinia pestis PY-16]
gi|420631706|ref|ZP_15120929.1| putrescine-binding periplasmic protein [Yersinia pestis PY-19]
gi|420636814|ref|ZP_15125505.1| putrescine-binding periplasmic protein [Yersinia pestis PY-25]
gi|420642346|ref|ZP_15130505.1| putrescine-binding periplasmic protein [Yersinia pestis PY-29]
gi|420647544|ref|ZP_15135254.1| putrescine-binding periplasmic protein [Yersinia pestis PY-32]
gi|420653181|ref|ZP_15140319.1| putrescine-binding periplasmic protein [Yersinia pestis PY-34]
gi|420658704|ref|ZP_15145282.1| putrescine-binding periplasmic protein [Yersinia pestis PY-36]
gi|420663998|ref|ZP_15150017.1| putrescine-binding periplasmic protein [Yersinia pestis PY-42]
gi|420668962|ref|ZP_15154515.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-45]
gi|420674289|ref|ZP_15159368.1| putrescine-binding periplasmic protein [Yersinia pestis PY-46]
gi|420679845|ref|ZP_15164402.1| putrescine-binding periplasmic protein [Yersinia pestis PY-47]
gi|420685101|ref|ZP_15169109.1| putrescine-binding periplasmic protein [Yersinia pestis PY-48]
gi|420690277|ref|ZP_15173691.1| putrescine-binding periplasmic protein [Yersinia pestis PY-52]
gi|420696075|ref|ZP_15178772.1| putrescine-binding periplasmic protein [Yersinia pestis PY-53]
gi|420701483|ref|ZP_15183371.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-54]
gi|420707437|ref|ZP_15188236.1| putrescine-binding periplasmic protein [Yersinia pestis PY-55]
gi|420712778|ref|ZP_15193045.1| putrescine-binding periplasmic protein [Yersinia pestis PY-56]
gi|420718189|ref|ZP_15197781.1| putrescine-binding periplasmic protein [Yersinia pestis PY-58]
gi|420723771|ref|ZP_15202593.1| putrescine-binding periplasmic protein [Yersinia pestis PY-59]
gi|420729368|ref|ZP_15207586.1| putrescine-binding periplasmic protein [Yersinia pestis PY-60]
gi|420734446|ref|ZP_15212171.1| putrescine-binding periplasmic protein [Yersinia pestis PY-61]
gi|420739919|ref|ZP_15217101.1| putrescine-binding periplasmic protein [Yersinia pestis PY-63]
gi|420745304|ref|ZP_15221816.1| putrescine-binding periplasmic protein [Yersinia pestis PY-64]
gi|420751046|ref|ZP_15226754.1| putrescine-binding periplasmic protein [Yersinia pestis PY-65]
gi|420756368|ref|ZP_15231339.1| putrescine-binding periplasmic protein [Yersinia pestis PY-66]
gi|420762171|ref|ZP_15236104.1| putrescine-binding periplasmic protein [Yersinia pestis PY-71]
gi|420767417|ref|ZP_15240838.1| putrescine-binding periplasmic protein [Yersinia pestis PY-72]
gi|420772395|ref|ZP_15245313.1| putrescine-binding periplasmic protein [Yersinia pestis PY-76]
gi|420777841|ref|ZP_15250166.1| putrescine-binding periplasmic protein [Yersinia pestis PY-88]
gi|420783361|ref|ZP_15255003.1| putrescine-binding periplasmic protein [Yersinia pestis PY-89]
gi|420788694|ref|ZP_15259708.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-90]
gi|420794161|ref|ZP_15264645.1| putrescine-binding periplasmic protein [Yersinia pestis PY-91]
gi|420799283|ref|ZP_15269250.1| putrescine-binding periplasmic protein [Yersinia pestis PY-92]
gi|420804630|ref|ZP_15274064.1| putrescine-binding periplasmic protein [Yersinia pestis PY-93]
gi|420809886|ref|ZP_15278819.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-94]
gi|420815566|ref|ZP_15283914.1| putrescine-binding periplasmic protein [Yersinia pestis PY-95]
gi|420820764|ref|ZP_15288616.1| putrescine-binding periplasmic protein [Yersinia pestis PY-96]
gi|420825852|ref|ZP_15293170.1| putrescine-binding periplasmic protein [Yersinia pestis PY-98]
gi|420831629|ref|ZP_15298392.1| putrescine-binding periplasmic protein [Yersinia pestis PY-99]
gi|420836477|ref|ZP_15302761.1| putrescine-binding periplasmic protein [Yersinia pestis PY-100]
gi|420841626|ref|ZP_15307426.1| putrescine-binding periplasmic protein [Yersinia pestis PY-101]
gi|420847242|ref|ZP_15312495.1| putrescine-binding periplasmic protein [Yersinia pestis PY-102]
gi|420852680|ref|ZP_15317268.1| putrescine-binding periplasmic protein [Yersinia pestis PY-103]
gi|420858176|ref|ZP_15321956.1| putrescine-binding periplasmic protein [Yersinia pestis PY-113]
gi|421762784|ref|ZP_16199581.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis INS]
gi|51588984|emb|CAH20601.1| ABC type periplasmic putrescine/spermidine binding protein, potF
[Yersinia pseudotuberculosis IP 32953]
gi|108776458|gb|ABG18977.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Nepal516]
gi|108778531|gb|ABG12589.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Antiqua]
gi|115347092|emb|CAL19984.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CO92]
gi|145211334|gb|ABP40741.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Pestoides F]
gi|149291064|gb|EDM41139.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CA88-4125]
gi|152962234|gb|ABS49695.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pseudotuberculosis IP 31758]
gi|162354529|gb|ABX88477.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis Angola]
gi|165915806|gb|EDR34414.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. IP275]
gi|165923419|gb|EDR40551.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165991223|gb|EDR43524.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166207297|gb|EDR51777.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. B42003004]
gi|166962346|gb|EDR58367.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167050502|gb|EDR61910.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167057110|gb|EDR66873.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169751489|gb|ACA69007.1| extracellular solute-binding protein family 1 [Yersinia
pseudotuberculosis YPIII]
gi|186697801|gb|ACC88430.1| extracellular solute-binding protein family 1 [Yersinia
pseudotuberculosis PB1/+]
gi|229678999|gb|EEO75102.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Nepal516]
gi|229689740|gb|EEO81801.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
India 195]
gi|229697656|gb|EEO87703.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229700690|gb|EEO88719.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Pestoides A]
gi|262361365|gb|ACY58086.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
D106004]
gi|262365096|gb|ACY61653.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
D182038]
gi|270335526|gb|EFA46303.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM
D27]
gi|294353785|gb|ADE64126.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Z176003]
gi|320015816|gb|ADV99387.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342856167|gb|AEL74720.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis A1122]
gi|391429137|gb|EIQ91021.1| putrescine-binding periplasmic protein [Yersinia pestis PY-01]
gi|391430413|gb|EIQ92134.1| putrescine-binding periplasmic protein [Yersinia pestis PY-02]
gi|391431954|gb|EIQ93448.1| putrescine-binding periplasmic protein [Yersinia pestis PY-03]
gi|391445044|gb|EIR05211.1| putrescine-binding periplasmic protein [Yersinia pestis PY-04]
gi|391445985|gb|EIR06067.1| putrescine-binding periplasmic protein [Yersinia pestis PY-05]
gi|391449804|gb|EIR09495.1| putrescine-binding periplasmic protein [Yersinia pestis PY-06]
gi|391461597|gb|EIR20195.1| putrescine-binding periplasmic protein [Yersinia pestis PY-07]
gi|391462641|gb|EIR21136.1| putrescine-binding periplasmic protein [Yersinia pestis PY-08]
gi|391464758|gb|EIR23010.1| putrescine-binding periplasmic protein [Yersinia pestis PY-09]
gi|391478057|gb|EIR35020.1| putrescine-binding periplasmic protein [Yersinia pestis PY-10]
gi|391479255|gb|EIR36070.1| putrescine-binding periplasmic protein [Yersinia pestis PY-12]
gi|391479435|gb|EIR36226.1| putrescine-binding periplasmic protein [Yersinia pestis PY-11]
gi|391493548|gb|EIR48888.1| putrescine-binding periplasmic protein [Yersinia pestis PY-13]
gi|391494646|gb|EIR49849.1| putrescine-binding periplasmic protein [Yersinia pestis PY-15]
gi|391497235|gb|EIR52109.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-14]
gi|391509359|gb|EIR62991.1| putrescine-binding periplasmic protein [Yersinia pestis PY-16]
gi|391510142|gb|EIR63704.1| putrescine-binding periplasmic protein [Yersinia pestis PY-19]
gi|391514371|gb|EIR67479.1| putrescine-binding periplasmic protein [Yersinia pestis PY-25]
gi|391524903|gb|EIR77080.1| putrescine-binding periplasmic protein [Yersinia pestis PY-29]
gi|391527667|gb|EIR79561.1| putrescine-binding periplasmic protein [Yersinia pestis PY-34]
gi|391528645|gb|EIR80444.1| putrescine-binding periplasmic protein [Yersinia pestis PY-32]
gi|391541013|gb|EIR91591.1| putrescine-binding periplasmic protein [Yersinia pestis PY-36]
gi|391543171|gb|EIR93528.1| putrescine-binding periplasmic protein [Yersinia pestis PY-42]
gi|391544275|gb|EIR94507.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-45]
gi|391558283|gb|EIS07178.1| putrescine-binding periplasmic protein [Yersinia pestis PY-46]
gi|391558950|gb|EIS07785.1| putrescine-binding periplasmic protein [Yersinia pestis PY-47]
gi|391560061|gb|EIS08733.1| putrescine-binding periplasmic protein [Yersinia pestis PY-48]
gi|391573487|gb|EIS20537.1| putrescine-binding periplasmic protein [Yersinia pestis PY-52]
gi|391574043|gb|EIS21001.1| putrescine-binding periplasmic protein [Yersinia pestis PY-53]
gi|391585571|gb|EIS30965.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-54]
gi|391585813|gb|EIS31176.1| putrescine-binding periplasmic protein [Yersinia pestis PY-55]
gi|391589491|gb|EIS34379.1| putrescine-binding periplasmic protein [Yersinia pestis PY-56]
gi|391602784|gb|EIS46038.1| putrescine-binding periplasmic protein [Yersinia pestis PY-60]
gi|391602825|gb|EIS46075.1| putrescine-binding periplasmic protein [Yersinia pestis PY-58]
gi|391604444|gb|EIS47452.1| putrescine-binding periplasmic protein [Yersinia pestis PY-59]
gi|391617103|gb|EIS58687.1| putrescine-binding periplasmic protein [Yersinia pestis PY-61]
gi|391617910|gb|EIS59408.1| putrescine-binding periplasmic protein [Yersinia pestis PY-63]
gi|391624218|gb|EIS64885.1| putrescine-binding periplasmic protein [Yersinia pestis PY-64]
gi|391628962|gb|EIS68955.1| putrescine-binding periplasmic protein [Yersinia pestis PY-65]
gi|391640283|gb|EIS78856.1| putrescine-binding periplasmic protein [Yersinia pestis PY-71]
gi|391641901|gb|EIS80245.1| putrescine-binding periplasmic protein [Yersinia pestis PY-66]
gi|391642643|gb|EIS80890.1| putrescine-binding periplasmic protein [Yersinia pestis PY-72]
gi|391652353|gb|EIS89417.1| putrescine-binding periplasmic protein [Yersinia pestis PY-76]
gi|391657874|gb|EIS94341.1| putrescine-binding periplasmic protein [Yersinia pestis PY-88]
gi|391662913|gb|EIS98807.1| putrescine-binding periplasmic protein [Yersinia pestis PY-89]
gi|391665174|gb|EIT00787.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-90]
gi|391671686|gb|EIT06596.1| putrescine-binding periplasmic protein [Yersinia pestis PY-91]
gi|391683384|gb|EIT17167.1| putrescine-binding periplasmic protein [Yersinia pestis PY-93]
gi|391684769|gb|EIT18392.1| putrescine-binding periplasmic protein [Yersinia pestis PY-92]
gi|391685532|gb|EIT19059.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-94]
gi|391697257|gb|EIT29662.1| putrescine-binding periplasmic protein [Yersinia pestis PY-95]
gi|391700935|gb|EIT32985.1| putrescine-binding periplasmic protein [Yersinia pestis PY-96]
gi|391702206|gb|EIT34126.1| putrescine-binding periplasmic protein [Yersinia pestis PY-98]
gi|391711411|gb|EIT42379.1| putrescine-binding periplasmic protein [Yersinia pestis PY-99]
gi|391717995|gb|EIT48287.1| putrescine-binding periplasmic protein [Yersinia pestis PY-100]
gi|391718497|gb|EIT48738.1| putrescine-binding periplasmic protein [Yersinia pestis PY-101]
gi|391729174|gb|EIT58194.1| putrescine-binding periplasmic protein [Yersinia pestis PY-102]
gi|391732267|gb|EIT60859.1| putrescine-binding periplasmic protein [Yersinia pestis PY-103]
gi|391736137|gb|EIT64190.1| putrescine-binding periplasmic protein [Yersinia pestis PY-113]
gi|411176990|gb|EKS47005.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis INS]
Length = 369
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ D++ A R NVA +PK GA + D++A+P ++
Sbjct: 236 DICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGALAFFDVFAMPTDAK 286
>gi|325275911|ref|ZP_08141758.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
gi|324098961|gb|EGB96960.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
Length = 359
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G DV V VG+S DVL A R V +PK GA LW D+ A+PA +
Sbjct: 218 YTGDLANG--DVCVVVGFSGDVLQAKNRAEEAHNGVKVGYSIPKEGAPLWFDMVAMPADA 275
Query: 80 RLHKTNW 86
K +
Sbjct: 276 PDEKAGY 282
>gi|114564172|ref|YP_751686.1| extracellular solute-binding protein [Shewanella frigidimarina
NCIMB 400]
gi|114335465|gb|ABI72847.1| extracellular solute-binding protein, family 1 [Shewanella
frigidimarina NCIMB 400]
Length = 366
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIP 76
D+ VA G+S DV A R + + +PK GA+LW D+ AIP
Sbjct: 233 DICVAFGFSGDVFQAAARADEAGNGNKIGYSIPKEGANLWFDMLAIP 279
>gi|429215499|ref|ZP_19206659.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. M1]
gi|428153906|gb|EKX00459.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. M1]
Length = 361
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
++ VA G+S DV A R +A +PK GA+LW DL AIP+
Sbjct: 228 NICVAFGYSGDVFQAAARAREAKNGIEIAYAIPKEGANLWFDLMAIPS 275
>gi|409418039|ref|ZP_11258050.1| extracellular solute-binding protein [Pseudomonas sp. HYS]
Length = 364
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R +A +PK G +LW D+ AIP S+
Sbjct: 231 DICVAAGFSGDVFQAKSRAEEAGKGVKLAYAIPKEGGNLWFDMLAIPKDSK 281
>gi|354586089|ref|ZP_09004762.1| extracellular solute-binding protein family 1 [Paenibacillus lactis
154]
gi|353183065|gb|EHB48597.1| extracellular solute-binding protein family 1 [Paenibacillus lactis
154]
Length = 350
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
W+A WS D + +VA VVP+ GA++++D +AIP ++
Sbjct: 226 WIATVWSGDAAFIAEENPDVAYVVPEEGATIFSDNYAIPKGAK 268
>gi|408479602|ref|ZP_11185821.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas sp. R81]
Length = 364
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
++ VA G+S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 231 NICVAAGFSGDVFQAKARAAEAGKGVNIAYTIPKEGGNLWFDVLAIP 277
>gi|407789477|ref|ZP_11136578.1| spermidine/putrescine-binding periplasmic protein [Gallaecimonas
xiamenensis 3-C-1]
gi|407206835|gb|EKE76785.1| spermidine/putrescine-binding periplasmic protein [Gallaecimonas
xiamenensis 3-C-1]
Length = 347
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 16/128 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
DV + + W+ +V A N+A + PK GA W D +A+P+ + R + +
Sbjct: 221 DVDIGMIWNGEVYMANNEGGNLAYIYPKEGAIFWVDSFAVPSHAEHPDAAHRFINYMMR- 279
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
P + + + + P AL LP+E LK P + P A +A+ E
Sbjct: 280 -PEVAKACVEYVGYATPNLPGKAL------LPDE-LKNSPVI-------FPDAATVAKGE 324
Query: 156 FLEPLSEA 163
F + +A
Sbjct: 325 FQTDVGDA 332
>gi|423225929|ref|ZP_17212396.1| hypothetical protein HMPREF1062_04582 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392631203|gb|EIY25179.1| hypothetical protein HMPREF1062_04582 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 440
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASR 80
W+ + WS D + A+ V V VVP+ G+++W D WAIP +R
Sbjct: 249 WLNLTWSGDAVWAIDEAEAVGVDLDYVVPREGSNIWYDGWAIPKYAR 295
>gi|402700317|ref|ZP_10848296.1| extracellular solute-binding protein [Pseudomonas fragi A22]
Length = 380
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 16/121 (13%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D W+A+ W+ D + + + + K G LW+D +AIP +S HK A + +
Sbjct: 255 DAWLAMSWTGDASQLHRDLPQMQYELGKEGGELWSDFFAIPKSSE-HKDAAYAF-INYLL 312
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
DP +++ EV+ PS + LP LL+ D I P AE L+ E
Sbjct: 313 DPQHNKL------EVLSHGYPSGDKRVDALLPVALLE-------DPIM-YPAAEALSPLE 358
Query: 156 F 156
F
Sbjct: 359 F 359
>gi|91794381|ref|YP_564032.1| extracellular solute-binding protein [Shewanella denitrificans
OS217]
gi|91716383|gb|ABE56309.1| extracellular solute-binding protein, family 1 [Shewanella
denitrificans OS217]
Length = 366
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
++ VA G+S DV A R + +PK GA+LW D+ AIPA
Sbjct: 233 NICVAYGFSGDVFQAAARADEAKNGHKIGYAIPKEGANLWFDMLAIPA 280
>gi|119483298|ref|ZP_01618712.1| extracellular solute-binding protein, family 1 [Lyngbya sp. PCC
8106]
gi|119458065|gb|EAW39187.1| extracellular solute-binding protein, family 1 [Lyngbya sp. PCC
8106]
Length = 367
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 34 IRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-S 92
+ D+ +A+ +S+D + ++ + PKSG+SLW D IP ++ A QW +
Sbjct: 239 VGDLLMAMCYSADAAEIMPENEDLRYITPKSGSSLWTDTLVIPKSAPNPDG---AYQWMN 295
Query: 93 ISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILA 152
+ P + ++ E + +PS L KLP+ L+ P+L PP ++
Sbjct: 296 FMLQPEIAAQVV----ERLSFATPSQL--AFRKLPKS-LRDDPTL-------FPPESVIE 341
Query: 153 RCEFLEPLS 161
R E L P+S
Sbjct: 342 RSESLAPIS 350
>gi|17232535|ref|NP_489083.1| polyamine-binding protein of polyamine ABC transporter [Nostoc sp.
PCC 7120]
gi|17134181|dbj|BAB76742.1| polyamine-binding protein of polyamine ABC transporter [Nostoc sp.
PCC 7120]
Length = 360
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 16/125 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D+ +A+ +S+D +K + V+P+SG+SLW D IP ++ ++
Sbjct: 235 DLALAMCYSADATKVIKENPKLKYVIPRSGSSLWTDTIVIPKSAP-------------NL 281
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
D + I + EV TS +T E L + +L PP+ IL +CE
Sbjct: 282 DGAYAWINFILQPEVAATTSERLKISTPNNAAFEQLPKQIKTNENL---YPPSSILDKCE 338
Query: 156 FLEPL 160
+ P+
Sbjct: 339 RISPV 343
>gi|386814709|ref|ZP_10101927.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
gi|386419285|gb|EIJ33120.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
Length = 344
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
E F DV + + WS +V+ A + ++ + PK GA W D +AIPA +
Sbjct: 212 EPFLAGDVNLGMIWSGEVVMAQEENPDIQYIFPKEGAGFWVDSFAIPAGAE 262
>gi|375335501|ref|ZP_09776845.1| extracellular solute-binding protein [Succinivibrionaceae bacterium
WG-1]
Length = 367
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ +++GWS D+L A R ++ VVPK GA ++ D+ AIPA
Sbjct: 234 DICLSIGWSGDMLQAASRAEEANNGVHLDYVVPKEGALIFFDMLAIPA 281
>gi|75908519|ref|YP_322815.1| extracellular solute-binding protein [Anabaena variabilis ATCC
29413]
gi|75702244|gb|ABA21920.1| extracellular solute-binding protein, family 1 [Anabaena variabilis
ATCC 29413]
Length = 360
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 16/125 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D+ +A+ +S+D +K + V+P+SG+SLW D IP ++ ++
Sbjct: 235 DLALAMCYSADATKVIKENPKLKYVIPRSGSSLWTDTIVIPKSAP-------------NL 281
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
D + I + EV TS +T E L + +L PP+ IL +CE
Sbjct: 282 DGAYAWINFILQPEVAATTSERLKISTPNNAAFEQLPKQIKTNENL---YPPSSILDKCE 338
Query: 156 FLEPL 160
+ P+
Sbjct: 339 RISPV 343
>gi|423694163|ref|ZP_17668683.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens SS101]
gi|388000415|gb|EIK61744.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens SS101]
Length = 364
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
++ VA G+S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 231 NICVAAGFSGDVFQAKARAAEAGKGVNIAYTIPKEGGNLWFDVLAIP 277
>gi|387896228|ref|YP_006326525.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas fluorescens A506]
gi|387164086|gb|AFJ59285.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens A506]
Length = 364
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
++ VA G+S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 231 NICVAAGFSGDVFQAKARAAEAGKGVNIAYTIPKEGGNLWFDVLAIP 277
>gi|374331995|ref|YP_005082179.1| putrescine-binding periplasmic protein [Pseudovibrio sp. FO-BEG1]
gi|359344783|gb|AEV38157.1| Putrescine-binding periplasmic protein [Pseudovibrio sp. FO-BEG1]
Length = 368
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
A D+ +A+GWS DV A R + V ++PK GA +W D AIP
Sbjct: 229 NALANGDICLAIGWSGDVFQARDRAAEADNGVTVNYIIPKEGALMWFDQMAIP 281
>gi|114705308|ref|ZP_01438216.1| putrescine-binding periplasmic protein [Fulvimarina pelagi
HTCC2506]
gi|114540093|gb|EAU43213.1| putrescine-binding periplasmic protein [Fulvimarina pelagi
HTCC2506]
Length = 365
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
D+ +A GWS D+L + R + V+PK GA +W D AIPA
Sbjct: 232 DICMAHGWSGDILQSRDRAKEAGQGVEIQYVIPKEGAVIWVDNMAIPA 279
>gi|347532015|ref|YP_004838778.1| ornithine carbamoyltransferase [Roseburia hominis A2-183]
gi|345502163|gb|AEN96846.1| ornithine carbamoyltransferase [Roseburia hominis A2-183]
Length = 357
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTN 85
+A+ +S + A++ ++++ VPK G++LW D W IPA S HK N
Sbjct: 234 LALVYSGEAATAMESNADLSYTVPKEGSNLWIDSWFIPADST-HKEN 279
>gi|83592354|ref|YP_426106.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC
11170]
gi|386349068|ref|YP_006047316.1| extracellular solute-binding protein [Rhodospirillum rubrum F11]
gi|83575268|gb|ABC21819.1| extracellular solute-binding protein, family 1 [Rhodospirillum
rubrum ATCC 11170]
gi|346717504|gb|AEO47519.1| extracellular solute-binding protein [Rhodospirillum rubrum F11]
Length = 369
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 14/79 (17%)
Query: 13 ESSTKFWYGV---VKLYTLSE---AFGIRDVWVAVGWSSDVLPA-----VKRMSN---VA 58
E +T W GV ++ + SE A D+ VA G+S D+ A K +N +
Sbjct: 205 EKATALWMGVRPYIQKFHSSEFINALANGDICVAFGYSGDIFQAQAQARAKEAANGVKID 264
Query: 59 VVVPKSGASLWADLWAIPA 77
++PK G +W DL A+PA
Sbjct: 265 YIIPKEGTLIWFDLMAVPA 283
>gi|398844291|ref|ZP_10601379.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
gi|398254710|gb|EJN39779.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
Length = 359
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ V VG+S DVL A R V +PK GA +W D+ A+PA +
Sbjct: 218 YTGDLANG--DICVVVGFSGDVLQAKNRADEAKNGVKVGYAIPKEGAPMWFDMVAMPADA 275
Query: 80 RLHKTNW 86
K +
Sbjct: 276 PDEKAGY 282
>gi|254469276|ref|ZP_05082681.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudovibrio sp. JE062]
gi|211961111|gb|EEA96306.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudovibrio sp. JE062]
Length = 368
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
A D+ +A+GWS DV A R + V ++PK GA +W D AIP
Sbjct: 229 NALANGDICLAIGWSGDVFQARDRAAEADNGVTVNYIIPKEGALMWFDQMAIP 281
>gi|423218963|ref|ZP_17205459.1| hypothetical protein HMPREF1061_02232 [Bacteroides caccae
CL03T12C61]
gi|392626580|gb|EIY20626.1| hypothetical protein HMPREF1061_02232 [Bacteroides caccae
CL03T12C61]
Length = 370
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ + V V VP G+++W D W IP ++ N +A+ + I
Sbjct: 180 WLNMTWSGDAIWAIEEANAVGVDLDYEVPDEGSNIWYDGWVIPKYAK----NPQAASYFI 235
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTL---VKLPEELLKGKPSLGTDLIAG 144
+ P + + F V +P LE TTL L G S+ D I
Sbjct: 236 NFMCRPDIALRNMDFCGYVSSIATPEILEEKVDTTLDYYADLSYFFGPGADSIQIDKIQ- 294
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 295 YPDRKVVERCAMIRDFGDKTKEVL 318
>gi|389876148|ref|YP_006369713.1| PotF [Tistrella mobilis KA081020-065]
gi|388526932|gb|AFK52129.1| PotF [Tistrella mobilis KA081020-065]
Length = 379
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPA 77
+V VA+G+S D+L A R + + V+P GA LW D+ AIPA
Sbjct: 244 EVCVAMGYSGDILQARDRAQEADNGNEIVYVIPSEGAQLWFDMLAIPA 291
>gi|170719470|ref|YP_001747158.1| extracellular solute-binding protein [Pseudomonas putida W619]
gi|169757473|gb|ACA70789.1| extracellular solute-binding protein family 1 [Pseudomonas putida
W619]
Length = 401
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA G+S DV A R N+A +PK G +LW D+ A+P ++
Sbjct: 268 DICVAAGFSGDVFQAKARAEEAEKGVNLAYAIPKEGGNLWFDVLAVPKDAK 318
>gi|419957687|ref|ZP_14473753.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter cloacae subsp. cloacae
GS1]
gi|388607845|gb|EIM37049.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter cloacae subsp. cloacae
GS1]
Length = 372
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++ + ++
Sbjct: 239 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKEEAYQFL 298
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAE 149
+ + D ++ V A E L E ++ P++ PPA+
Sbjct: 299 NYLMRPD-----VIAHISDHVYYANGNKASEP----LVSEEIRNNPAI-------YPPAD 342
Query: 150 ILARCEFLEPLSEATFDVLR 169
+ A+ F + E D +R
Sbjct: 343 VFAKL-FTLKVQEPKIDRVR 361
>gi|229593214|ref|YP_002875333.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas fluorescens SBW25]
gi|229365080|emb|CAY53278.1| putrescine ABC transport system, substrate-binding periplasmic
protein precursor [Pseudomonas fluorescens SBW25]
Length = 364
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
++ VA G+S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 231 NICVAAGFSGDVFQAKARAAEAGKGVNIAYAIPKEGGNLWFDVLAIP 277
>gi|119719819|ref|YP_920314.1| extracellular solute-binding protein [Thermofilum pendens Hrk 5]
gi|119524939|gb|ABL78311.1| extracellular solute-binding protein, family 1 [Thermofilum pendens
Hrk 5]
Length = 360
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
D+ A WS DV+ A +V V+PK GA +W D IP +R
Sbjct: 234 DLHAAHAWSGDVVQAQSENKSVEYVLPKEGAFVWIDFMVIPVNAR 278
>gi|119775774|ref|YP_928514.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Shewanella amazonensis SB2B]
gi|119768274|gb|ABM00845.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella amazonensis SB2B]
Length = 366
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIP 76
++ A+GWS DVL A R V +PK GA LW D+ AIP
Sbjct: 233 EICAAIGWSGDVLQAQARAEEAGNGQQVDYRIPKEGAPLWFDMMAIP 279
>gi|387886760|ref|YP_006317059.1| putrescine ABC transporter periplasmic protein [Francisella
noatunensis subsp. orientalis str. Toba 04]
gi|386871576|gb|AFJ43583.1| ATP-binding cassette putrescine uptake system, periplasmic protein
[Francisella noatunensis subsp. orientalis str. Toba 04]
Length = 393
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 32 FGIRDVWVAVGWSSDVLPAVKRMSNV------AVVVPKSGASLWADLWAIPAASR 80
F ++ + +G+S DV+ +VKR V A V+PK G ++W D+ IP ++
Sbjct: 247 FTAGNLCLVMGYSGDVVRSVKRAKTVNPYVTLAYVIPKEGTNIWFDMLMIPKGAK 301
>gi|374703154|ref|ZP_09710024.1| extracellular solute-binding protein [Pseudomonas sp. S9]
Length = 364
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
++ VA+GWS DV A R V+ V+PK GA+ + D+ AIPA ++
Sbjct: 231 NICVALGWSGDVFQAEARAEEAKNGVPVSYVIPKEGAAAFFDMMAIPADAK 281
>gi|330812452|ref|YP_004356914.1| putrescine ABC transporter periplasmic protein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|423699956|ref|ZP_17674446.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens Q8r1-96]
gi|327380560|gb|AEA71910.1| Putrescine ABC transporter, periplasmic component [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|387996769|gb|EIK58099.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens Q8r1-96]
Length = 365
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 76
++ VA G+S D+ A R S +A V+PK G +LW D+ AIP
Sbjct: 232 EICVAAGFSGDIFQARARASEAGKGVEIAYVIPKEGGNLWFDMLAIP 278
>gi|398854469|ref|ZP_10611030.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398235735|gb|EJN21545.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 361
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R ++ +PK GA++W D+ A+P +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAKEAKNGVDIGYNIPKEGAAIWFDMVAMPVDA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|388468131|ref|ZP_10142341.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas synxantha BG33R]
gi|388011711|gb|EIK72898.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas synxantha BG33R]
Length = 364
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
++ VA G+S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 231 NICVAAGFSGDVFQAKARAAEAGKGVNIAYAIPKEGGNLWFDVLAIP 277
>gi|381157623|ref|ZP_09866857.1| spermidine/putrescine-binding periplasmic protein [Thiorhodovibrio
sp. 970]
gi|380881486|gb|EIC23576.1| spermidine/putrescine-binding periplasmic protein [Thiorhodovibrio
sp. 970]
Length = 377
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 22/128 (17%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
+ W+ W+ D L ++R + +VPK G L D IPA +R
Sbjct: 252 ETWIGQTWNGDALMLMERNPAIRYIVPKEGGELMIDYLVIPAEAR--------------- 296
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAG---VPPAEILA 152
+P + + + E P + + ++ ++ L K L D + PP E+ A
Sbjct: 297 EPELANAFINWLHE--PANAAACAQS--LQFATTNLAAKALLPQDFLNNPVIYPPPEVFA 352
Query: 153 RCEFLEPL 160
R E +PL
Sbjct: 353 RSEVQQPL 360
>gi|423093076|ref|ZP_17080872.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens Q2-87]
gi|397882270|gb|EJK98757.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens Q2-87]
Length = 365
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 76
++ VA G+S D+ A R S +A V+PK G +LW D+ AIP
Sbjct: 232 EICVAAGFSGDIFQARARASEAGKGVEIAYVIPKEGGNLWFDMLAIP 278
>gi|154252003|ref|YP_001412827.1| extracellular solute-binding protein [Parvibaculum lavamentivorans
DS-1]
gi|154155953|gb|ABS63170.1| extracellular solute-binding protein family 1 [Parvibaculum
lavamentivorans DS-1]
Length = 363
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
+V V + +S D+ + ++ VVPK G +W D+ AIP AS H N A I
Sbjct: 237 EVDVTMEYSGDIAQLMSEDDDIGYVVPKEGGIIWEDVLAIP-ASAPHPENAHAFINYIH- 294
Query: 96 DPSMDRILLPFKQEVIPGTS-----PSALETTLVKLPEE 129
P ++++ + Q P + P +T+ V P E
Sbjct: 295 SPEPNQLITDYIQFATPNKAGFDLMPEEYQTSEVTFPPE 333
>gi|90021014|ref|YP_526841.1| transcription factor jumonji, jmjC [Saccharophagus degradans 2-40]
gi|89950614|gb|ABD80629.1| extracellular solute-binding protein, family 1 [Saccharophagus
degradans 2-40]
Length = 365
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
D+ VA G+S DVL A R NVA VP+ GA +W+D+ IP
Sbjct: 232 DLCVAHGYSGDVLQARARAEEAEKGVNVAYTVPQEGAVVWSDVMVIP 278
>gi|84500631|ref|ZP_00998880.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Oceanicola batsensis HTCC2597]
gi|84391584|gb|EAQ03916.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Oceanicola batsensis HTCC2597]
Length = 351
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 31 AFGIRDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 76
A D+ +A+GWS DVL A R + V VPK GA +W D AIP
Sbjct: 213 ALANGDICLALGWSGDVLQARDRAAEADNGVEVTYEVPKEGALMWFDQMAIP 264
>gi|429332185|ref|ZP_19212915.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
gi|428763016|gb|EKX85201.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
Length = 359
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G DV V VG+S DVL A R V +PK GA +W D+ A+PA +
Sbjct: 218 YTGDLANG--DVCVVVGFSGDVLQAKNRAEEAKNGVKVGYSIPKEGAPMWFDMVAMPADA 275
Query: 80 RLHKTNW 86
K +
Sbjct: 276 PDEKAGY 282
>gi|21231781|ref|NP_637698.1| periplasmic putrescine-binding protein; permease [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66768093|ref|YP_242855.1| periplasmic putrescine-binding protein; permease [Xanthomonas
campestris pv. campestris str. 8004]
gi|384428252|ref|YP_005637611.1| periplasmic putrescine-binding protein; permease [Xanthomonas
campestris pv. raphani 756C]
gi|21113490|gb|AAM41622.1| periplasmic putrescine-binding protein; permease protein
[Xanthomonas campestris pv. campestris str. ATCC 33913]
gi|66573425|gb|AAY48835.1| periplasmic putrescine-binding protein; permease protein
[Xanthomonas campestris pv. campestris str. 8004]
gi|341937354|gb|AEL07493.1| periplasmic putrescine-binding protein; permease protein
[Xanthomonas campestris pv. raphani 756C]
Length = 371
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
Y S A G + +AVGWS D++ A R + VA +PK GA W D+ AIP +
Sbjct: 230 YVTSLANG--NTCLAVGWSGDIIQARDRAAEAGNTVKVAYSIPKEGAPQWFDMLAIPKDA 287
Query: 80 RLHKTNWRA 88
+ H N A
Sbjct: 288 K-HPENAYA 295
>gi|188991224|ref|YP_001903234.1| ABC transporter putrescine-binding protein [Xanthomonas campestris
pv. campestris str. B100]
gi|167732984|emb|CAP51180.1| ABC transporter putrescine-binding protein [Xanthomonas campestris
pv. campestris]
Length = 371
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
Y S A G + +AVGWS D++ A R + VA +PK GA W D+ AIP +
Sbjct: 230 YVTSLANG--NTCLAVGWSGDIIQARDRAAEAGNTVKVAYSIPKEGAPQWFDMLAIPKDA 287
Query: 80 RLHKTNWRA 88
+ H N A
Sbjct: 288 K-HPENAYA 295
>gi|380511547|ref|ZP_09854954.1| putrescine ABC transporter substrate-binding protein [Xanthomonas
sacchari NCPPB 4393]
Length = 373
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 39 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRA 88
+AVGWS D++ A R +VA +PK GA W D+ AIP ++ H N A
Sbjct: 243 LAVGWSGDIIQARDRAEEAKNGVHVAYSIPKEGAPQWFDMLAIPKDAK-HPDNAYA 297
>gi|170743030|ref|YP_001771685.1| extracellular solute-binding protein [Methylobacterium sp. 4-46]
gi|168197304|gb|ACA19251.1| extracellular solute-binding protein family 1 [Methylobacterium sp.
4-46]
Length = 365
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
DV ++VG+S DVL A +R ++A +P+ GA +W D +AIP
Sbjct: 232 DVCLSVGYSGDVLQARRRAQEAKNDVDIAYYIPQQGALMWFDSFAIP 278
>gi|83855357|ref|ZP_00948887.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sulfitobacter sp. NAS-14.1]
gi|83843200|gb|EAP82367.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sulfitobacter sp. NAS-14.1]
Length = 361
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 31 AFGIRDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
A D+ VA GWS D+L + R + +A PK GA +W D AIPA
Sbjct: 223 ALANGDICVAFGWSGDILQSRDRAAEADNGVEIAYYAPKEGALMWFDNMAIPA 275
>gi|254460332|ref|ZP_05073748.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Rhodobacterales bacterium HTCC2083]
gi|206676921|gb|EDZ41408.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Rhodobacteraceae bacterium HTCC2083]
Length = 360
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
A D+ VA+GWS D+L A R + +A K GA +W D AIPA
Sbjct: 221 NALANGDICVAIGWSGDILQARDRAAEAENGVEIAYHAAKEGAQMWFDQMAIPA 274
>gi|104780265|ref|YP_606763.1| periplasmic polyamine-binding protein [Pseudomonas entomophila L48]
gi|95109252|emb|CAK13949.1| putative periplasmic polyamine-binding protein [Pseudomonas
entomophila L48]
Length = 359
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G DV V VG+S DVL A R V +PK GA +W D+ A+PA +
Sbjct: 218 YTGDLANG--DVCVVVGFSGDVLQAKNRAEEAKNGVKVGYSIPKEGAPMWFDMVAMPADA 275
Query: 80 RLHKTNW 86
K +
Sbjct: 276 PDEKAGY 282
>gi|87120793|ref|ZP_01076686.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinomonas sp. MED121]
gi|86164021|gb|EAQ65293.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinomonas sp. MED121]
Length = 372
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRM----SNVAVV--VPKSGASLWADLWAIPAASR 80
D VAVG+S DV A R + V VV +PK G+ +W D+ AIPA ++
Sbjct: 239 DTCVAVGFSGDVFQAAARAEEADNGVEVVYSIPKEGSEIWFDMLAIPADAK 289
>gi|83951001|ref|ZP_00959734.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Roseovarius nubinhibens ISM]
gi|83838900|gb|EAP78196.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Roseovarius nubinhibens ISM]
Length = 373
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIP 76
D+ VA GWS D+L A R + +A PK GA +W D AIP
Sbjct: 240 DICVAFGWSGDMLQARDRAAEADNGNEIAYFAPKEGALMWFDQMAIP 286
>gi|440739397|ref|ZP_20918911.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas fluorescens BRIP34879]
gi|447918914|ref|YP_007399482.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas poae RE*1-1-14]
gi|440379593|gb|ELQ16183.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas fluorescens BRIP34879]
gi|445202777|gb|AGE27986.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas poae RE*1-1-14]
Length = 364
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
++ VA G+S DV A R + N+A +PK G +LW D+ AIP
Sbjct: 231 NICVAAGFSGDVFQAKARAAEAGKGVNIAYAIPKEGGNLWFDVLAIP 277
>gi|398899196|ref|ZP_10648857.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
gi|398182993|gb|EJM70490.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
Length = 361
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D++ A R ++ +P+ GA++W D+ A+PA +
Sbjct: 220 YTSDLANG--DICVAVGFSGDIIQAENRAKEARNGVDIGYSIPREGAAIWFDMVAMPADA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|188583690|ref|YP_001927135.1| family 1 extracellular solute-binding protein [Methylobacterium
populi BJ001]
gi|179347188|gb|ACB82600.1| extracellular solute-binding protein family 1 [Methylobacterium
populi BJ001]
Length = 367
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 76
DV +AVG+S DV+ A KR +A +PK G +W D +AIP
Sbjct: 234 DVCLAVGYSGDVMQAKKRAEESKNGVEIAYFIPKEGTLMWFDTFAIP 280
>gi|422356129|ref|ZP_16436821.1| bacterial extracellular solute-binding protein [Escherichia coli MS
117-3]
gi|422763989|ref|ZP_16817742.1| extracellular solute-binding protein [Escherichia coli E1167]
gi|422775327|ref|ZP_16828983.1| bacterial extracellular solute-binding protein [Escherichia coli
H120]
gi|323947122|gb|EGB43133.1| bacterial extracellular solute-binding protein [Escherichia coli
H120]
gi|324015948|gb|EGB85167.1| bacterial extracellular solute-binding protein [Escherichia coli MS
117-3]
gi|324116167|gb|EGC10090.1| extracellular solute-binding protein [Escherichia coli E1167]
Length = 395
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ ++PK GA + D++A+PA ++
Sbjct: 262 DICVAIGWAGDVWQASNRAKEAKNGVNVSFLIPKEGAMAFFDVFAMPADAK 312
>gi|83941880|ref|ZP_00954342.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sulfitobacter sp. EE-36]
gi|83847700|gb|EAP85575.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sulfitobacter sp. EE-36]
Length = 361
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 31 AFGIRDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
A D+ VA GWS D+L + R + +A PK GA +W D AIPA
Sbjct: 223 ALANGDICVAFGWSGDILQSRDRAAEADNGVEIAYYAPKEGALMWFDNMAIPA 275
>gi|398945502|ref|ZP_10671786.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398156802|gb|EJM45215.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 361
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S D+L A R ++ +PK GA++W D+ A+P +
Sbjct: 220 YTSDLANG--DICVAVGFSGDILQAENRAKEAKNGVDIGYEIPKEGAAIWFDMVAMPVDA 277
Query: 80 RLHKTNW 86
K +
Sbjct: 278 PDEKAGY 284
>gi|388546311|ref|ZP_10149587.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
sp. M47T1]
gi|388275548|gb|EIK95134.1| polyamine ABC transporter substrate-binding protein [Pseudomonas
sp. M47T1]
Length = 363
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPA 77
YT A G DV V VG++ DVL A + N+ VP+ GA LW D+ A+PA
Sbjct: 220 YTNDLANG--DVCVVVGYNGDVLQAQTTATAANKGVNIGYSVPREGAPLWFDMVAMPA 275
>gi|189463172|ref|ZP_03011957.1| hypothetical protein BACCOP_03883 [Bacteroides coprocola DSM 17136]
gi|189430151|gb|EDU99135.1| ABC transporter, solute-binding protein [Bacteroides coprocola DSM
17136]
Length = 441
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D A++ V V +P+ G+++W D W IP ++ N +A+ + I
Sbjct: 252 WINMTWSGDAQWAIEEAEQVGVDLSYSIPEEGSNIWYDGWVIPKYAK----NVKAASYFI 307
Query: 94 SIDPSMDRILLPFKQE------VIPGTSPSALETTLVKLPEELLKGKPSLGTDL---IAG 144
+ D L ++ P + ++TTL + + P G D+
Sbjct: 308 NFLCRPDIALRNMEENGYVSAIAAPEIMEACIDTTLTETVDASYFFGPE-GRDVKLRNTQ 366
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P ++ RC + + T +VL
Sbjct: 367 YPDISVVNRCSMIRDFGDKTVNVL 390
>gi|339492154|ref|YP_004712447.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338799526|gb|AEJ03358.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 361
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
++ VA G+S DV A R +A +PK G +LW D+ AIPA
Sbjct: 228 NICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDMLAIPA 275
>gi|315502015|ref|YP_004080902.1| family 1 extracellular solute-binding protein [Micromonospora sp.
L5]
gi|315408634|gb|ADU06751.1| extracellular solute-binding protein family 1 [Micromonospora sp.
L5]
Length = 394
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 13/128 (10%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D+ +GWS DV+ + VVP+SG LW+D +P + HK N A +
Sbjct: 265 DIAACIGWSGDVVQLGFEDDKIKFVVPESGVMLWSDNMLVPNKA-THKANAEA-LMNHYY 322
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
DP++ L + + P A E+ K P L T+ + P +L++ +
Sbjct: 323 DPAVAAKLAAYVNYICPVQGAQA----------EMEKIDPDLATNPLI-FPDDTMLSKAK 371
Query: 156 FLEPLSEA 163
L EA
Sbjct: 372 VFMALDEA 379
>gi|146280465|ref|YP_001170618.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|386018710|ref|YP_005936734.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
gi|145568670|gb|ABP77776.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|327478682|gb|AEA81992.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
Length = 361
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
++ VA G+S DV A R +A +PK G +LW D+ AIPA
Sbjct: 228 NICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDMLAIPA 275
>gi|170722071|ref|YP_001749759.1| extracellular solute-binding protein [Pseudomonas putida W619]
gi|169760074|gb|ACA73390.1| extracellular solute-binding protein family 1 [Pseudomonas putida
W619]
Length = 362
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
D+ +A G+S DV A R +A +PK G++LW DL AIP
Sbjct: 229 DICIAFGYSGDVFQAANRSVEAKNGVKIAYSIPKEGSNLWFDLLAIP 275
>gi|452995741|emb|CCQ92565.1| putative Bacterial extracellular solute-binding protein
[Clostridium ultunense Esp]
Length = 348
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+AV WS D + ++ N+ V+PK G +LW D IP +
Sbjct: 225 LAVVWSGDAVAMIRENENLEYVIPKEGTNLWFDNMVIPKGGK 266
>gi|390951419|ref|YP_006415178.1| spermidine/putrescine-binding periplasmic protein [Thiocystis
violascens DSM 198]
gi|390427988|gb|AFL75053.1| spermidine/putrescine-binding periplasmic protein [Thiocystis
violascens DSM 198]
Length = 367
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 22/124 (17%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA G+S DVL A +R ++ +P+ GA+LW D+ AIP + N A+
Sbjct: 234 DLCVAHGYSGDVLQAQERAEEAGKGVDLEYRIPREGAALWTDVMAIPKDA----PNPAAA 289
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAE 149
I+ +D ++ + + +P+ T L+ + L+G P + PPAE
Sbjct: 290 HAFIAY--LLDPKVIAAASDYVYYANPNLAATPLI---DSDLRGNPGI-------YPPAE 337
Query: 150 ILAR 153
+ R
Sbjct: 338 VKQR 341
>gi|302865467|ref|YP_003834104.1| family 1 extracellular solute-binding protein [Micromonospora
aurantiaca ATCC 27029]
gi|302568326|gb|ADL44528.1| extracellular solute-binding protein family 1 [Micromonospora
aurantiaca ATCC 27029]
Length = 394
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 13/128 (10%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D+ +GWS DV+ + VVP+SG LW+D +P + HK N A +
Sbjct: 265 DIAACIGWSGDVVQLGFEDDKIKFVVPESGVMLWSDNMLVPNKA-THKANAEA-LMNHYY 322
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
DP++ L + + P A E+ K P L T+ + P +L++ +
Sbjct: 323 DPAVAAKLAAYVNYICPVQGAQA----------EMEKIDPDLATNPLI-FPDDTMLSKAK 371
Query: 156 FLEPLSEA 163
L EA
Sbjct: 372 VFMALDEA 379
>gi|310659049|ref|YP_003936770.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [[Clostridium] sticklandii]
gi|308825827|emb|CBH21865.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [[Clostridium] sticklandii]
Length = 345
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISIDPS 98
+++ WS D + + ++A +PK G +LW D AIP + HK + I I+
Sbjct: 223 MSLAWSGDAMLLMSENEDLAYAIPKEGTNLWFDCMAIPTTAA-HK-----EEAEIFINFM 276
Query: 99 MDRILLPFKQEVIPGTSPSALETTLVKLPEE 129
M + E I ++P+ E L LPEE
Sbjct: 277 MRPDIAARNSEYIKYSTPN--EAALELLPEE 305
>gi|254467215|ref|ZP_05080626.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Rhodobacterales bacterium Y4I]
gi|206688123|gb|EDZ48605.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Rhodobacterales bacterium Y4I]
Length = 387
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Query: 31 AFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
A D+ VA GWS D+L A R +A PK GA +W D AIP
Sbjct: 249 ALANGDICVAFGWSGDILQARDRADEADNGVEIAFNAPKEGALMWFDQMAIP 300
>gi|254437749|ref|ZP_05051243.1| Bacterial extracellular solute-binding protein, putative
[Octadecabacter antarcticus 307]
gi|198253195|gb|EDY77509.1| Bacterial extracellular solute-binding protein, putative
[Octadecabacter antarcticus 307]
Length = 385
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D W+ + W+ D + + ++ K G LW+D +AIP + T + + +
Sbjct: 260 DAWMTICWTGDGKQLNTDIPEIEYILGKEGGELWSDYYAIPKGAP--HTEAAYALINFML 317
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
DP ++ +EV+ P A T LP+ +L P L P AE+L E
Sbjct: 318 DPEVN------AREVLAHGYPVADNRTNALLPDAILN-DPIL-------YPAAELLNALE 363
Query: 156 F 156
F
Sbjct: 364 F 364
>gi|269127601|ref|YP_003300971.1| family 1 extracellular solute-binding protein [Thermomonospora
curvata DSM 43183]
gi|268312559|gb|ACY98933.1| extracellular solute-binding protein family 1 [Thermomonospora
curvata DSM 43183]
Length = 416
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 22 VVKLYT--LSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
V K Y ++A DVW+ + WS DV + +V VVP+ G +LW D IP +
Sbjct: 261 VRKYYNQDYADAIAKGDVWITMAWSGDVYSL--GLEDVKFVVPEEGGTLWTDNMCIPKTA 318
>gi|409396642|ref|ZP_11247622.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
gi|409118824|gb|EKM95215.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
Length = 361
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
++ VA G+S DV A R +A +PK G +LW D+ AIPA
Sbjct: 228 NICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDMLAIPA 275
>gi|425080696|ref|ZP_18483793.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|428936123|ref|ZP_19009554.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae JHCK1]
gi|405605831|gb|EKB78835.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|426298988|gb|EKV61354.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae JHCK1]
Length = 370
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 22/124 (17%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++ ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFL 296
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAE 149
+ + D ++ +V A T LV E ++ P++ PPA+
Sbjct: 297 NYLMRPD-----VIAKISDQVFYANGNKA-STPLV---SETIRNNPAI-------YPPAD 340
Query: 150 ILAR 153
+ A+
Sbjct: 341 VFAK 344
>gi|365139255|ref|ZP_09345724.1| putrescine-binding periplasmic protein [Klebsiella sp. 4_1_44FAA]
gi|363654420|gb|EHL93323.1| putrescine-binding periplasmic protein [Klebsiella sp. 4_1_44FAA]
Length = 370
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 22/124 (17%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++ ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFL 296
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAE 149
+ + D ++ +V A T LV E ++ P++ PPA+
Sbjct: 297 NYLMRPD-----VIAKISDQVFYANGNKA-STPLV---SETIRNNPAI-------YPPAD 340
Query: 150 ILAR 153
+ A+
Sbjct: 341 VFAK 344
>gi|238893913|ref|YP_002918647.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|238546229|dbj|BAH62580.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
Length = 376
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 22/124 (17%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++ ++
Sbjct: 243 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFL 302
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAE 149
+ + D ++ +V A T LV E ++ P++ PPA+
Sbjct: 303 NYLMRPD-----VIAKISDQVFYANGNKA-STPLV---SETIRNNPAI-------YPPAD 346
Query: 150 ILAR 153
+ A+
Sbjct: 347 VFAK 350
>gi|386034068|ref|YP_005953981.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae KCTC 2242]
gi|424829863|ref|ZP_18254591.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|339761196|gb|AEJ97416.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae KCTC 2242]
gi|414707288|emb|CCN28992.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae subsp. pneumoniae Ecl8]
Length = 370
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 22/124 (17%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++ ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFL 296
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAE 149
+ + D ++ +V A T LV E ++ P++ PPA+
Sbjct: 297 NYLMRPD-----VIAKISDQVFYANGNKA-STPLV---SETIRNNPAI-------YPPAD 340
Query: 150 ILAR 153
+ A+
Sbjct: 341 VFAK 344
>gi|34497412|ref|NP_901627.1| polyamine ABC transporter system, substrate-binding protein
[Chromobacterium violaceum ATCC 12472]
gi|34103267|gb|AAQ59629.1| polyamine ABC transporter system, substrate-binding protein
[Chromobacterium violaceum ATCC 12472]
Length = 366
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIP 76
D+ +A+GWS DV A KR + V+PKSGA +W D+ IP
Sbjct: 233 DICLALGWSGDVNIAKHRAAEAKRSYQLGYVIPKSGAPIWFDVMVIP 279
>gi|113476392|ref|YP_722453.1| extracellular solute-binding protein [Trichodesmium erythraeum
IMS101]
gi|110167440|gb|ABG51980.1| extracellular solute-binding protein, family 1 [Trichodesmium
erythraeum IMS101]
Length = 353
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 18/130 (13%)
Query: 34 IRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-S 92
+ D+ +A+ +SSD ++ + P+SG+SLW D IP + + A QW +
Sbjct: 226 VEDLLIAMCYSSDAAEIKPENEDLEYITPRSGSSLWTDTLVIPKNAPNPEG---AYQWIN 282
Query: 93 ISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILA 152
+ P + ++ E + T+ S + LPEE LK +L PP +L
Sbjct: 283 FMLQPDVAAQIV----ERLSFTTASRKAYQI--LPEE-LKEDSTL-------FPPESVLE 328
Query: 153 RCEFLEPLSE 162
+CE L PL +
Sbjct: 329 KCESLAPLGK 338
>gi|398935610|ref|ZP_10666568.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398169562|gb|EJM57544.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 386
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D W+A+ W+ D + + + + K G LW+D +AIP +S HK A + +
Sbjct: 261 DAWLAMSWTGDASQLHRDNAQMQFELGKEGGELWSDFFAIPKSSE-HKDAAYAF-INYLL 318
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
DP +++ EV+ PS + LP +L D I P AE L+ E
Sbjct: 319 DPQHNKL------EVLSHGYPSGDKRVDALLPTAMLD-------DPIM-YPAAEALSPLE 364
Query: 156 F 156
F
Sbjct: 365 F 365
>gi|421615517|ref|ZP_16056541.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri KOS6]
gi|409782590|gb|EKN62145.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri KOS6]
Length = 361
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
++ VA G+S DV A R +A +PK G +LW D+ AIPA
Sbjct: 228 NICVAAGFSGDVFQAAARAEEAGKGVEIAYAIPKEGGNLWFDMLAIPA 275
>gi|198276979|ref|ZP_03209510.1| hypothetical protein BACPLE_03186 [Bacteroides plebeius DSM 17135]
gi|198270504|gb|EDY94774.1| ABC transporter, solute-binding protein [Bacteroides plebeius DSM
17135]
Length = 446
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 16/143 (11%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D A++ + V V +P+ G+++W D W IP ++ N +A+ + I
Sbjct: 256 WMNMTWSGDAQWAMEEAATVGVDLAYTIPEEGSNVWYDGWVIPKYAK----NPKAASYFI 311
Query: 94 SIDPSMDRILLPFKQE--VIPGTSPSALETTLVKLPEELLKGKPSLGTDLI------AGV 145
+ D L ++ V +P LE + ++ + G +
Sbjct: 312 NFLCRPDIALRNMEENGYVSAIAAPEILEACIDSTLDKEVDASYFFGPEAQKVKLRNTQY 371
Query: 146 PPAEILARCEFLEPLSEATFDVL 168
P ++ARC + + T DVL
Sbjct: 372 PDKSVIARCAMIRDFGDKTVDVL 394
>gi|399040652|ref|ZP_10735990.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF122]
gi|398061439|gb|EJL53235.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF122]
Length = 366
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D+ +A G+S D+ A R + + +P GA +W D+ AIPA ++
Sbjct: 233 DICIAFGYSGDIFQAANRATEAKNGVEIGYSIPSQGAQMWFDMMAIPADAK 283
>gi|409436131|ref|ZP_11263323.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Rhizobium mesoamericanum STM3625]
gi|408752041|emb|CCM74472.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Rhizobium mesoamericanum STM3625]
Length = 366
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D+ +A G+S D+ A R + + +P GA +W D+ AIPA ++
Sbjct: 233 DICIAFGYSGDIFQAANRATEAKNGVEIGYSIPSQGAQMWFDMMAIPADAK 283
>gi|170723466|ref|YP_001751154.1| extracellular solute-binding protein [Pseudomonas putida W619]
gi|169761469|gb|ACA74785.1| extracellular solute-binding protein family 1 [Pseudomonas putida
W619]
Length = 359
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ V VG+S DVL A R V +PK GA +W D+ A+PA +
Sbjct: 218 YTGDLANG--DICVVVGFSGDVLQAKNRADEAKNGVKVGYSIPKEGAPMWFDMVAMPADA 275
Query: 80 RLHKTNW 86
K +
Sbjct: 276 PDEKAGY 282
>gi|398895079|ref|ZP_10647011.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398181500|gb|EJM69062.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 380
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D W+A+ W+ D + + + + K G LW+D +AIP +S HK A + +
Sbjct: 255 DAWLAMSWTGDASQLHRDNAQMQFELGKEGGELWSDFFAIPKSSE-HKDAAYAF-INYLL 312
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
DP +++ EV+ PS + LP +L D I P AE L+ E
Sbjct: 313 DPQHNKL------EVLSHGYPSGDKRVDALLPTAMLD-------DPIM-YPAAEALSPLE 358
Query: 156 F 156
F
Sbjct: 359 F 359
>gi|374855306|dbj|BAL58166.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
Length = 352
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D+ VA GWS + A N+ V+P+ G +WAD AI +S+ + + + +
Sbjct: 227 DLVVAHGWSGEFAKAHVENPNIRYVIPREGGVIWADNLAILKSSQ--RIDLAHTFIDFLL 284
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
P+++ ++ F + P T+ +A T LPE + P++ PP EIL + E
Sbjct: 285 RPTINAKIVNFLR--YPSTNEAA---TAHILPE--IVNDPAI-------YPPEEILEKLE 330
Query: 156 FLEPLSEA 163
++ + +A
Sbjct: 331 WIRDVGDA 338
>gi|329927991|ref|ZP_08281995.1| putative spermidine/putrescine ABC transporter [Paenibacillus sp.
HGF5]
gi|328938095|gb|EGG34492.1| putative spermidine/putrescine ABC transporter [Paenibacillus sp.
HGF5]
Length = 350
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
W+A WS D +VA VVP+ GA++++D +AIP ++
Sbjct: 226 WIATVWSGDAAFIAAENPDVAYVVPEEGATIFSDNYAIPKGAK 268
>gi|152969442|ref|YP_001334551.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206577099|ref|YP_002239497.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae 342]
gi|288936345|ref|YP_003440404.1| family 1 extracellular solute-binding protein [Klebsiella variicola
At-22]
gi|290510599|ref|ZP_06549969.1| periplasmic-binding component [Klebsiella sp. 1_1_55]
gi|329999807|ref|ZP_08303535.1| putrescine-binding periplasmic protein [Klebsiella sp. MS 92-3]
gi|378977921|ref|YP_005226062.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|402781600|ref|YP_006637146.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|419762541|ref|ZP_14288788.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|419971965|ref|ZP_14487395.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419978771|ref|ZP_14494066.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419985544|ref|ZP_14500684.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419992759|ref|ZP_14507711.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419995076|ref|ZP_14509884.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420003546|ref|ZP_14518191.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420009197|ref|ZP_14523682.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016570|ref|ZP_14530860.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420021885|ref|ZP_14536060.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420025169|ref|ZP_14539179.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420032279|ref|ZP_14546095.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420039041|ref|ZP_14552681.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420043699|ref|ZP_14557185.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050082|ref|ZP_14563385.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056222|ref|ZP_14569381.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420061218|ref|ZP_14574209.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067945|ref|ZP_14580732.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420072702|ref|ZP_14585337.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420077640|ref|ZP_14590104.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420083426|ref|ZP_14595708.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421909288|ref|ZP_16339108.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421915899|ref|ZP_16345491.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424934273|ref|ZP_18352645.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|425077462|ref|ZP_18480565.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|425088095|ref|ZP_18491188.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|425090758|ref|ZP_18493843.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|428150839|ref|ZP_18998595.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428941619|ref|ZP_19014657.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae VA360]
gi|449057000|ref|ZP_21735513.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae hvKP1]
gi|150954291|gb|ABR76321.1| periplasmic putrescine-binding protein; permease protein
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|206566157|gb|ACI07933.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae 342]
gi|288891054|gb|ADC59372.1| extracellular solute-binding protein family 1 [Klebsiella variicola
At-22]
gi|289777315|gb|EFD85313.1| periplasmic-binding component [Klebsiella sp. 1_1_55]
gi|328538204|gb|EGF64354.1| putrescine-binding periplasmic protein [Klebsiella sp. MS 92-3]
gi|364517332|gb|AEW60460.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|397351214|gb|EJJ44299.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397351358|gb|EJJ44442.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397352903|gb|EJJ45981.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397360172|gb|EJJ52854.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397368849|gb|EJJ61454.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397369366|gb|EJJ61967.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397374739|gb|EJJ67059.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397381977|gb|EJJ74142.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397385957|gb|EJJ78044.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397397726|gb|EJJ89398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397398046|gb|EJJ89712.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397403619|gb|EJJ95176.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397412009|gb|EJK03253.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397413505|gb|EJK04718.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397420859|gb|EJK11906.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427266|gb|EJK18047.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397431278|gb|EJK21955.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397438769|gb|EJK29249.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397445829|gb|EJK36062.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397451255|gb|EJK41343.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|397744722|gb|EJK91933.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|402542476|gb|AFQ66625.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|405593171|gb|EKB66623.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|405602227|gb|EKB75369.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|405613736|gb|EKB86465.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|407808460|gb|EKF79711.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|410116845|emb|CCM81733.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410121811|emb|CCM88116.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426300139|gb|EKV62438.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae VA360]
gi|427539108|emb|CCM94733.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|448875441|gb|EMB10458.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae hvKP1]
Length = 370
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 22/124 (17%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++ ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFL 296
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAE 149
+ + D ++ +V A T LV E ++ P++ PPA+
Sbjct: 297 NYLMRPD-----VIAKISDQVFYANGNKA-STPLV---SETIRNNPAI-------YPPAD 340
Query: 150 ILAR 153
+ A+
Sbjct: 341 VFAK 344
>gi|315644532|ref|ZP_07897664.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
vortex V453]
gi|315280039|gb|EFU43336.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
vortex V453]
Length = 350
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
W+A WS D +VA VVP+ GA++++D +AIP ++
Sbjct: 226 WIATVWSGDAAFIAAENPDVAYVVPEEGATIFSDNYAIPKGAK 268
>gi|294665878|ref|ZP_06731145.1| periplasmic putrescine-binding protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292604333|gb|EFF47717.1| periplasmic putrescine-binding protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 371
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
Y S A G + +AVGWS D++ A R VA +PK GA W D+ AIP +
Sbjct: 230 YVTSLANG--NTCLAVGWSGDIIQARDRAVEAGNKIKVAYAIPKEGAPQWFDMLAIPKDA 287
Query: 80 RLHKTNWRA 88
+ H N A
Sbjct: 288 K-HPDNAYA 295
>gi|224540093|ref|ZP_03680632.1| hypothetical protein BACCELL_05006 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518286|gb|EEF87391.1| hypothetical protein BACCELL_05006 [Bacteroides cellulosilyticus
DSM 14838]
Length = 232
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASR 80
W+ + WS D + A+ V V VVP+ G+++W D WAIP +R
Sbjct: 41 WLNLTWSGDAVWAIDEAEAVGVDLDYVVPREGSNIWYDGWAIPKYAR 87
>gi|418518132|ref|ZP_13084284.1| periplasmic putrescine-binding protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410704827|gb|EKQ63307.1| periplasmic putrescine-binding protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 371
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
Y S A G + +AVGWS D++ A R VA +PK GA W D+ AIP +
Sbjct: 230 YVTSLANG--NTCLAVGWSGDIIQARDRAVEAGNNIKVAYAIPKEGAPQWFDMLAIPKDA 287
Query: 80 RLHKTNWRA 88
+ H N A
Sbjct: 288 K-HPDNAYA 295
>gi|283779715|ref|YP_003370470.1| family 1 extracellular solute-binding protein [Pirellula staleyi
DSM 6068]
gi|283438168|gb|ADB16610.1| extracellular solute-binding protein family 1 [Pirellula staleyi
DSM 6068]
Length = 367
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 21/141 (14%)
Query: 22 VVKLYTLSEAFGIR----DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPA 77
+V+ YT S+A+ + D WVAVGW+ D+ A ++ V+ G +W D IP+
Sbjct: 226 LVQAYT-SDAYKEKLIAGDAWVAVGWNGDLRQAADEEPHIQVINRAQGTMVWLDSMVIPS 284
Query: 78 ASRLHKTNWRASQWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSL 137
+ + +DP++ F P T+ AL LP+EL
Sbjct: 285 GAP--HAELAHELINFLLDPAIAARNAEFVHFGSPNTAARAL------LPDELKND---- 332
Query: 138 GTDLIAGVPPAEILARCEFLE 158
A PP +++A+ +L+
Sbjct: 333 ----TAIYPPDDVIAKSVYLK 349
>gi|419955797|ref|ZP_14471919.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
gi|387967393|gb|EIK51696.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
Length = 361
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
++ VA G+S DV A R +A +PK G +LW D+ AIPA
Sbjct: 228 NICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKEGGNLWFDMLAIPA 275
>gi|350552223|ref|ZP_08921428.1| extracellular solute-binding protein family 1 [Thiorhodospira
sibirica ATCC 700588]
gi|349794876|gb|EGZ48684.1| extracellular solute-binding protein family 1 [Thiorhodospira
sibirica ATCC 700588]
Length = 361
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA G+S DVL A R V ++P+ GA LW D+ AIPA
Sbjct: 228 DICVAHGYSGDVLQARDRAEEAGRGVTVDYLIPQEGAVLWFDVMAIPA 275
>gi|261404067|ref|YP_003240308.1| family 1 extracellular solute-binding protein [Paenibacillus sp.
Y412MC10]
gi|261280530|gb|ACX62501.1| extracellular solute-binding protein family 1 [Paenibacillus sp.
Y412MC10]
Length = 350
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
W+A WS D +VA VVP+ GA++++D +AIP ++
Sbjct: 226 WIATVWSGDAAFIAAENPDVAYVVPEEGATIFSDNYAIPKGAK 268
>gi|449468189|ref|XP_004151804.1| PREDICTED: putrescine-binding periplasmic protein-like, partial
[Cucumis sativus]
Length = 292
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 27/140 (19%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA + K A
Sbjct: 165 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADA---KNKEEAY 221
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAE 149
Q+ ++ ++ P + + + LV E ++ P++ PPA+
Sbjct: 222 QF-------LNYLMRPHTSNHVYYANGNKASVPLV---SEEIRNNPAI-------YPPAD 264
Query: 150 ILARCEFLEPLSEATFDVLR 169
+ A+ F + E D +R
Sbjct: 265 VFAKL-FTLKVQEPKIDRVR 283
>gi|334119180|ref|ZP_08493267.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
gi|333458651|gb|EGK87268.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
Length = 376
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 28/145 (19%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
D+ VA+ +SSD + + VVPKSG+SLW D IP S + A +W +
Sbjct: 251 DLKVAMCYSSDANEVISDNDKLKYVVPKSGSSLWTDTLVIPKGSPNPEA---AYKWINFM 307
Query: 95 IDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARC 154
+ P + L+ E + ++PS E LP E+ + D++ P +L +C
Sbjct: 308 LQPDVAASLV----ERLSFSTPS--EDAFSLLPPEVRE------NDIL--FPSEAVLKKC 353
Query: 155 EFLEPLSEATFDVLRWLKFLRFYEK 179
E + P+ KF+ Y++
Sbjct: 354 EGVAPVG----------KFMEVYDR 368
>gi|408378346|ref|ZP_11175943.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
albertimagni AOL15]
gi|407747483|gb|EKF59002.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
albertimagni AOL15]
Length = 366
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D+ + +GWS D+L A R + V+PK G +W D AIPA ++
Sbjct: 233 DICMTIGWSGDILQAKARAEEANNGVEINYVIPKEGTYMWFDNMAIPADAK 283
>gi|209918103|ref|YP_002292187.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SE11]
gi|417144631|ref|ZP_11986437.1| putrescine-binding periplasmic protein [Escherichia coli 1.2264]
gi|417152559|ref|ZP_11991350.1| putrescine-binding periplasmic protein [Escherichia coli 96.0497]
gi|417580120|ref|ZP_12230937.1| putrescine-binding periplasmic protein [Escherichia coli STEC_B2F1]
gi|433091183|ref|ZP_20277478.1| putrescine-binding periplasmic protein [Escherichia coli KTE138]
gi|209911362|dbj|BAG76436.1| putrescine ABC transporter substrate binding component [Escherichia
coli SE11]
gi|345342465|gb|EGW74859.1| putrescine-binding periplasmic protein [Escherichia coli STEC_B2F1]
gi|386164514|gb|EIH26300.1| putrescine-binding periplasmic protein [Escherichia coli 1.2264]
gi|386169283|gb|EIH35791.1| putrescine-binding periplasmic protein [Escherichia coli 96.0497]
gi|431613376|gb|ELI82573.1| putrescine-binding periplasmic protein [Escherichia coli KTE138]
Length = 370
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ ++PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFLIPKEGAMAFFDVFAMPADAK 287
>gi|432830829|ref|ZP_20064412.1| putrescine-binding periplasmic protein [Escherichia coli KTE135]
gi|431379670|gb|ELG64599.1| putrescine-binding periplasmic protein [Escherichia coli KTE135]
Length = 370
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ ++PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFLIPKEGAMAFFDVFAMPADAK 287
>gi|163847330|ref|YP_001635374.1| extracellular solute-binding protein [Chloroflexus aurantiacus
J-10-fl]
gi|163668619|gb|ABY34985.1| extracellular solute-binding protein family 1 [Chloroflexus
aurantiacus J-10-fl]
Length = 312
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 22 VVKLYTLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
VV Y LS+ VA+GW+ D A + N+A ++P G LW D + IP S
Sbjct: 175 VVTPYLLSDEH-----VVALGWTYDAFDAQAQNENIAYIIPAEGTILWFDNFVIPTTS 227
>gi|294624992|ref|ZP_06703643.1| periplasmic putrescine-binding protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600714|gb|EFF44800.1| periplasmic putrescine-binding protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 371
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
Y S A G + +AVGWS D++ A R VA +PK GA W D+ AIP +
Sbjct: 230 YVTSLANG--NTCLAVGWSGDIIQARDRAVEAGNNIKVAYAIPKEGAPQWFDMLAIPKDA 287
Query: 80 RLHKTNWRA 88
+ H N A
Sbjct: 288 K-HPDNAYA 295
>gi|398844426|ref|ZP_10601490.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
gi|398254512|gb|EJN39605.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
Length = 362
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
++ VA G+S DV A R +A +PK GA++W DL A+P S
Sbjct: 229 NICVAFGYSGDVFQAASRAQEAKNGVKIAYSIPKEGANIWFDLLAVPKDS 278
>gi|390450397|ref|ZP_10235990.1| extracellular solute-binding protein family 1 [Nitratireductor
aquibiodomus RA22]
gi|389662745|gb|EIM74302.1| extracellular solute-binding protein family 1 [Nitratireductor
aquibiodomus RA22]
Length = 365
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ +A+G+S D+ A R + V +PK GA LW D AIPA ++
Sbjct: 232 DICLALGYSGDIFQARDRAAEADQGVTVGYAIPKEGAMLWFDQMAIPADAK 282
>gi|409425581|ref|ZP_11260166.1| extracellular solute-binding protein [Pseudomonas sp. HYS]
Length = 359
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ V VG+S DVL A R V +PK GA +W D+ A+PA +
Sbjct: 218 YTGDLANG--DICVVVGFSGDVLQAKNRAEEAKNGVKVGYSIPKEGAPMWFDMVAMPADA 275
Query: 80 RLHKTNW 86
K +
Sbjct: 276 PDEKAGY 282
>gi|289665615|ref|ZP_06487196.1| ABC transporter putrescine-binding protein precursor [Xanthomonas
campestris pv. vasculorum NCPPB 702]
Length = 371
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
Y S A G + +AVGWS D++ A R VA +PK GA W D+ AIP +
Sbjct: 230 YVTSLANG--NTCLAVGWSGDIIQARDRAVEAGNNIKVAYAIPKEGAPQWFDMLAIPKDA 287
Query: 80 RLHKTNWRA 88
+ H N A
Sbjct: 288 K-HPDNAYA 295
>gi|289671377|ref|ZP_06492452.1| ABC transporter putrescine-binding protein precursor [Xanthomonas
campestris pv. musacearum NCPPB 4381]
Length = 371
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
Y S A G + +AVGWS D++ A R VA +PK GA W D+ AIP +
Sbjct: 230 YVTSLANG--NTCLAVGWSGDIIQARDRAVEAGNNIKVAYAIPKEGAPQWFDMLAIPKDA 287
Query: 80 RLHKTNWRA 88
+ H N A
Sbjct: 288 K-HPDNAYA 295
>gi|431930357|ref|YP_007243403.1| spermidine/putrescine-binding periplasmic protein [Thioflavicoccus
mobilis 8321]
gi|431828660|gb|AGA89773.1| spermidine/putrescine-binding periplasmic protein [Thioflavicoccus
mobilis 8321]
Length = 370
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 18/83 (21%)
Query: 1 MKGIVGAIRSIQESSTKFWYGVVKLYTLSEAFGIRDVWVAVGWSSDVLPAVKRMS----- 55
++GI IR I S Y A G D+ VA G+S DVL A R
Sbjct: 214 IEGIYPYIRYIHSSQ----------YISDLANG--DLCVAHGYSGDVLQAATRAEEAGGR 261
Query: 56 -NVAVVVPKSGASLWADLWAIPA 77
++ ++P+ GA LW D+ AIPA
Sbjct: 262 VSIDYLIPREGAVLWTDVIAIPA 284
>gi|432464817|ref|ZP_19706923.1| putrescine-binding periplasmic protein [Escherichia coli KTE205]
gi|432582913|ref|ZP_19819323.1| putrescine-binding periplasmic protein [Escherichia coli KTE57]
gi|433071904|ref|ZP_20258598.1| putrescine-binding periplasmic protein [Escherichia coli KTE129]
gi|433119402|ref|ZP_20305109.1| putrescine-binding periplasmic protein [Escherichia coli KTE157]
gi|433182391|ref|ZP_20366686.1| putrescine-binding periplasmic protein [Escherichia coli KTE85]
gi|430996623|gb|ELD12899.1| putrescine-binding periplasmic protein [Escherichia coli KTE205]
gi|431119929|gb|ELE22928.1| putrescine-binding periplasmic protein [Escherichia coli KTE57]
gi|431592074|gb|ELI62980.1| putrescine-binding periplasmic protein [Escherichia coli KTE129]
gi|431648264|gb|ELJ15663.1| putrescine-binding periplasmic protein [Escherichia coli KTE157]
gi|431711030|gb|ELJ75392.1| putrescine-binding periplasmic protein [Escherichia coli KTE85]
Length = 370
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA ++ D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMVFFDVFAMPADAK 287
>gi|346725344|ref|YP_004852013.1| periplasmic putrescine-binding protein [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346650091|gb|AEO42715.1| periplasmic putrescine-binding protein [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 371
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
Y S A G + +AVGWS D++ A R VA +PK GA W D+ AIP +
Sbjct: 230 YVTSLANG--NTCLAVGWSGDIIQARDRAVEAGNNIKVAYAIPKEGAPQWFDMLAIPKDA 287
Query: 80 RLHKTNWRA 88
+ H N A
Sbjct: 288 K-HPDNAYA 295
>gi|325925045|ref|ZP_08186467.1| spermidine/putrescine-binding periplasmic protein [Xanthomonas
perforans 91-118]
gi|325544557|gb|EGD15918.1| spermidine/putrescine-binding periplasmic protein [Xanthomonas
perforans 91-118]
Length = 371
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
Y S A G + +AVGWS D++ A R VA +PK GA W D+ AIP +
Sbjct: 230 YVTSLANG--NTCLAVGWSGDIIQARDRAVEAGNNIKVAYAIPKEGAPQWFDMLAIPKDA 287
Query: 80 RLHKTNWRA 88
+ H N A
Sbjct: 288 K-HPDNAYA 295
>gi|317047520|ref|YP_004115168.1| family 1 extracellular solute-binding protein [Pantoea sp. At-9b]
gi|316949137|gb|ADU68612.1| extracellular solute-binding protein family 1 [Pantoea sp. At-9b]
Length = 369
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
++ VA+GWS D+L A R + N+A VPK GA + D+ AIP ++
Sbjct: 236 NICVAIGWSGDILQAKDRAAQAKNGVNLAYSVPKQGALAFFDMMAIPKDAK 286
>gi|425899671|ref|ZP_18876262.1| periplasmic putrescine-binding protein [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|397890487|gb|EJL06969.1| periplasmic putrescine-binding protein [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
Length = 362
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
++ +A G+S DV A R +A +PK G++LW DL AIPA
Sbjct: 229 NICLAFGYSGDVFQAANRAKEAKNGVKIAYSIPKEGSNLWFDLLAIPA 276
>gi|425902196|ref|ZP_18878787.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|397881644|gb|EJK98133.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
Length = 364
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 76
++ VA G+S DV A R + +A V+PK G +LW D+ AIP
Sbjct: 231 EICVAAGFSGDVFQAKARAAEAGKGIEIAYVIPKEGGNLWFDMLAIP 277
>gi|167031932|ref|YP_001667163.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
gi|166858420|gb|ABY96827.1| extracellular solute-binding protein family 1 [Pseudomonas putida
GB-1]
Length = 359
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ V VG+S DVL A R V +PK GA +W D+ A+PA +
Sbjct: 218 YTGDLANG--DICVVVGFSGDVLQAKNRAEEAKNGVKVGYSIPKEGAPMWFDMVAMPADA 275
Query: 80 RLHKTNW 86
K +
Sbjct: 276 PDEKAGY 282
>gi|389682707|ref|ZP_10174045.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis O6]
gi|388553435|gb|EIM16690.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis O6]
Length = 364
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 76
++ VA G+S DV A R + +A V+PK G +LW D+ AIP
Sbjct: 231 EICVAAGFSGDVFQAKARAAEAGKGIEIAYVIPKEGGNLWFDMLAIP 277
>gi|390992013|ref|ZP_10262261.1| putrescine-binding periplasmic protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|418522939|ref|ZP_13088967.1| periplasmic putrescine-binding protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|372553237|emb|CCF69236.1| putrescine-binding periplasmic protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|410700551|gb|EKQ59101.1| periplasmic putrescine-binding protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 371
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
Y S A G + +AVGWS D++ A R VA +PK GA W D+ AIP +
Sbjct: 230 YVTSLANG--NTCLAVGWSGDIIQARDRAVEAGNNIKVAYAIPKEGAPQWFDMLAIPKDA 287
Query: 80 RLHKTNWRA 88
+ H N A
Sbjct: 288 K-HPDNAYA 295
>gi|389684610|ref|ZP_10175938.1| periplasmic putrescine-binding protein [Pseudomonas chlororaphis
O6]
gi|388551833|gb|EIM15098.1| periplasmic putrescine-binding protein [Pseudomonas chlororaphis
O6]
Length = 362
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
++ +A G+S DV A R +A +PK G++LW DL AIPA
Sbjct: 229 NICLAFGYSGDVFQAANRAKEAKNGVKIAYSIPKEGSNLWFDLLAIPA 276
>gi|374604938|ref|ZP_09677885.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
dendritiformis C454]
gi|374389461|gb|EHQ60836.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
dendritiformis C454]
Length = 344
Score = 37.7 bits (86), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
W+ WS D + +VA VVP+ G++++AD +AIP ++
Sbjct: 220 WIGTVWSGDAAFIAEENPDVAYVVPQEGSTIFADTYAIPKGAK 262
>gi|149377228|ref|ZP_01894976.1| extracellular solute-binding protein, family 1 [Marinobacter
algicola DG893]
gi|149358527|gb|EDM47001.1| extracellular solute-binding protein, family 1 [Marinobacter
algicola DG893]
Length = 368
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 79
D+ VA G+S D+L A R + +PK GA LW D+ IPA +
Sbjct: 235 DLCVAAGYSGDILQAAARAEEAGNGNVIRYTIPKEGAVLWFDMMTIPAGA 284
>gi|85705279|ref|ZP_01036378.1| ABC permidine/putrescine transporter, periplasmic substrate-binding
protein [Roseovarius sp. 217]
gi|85670152|gb|EAQ25014.1| ABC permidine/putrescine transporter, periplasmic substrate-binding
protein [Roseovarius sp. 217]
Length = 399
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 16/121 (13%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D W+ + W+ D + +A + K G +W+D +AIP + + + + +
Sbjct: 274 DAWLTMCWTGDGKQLNTDLPEIAFALGKEGGEIWSDYYAIPVGAPHREAAYALINY--LL 331
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
DP ++ +E + P A T LPE+LL P L P AE L E
Sbjct: 332 DPEVN------AREALAHGYPVADARTNALLPEDLLN-DPIL-------YPAAEALNALE 377
Query: 156 F 156
F
Sbjct: 378 F 378
>gi|427382355|ref|ZP_18879075.1| hypothetical protein HMPREF9447_00108 [Bacteroides oleiciplenus YIT
12058]
gi|425729600|gb|EKU92451.1| hypothetical protein HMPREF9447_00108 [Bacteroides oleiciplenus YIT
12058]
Length = 440
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASR 80
W+ + WS D + A++ V V VP+ G+++W D WAIP +R
Sbjct: 249 WLNLTWSGDAVWAIEEAEAVGVSLDYTVPREGSNIWYDGWAIPKYAR 295
>gi|399008900|ref|ZP_10711351.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
gi|398114411|gb|EJM04232.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
Length = 362
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
++ +A G+S DV A R +A +PK G++LW DL AIPA
Sbjct: 229 NICLAFGYSGDVFQAANRAKEAKNGVKIAYSIPKEGSNLWFDLLAIPA 276
>gi|295096449|emb|CBK85539.1| Spermidine/putrescine-binding periplasmic protein [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 370
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 31/144 (21%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA + K A
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADA---KNKEEAY 293
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSAL----ETTLVKLPEELLKGKPSLGTDLIAGV 145
Q+ ++ ++ P EVI S V L E ++ P++
Sbjct: 294 QF-------LNYLMRP---EVIAHISDHVYYANGNKASVPLVSEEIRNNPAI-------Y 336
Query: 146 PPAEILARCEFLEPLSEATFDVLR 169
PPA++ A+ F + E D +R
Sbjct: 337 PPADVFAKL-FTLKVQEPKIDRVR 359
>gi|189465552|ref|ZP_03014337.1| hypothetical protein BACINT_01910 [Bacteroides intestinalis DSM
17393]
gi|189437826|gb|EDV06811.1| hypothetical protein BACINT_01910 [Bacteroides intestinalis DSM
17393]
Length = 232
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASR 80
W+ + WS D + A++ V V VVP+ G+++W D WAIP +R
Sbjct: 41 WLNLTWSGDAVWAIEEAEAVDVDLDYVVPREGSNIWYDGWAIPKYAR 87
>gi|85058903|ref|YP_454605.1| spermidine/putrescine ABC transporter substrate-binding protein
[Sodalis glossinidius str. 'morsitans']
gi|84779423|dbj|BAE74200.1| putrescine ABC transporter periplasmic component [Sodalis
glossinidius str. 'morsitans']
Length = 369
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ V +GW DV+ A R N+A +PK GA + D+ AIPA ++
Sbjct: 236 DICVTIGWVGDVMQAANRAKEAKNGVNIAYSIPKEGALAFFDVLAIPADAK 286
>gi|399008538|ref|ZP_10711009.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
gi|398116267|gb|EJM06035.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
Length = 355
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 76
++ VA G+S DV A R + +A V+PK G +LW D+ AIP
Sbjct: 222 EICVAAGFSGDVFQAKARAAEAGKGIEIAYVIPKEGGNLWFDMLAIP 268
>gi|336177004|ref|YP_004582379.1| family 1 extracellular solute-binding protein [Frankia symbiont of
Datisca glomerata]
gi|334857984|gb|AEH08458.1| extracellular solute-binding protein family 1 [Frankia symbiont of
Datisca glomerata]
Length = 462
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
D+W+++ WS D+ A +++ V+P G LW D IP
Sbjct: 322 DIWLSMAWSGDIFQANSEGADLRFVIPAEGGILWTDSMCIP 362
>gi|384418972|ref|YP_005628332.1| periplasmic putrescine-binding protein [Xanthomonas oryzae pv.
oryzicola BLS256]
gi|353461885|gb|AEQ96164.1| periplasmic putrescine-binding protein [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 371
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
Y S A G + +AVGWS D++ A R VA +PK GA W D+ AIP +
Sbjct: 230 YVTSLANG--NACLAVGWSGDIIQARDRAVEAGNNIKVAYAIPKEGAPQWFDMLAIPKDA 287
Query: 80 RLHKTNWRA 88
+ H N A
Sbjct: 288 K-HPDNAYA 295
>gi|78048210|ref|YP_364385.1| ABC transporter putrescine-binding protein precursor [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|78036640|emb|CAJ24331.1| ABC transporter putrescine-binding protein precursor [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 371
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAAS 79
Y S A G + +AVGWS D++ A R VA +PK GA W D+ AIP +
Sbjct: 230 YVTSLANG--NTCLAVGWSGDIIQARDRAVEAGNNIKVAYAIPKEGAPQWFDMLAIPKDA 287
Query: 80 RLHKTNWRA 88
+ H N A
Sbjct: 288 K-HPDNAYA 295
>gi|417858952|ref|ZP_12504009.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium tumefaciens F2]
gi|338824956|gb|EGP58923.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium tumefaciens F2]
Length = 365
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D + +GWS D+L A R V V+PK G +W D AIPA ++
Sbjct: 232 DSCITIGWSGDILQAKSRAEEAKNGVEVNYVIPKEGTYMWFDNLAIPADAK 282
>gi|424909501|ref|ZP_18332878.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392845532|gb|EJA98054.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 365
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D + +GWS D+L A R V V+PK G +W D AIPA ++
Sbjct: 232 DSCITIGWSGDILQAKSRAEEAKNGVEVNYVIPKEGTYMWFDNLAIPADAK 282
>gi|397657008|ref|YP_006497710.1| putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella oxytoca E718]
gi|394345525|gb|AFN31646.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella oxytoca E718]
Length = 370
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYYIPKEGALAFFDVFAMPADAK 287
>gi|222525176|ref|YP_002569647.1| family 1 extracellular solute-binding protein [Chloroflexus sp.
Y-400-fl]
gi|222449055|gb|ACM53321.1| extracellular solute-binding protein family 1 [Chloroflexus sp.
Y-400-fl]
Length = 350
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 22 VVKLYTLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
VV Y LS+ + VA+GW+ D A + N+A ++P G LW D + IP S
Sbjct: 213 VVTPYLLSD-----EHVVALGWTYDAFDAQAQNENIAYIIPAEGTILWFDNFVIPTTS 265
>gi|440288330|ref|YP_007341095.1| spermidine/putrescine-binding periplasmic protein
[Enterobacteriaceae bacterium strain FGI 57]
gi|440047852|gb|AGB78910.1| spermidine/putrescine-binding periplasmic protein
[Enterobacteriaceae bacterium strain FGI 57]
Length = 370
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|13471137|ref|NP_102706.1| polyamine transport protein [Mesorhizobium loti MAFF303099]
gi|14021881|dbj|BAB48492.1| polyamine transport protein [Mesorhizobium loti MAFF303099]
Length = 365
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 76
A D+ +A+GWS DVL A R + +A VP+ G +W D AIP
Sbjct: 226 NALADGDICLAIGWSGDVLKARDRAAQAGNGITIAYSVPREGTVMWFDQLAIP 278
>gi|421725684|ref|ZP_16164869.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca M5al]
gi|410373478|gb|EKP28174.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca M5al]
Length = 370
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|261339163|ref|ZP_05967021.1| hypothetical protein ENTCAN_05386 [Enterobacter cancerogenus ATCC
35316]
gi|288319007|gb|EFC57945.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Enterobacter cancerogenus ATCC 35316]
Length = 370
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|423119457|ref|ZP_17107141.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5246]
gi|376398515|gb|EHT11140.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5246]
Length = 370
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|423107544|ref|ZP_17095239.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5243]
gi|376388316|gb|EHT01015.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5243]
Length = 370
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|91209888|ref|YP_539874.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli UTI89]
gi|117623034|ref|YP_851947.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli APEC O1]
gi|237707182|ref|ZP_04537663.1| putrescine-binding periplasmic protein [Escherichia sp. 3_2_53FAA]
gi|300991852|ref|ZP_07179677.1| bacterial extracellular solute-binding protein [Escherichia coli MS
200-1]
gi|331646122|ref|ZP_08347225.1| putrescine-binding periplasmic protein [Escherichia coli M605]
gi|422358904|ref|ZP_16439553.1| bacterial extracellular solute-binding protein [Escherichia coli MS
110-3]
gi|422368868|ref|ZP_16449272.1| bacterial extracellular solute-binding protein [Escherichia coli MS
16-3]
gi|422375650|ref|ZP_16455913.1| bacterial extracellular solute-binding protein [Escherichia coli MS
60-1]
gi|422378970|ref|ZP_16459173.1| bacterial extracellular solute-binding protein [Escherichia coli MS
57-2]
gi|91071462|gb|ABE06343.1| putrescine-binding periplasmic protein precursor [Escherichia coli
UTI89]
gi|115512158|gb|ABJ00233.1| putrescine-binding periplasmic protein precursor [Escherichia coli
APEC O1]
gi|226898392|gb|EEH84651.1| putrescine-binding periplasmic protein [Escherichia sp. 3_2_53FAA]
gi|300305462|gb|EFJ59982.1| bacterial extracellular solute-binding protein [Escherichia coli MS
200-1]
gi|315287314|gb|EFU46725.1| bacterial extracellular solute-binding protein [Escherichia coli MS
110-3]
gi|315299397|gb|EFU58649.1| bacterial extracellular solute-binding protein [Escherichia coli MS
16-3]
gi|324009780|gb|EGB78999.1| bacterial extracellular solute-binding protein [Escherichia coli MS
57-2]
gi|324013016|gb|EGB82235.1| bacterial extracellular solute-binding protein [Escherichia coli MS
60-1]
gi|331044874|gb|EGI17001.1| putrescine-binding periplasmic protein [Escherichia coli M605]
Length = 418
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 285 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 335
>gi|423128300|ref|ZP_17115979.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5250]
gi|376393656|gb|EHT06312.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5250]
Length = 370
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|354722725|ref|ZP_09036940.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter mori LMG 25706]
Length = 370
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|238757952|ref|ZP_04619134.1| Putrescine-binding periplasmic protein [Yersinia aldovae ATCC
35236]
gi|238703937|gb|EEP96472.1| Putrescine-binding periplasmic protein [Yersinia aldovae ATCC
35236]
Length = 369
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ D++ A R NVA +PK G + D++A+P+ ++
Sbjct: 236 DICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPKEGVLAFFDVFAMPSDAK 286
>gi|188496410|ref|ZP_03003680.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 53638]
gi|188491609|gb|EDU66712.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 53638]
Length = 420
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 287 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 337
>gi|429114895|ref|ZP_19175813.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 701]
gi|426318024|emb|CCK01926.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 701]
Length = 370
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 287
>gi|392978294|ref|YP_006476882.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter cloacae subsp. dissolvens SDM]
gi|392324227|gb|AFM59180.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter cloacae subsp. dissolvens
SDM]
Length = 370
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|375259929|ref|YP_005019099.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
oxytoca KCTC 1686]
gi|365909407|gb|AEX04860.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca KCTC 1686]
Length = 370
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYYIPKEGALAFFDVFAMPADAK 287
>gi|334122697|ref|ZP_08496733.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Enterobacter hormaechei ATCC 49162]
gi|333391812|gb|EGK62921.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Enterobacter hormaechei ATCC 49162]
Length = 370
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 31/144 (21%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA + K A
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADA---KNKDEAY 293
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSAL----ETTLVKLPEELLKGKPSLGTDLIAGV 145
Q+ ++ ++ P EVI S V L E ++ P++
Sbjct: 294 QF-------LNYLMRP---EVIAHISDHVYYANGNKASVPLVSEEIRNNPAI-------Y 336
Query: 146 PPAEILARCEFLEPLSEATFDVLR 169
PPA++ A+ F + E D +R
Sbjct: 337 PPADVFAKL-FTLKVQEPKIDRVR 359
>gi|296103163|ref|YP_003613309.1| putrescine transporter periplasmic-binding component [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057622|gb|ADF62360.1| putrescine transporter periplasmic-binding component [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 370
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|149194918|ref|ZP_01872011.1| Spermidine/putrescine-binding periplasmic protein [Caminibacter
mediatlanticus TB-2]
gi|149134839|gb|EDM23322.1| Spermidine/putrescine-binding periplasmic protein [Caminibacter
mediatlanticus TB-2]
Length = 292
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%)
Query: 37 VWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
+WV GW K N+ V PKSGA W D +AIP S+
Sbjct: 164 IWVETGWDGIGWNLHKENKNIDFVAPKSGALGWVDTFAIPRRSK 207
>gi|26246877|ref|NP_752917.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CFT073]
gi|227884182|ref|ZP_04001987.1| putrescine ABC superfamily ATP binding cassette transporter
periplasmic substrate-binding protein [Escherichia coli
83972]
gi|300993458|ref|ZP_07180400.1| bacterial extracellular solute-binding protein [Escherichia coli MS
45-1]
gi|301051218|ref|ZP_07198047.1| bacterial extracellular solute-binding protein [Escherichia coli MS
185-1]
gi|386628394|ref|YP_006148114.1| putrescine transporter subunit [Escherichia coli str. 'clone D i2']
gi|386633314|ref|YP_006153033.1| putrescine transporter subunit [Escherichia coli str. 'clone D
i14']
gi|422364764|ref|ZP_16445275.1| bacterial extracellular solute-binding protein [Escherichia coli MS
153-1]
gi|26107277|gb|AAN79460.1|AE016758_64 Putrescine-binding periplasmic protein precursor [Escherichia coli
CFT073]
gi|227838934|gb|EEJ49400.1| putrescine ABC superfamily ATP binding cassette transporter
periplasmic substrate-binding protein [Escherichia coli
83972]
gi|300297125|gb|EFJ53510.1| bacterial extracellular solute-binding protein [Escherichia coli MS
185-1]
gi|300406572|gb|EFJ90110.1| bacterial extracellular solute-binding protein [Escherichia coli MS
45-1]
gi|315292529|gb|EFU51881.1| bacterial extracellular solute-binding protein [Escherichia coli MS
153-1]
gi|355419293|gb|AER83490.1| putrescine transporter subunit [Escherichia coli str. 'clone D i2']
gi|355424213|gb|AER88409.1| putrescine transporter subunit [Escherichia coli str. 'clone D
i14']
Length = 418
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 285 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 335
>gi|423113485|ref|ZP_17101176.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5245]
gi|376388854|gb|EHT01547.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5245]
Length = 370
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|260597254|ref|YP_003209825.1| putrescine ABC transporter periplasmic binding protein [Cronobacter
turicensis z3032]
gi|260216431|emb|CBA29533.1| Putrescine-binding periplasmic protein [Cronobacter turicensis
z3032]
Length = 393
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 260 DICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 310
>gi|402842571|ref|ZP_10890983.1| putrescine-binding periplasmic protein [Klebsiella sp. OBRC7]
gi|423102198|ref|ZP_17089900.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5242]
gi|376390094|gb|EHT02781.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5242]
gi|402279513|gb|EJU28298.1| putrescine-binding periplasmic protein [Klebsiella sp. OBRC7]
Length = 370
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYYIPKEGALAFFDVFAMPADAK 287
>gi|365969713|ref|YP_004951274.1| putrescine-binding periplasmic protein [Enterobacter cloacae
EcWSU1]
gi|365748626|gb|AEW72853.1| Putrescine-binding periplasmic protein [Enterobacter cloacae
EcWSU1]
Length = 370
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|422782310|ref|ZP_16835095.1| extracellular solute-binding protein [Escherichia coli TW10509]
gi|323976761|gb|EGB71849.1| extracellular solute-binding protein [Escherichia coli TW10509]
Length = 395
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 262 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|422800217|ref|ZP_16848715.1| extracellular solute-binding protein [Escherichia coli M863]
gi|323967289|gb|EGB62712.1| extracellular solute-binding protein [Escherichia coli M863]
Length = 395
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 262 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|301020628|ref|ZP_07184703.1| bacterial extracellular solute-binding protein [Escherichia coli MS
69-1]
gi|300398604|gb|EFJ82142.1| bacterial extracellular solute-binding protein [Escherichia coli MS
69-1]
Length = 395
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 262 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|291281853|ref|YP_003498671.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O55:H7 str. CB9615]
gi|290761726|gb|ADD55687.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O55:H7 str. CB9615]
Length = 420
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 287 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 337
>gi|146311026|ref|YP_001176100.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter sp. 638]
gi|145317902|gb|ABP60049.1| extracellular solute-binding protein, family 1 [Enterobacter sp.
638]
Length = 370
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVTYTIPKEGALAFFDVFAMPADAK 287
>gi|401678958|ref|ZP_10810908.1| family 1 extracellular solute-binding protein [Enterobacter sp.
SST3]
gi|400213809|gb|EJO44745.1| family 1 extracellular solute-binding protein [Enterobacter sp.
SST3]
Length = 370
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|156934649|ref|YP_001438565.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii ATCC BAA-894]
gi|156532903|gb|ABU77729.1| hypothetical protein ESA_02483 [Cronobacter sakazakii ATCC BAA-894]
Length = 393
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 260 DICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 310
>gi|389684565|ref|ZP_10175893.1| periplasmic putrescine-binding protein, PotF family [Pseudomonas
chlororaphis O6]
gi|388551788|gb|EIM15053.1| periplasmic putrescine-binding protein, PotF family [Pseudomonas
chlororaphis O6]
Length = 364
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 26 YTLSEAFGIRDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAAS 79
YT A G D+ VAVG+S DVL A R + +PK GA +W D+ A+P +
Sbjct: 223 YTGDLANG--DICVAVGFSGDVLQADSRAKEAKNGVEIGYAIPKEGAPIWFDMVAMPNDA 280
Query: 80 RLHKTNW 86
K +
Sbjct: 281 PDEKAGY 287
>gi|163758096|ref|ZP_02165184.1| probable putrescine-binding periplasmic protein [Hoeflea
phototrophica DFL-43]
gi|162284385|gb|EDQ34668.1| probable putrescine-binding periplasmic protein [Hoeflea
phototrophica DFL-43]
Length = 353
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 23 VKLYTLSE---AFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLW 73
V+ Y SE A D+ +AVGWS D+L A R + VA +PK GA +W D
Sbjct: 204 VRKYHSSEYINALANGDICLAVGWSGDILQARDRAAEADAGVTVAYEIPKEGALMWFDNM 263
Query: 74 AIPAASR 80
AIP+ ++
Sbjct: 264 AIPSDAK 270
>gi|443471965|ref|ZP_21062002.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas pseudoalcaligenes KF707]
gi|442902190|gb|ELS27831.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas pseudoalcaligenes KF707]
Length = 361
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
DV +AVG+S D+L A R N+ PK G+ +W D+ A+PA
Sbjct: 228 DVCMAVGFSGDILQAATRAREAGNGVNIQYSTPKEGSPMWFDMVAMPA 275
>gi|345298511|ref|YP_004827869.1| family 1 extracellular solute-binding protein [Enterobacter
asburiae LF7a]
gi|345092448|gb|AEN64084.1| extracellular solute-binding protein family 1 [Enterobacter
asburiae LF7a]
Length = 370
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|331651869|ref|ZP_08352888.1| putrescine-binding periplasmic protein [Escherichia coli M718]
gi|331050147|gb|EGI22205.1| putrescine-binding periplasmic protein [Escherichia coli M718]
Length = 395
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 262 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|160882142|ref|ZP_02063145.1| hypothetical protein BACOVA_00085 [Bacteroides ovatus ATCC 8483]
gi|156112483|gb|EDO14228.1| ABC transporter, solute-binding protein [Bacteroides ovatus ATCC
8483]
Length = 443
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 18/144 (12%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSI 93
W+ + WS D + A++ + V V VP+ G+++W D W IP + N A+ + I
Sbjct: 249 WLNMTWSGDAIWAIEEANAVGVDLDYEVPEEGSNIWYDGWVIPK----YAGNPEAASYFI 304
Query: 94 SI--DPSMDRILLPFKQEVIPGTSPSALE----TTL---VKLPEELLKGKPSLGTDLIAG 144
+ P + + F V +P LE TTL L G S+ D I
Sbjct: 305 NFMCRPDIALRNMDFCGYVSSIATPEILEEKIDTTLHYYSDLSYFFGPGADSVQIDKIQ- 363
Query: 145 VPPAEILARCEFLEPLSEATFDVL 168
P +++ RC + + T +VL
Sbjct: 364 YPDRKVVERCAMIRDFGDKTKEVL 387
>gi|429081852|ref|ZP_19144947.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter condimenti 1330]
gi|426549418|emb|CCJ70988.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter condimenti 1330]
Length = 370
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 287
>gi|325272990|ref|ZP_08139306.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
gi|324101884|gb|EGB99414.1| extracellular solute-binding protein [Pseudomonas sp. TJI-51]
Length = 362
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
++ VA G+S DV A R VA +PK G++LW DL AIP
Sbjct: 229 NICVAFGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIP 275
>gi|300823995|ref|ZP_07104117.1| bacterial extracellular solute-binding protein [Escherichia coli MS
119-7]
gi|300921116|ref|ZP_07137500.1| bacterial extracellular solute-binding protein [Escherichia coli MS
115-1]
gi|301646291|ref|ZP_07246182.1| bacterial extracellular solute-binding protein [Escherichia coli MS
146-1]
gi|331641375|ref|ZP_08342510.1| putrescine-binding periplasmic protein [Escherichia coli H736]
gi|331676642|ref|ZP_08377338.1| putrescine-binding periplasmic protein [Escherichia coli H591]
gi|422793872|ref|ZP_16846565.1| extracellular solute-binding protein [Escherichia coli TA007]
gi|300411967|gb|EFJ95277.1| bacterial extracellular solute-binding protein [Escherichia coli MS
115-1]
gi|300523506|gb|EFK44575.1| bacterial extracellular solute-binding protein [Escherichia coli MS
119-7]
gi|301075494|gb|EFK90300.1| bacterial extracellular solute-binding protein [Escherichia coli MS
146-1]
gi|323969582|gb|EGB64870.1| extracellular solute-binding protein [Escherichia coli TA007]
gi|331038173|gb|EGI10393.1| putrescine-binding periplasmic protein [Escherichia coli H736]
gi|331075331|gb|EGI46629.1| putrescine-binding periplasmic protein [Escherichia coli H591]
Length = 395
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 262 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|398798502|ref|ZP_10557801.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
GM01]
gi|398100409|gb|EJL90648.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
GM01]
Length = 369
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
++ VA+GWS D+L A R ++ +VPK GA + D++AIP ++
Sbjct: 236 NICVAIGWSGDILQAKDRADKANNGVHLGYIVPKQGALAFFDMFAIPKDAK 286
>gi|300901217|ref|ZP_07119319.1| bacterial extracellular solute-binding protein [Escherichia coli MS
198-1]
gi|300939899|ref|ZP_07154534.1| bacterial extracellular solute-binding protein [Escherichia coli MS
21-1]
gi|331672393|ref|ZP_08373184.1| putrescine-binding periplasmic protein [Escherichia coli TA280]
gi|300355342|gb|EFJ71212.1| bacterial extracellular solute-binding protein [Escherichia coli MS
198-1]
gi|300455281|gb|EFK18774.1| bacterial extracellular solute-binding protein [Escherichia coli MS
21-1]
gi|331070588|gb|EGI41952.1| putrescine-binding periplasmic protein [Escherichia coli TA280]
Length = 395
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 262 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|300947056|ref|ZP_07161277.1| bacterial extracellular solute-binding protein [Escherichia coli MS
116-1]
gi|300957057|ref|ZP_07169303.1| bacterial extracellular solute-binding protein [Escherichia coli MS
175-1]
gi|422770088|ref|ZP_16823779.1| extracellular solute-binding protein [Escherichia coli E482]
gi|300316197|gb|EFJ65981.1| bacterial extracellular solute-binding protein [Escherichia coli MS
175-1]
gi|300453295|gb|EFK16915.1| bacterial extracellular solute-binding protein [Escherichia coli MS
116-1]
gi|323942771|gb|EGB38936.1| extracellular solute-binding protein [Escherichia coli E482]
Length = 415
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 282 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 332
>gi|298492376|ref|YP_003722553.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
0708]
gi|298234294|gb|ADI65430.1| extracellular solute-binding protein family 1 ['Nostoc azollae'
0708]
Length = 363
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 26/144 (18%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D+ +A+ +S+D + K + + V+P+SG+SLW D IP + ++
Sbjct: 239 DLLLAMCYSADGIKISKENAKLKYVIPRSGSSLWTDTIVIPKTAN-------------NL 285
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
+ I L K +V S T + E L + T+L PP IL +CE
Sbjct: 286 PGAYSWINLLLKPDVAAAISKRLNIATPNRAGFEQLPNQIQNNTNLF---PPQGILDKCE 342
Query: 156 FLEPLSEATFDVLRWLKFLRFYEK 179
+ P+ KF YE+
Sbjct: 343 RVTPIG----------KFEEVYER 356
>gi|309795351|ref|ZP_07689769.1| bacterial extracellular solute-binding protein [Escherichia coli MS
145-7]
gi|308121001|gb|EFO58263.1| bacterial extracellular solute-binding protein [Escherichia coli MS
145-7]
Length = 395
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 262 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|300817047|ref|ZP_07097266.1| bacterial extracellular solute-binding protein [Escherichia coli MS
107-1]
gi|332282252|ref|ZP_08394665.1| putrescine-binding periplasmic protein [Shigella sp. D9]
gi|415880496|ref|ZP_11545169.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli MS 79-10]
gi|300530399|gb|EFK51461.1| bacterial extracellular solute-binding protein [Escherichia coli MS
107-1]
gi|332104604|gb|EGJ07950.1| putrescine-binding periplasmic protein [Shigella sp. D9]
gi|342926405|gb|EGU95127.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli MS 79-10]
Length = 395
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 262 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|46578512|ref|YP_009320.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Desulfovibrio vulgaris str. Hildenborough]
gi|387151995|ref|YP_005700931.1| extracellular solute-binding protein [Desulfovibrio vulgaris RCH1]
gi|46447923|gb|AAS94579.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Desulfovibrio vulgaris str. Hildenborough]
gi|311232439|gb|ADP85293.1| extracellular solute-binding protein family 1 [Desulfovibrio
vulgaris RCH1]
Length = 345
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTN 85
+AF +V + W+ D A+ ++A V PK G LW D AIP + HK N
Sbjct: 213 QAFIAEEVKGGMSWNGDAFIAMNENPDLAFVYPKEGLPLWVDSLAIPIGAE-HKDN 267
>gi|422765428|ref|ZP_16819155.1| bacterial extracellular solute-binding protein [Escherichia coli
E1520]
gi|323937961|gb|EGB34223.1| bacterial extracellular solute-binding protein [Escherichia coli
E1520]
Length = 395
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 262 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|384542392|ref|YP_005726454.1| Putrescine-binding periplasmic protein [Shigella flexneri 2002017]
gi|281600177|gb|ADA73161.1| Putrescine-binding periplasmic protein [Shigella flexneri 2002017]
Length = 395
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 262 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|120603905|ref|YP_968305.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4]
gi|120564134|gb|ABM29878.1| extracellular solute-binding protein, family 1 [Desulfovibrio
vulgaris DP4]
Length = 345
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTN 85
+AF +V + W+ D A+ ++A V PK G LW D AIP + HK N
Sbjct: 213 QAFIAEEVKGGMSWNGDAFIAMNENPDLAFVYPKEGLPLWVDSLAIPIGAE-HKDN 267
>gi|398791267|ref|ZP_10552012.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
YR343]
gi|398215321|gb|EJN01884.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
YR343]
Length = 369
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
++ VA+GWS D+L A R ++ +VPK GA + D++AIP ++
Sbjct: 236 NICVAIGWSGDILQAKDRADKANNGVHLGYIVPKQGALAFFDMFAIPKDAK 286
>gi|419395467|ref|ZP_13936249.1| potF [Escherichia coli DEC15B]
gi|378250079|gb|EHY09987.1| potF [Escherichia coli DEC15B]
Length = 325
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 192 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 242
>gi|300902387|ref|ZP_07120370.1| bacterial extracellular solute-binding protein [Escherichia coli MS
84-1]
gi|301305374|ref|ZP_07211469.1| bacterial extracellular solute-binding protein [Escherichia coli MS
124-1]
gi|415860860|ref|ZP_11534575.1| bacterial extracellular solute-binding protein [Escherichia coli MS
85-1]
gi|300405534|gb|EFJ89072.1| bacterial extracellular solute-binding protein [Escherichia coli MS
84-1]
gi|300839392|gb|EFK67152.1| bacterial extracellular solute-binding protein [Escherichia coli MS
124-1]
gi|315257890|gb|EFU37858.1| bacterial extracellular solute-binding protein [Escherichia coli MS
85-1]
Length = 395
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 262 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|110804852|ref|YP_688372.1| spermidine/putrescine ABC transporter substrate-binding protein
[Shigella flexneri 5 str. 8401]
gi|424837314|ref|ZP_18261951.1| putrescine ABC transporter periplasmic-binding protein [Shigella
flexneri 5a str. M90T]
gi|110614400|gb|ABF03067.1| Putrescine-binding periplasmic protein precursor [Shigella flexneri
5 str. 8401]
gi|383466366|gb|EID61387.1| putrescine ABC transporter periplasmic-binding protein [Shigella
flexneri 5a str. M90T]
Length = 395
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 262 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|423139332|ref|ZP_17126970.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379051886|gb|EHY69777.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 371
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N+A +PK GA + D++A+PA ++
Sbjct: 238 DTCVAIGWAGDVWQAANRAKEAKNGVNIAFSIPKEGAMAFFDVFAMPADAK 288
>gi|432552849|ref|ZP_19789579.1| putrescine-binding periplasmic protein [Escherichia coli KTE47]
gi|431086421|gb|ELD92444.1| putrescine-binding periplasmic protein [Escherichia coli KTE47]
Length = 325
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 192 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 242
>gi|401762953|ref|YP_006577960.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400174487|gb|AFP69336.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 370
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAK 287
>gi|419305443|ref|ZP_13847353.1| putrescine-binding periplasmic protein [Escherichia coli DEC11D]
gi|378151922|gb|EHX13024.1| putrescine-binding periplasmic protein [Escherichia coli DEC11D]
Length = 325
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 192 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 242
>gi|300929337|ref|ZP_07144810.1| bacterial extracellular solute-binding protein [Escherichia coli MS
187-1]
gi|422785446|ref|ZP_16838185.1| extracellular solute-binding protein [Escherichia coli H489]
gi|300462683|gb|EFK26176.1| bacterial extracellular solute-binding protein [Escherichia coli MS
187-1]
gi|323962967|gb|EGB58539.1| extracellular solute-binding protein [Escherichia coli H489]
Length = 395
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 262 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|431802646|ref|YP_007229549.1| extracellular solute-binding protein [Pseudomonas putida HB3267]
gi|430793411|gb|AGA73606.1| extracellular solute-binding protein [Pseudomonas putida HB3267]
Length = 362
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIP 76
+V VA G+S DV A R +A +PK G++LW DL AIP
Sbjct: 229 NVCVAFGYSGDVFQAANRAVEAKNGLKIAYSIPKEGSNLWFDLLAIP 275
>gi|300924463|ref|ZP_07140433.1| bacterial extracellular solute-binding protein [Escherichia coli MS
182-1]
gi|301325862|ref|ZP_07219295.1| bacterial extracellular solute-binding protein [Escherichia coli MS
78-1]
gi|300419348|gb|EFK02659.1| bacterial extracellular solute-binding protein [Escherichia coli MS
182-1]
gi|300847376|gb|EFK75136.1| bacterial extracellular solute-binding protein [Escherichia coli MS
78-1]
Length = 395
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 262 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 312
>gi|94499306|ref|ZP_01305844.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Bermanella marisrubri]
gi|94428938|gb|EAT13910.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Oceanobacter sp. RED65]
Length = 361
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GWS DV A R +A +PK G ++W+D+ AIP ++
Sbjct: 230 DLCVAIGWSGDVFQAAARAEEAENGVEIAYYIPKEGTAMWSDMMAIPKDAK 280
>gi|417789994|ref|ZP_12437590.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii E899]
gi|449308836|ref|YP_007441192.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii SP291]
gi|333955915|gb|EGL73622.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii E899]
gi|449098869|gb|AGE86903.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii SP291]
Length = 370
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 287
>gi|389841581|ref|YP_006343665.1| putrescine transporter subunit PotF [Cronobacter sakazakii ES15]
gi|424798972|ref|ZP_18224514.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 696]
gi|429090151|ref|ZP_19152883.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter universalis NCTC 9529]
gi|429109669|ref|ZP_19171439.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 507]
gi|429122224|ref|ZP_19182813.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 680]
gi|387852057|gb|AFK00155.1| putrescine transporter subunit PotF [Cronobacter sakazakii ES15]
gi|423234693|emb|CCK06384.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 696]
gi|426310826|emb|CCJ97552.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 507]
gi|426323276|emb|CCK13550.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 680]
gi|426509954|emb|CCK17995.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter universalis NCTC 9529]
Length = 370
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 287
>gi|418296592|ref|ZP_12908435.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens CCNWGS0286]
gi|355538767|gb|EHH08009.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens CCNWGS0286]
Length = 365
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPAASR 80
D + +GWS D+L A R V ++PK G +W D AIPA ++
Sbjct: 232 DSCITIGWSGDILQAKSRAEEAKNGVEVNYIIPKEGTYMWFDNLAIPADAK 282
>gi|161503961|ref|YP_001571073.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|160865308|gb|ABX21931.1| hypothetical protein SARI_02053 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 371
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA R
Sbjct: 238 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADGR 288
>gi|431929348|ref|YP_007242382.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas
stutzeri RCH2]
gi|431827635|gb|AGA88752.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas
stutzeri RCH2]
Length = 361
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIPA 77
++ VA G+S DV A R +A +P GA+LW D+ AIPA
Sbjct: 228 NICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPAEGANLWFDMLAIPA 275
>gi|428211500|ref|YP_007084644.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
gi|427999881|gb|AFY80724.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
Length = 376
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 18/127 (14%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQW-SIS 94
D+ VA+G+S D L ++ VVP SG+SLW D IP R A W +
Sbjct: 250 DLEVAMGFSFDALSVSDENPDLEYVVPMSGSSLWTDTMVIP---RNAPNVQGAYAWINFM 306
Query: 95 IDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARC 154
P + L+ E + +P+ L+ + L+ P+L P +L RC
Sbjct: 307 FQPQVTADLI----ERLYFATPNRAAYNLLS---QELRENPTL-------FPSESVLERC 352
Query: 155 EFLEPLS 161
E + PLS
Sbjct: 353 EGILPLS 359
>gi|3891734|pdb|1A99|A Chain A, Putrescine Receptor (Potf) From E. Coli
gi|3891735|pdb|1A99|B Chain B, Putrescine Receptor (Potf) From E. Coli
gi|3891736|pdb|1A99|C Chain C, Putrescine Receptor (Potf) From E. Coli
gi|3891737|pdb|1A99|D Chain D, Putrescine Receptor (Potf) From E. Coli
Length = 344
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 211 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 261
>gi|397167724|ref|ZP_10491164.1| putrescine-binding periplasmic protein [Enterobacter radicincitans
DSM 16656]
gi|396090542|gb|EJI88112.1| putrescine-binding periplasmic protein [Enterobacter radicincitans
DSM 16656]
Length = 370
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNVTYTIPKEGALAFFDVFAMPADAK 287
>gi|417742354|ref|ZP_12390904.1| potF [Shigella flexneri 2930-71]
gi|417826927|ref|ZP_12473500.1| potF [Shigella flexneri J1713]
gi|332768025|gb|EGJ98211.1| potF [Shigella flexneri 2930-71]
gi|335576695|gb|EGM62940.1| potF [Shigella flexneri J1713]
Length = 353
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 220 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|429103745|ref|ZP_19165719.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter turicensis 564]
gi|426290394|emb|CCJ91832.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter turicensis 564]
Length = 370
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 287
>gi|417737718|ref|ZP_12386319.1| putrescine-binding periplasmic protein [Shigella flexneri 4343-70]
gi|332759765|gb|EGJ90068.1| putrescine-binding periplasmic protein [Shigella flexneri 4343-70]
Length = 353
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 220 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|429108125|ref|ZP_19169994.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 681]
gi|426294848|emb|CCJ96107.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 681]
Length = 370
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKEGALAFFDVFAMPADAK 287
>gi|419146898|ref|ZP_13691589.1| potF [Escherichia coli DEC6B]
gi|378000417|gb|EHV63488.1| potF [Escherichia coli DEC6B]
Length = 353
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 220 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|426409940|ref|YP_007030039.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
UW4]
gi|426268157|gb|AFY20234.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
UW4]
Length = 380
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D W+A+ W+ D + + + + K G LW+D +AIP +S HK A + +
Sbjct: 255 DAWLAMSWTGDASQLHRDNAQMQFELGKEGGELWSDFFAIPKSSE-HKDAAYAF-INYLL 312
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
DP +++ EV+ PS + LP +L D I P AE L+ E
Sbjct: 313 DPQHNKL------EVLSHGYPSGDKRVDALLPVAMLD-------DPIM-YPAAEALSPLE 358
Query: 156 F 156
F
Sbjct: 359 F 359
>gi|398919945|ref|ZP_10659018.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398168941|gb|EJM56939.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 380
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D W+A+ W+ D + + + + K G LW+D +AIP +S HK A + +
Sbjct: 255 DAWLAMSWTGDASQLHRDNAQMQFELGKEGGELWSDFFAIPKSSE-HKDAAYAF-INYLL 312
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
DP +++ EV+ PS + LP +L D I P AE L+ E
Sbjct: 313 DPQHNKL------EVLSHGYPSGDKRVDALLPVAMLD-------DPIM-YPAAEALSPLE 358
Query: 156 F 156
F
Sbjct: 359 F 359
>gi|420390323|ref|ZP_14889591.1| potF [Escherichia coli EPEC C342-62]
gi|391314647|gb|EIQ72197.1| potF [Escherichia coli EPEC C342-62]
Length = 353
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 220 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|452970892|ref|ZP_21969119.1| putrescine/spermidine ABC transporter substrate-binding protein
[Escherichia coli O157:H7 str. EC4009]
Length = 353
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 220 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 270
>gi|348618409|ref|ZP_08884935.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily (modular protein) [Candidatus
Glomeribacter gigasporarum BEG34]
gi|347816285|emb|CCD29675.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily (modular protein) [Candidatus
Glomeribacter gigasporarum BEG34]
Length = 463
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 9/62 (14%)
Query: 36 DVWVAVGWSSDVLPAVKRM------SNVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ +A GWS+D+ A +R + V+PKSGA ++ D+ AIP + K A
Sbjct: 250 DICLAFGWSNDIKIAKQRTLEAKKPYQIEYVIPKSGAPIFFDVMAIPKDA---KNKDAAH 306
Query: 90 QW 91
QW
Sbjct: 307 QW 308
>gi|163796118|ref|ZP_02190080.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [alpha
proteobacterium BAL199]
gi|159178577|gb|EDP63117.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [alpha
proteobacterium BAL199]
Length = 358
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 16/113 (14%)
Query: 43 WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISIDPSMDRI 102
W+ D+L + +++ VVP G LW D AIP + H N A + +D
Sbjct: 239 WNGDILQVMAEDKDISYVVPDEGGLLWEDTLAIPNGAP-HPENAHAF-INYLLDAKAGAA 296
Query: 103 LLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
+ F Q P + AL T G P++ P ++ARCE
Sbjct: 297 IADFIQYATPNAAAKALMKT-------EYTGNPAI-------FPSDAVIARCE 335
>gi|381172569|ref|ZP_09881694.1| putrescine-binding periplasmic protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380686987|emb|CCG38181.1| putrescine-binding periplasmic protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 371
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 39 VAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRA 88
+AVGWS D++ A R VA +PK GA W D+ AIP ++ H N A
Sbjct: 241 LAVGWSGDIIQARDRAVEAGNNIKVAYAIPKEGAPQWFDMLAIPKDAK-HPDNAYA 295
>gi|336249457|ref|YP_004593167.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter aerogenes KCTC 2190]
gi|444352385|ref|YP_007388529.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Enterobacter aerogenes EA1509E]
gi|334735513|gb|AEG97888.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter aerogenes KCTC 2190]
gi|443903215|emb|CCG30989.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Enterobacter aerogenes EA1509E]
Length = 370
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNISYFIPKEGALAFFDVFAMPADAK 287
>gi|420347881|ref|ZP_14849275.1| putrescine-binding periplasmic domain protein [Shigella boydii
965-58]
gi|391270022|gb|EIQ28919.1| putrescine-binding periplasmic domain protein [Shigella boydii
965-58]
Length = 181
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 48 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 98
>gi|388545309|ref|ZP_10148592.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. M47T1]
gi|388276629|gb|EIK96208.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. M47T1]
Length = 358
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ +AVGWS D++ A R V +P+ G W D+ A+PA
Sbjct: 225 DICMAVGWSGDIMQAASRAKEAGNGVKVQYEIPREGGPFWIDMMAMPA 272
>gi|226324583|ref|ZP_03800101.1| hypothetical protein COPCOM_02367 [Coprococcus comes ATCC 27758]
gi|225207031|gb|EEG89385.1| ABC transporter, solute-binding protein [Coprococcus comes ATCC
27758]
Length = 627
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 39 VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTN 85
+ V +S + + K N+ V+PK G+++W D W IP + HK N
Sbjct: 503 IGVIYSGEAIYTQKENPNLEYVIPKEGSNIWIDSWVIPKNAE-HKEN 548
>gi|297519467|ref|ZP_06937853.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli OP50]
Length = 185
Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 52 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 102
>gi|421858504|ref|ZP_16290771.1| spermidine/putrescine-binding periplasmic protein [Paenibacillus
popilliae ATCC 14706]
gi|410831949|dbj|GAC41208.1| spermidine/putrescine-binding periplasmic protein [Paenibacillus
popilliae ATCC 14706]
Length = 347
Score = 37.0 bits (84), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 38 WVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
W+ WS D +VA VVP+ G++++AD +AIP ++
Sbjct: 223 WIGTVWSGDAAFIAAENPDVAYVVPQEGSTIFADTYAIPKGAK 265
>gi|366159061|ref|ZP_09458923.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia sp. TW09308]
gi|432371595|ref|ZP_19614648.1| putrescine-binding periplasmic protein [Escherichia coli KTE11]
gi|430899033|gb|ELC21139.1| putrescine-binding periplasmic protein [Escherichia coli KTE11]
Length = 370
Score = 37.0 bits (84), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|74311398|ref|YP_309817.1| putrescine ABC transporter periplasmic-binding protein [Shigella
sonnei Ss046]
gi|383177490|ref|YP_005455495.1| putrescine ABC transporter periplasmic-binding protein [Shigella
sonnei 53G]
gi|414575112|ref|ZP_11432318.1| putrescine-binding periplasmic protein [Shigella sonnei 3233-85]
gi|415850294|ref|ZP_11527214.1| putrescine-binding periplasmic protein [Shigella sonnei 53G]
gi|418263261|ref|ZP_12884326.1| potF [Shigella sonnei str. Moseley]
gi|420357600|ref|ZP_14858606.1| putrescine-binding periplasmic protein [Shigella sonnei 3226-85]
gi|420362455|ref|ZP_14863371.1| potF [Shigella sonnei 4822-66]
gi|73854875|gb|AAZ87582.1| periplasmic putrescine-binding protein [Shigella sonnei Ss046]
gi|323165787|gb|EFZ51573.1| putrescine-binding periplasmic protein [Shigella sonnei 53G]
gi|391287188|gb|EIQ45719.1| putrescine-binding periplasmic protein [Shigella sonnei 3226-85]
gi|391288061|gb|EIQ46570.1| putrescine-binding periplasmic protein [Shigella sonnei 3233-85]
gi|391296028|gb|EIQ54144.1| potF [Shigella sonnei 4822-66]
gi|397902732|gb|EJL19044.1| potF [Shigella sonnei str. Moseley]
Length = 370
Score = 37.0 bits (84), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|422806126|ref|ZP_16854558.1| extracellular solute-binding protein [Escherichia fergusonii B253]
gi|324112664|gb|EGC06640.1| extracellular solute-binding protein [Escherichia fergusonii B253]
Length = 370
Score = 37.0 bits (84), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|432977512|ref|ZP_20166335.1| putrescine-binding periplasmic protein [Escherichia coli KTE209]
gi|433086463|ref|ZP_20272858.1| putrescine-binding periplasmic protein [Escherichia coli KTE137]
gi|431481023|gb|ELH60737.1| putrescine-binding periplasmic protein [Escherichia coli KTE209]
gi|431609120|gb|ELI78453.1| putrescine-binding periplasmic protein [Escherichia coli KTE137]
Length = 370
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|418254221|ref|ZP_12879118.1| potF [Shigella flexneri 6603-63]
gi|397900578|gb|EJL16937.1| potF [Shigella flexneri 6603-63]
Length = 370
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|419299149|ref|ZP_13841162.1| putrescine-binding periplasmic protein [Escherichia coli DEC11C]
gi|419873077|ref|ZP_14395081.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H2 str. CVM9450]
gi|378155103|gb|EHX16163.1| putrescine-binding periplasmic protein [Escherichia coli DEC11C]
gi|388332378|gb|EIK99049.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H2 str. CVM9450]
Length = 295
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|417601190|ref|ZP_12251772.1| putrescine-binding periplasmic protein [Escherichia coli STEC_94C]
gi|345353196|gb|EGW85432.1| putrescine-binding periplasmic protein [Escherichia coli STEC_94C]
Length = 370
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|387606407|ref|YP_006095263.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli 042]
gi|284920707|emb|CBG33770.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli 042]
Length = 370
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|237799632|ref|ZP_04588093.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022487|gb|EGI02544.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. oryzae str. 1_6]
Length = 359
Score = 37.0 bits (84), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 37 VWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPA 77
+ VAVG+S D+ A V N+ VVP+ GA +W D+ AIPA
Sbjct: 227 ICVAVGYSGDISQAQELAKKVADGPNITYVVPREGAPMWFDMIAIPA 273
>gi|30062336|ref|NP_836507.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Shigella flexneri 2a str. 2457T]
gi|56479743|ref|NP_706734.2| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Shigella flexneri 2a str. 301]
gi|415854716|ref|ZP_11530302.1| putrescine-binding periplasmic protein [Shigella flexneri 2a str.
2457T]
gi|417700887|ref|ZP_12350020.1| putrescine-binding periplasmic protein [Shigella flexneri K-218]
gi|417706478|ref|ZP_12355534.1| putrescine-binding periplasmic protein [Shigella flexneri VA-6]
gi|417716351|ref|ZP_12365280.1| putrescine-binding periplasmic protein [Shigella flexneri K-227]
gi|417721888|ref|ZP_12370729.1| putrescine-binding periplasmic protein [Shigella flexneri K-304]
gi|417727257|ref|ZP_12375998.1| putrescine-binding periplasmic protein [Shigella flexneri K-671]
gi|417732382|ref|ZP_12381051.1| putrescine-binding periplasmic protein [Shigella flexneri 2747-71]
gi|420319367|ref|ZP_14821220.1| putrescine-binding periplasmic protein [Shigella flexneri 2850-71]
gi|420340477|ref|ZP_14842001.1| putrescine-binding periplasmic protein [Shigella flexneri K-404]
gi|30040581|gb|AAP16313.1| periplasmic putrescine-binding protein; permease protein [Shigella
flexneri 2a str. 2457T]
gi|56383294|gb|AAN42441.2| periplasmic putrescine-binding protein; permease protein [Shigella
flexneri 2a str. 301]
gi|313650239|gb|EFS14651.1| putrescine-binding periplasmic protein [Shigella flexneri 2a str.
2457T]
gi|332760493|gb|EGJ90782.1| putrescine-binding periplasmic protein [Shigella flexneri 2747-71]
gi|332763068|gb|EGJ93313.1| putrescine-binding periplasmic protein [Shigella flexneri K-671]
gi|333006656|gb|EGK26155.1| putrescine-binding periplasmic protein [Shigella flexneri VA-6]
gi|333006922|gb|EGK26417.1| putrescine-binding periplasmic protein [Shigella flexneri K-218]
gi|333020148|gb|EGK39418.1| putrescine-binding periplasmic protein [Shigella flexneri K-227]
gi|333020972|gb|EGK40230.1| putrescine-binding periplasmic protein [Shigella flexneri K-304]
gi|391253555|gb|EIQ12728.1| putrescine-binding periplasmic protein [Shigella flexneri 2850-71]
gi|391273034|gb|EIQ31863.1| putrescine-binding periplasmic protein [Shigella flexneri K-404]
Length = 370
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|425421448|ref|ZP_18802655.1| putrescine-binding periplasmic protein [Escherichia coli 0.1288]
gi|408347112|gb|EKJ61346.1| putrescine-binding periplasmic protein [Escherichia coli 0.1288]
Length = 370
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|420380950|ref|ZP_14880405.1| putrescine-binding periplasmic protein [Shigella dysenteriae
225-75]
gi|391300985|gb|EIQ58888.1| putrescine-binding periplasmic protein [Shigella dysenteriae
225-75]
Length = 370
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|417209667|ref|ZP_12020951.1| putrescine-binding periplasmic protein [Escherichia coli JB1-95]
gi|419202092|ref|ZP_13745314.1| potF [Escherichia coli DEC8B]
gi|378055736|gb|EHW17997.1| potF [Escherichia coli DEC8B]
gi|386196292|gb|EIH90518.1| putrescine-binding periplasmic protein [Escherichia coli JB1-95]
Length = 370
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|417711617|ref|ZP_12360616.1| putrescine-binding periplasmic protein [Shigella flexneri K-272]
gi|333008839|gb|EGK28299.1| putrescine-binding periplasmic protein [Shigella flexneri K-272]
Length = 370
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|415836956|ref|ZP_11519206.1| putrescine-binding periplasmic protein [Escherichia coli RN587/1]
gi|417282938|ref|ZP_12070236.1| putrescine-binding periplasmic protein [Escherichia coli 3003]
gi|425276803|ref|ZP_18668129.1| putrescine-binding periplasmic protein [Escherichia coli ARS4.2123]
gi|323190676|gb|EFZ75945.1| putrescine-binding periplasmic protein [Escherichia coli RN587/1]
gi|386244143|gb|EII85875.1| putrescine-binding periplasmic protein [Escherichia coli 3003]
gi|408206064|gb|EKI30883.1| putrescine-binding periplasmic protein [Escherichia coli ARS4.2123]
Length = 370
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|416288836|ref|ZP_11649363.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella boydii ATCC 9905]
gi|320177812|gb|EFW52798.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella boydii ATCC 9905]
Length = 358
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|170682561|ref|YP_001742962.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SMS-3-5]
gi|218699230|ref|YP_002406859.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli IAI39]
gi|222155578|ref|YP_002555717.1| Putrescine-binding periplasmic protein [Escherichia coli LF82]
gi|386623257|ref|YP_006142985.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O7:K1 str. CE10]
gi|387616110|ref|YP_006119132.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O83:H1 str. NRG 857C]
gi|170520279|gb|ACB18457.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli SMS-3-5]
gi|218369216|emb|CAR16971.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli IAI39]
gi|222032583|emb|CAP75322.1| Putrescine-binding periplasmic protein [Escherichia coli LF82]
gi|312945371|gb|ADR26198.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O83:H1 str. NRG 857C]
gi|349736995|gb|AEQ11701.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O7:K1 str. CE10]
Length = 370
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|387611396|ref|YP_006114512.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli ETEC H10407]
gi|404374179|ref|ZP_10979398.1| putrescine-binding periplasmic protein [Escherichia sp. 1_1_43]
gi|432368912|ref|ZP_19612013.1| putrescine-binding periplasmic protein [Escherichia coli KTE10]
gi|432484548|ref|ZP_19726468.1| putrescine-binding periplasmic protein [Escherichia coli KTE212]
gi|432669800|ref|ZP_19905340.1| putrescine-binding periplasmic protein [Escherichia coli KTE119]
gi|432880589|ref|ZP_20097124.1| putrescine-binding periplasmic protein [Escherichia coli KTE154]
gi|433172684|ref|ZP_20357237.1| putrescine-binding periplasmic protein [Escherichia coli KTE232]
gi|309701132|emb|CBJ00430.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli ETEC H10407]
gi|404292237|gb|EJZ49066.1| putrescine-binding periplasmic protein [Escherichia sp. 1_1_43]
gi|430888124|gb|ELC10847.1| putrescine-binding periplasmic protein [Escherichia coli KTE10]
gi|431017699|gb|ELD31154.1| putrescine-binding periplasmic protein [Escherichia coli KTE212]
gi|431212330|gb|ELF10257.1| putrescine-binding periplasmic protein [Escherichia coli KTE119]
gi|431412817|gb|ELG95616.1| putrescine-binding periplasmic protein [Escherichia coli KTE154]
gi|431695675|gb|ELJ60977.1| putrescine-binding periplasmic protein [Escherichia coli KTE232]
Length = 370
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|71281371|ref|YP_271315.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Colwellia psychrerythraea 34H]
gi|71147111|gb|AAZ27584.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Colwellia psychrerythraea 34H]
Length = 361
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPA 77
D+ VA+G++ D+L A R S V ++PK G W D+ AIPA
Sbjct: 228 DICVALGYNGDMLQANSRASEAGQGVKVEYLIPKEGTIAWFDMMAIPA 275
>gi|417665994|ref|ZP_12315556.1| putrescine-binding periplasmic protein [Escherichia coli STEC_O31]
gi|397786545|gb|EJK97381.1| putrescine-binding periplasmic protein [Escherichia coli STEC_O31]
Length = 370
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|419917933|ref|ZP_14436152.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD2]
gi|432792074|ref|ZP_20026164.1| putrescine-binding periplasmic protein [Escherichia coli KTE78]
gi|432798037|ref|ZP_20032062.1| putrescine-binding periplasmic protein [Escherichia coli KTE79]
gi|388392734|gb|EIL54143.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD2]
gi|431341656|gb|ELG28662.1| putrescine-binding periplasmic protein [Escherichia coli KTE78]
gi|431345059|gb|ELG31991.1| putrescine-binding periplasmic protein [Escherichia coli KTE79]
Length = 370
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|331682363|ref|ZP_08382982.1| putrescine-binding periplasmic protein [Escherichia coli H299]
gi|432390887|ref|ZP_19633745.1| putrescine-binding periplasmic protein [Escherichia coli KTE21]
gi|432615685|ref|ZP_19851812.1| putrescine-binding periplasmic protein [Escherichia coli KTE75]
gi|450186707|ref|ZP_21889625.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli SEPT362]
gi|331079994|gb|EGI51173.1| putrescine-binding periplasmic protein [Escherichia coli H299]
gi|430921505|gb|ELC42329.1| putrescine-binding periplasmic protein [Escherichia coli KTE21]
gi|431156860|gb|ELE57526.1| putrescine-binding periplasmic protein [Escherichia coli KTE75]
gi|449324226|gb|EMD14163.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli SEPT362]
Length = 370
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|301027634|ref|ZP_07190954.1| bacterial extracellular solute-binding protein [Escherichia coli MS
196-1]
gi|299879236|gb|EFI87447.1| bacterial extracellular solute-binding protein [Escherichia coli MS
196-1]
Length = 370
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|218548373|ref|YP_002382164.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
fergusonii ATCC 35469]
gi|218355914|emb|CAQ88529.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia fergusonii ATCC 35469]
Length = 370
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|432946095|ref|ZP_20141788.1| putrescine-binding periplasmic protein [Escherichia coli KTE196]
gi|433042361|ref|ZP_20229883.1| putrescine-binding periplasmic protein [Escherichia coli KTE117]
gi|431462087|gb|ELH42305.1| putrescine-binding periplasmic protein [Escherichia coli KTE196]
gi|431559359|gb|ELI32919.1| putrescine-binding periplasmic protein [Escherichia coli KTE117]
Length = 370
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|82776067|ref|YP_402414.1| putrescine ABC transporter periplasmic-binding protein [Shigella
dysenteriae Sd197]
gi|309786474|ref|ZP_07681098.1| putrescine-binding periplasmic protein [Shigella dysenteriae 1617]
gi|81240215|gb|ABB60925.1| periplasmic putrescine-binding protein [Shigella dysenteriae Sd197]
gi|308925662|gb|EFP71145.1| putrescine-binding periplasmic protein [Shigella dysenteriae 1617]
Length = 370
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEANNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|15800606|ref|NP_286620.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. EDL933]
gi|15830188|ref|NP_308961.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. Sakai]
gi|168750039|ref|ZP_02775061.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4113]
gi|168756649|ref|ZP_02781656.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4401]
gi|168763295|ref|ZP_02788302.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4501]
gi|168767365|ref|ZP_02792372.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4486]
gi|168776396|ref|ZP_02801403.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4196]
gi|168779407|ref|ZP_02804414.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4076]
gi|168787076|ref|ZP_02812083.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC869]
gi|168799863|ref|ZP_02824870.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC508]
gi|195936899|ref|ZP_03082281.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. EC4024]
gi|208806865|ref|ZP_03249202.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4206]
gi|208816015|ref|ZP_03257194.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4045]
gi|208822677|ref|ZP_03262996.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4042]
gi|209397481|ref|YP_002269524.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. EC4115]
gi|217326518|ref|ZP_03442602.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. TW14588]
gi|254792050|ref|YP_003076887.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. TW14359]
gi|261225504|ref|ZP_05939785.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261258527|ref|ZP_05951060.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli O157:H7 str.
FRIK966]
gi|387505963|ref|YP_006158219.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O55:H7 str. RM12579]
gi|387881465|ref|YP_006311767.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli Xuzhou21]
gi|416309490|ref|ZP_11655862.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1044]
gi|416317369|ref|ZP_11660410.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. EC1212]
gi|416332128|ref|ZP_11670207.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1125]
gi|416781959|ref|ZP_11877428.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. G5101]
gi|416793190|ref|ZP_11882351.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. 493-89]
gi|416804456|ref|ZP_11887211.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. H 2687]
gi|416815481|ref|ZP_11891917.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. 3256-97]
gi|416825314|ref|ZP_11896502.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. USDA 5905]
gi|416836159|ref|ZP_11901774.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. LSU-61]
gi|419043994|ref|ZP_13590965.1| potF [Escherichia coli DEC3A]
gi|419049501|ref|ZP_13596417.1| potF [Escherichia coli DEC3B]
gi|419055582|ref|ZP_13602435.1| potF [Escherichia coli DEC3C]
gi|419061154|ref|ZP_13607933.1| potF [Escherichia coli DEC3D]
gi|419067252|ref|ZP_13613727.1| potF [Escherichia coli DEC3E]
gi|419074036|ref|ZP_13619604.1| potF [Escherichia coli DEC3F]
gi|419079265|ref|ZP_13624747.1| potF [Escherichia coli DEC4A]
gi|419084900|ref|ZP_13630309.1| potF [Escherichia coli DEC4B]
gi|419090906|ref|ZP_13636223.1| potF [Escherichia coli DEC4C]
gi|419096798|ref|ZP_13642040.1| potF [Escherichia coli DEC4D]
gi|419102640|ref|ZP_13647805.1| potF [Escherichia coli DEC4E]
gi|419108002|ref|ZP_13653111.1| potF [Escherichia coli DEC4F]
gi|419113771|ref|ZP_13658801.1| potF [Escherichia coli DEC5A]
gi|419119409|ref|ZP_13664387.1| potF [Escherichia coli DEC5B]
gi|419125105|ref|ZP_13670002.1| potF [Escherichia coli DEC5C]
gi|419130657|ref|ZP_13675504.1| potF [Escherichia coli DEC5D]
gi|419135384|ref|ZP_13680190.1| putrescine-binding periplasmic protein [Escherichia coli DEC5E]
gi|420268190|ref|ZP_14770594.1| putrescine-binding periplasmic protein [Escherichia coli PA22]
gi|420273938|ref|ZP_14776270.1| putrescine-binding periplasmic protein [Escherichia coli PA40]
gi|420279166|ref|ZP_14781431.1| putrescine-binding periplasmic protein [Escherichia coli TW06591]
gi|420285277|ref|ZP_14787492.1| putrescine-binding periplasmic protein [Escherichia coli TW10246]
gi|420291047|ref|ZP_14793210.1| putrescine-binding periplasmic protein [Escherichia coli TW11039]
gi|420296647|ref|ZP_14798740.1| putrescine-binding periplasmic protein [Escherichia coli TW09109]
gi|420302899|ref|ZP_14804925.1| putrescine-binding periplasmic protein [Escherichia coli TW10119]
gi|420308123|ref|ZP_14810095.1| putrescine-binding periplasmic protein [Escherichia coli EC1738]
gi|420313944|ref|ZP_14815849.1| putrescine-binding periplasmic protein [Escherichia coli EC1734]
gi|421811129|ref|ZP_16246928.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0416]
gi|421817210|ref|ZP_16252765.1| putrescine-binding periplasmic protein [Escherichia coli 10.0821]
gi|421822614|ref|ZP_16258051.1| putrescine-binding periplasmic protein [Escherichia coli FRIK920]
gi|421829352|ref|ZP_16264679.1| putrescine-binding periplasmic protein [Escherichia coli PA7]
gi|423664786|ref|ZP_17639948.1| putrescine-binding periplasmic protein [Escherichia coli PA31]
gi|424075800|ref|ZP_17813140.1| putrescine-binding periplasmic protein [Escherichia coli FDA505]
gi|424082129|ref|ZP_17818980.1| putrescine-binding periplasmic protein [Escherichia coli FDA517]
gi|424088762|ref|ZP_17825008.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1996]
gi|424094974|ref|ZP_17830719.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1985]
gi|424101395|ref|ZP_17836540.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1990]
gi|424108193|ref|ZP_17842759.1| putrescine-binding periplasmic protein [Escherichia coli 93-001]
gi|424114185|ref|ZP_17848321.1| putrescine-binding periplasmic protein [Escherichia coli PA3]
gi|424120244|ref|ZP_17853937.1| putrescine-binding periplasmic protein [Escherichia coli PA5]
gi|424126484|ref|ZP_17859679.1| putrescine-binding periplasmic protein [Escherichia coli PA9]
gi|424132590|ref|ZP_17865381.1| putrescine-binding periplasmic protein [Escherichia coli PA10]
gi|424139133|ref|ZP_17871418.1| putrescine-binding periplasmic protein [Escherichia coli PA14]
gi|424145574|ref|ZP_17877334.1| putrescine-binding periplasmic protein [Escherichia coli PA15]
gi|424151707|ref|ZP_17882953.1| putrescine-binding periplasmic protein [Escherichia coli PA24]
gi|424190199|ref|ZP_17888392.1| putrescine-binding periplasmic protein [Escherichia coli PA25]
gi|424271769|ref|ZP_17894300.1| putrescine-binding periplasmic protein [Escherichia coli PA28]
gi|424425517|ref|ZP_17900023.1| putrescine-binding periplasmic protein [Escherichia coli PA32]
gi|424454119|ref|ZP_17905645.1| putrescine-binding periplasmic protein [Escherichia coli PA33]
gi|424460434|ref|ZP_17911345.1| putrescine-binding periplasmic protein [Escherichia coli PA39]
gi|424466903|ref|ZP_17917082.1| putrescine-binding periplasmic protein [Escherichia coli PA41]
gi|424473467|ref|ZP_17923127.1| putrescine-binding periplasmic protein [Escherichia coli PA42]
gi|424479398|ref|ZP_17928637.1| putrescine-binding periplasmic protein [Escherichia coli TW07945]
gi|424485468|ref|ZP_17934323.1| putrescine-binding periplasmic protein [Escherichia coli TW09098]
gi|424491650|ref|ZP_17939985.1| putrescine-binding periplasmic protein [Escherichia coli TW09195]
gi|424498687|ref|ZP_17945949.1| putrescine-binding periplasmic protein [Escherichia coli EC4203]
gi|424504922|ref|ZP_17951683.1| putrescine-binding periplasmic protein [Escherichia coli EC4196]
gi|424511172|ref|ZP_17957385.1| putrescine-binding periplasmic protein [Escherichia coli TW14313]
gi|424518707|ref|ZP_17963131.1| putrescine-binding periplasmic protein [Escherichia coli TW14301]
gi|424524565|ref|ZP_17968579.1| putrescine-binding periplasmic protein [Escherichia coli EC4421]
gi|424530770|ref|ZP_17974385.1| putrescine-binding periplasmic protein [Escherichia coli EC4422]
gi|424536747|ref|ZP_17979997.1| putrescine-binding periplasmic protein [Escherichia coli EC4013]
gi|424542666|ref|ZP_17985464.1| putrescine-binding periplasmic protein [Escherichia coli EC4402]
gi|424548983|ref|ZP_17991173.1| putrescine-binding periplasmic protein [Escherichia coli EC4439]
gi|424555230|ref|ZP_17996943.1| putrescine-binding periplasmic protein [Escherichia coli EC4436]
gi|424561586|ref|ZP_18002866.1| putrescine-binding periplasmic protein [Escherichia coli EC4437]
gi|424567616|ref|ZP_18008520.1| putrescine-binding periplasmic protein [Escherichia coli EC4448]
gi|424573808|ref|ZP_18014218.1| putrescine-binding periplasmic protein [Escherichia coli EC1845]
gi|424579757|ref|ZP_18019678.1| putrescine-binding periplasmic protein [Escherichia coli EC1863]
gi|425096428|ref|ZP_18499441.1| putrescine-binding periplasmic protein [Escherichia coli 3.4870]
gi|425102572|ref|ZP_18505212.1| putrescine-binding periplasmic protein [Escherichia coli 5.2239]
gi|425108377|ref|ZP_18510615.1| bacterial extracellular solute-binding protein [Escherichia coli
6.0172]
gi|425124212|ref|ZP_18525770.1| putrescine-binding periplasmic protein [Escherichia coli 8.0586]
gi|425130241|ref|ZP_18531330.1| putrescine-binding periplasmic protein [Escherichia coli 8.2524]
gi|425136608|ref|ZP_18537322.1| bacterial extracellular solute-binding protein [Escherichia coli
10.0833]
gi|425142447|ref|ZP_18542734.1| putrescine-binding periplasmic protein [Escherichia coli 10.0869]
gi|425148796|ref|ZP_18548673.1| putrescine-binding periplasmic protein [Escherichia coli 88.0221]
gi|425154400|ref|ZP_18553942.1| putrescine-binding periplasmic protein [Escherichia coli PA34]
gi|425160846|ref|ZP_18560017.1| putrescine-binding periplasmic protein [Escherichia coli FDA506]
gi|425166374|ref|ZP_18565175.1| putrescine-binding periplasmic protein [Escherichia coli FDA507]
gi|425172659|ref|ZP_18571048.1| putrescine-binding periplasmic protein [Escherichia coli FDA504]
gi|425178551|ref|ZP_18576593.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1999]
gi|425184697|ref|ZP_18582311.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1997]
gi|425191456|ref|ZP_18588572.1| putrescine-binding periplasmic protein [Escherichia coli NE1487]
gi|425197765|ref|ZP_18594407.1| putrescine-binding periplasmic protein [Escherichia coli NE037]
gi|425204431|ref|ZP_18600551.1| putrescine-binding periplasmic protein [Escherichia coli FRIK2001]
gi|425210183|ref|ZP_18605909.1| bacterial extracellular solute-binding protein [Escherichia coli
PA4]
gi|425216236|ref|ZP_18611541.1| putrescine-binding periplasmic protein [Escherichia coli PA23]
gi|425222818|ref|ZP_18617660.1| putrescine-binding periplasmic protein [Escherichia coli PA49]
gi|425229043|ref|ZP_18623426.1| putrescine-binding periplasmic protein [Escherichia coli PA45]
gi|425235348|ref|ZP_18629302.1| putrescine-binding periplasmic protein [Escherichia coli TT12B]
gi|425241345|ref|ZP_18634973.1| putrescine-binding periplasmic protein [Escherichia coli MA6]
gi|425247471|ref|ZP_18640666.1| putrescine-binding periplasmic protein [Escherichia coli 5905]
gi|425253208|ref|ZP_18646067.1| putrescine-binding periplasmic protein [Escherichia coli CB7326]
gi|425259483|ref|ZP_18651842.1| putrescine-binding periplasmic protein [Escherichia coli EC96038]
gi|425265629|ref|ZP_18657530.1| putrescine-binding periplasmic protein [Escherichia coli 5412]
gi|425293065|ref|ZP_18683633.1| putrescine-binding periplasmic protein [Escherichia coli PA38]
gi|425309798|ref|ZP_18699252.1| putrescine-binding periplasmic protein [Escherichia coli EC1735]
gi|425315720|ref|ZP_18704783.1| putrescine-binding periplasmic protein [Escherichia coli EC1736]
gi|425321786|ref|ZP_18710444.1| putrescine-binding periplasmic protein [Escherichia coli EC1737]
gi|425327978|ref|ZP_18716184.1| putrescine-binding periplasmic protein [Escherichia coli EC1846]
gi|425334164|ref|ZP_18721866.1| putrescine-binding periplasmic protein [Escherichia coli EC1847]
gi|425340576|ref|ZP_18727801.1| putrescine-binding periplasmic protein [Escherichia coli EC1848]
gi|425346443|ref|ZP_18733234.1| putrescine-binding periplasmic protein [Escherichia coli EC1849]
gi|425352679|ref|ZP_18739043.1| putrescine-binding periplasmic protein [Escherichia coli EC1850]
gi|425358668|ref|ZP_18744625.1| putrescine-binding periplasmic protein [Escherichia coli EC1856]
gi|425364782|ref|ZP_18750308.1| putrescine-binding periplasmic protein [Escherichia coli EC1862]
gi|425371229|ref|ZP_18756175.1| putrescine-binding periplasmic protein [Escherichia coli EC1864]
gi|425384022|ref|ZP_18767885.1| putrescine-binding periplasmic protein [Escherichia coli EC1866]
gi|425390712|ref|ZP_18774152.1| putrescine-binding periplasmic protein [Escherichia coli EC1868]
gi|425396831|ref|ZP_18779860.1| putrescine-binding periplasmic protein [Escherichia coli EC1869]
gi|425402818|ref|ZP_18785409.1| putrescine-binding periplasmic protein [Escherichia coli EC1870]
gi|425409356|ref|ZP_18791494.1| putrescine-binding periplasmic protein [Escherichia coli NE098]
gi|425415637|ref|ZP_18797257.1| putrescine-binding periplasmic protein [Escherichia coli FRIK523]
gi|425426770|ref|ZP_18807809.1| putrescine-binding periplasmic protein [Escherichia coli 0.1304]
gi|428945467|ref|ZP_19018081.1| putrescine-binding periplasmic protein [Escherichia coli 88.1467]
gi|428951601|ref|ZP_19023707.1| putrescine-binding periplasmic protein [Escherichia coli 88.1042]
gi|428957463|ref|ZP_19029130.1| putrescine-binding periplasmic protein [Escherichia coli 89.0511]
gi|428963788|ref|ZP_19034949.1| putrescine-binding periplasmic protein [Escherichia coli 90.0091]
gi|428970085|ref|ZP_19040698.1| putrescine-binding periplasmic protein [Escherichia coli 90.0039]
gi|428976320|ref|ZP_19046474.1| putrescine-binding periplasmic protein [Escherichia coli 90.2281]
gi|428982164|ref|ZP_19051881.1| putrescine-binding periplasmic protein [Escherichia coli 93.0055]
gi|428988392|ref|ZP_19057659.1| putrescine-binding periplasmic protein [Escherichia coli 93.0056]
gi|428994192|ref|ZP_19063083.1| putrescine-binding periplasmic protein [Escherichia coli 94.0618]
gi|429000330|ref|ZP_19068816.1| putrescine-binding periplasmic protein [Escherichia coli 95.0183]
gi|429006513|ref|ZP_19074403.1| putrescine-binding periplasmic protein [Escherichia coli 95.1288]
gi|429012847|ref|ZP_19080084.1| putrescine-binding periplasmic protein [Escherichia coli 95.0943]
gi|429019033|ref|ZP_19085798.1| putrescine-binding periplasmic protein [Escherichia coli 96.0428]
gi|429024771|ref|ZP_19091161.1| putrescine-binding periplasmic protein [Escherichia coli 96.0427]
gi|429031104|ref|ZP_19096955.1| putrescine-binding periplasmic protein [Escherichia coli 96.0939]
gi|429037257|ref|ZP_19102681.1| putrescine-binding periplasmic protein [Escherichia coli 96.0932]
gi|429043208|ref|ZP_19108188.1| putrescine-binding periplasmic protein [Escherichia coli 96.0107]
gi|429054348|ref|ZP_19118821.1| putrescine-binding periplasmic protein [Escherichia coli 97.1742]
gi|429059993|ref|ZP_19124125.1| putrescine-binding periplasmic protein [Escherichia coli 97.0007]
gi|429065501|ref|ZP_19129341.1| putrescine-binding periplasmic protein [Escherichia coli 99.0672]
gi|429072024|ref|ZP_19135370.1| bacterial extracellular solute-binding protein [Escherichia coli
99.0678]
gi|429077351|ref|ZP_19140559.1| putrescine-binding periplasmic protein [Escherichia coli 99.0713]
gi|429824593|ref|ZP_19356063.1| putrescine-binding periplasmic protein [Escherichia coli 96.0109]
gi|429830949|ref|ZP_19361762.1| putrescine-binding periplasmic protein [Escherichia coli 97.0010]
gi|444923286|ref|ZP_21242964.1| putrescine-binding periplasmic protein [Escherichia coli
09BKT078844]
gi|444929588|ref|ZP_21248728.1| putrescine-binding periplasmic protein [Escherichia coli 99.0814]
gi|444934879|ref|ZP_21253805.1| putrescine-binding periplasmic protein [Escherichia coli 99.0815]
gi|444940477|ref|ZP_21259112.1| putrescine-binding periplasmic protein [Escherichia coli 99.0816]
gi|444945996|ref|ZP_21264407.1| putrescine-binding periplasmic protein [Escherichia coli 99.0839]
gi|444951622|ref|ZP_21269834.1| putrescine-binding periplasmic protein [Escherichia coli 99.0848]
gi|444957096|ref|ZP_21275083.1| putrescine-binding periplasmic protein [Escherichia coli 99.1753]
gi|444962346|ref|ZP_21280084.1| putrescine-binding periplasmic protein [Escherichia coli 99.1775]
gi|444968098|ref|ZP_21285564.1| putrescine-binding periplasmic protein [Escherichia coli 99.1793]
gi|444973600|ref|ZP_21290868.1| putrescine-binding periplasmic protein [Escherichia coli 99.1805]
gi|444979146|ref|ZP_21296131.1| putrescine-binding periplasmic protein [Escherichia coli ATCC
700728]
gi|444984435|ref|ZP_21301295.1| putrescine-binding periplasmic protein [Escherichia coli PA11]
gi|444989680|ref|ZP_21306411.1| putrescine-binding periplasmic protein [Escherichia coli PA19]
gi|444995028|ref|ZP_21311616.1| putrescine-binding periplasmic protein [Escherichia coli PA13]
gi|445000539|ref|ZP_21316993.1| putrescine-binding periplasmic protein [Escherichia coli PA2]
gi|445005998|ref|ZP_21322328.1| putrescine-binding periplasmic protein [Escherichia coli PA47]
gi|445011109|ref|ZP_21327293.1| putrescine-binding periplasmic protein [Escherichia coli PA48]
gi|445016943|ref|ZP_21332985.1| putrescine-binding periplasmic protein [Escherichia coli PA8]
gi|445022379|ref|ZP_21338293.1| putrescine-binding periplasmic protein [Escherichia coli 7.1982]
gi|445027636|ref|ZP_21343404.1| putrescine-binding periplasmic protein [Escherichia coli 99.1781]
gi|445033139|ref|ZP_21348751.1| putrescine-binding periplasmic protein [Escherichia coli 99.1762]
gi|445038828|ref|ZP_21354290.1| putrescine-binding periplasmic protein [Escherichia coli PA35]
gi|445044128|ref|ZP_21359455.1| putrescine-binding periplasmic protein [Escherichia coli 3.4880]
gi|445049620|ref|ZP_21364776.1| putrescine-binding periplasmic protein [Escherichia coli 95.0083]
gi|445055272|ref|ZP_21370213.1| putrescine-binding periplasmic protein [Escherichia coli 99.0670]
gi|12513869|gb|AAG55230.1|AE005266_9 periplasmic putrescine-binding protein; permease protein
[Escherichia coli O157:H7 str. EDL933]
gi|13360393|dbj|BAB34357.1| periplasmic putrescine-binding permease protein [Escherichia coli
O157:H7 str. Sakai]
gi|187768225|gb|EDU32069.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4196]
gi|188015747|gb|EDU53869.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4113]
gi|189002793|gb|EDU71779.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4076]
gi|189356266|gb|EDU74685.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4401]
gi|189363385|gb|EDU81804.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4486]
gi|189366515|gb|EDU84931.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4501]
gi|189372977|gb|EDU91393.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC869]
gi|189377706|gb|EDU96122.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC508]
gi|208726666|gb|EDZ76267.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4206]
gi|208732663|gb|EDZ81351.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4045]
gi|208738162|gb|EDZ85845.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4042]
gi|209158881|gb|ACI36314.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4115]
gi|209775388|gb|ACI86006.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775390|gb|ACI86007.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775392|gb|ACI86008.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775394|gb|ACI86009.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775396|gb|ACI86010.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|217322739|gb|EEC31163.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. TW14588]
gi|254591450|gb|ACT70811.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. TW14359]
gi|320192665|gb|EFW67306.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. EC1212]
gi|320637720|gb|EFX07512.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. G5101]
gi|320642844|gb|EFX12045.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. 493-89]
gi|320648301|gb|EFX16956.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. H 2687]
gi|320654138|gb|EFX22206.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320659762|gb|EFX27318.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. USDA 5905]
gi|320664232|gb|EFX31383.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. LSU-61]
gi|326338256|gb|EGD62085.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1125]
gi|326346233|gb|EGD69971.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1044]
gi|374357957|gb|AEZ39664.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. RM12579]
gi|377899613|gb|EHU63959.1| potF [Escherichia coli DEC3A]
gi|377901563|gb|EHU65879.1| potF [Escherichia coli DEC3B]
gi|377913174|gb|EHU77318.1| potF [Escherichia coli DEC3C]
gi|377917240|gb|EHU81305.1| potF [Escherichia coli DEC3D]
gi|377919920|gb|EHU83954.1| potF [Escherichia coli DEC3E]
gi|377931012|gb|EHU94882.1| potF [Escherichia coli DEC3F]
gi|377933372|gb|EHU97217.1| potF [Escherichia coli DEC4A]
gi|377938272|gb|EHV02040.1| potF [Escherichia coli DEC4B]
gi|377949065|gb|EHV12705.1| potF [Escherichia coli DEC4C]
gi|377950236|gb|EHV13864.1| potF [Escherichia coli DEC4D]
gi|377953808|gb|EHV17372.1| potF [Escherichia coli DEC4E]
gi|377964471|gb|EHV27906.1| potF [Escherichia coli DEC5A]
gi|377966369|gb|EHV29781.1| potF [Escherichia coli DEC4F]
gi|377971052|gb|EHV34409.1| potF [Escherichia coli DEC5B]
gi|377979034|gb|EHV42312.1| potF [Escherichia coli DEC5C]
gi|377979228|gb|EHV42505.1| potF [Escherichia coli DEC5D]
gi|377986533|gb|EHV49723.1| putrescine-binding periplasmic protein [Escherichia coli DEC5E]
gi|386794923|gb|AFJ27957.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli Xuzhou21]
gi|390649846|gb|EIN28318.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1996]
gi|390651735|gb|EIN30005.1| putrescine-binding periplasmic protein [Escherichia coli FDA517]
gi|390652334|gb|EIN30558.1| putrescine-binding periplasmic protein [Escherichia coli FDA505]
gi|390669119|gb|EIN45824.1| putrescine-binding periplasmic protein [Escherichia coli 93-001]
gi|390671954|gb|EIN48323.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1990]
gi|390672408|gb|EIN48710.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1985]
gi|390687857|gb|EIN63002.1| putrescine-binding periplasmic protein [Escherichia coli PA3]
gi|390690748|gb|EIN65534.1| putrescine-binding periplasmic protein [Escherichia coli PA9]
gi|390691427|gb|EIN66175.1| putrescine-binding periplasmic protein [Escherichia coli PA5]
gi|390707547|gb|EIN80891.1| putrescine-binding periplasmic protein [Escherichia coli PA10]
gi|390709358|gb|EIN82468.1| putrescine-binding periplasmic protein [Escherichia coli PA15]
gi|390710585|gb|EIN83603.1| putrescine-binding periplasmic protein [Escherichia coli PA14]
gi|390719497|gb|EIN92222.1| putrescine-binding periplasmic protein [Escherichia coli PA22]
gi|390732637|gb|EIO04322.1| putrescine-binding periplasmic protein [Escherichia coli PA25]
gi|390732735|gb|EIO04413.1| putrescine-binding periplasmic protein [Escherichia coli PA24]
gi|390735312|gb|EIO06706.1| putrescine-binding periplasmic protein [Escherichia coli PA28]
gi|390750969|gb|EIO20945.1| putrescine-binding periplasmic protein [Escherichia coli PA31]
gi|390751331|gb|EIO21246.1| putrescine-binding periplasmic protein [Escherichia coli PA32]
gi|390754208|gb|EIO23830.1| putrescine-binding periplasmic protein [Escherichia coli PA33]
gi|390762025|gb|EIO31295.1| putrescine-binding periplasmic protein [Escherichia coli PA40]
gi|390775337|gb|EIO43404.1| putrescine-binding periplasmic protein [Escherichia coli PA41]
gi|390776898|gb|EIO44777.1| putrescine-binding periplasmic protein [Escherichia coli PA42]
gi|390780850|gb|EIO48540.1| putrescine-binding periplasmic protein [Escherichia coli PA39]
gi|390784876|gb|EIO52432.1| putrescine-binding periplasmic protein [Escherichia coli TW06591]
gi|390794140|gb|EIO61439.1| putrescine-binding periplasmic protein [Escherichia coli TW10246]
gi|390801078|gb|EIO68144.1| putrescine-binding periplasmic protein [Escherichia coli TW11039]
gi|390808183|gb|EIO75029.1| putrescine-binding periplasmic protein [Escherichia coli TW07945]
gi|390811385|gb|EIO78099.1| putrescine-binding periplasmic protein [Escherichia coli TW09109]
gi|390818724|gb|EIO85093.1| putrescine-binding periplasmic protein [Escherichia coli TW10119]
gi|390821550|gb|EIO87733.1| putrescine-binding periplasmic protein [Escherichia coli TW09098]
gi|390836209|gb|EIP00762.1| putrescine-binding periplasmic protein [Escherichia coli EC4203]
gi|390838943|gb|EIP03120.1| putrescine-binding periplasmic protein [Escherichia coli EC4196]
gi|390839560|gb|EIP03661.1| putrescine-binding periplasmic protein [Escherichia coli TW09195]
gi|390854808|gb|EIP17585.1| putrescine-binding periplasmic protein [Escherichia coli TW14301]
gi|390857497|gb|EIP19925.1| putrescine-binding periplasmic protein [Escherichia coli TW14313]
gi|390857924|gb|EIP20345.1| putrescine-binding periplasmic protein [Escherichia coli EC4421]
gi|390870573|gb|EIP32074.1| putrescine-binding periplasmic protein [Escherichia coli EC4422]
gi|390875019|gb|EIP36101.1| putrescine-binding periplasmic protein [Escherichia coli EC4013]
gi|390884737|gb|EIP45010.1| putrescine-binding periplasmic protein [Escherichia coli EC4402]
gi|390887235|gb|EIP47221.1| putrescine-binding periplasmic protein [Escherichia coli EC4439]
gi|390893064|gb|EIP52632.1| putrescine-binding periplasmic protein [Escherichia coli EC4436]
gi|390903518|gb|EIP62564.1| putrescine-binding periplasmic protein [Escherichia coli EC1738]
gi|390908495|gb|EIP67318.1| putrescine-binding periplasmic protein [Escherichia coli EC4437]
gi|390911438|gb|EIP70143.1| putrescine-binding periplasmic protein [Escherichia coli EC1734]
gi|390913492|gb|EIP72078.1| putrescine-binding periplasmic protein [Escherichia coli EC4448]
gi|390924171|gb|EIP81973.1| putrescine-binding periplasmic protein [Escherichia coli EC1863]
gi|390925768|gb|EIP83401.1| putrescine-binding periplasmic protein [Escherichia coli EC1845]
gi|408071679|gb|EKH06014.1| putrescine-binding periplasmic protein [Escherichia coli PA7]
gi|408075796|gb|EKH10028.1| putrescine-binding periplasmic protein [Escherichia coli FRIK920]
gi|408085451|gb|EKH19075.1| putrescine-binding periplasmic protein [Escherichia coli PA34]
gi|408089287|gb|EKH22618.1| putrescine-binding periplasmic protein [Escherichia coli FDA506]
gi|408094081|gb|EKH27126.1| putrescine-binding periplasmic protein [Escherichia coli FDA507]
gi|408101117|gb|EKH33586.1| putrescine-binding periplasmic protein [Escherichia coli FDA504]
gi|408109370|gb|EKH41297.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1999]
gi|408115823|gb|EKH47188.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1997]
gi|408121136|gb|EKH52100.1| putrescine-binding periplasmic protein [Escherichia coli NE1487]
gi|408129305|gb|EKH59538.1| putrescine-binding periplasmic protein [Escherichia coli NE037]
gi|408131027|gb|EKH61088.1| putrescine-binding periplasmic protein [Escherichia coli FRIK2001]
gi|408140179|gb|EKH69714.1| bacterial extracellular solute-binding protein [Escherichia coli
PA4]
gi|408149503|gb|EKH78181.1| putrescine-binding periplasmic protein [Escherichia coli PA23]
gi|408151363|gb|EKH79871.1| putrescine-binding periplasmic protein [Escherichia coli PA49]
gi|408156509|gb|EKH84711.1| putrescine-binding periplasmic protein [Escherichia coli PA45]
gi|408166220|gb|EKH93838.1| putrescine-binding periplasmic protein [Escherichia coli TT12B]
gi|408170931|gb|EKH98081.1| putrescine-binding periplasmic protein [Escherichia coli MA6]
gi|408172925|gb|EKH99977.1| putrescine-binding periplasmic protein [Escherichia coli 5905]
gi|408186208|gb|EKI12315.1| putrescine-binding periplasmic protein [Escherichia coli CB7326]
gi|408190227|gb|EKI15898.1| putrescine-binding periplasmic protein [Escherichia coli 5412]
gi|408190518|gb|EKI16163.1| putrescine-binding periplasmic protein [Escherichia coli EC96038]
gi|408231932|gb|EKI55192.1| putrescine-binding periplasmic protein [Escherichia coli PA38]
gi|408237541|gb|EKI60396.1| putrescine-binding periplasmic protein [Escherichia coli EC1735]
gi|408248449|gb|EKI70498.1| putrescine-binding periplasmic protein [Escherichia coli EC1736]
gi|408252163|gb|EKI73860.1| putrescine-binding periplasmic protein [Escherichia coli EC1737]
gi|408258338|gb|EKI79612.1| putrescine-binding periplasmic protein [Escherichia coli EC1846]
gi|408267294|gb|EKI87758.1| putrescine-binding periplasmic protein [Escherichia coli EC1847]
gi|408268977|gb|EKI89299.1| putrescine-binding periplasmic protein [Escherichia coli EC1848]
gi|408278245|gb|EKI98007.1| putrescine-binding periplasmic protein [Escherichia coli EC1849]
gi|408284083|gb|EKJ03212.1| putrescine-binding periplasmic protein [Escherichia coli EC1850]
gi|408286693|gb|EKJ05612.1| putrescine-binding periplasmic protein [Escherichia coli EC1856]
gi|408299337|gb|EKJ17148.1| putrescine-binding periplasmic protein [Escherichia coli EC1862]
gi|408299613|gb|EKJ17384.1| putrescine-binding periplasmic protein [Escherichia coli EC1864]
gi|408315542|gb|EKJ31857.1| putrescine-binding periplasmic protein [Escherichia coli EC1868]
gi|408315977|gb|EKJ32275.1| putrescine-binding periplasmic protein [Escherichia coli EC1866]
gi|408330518|gb|EKJ45781.1| putrescine-binding periplasmic protein [Escherichia coli EC1869]
gi|408335392|gb|EKJ50238.1| putrescine-binding periplasmic protein [Escherichia coli NE098]
gi|408337053|gb|EKJ51799.1| putrescine-binding periplasmic protein [Escherichia coli EC1870]
gi|408349769|gb|EKJ63691.1| putrescine-binding periplasmic protein [Escherichia coli FRIK523]
gi|408352658|gb|EKJ66202.1| putrescine-binding periplasmic protein [Escherichia coli 0.1304]
gi|408557774|gb|EKK34197.1| putrescine-binding periplasmic protein [Escherichia coli 5.2239]
gi|408558042|gb|EKK34457.1| putrescine-binding periplasmic protein [Escherichia coli 3.4870]
gi|408558495|gb|EKK34859.1| bacterial extracellular solute-binding protein [Escherichia coli
6.0172]
gi|408584608|gb|EKK59608.1| putrescine-binding periplasmic protein [Escherichia coli 8.0586]
gi|408588631|gb|EKK63203.1| putrescine-binding periplasmic protein [Escherichia coli 8.2524]
gi|408589636|gb|EKK64138.1| bacterial extracellular solute-binding protein [Escherichia coli
10.0833]
gi|408603451|gb|EKK77092.1| putrescine-binding periplasmic protein [Escherichia coli 10.0869]
gi|408605201|gb|EKK78730.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0416]
gi|408606704|gb|EKK80130.1| putrescine-binding periplasmic protein [Escherichia coli 88.0221]
gi|408616403|gb|EKK89558.1| putrescine-binding periplasmic protein [Escherichia coli 10.0821]
gi|427213627|gb|EKV83032.1| putrescine-binding periplasmic protein [Escherichia coli 88.1042]
gi|427215477|gb|EKV84659.1| putrescine-binding periplasmic protein [Escherichia coli 89.0511]
gi|427215607|gb|EKV84779.1| putrescine-binding periplasmic protein [Escherichia coli 88.1467]
gi|427232863|gb|EKW00662.1| putrescine-binding periplasmic protein [Escherichia coli 90.2281]
gi|427233218|gb|EKW01004.1| putrescine-binding periplasmic protein [Escherichia coli 90.0039]
gi|427234674|gb|EKW02351.1| putrescine-binding periplasmic protein [Escherichia coli 90.0091]
gi|427250446|gb|EKW17117.1| putrescine-binding periplasmic protein [Escherichia coli 93.0056]
gi|427252048|gb|EKW18570.1| putrescine-binding periplasmic protein [Escherichia coli 93.0055]
gi|427253304|gb|EKW19746.1| putrescine-binding periplasmic protein [Escherichia coli 94.0618]
gi|427269565|gb|EKW34522.1| putrescine-binding periplasmic protein [Escherichia coli 95.0183]
gi|427269724|gb|EKW34676.1| putrescine-binding periplasmic protein [Escherichia coli 95.0943]
gi|427274058|gb|EKW38723.1| putrescine-binding periplasmic protein [Escherichia coli 95.1288]
gi|427285691|gb|EKW49630.1| putrescine-binding periplasmic protein [Escherichia coli 96.0428]
gi|427291178|gb|EKW54622.1| putrescine-binding periplasmic protein [Escherichia coli 96.0427]
gi|427292734|gb|EKW56061.1| putrescine-binding periplasmic protein [Escherichia coli 96.0939]
gi|427305378|gb|EKW67973.1| putrescine-binding periplasmic protein [Escherichia coli 96.0932]
gi|427309436|gb|EKW71754.1| putrescine-binding periplasmic protein [Escherichia coli 96.0107]
gi|427320592|gb|EKW82347.1| putrescine-binding periplasmic protein [Escherichia coli 97.1742]
gi|427321409|gb|EKW83103.1| putrescine-binding periplasmic protein [Escherichia coli 97.0007]
gi|427333243|gb|EKW94353.1| putrescine-binding periplasmic protein [Escherichia coli 99.0713]
gi|427333455|gb|EKW94560.1| bacterial extracellular solute-binding protein [Escherichia coli
99.0678]
gi|427336396|gb|EKW97374.1| putrescine-binding periplasmic protein [Escherichia coli 99.0672]
gi|429259352|gb|EKY43049.1| putrescine-binding periplasmic protein [Escherichia coli 96.0109]
gi|429261409|gb|EKY44854.1| putrescine-binding periplasmic protein [Escherichia coli 97.0010]
gi|444541887|gb|ELV21323.1| putrescine-binding periplasmic protein [Escherichia coli 99.0814]
gi|444549449|gb|ELV27692.1| putrescine-binding periplasmic protein [Escherichia coli
09BKT078844]
gi|444551304|gb|ELV29275.1| putrescine-binding periplasmic protein [Escherichia coli 99.0815]
gi|444564170|gb|ELV41127.1| putrescine-binding periplasmic protein [Escherichia coli 99.0839]
gi|444566023|gb|ELV42861.1| putrescine-binding periplasmic protein [Escherichia coli 99.0816]
gi|444570228|gb|ELV46770.1| putrescine-binding periplasmic protein [Escherichia coli 99.0848]
gi|444581156|gb|ELV57024.1| putrescine-binding periplasmic protein [Escherichia coli 99.1753]
gi|444584205|gb|ELV59856.1| putrescine-binding periplasmic protein [Escherichia coli 99.1775]
gi|444585293|gb|ELV60871.1| putrescine-binding periplasmic protein [Escherichia coli 99.1793]
gi|444598736|gb|ELV73649.1| putrescine-binding periplasmic protein [Escherichia coli ATCC
700728]
gi|444599301|gb|ELV74191.1| putrescine-binding periplasmic protein [Escherichia coli PA11]
gi|444606929|gb|ELV81530.1| putrescine-binding periplasmic protein [Escherichia coli 99.1805]
gi|444613461|gb|ELV87720.1| putrescine-binding periplasmic protein [Escherichia coli PA19]
gi|444613578|gb|ELV87836.1| putrescine-binding periplasmic protein [Escherichia coli PA13]
gi|444621892|gb|ELV95860.1| putrescine-binding periplasmic protein [Escherichia coli PA2]
gi|444631250|gb|ELW04854.1| putrescine-binding periplasmic protein [Escherichia coli PA48]
gi|444631514|gb|ELW05112.1| putrescine-binding periplasmic protein [Escherichia coli PA47]
gi|444636282|gb|ELW09684.1| putrescine-binding periplasmic protein [Escherichia coli PA8]
gi|444646662|gb|ELW19664.1| putrescine-binding periplasmic protein [Escherichia coli 7.1982]
gi|444649330|gb|ELW22231.1| putrescine-binding periplasmic protein [Escherichia coli 99.1781]
gi|444652302|gb|ELW25065.1| putrescine-binding periplasmic protein [Escherichia coli 99.1762]
gi|444661777|gb|ELW34065.1| putrescine-binding periplasmic protein [Escherichia coli PA35]
gi|444665940|gb|ELW38034.1| putrescine-binding periplasmic protein [Escherichia coli 3.4880]
gi|444672019|gb|ELW43779.1| putrescine-binding periplasmic protein [Escherichia coli 95.0083]
gi|444674070|gb|ELW45654.1| putrescine-binding periplasmic protein [Escherichia coli 99.0670]
Length = 370
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|422830736|ref|ZP_16878890.1| putrescine-binding periplasmic protein [Escherichia coli B093]
gi|371603842|gb|EHN92477.1| putrescine-binding periplasmic protein [Escherichia coli B093]
Length = 370
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|260854146|ref|YP_003228037.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. 11368]
gi|415785124|ref|ZP_11492761.1| putrescine-binding periplasmic protein [Escherichia coli EPECa14]
gi|417295212|ref|ZP_12082468.1| putrescine-binding periplasmic protein [Escherichia coli 900105
(10e)]
gi|419208005|ref|ZP_13751128.1| potF [Escherichia coli DEC8C]
gi|419214551|ref|ZP_13757573.1| potF [Escherichia coli DEC8D]
gi|419220151|ref|ZP_13763103.1| potF [Escherichia coli DEC8E]
gi|419225642|ref|ZP_13768525.1| potF [Escherichia coli DEC9A]
gi|419231629|ref|ZP_13774417.1| potF [Escherichia coli DEC9B]
gi|419236828|ref|ZP_13779571.1| potF [Escherichia coli DEC9C]
gi|419242358|ref|ZP_13785005.1| potF [Escherichia coli DEC9D]
gi|419247875|ref|ZP_13790482.1| potF [Escherichia coli DEC9E]
gi|419253613|ref|ZP_13796152.1| potF [Escherichia coli DEC10A]
gi|419259675|ref|ZP_13802119.1| potF [Escherichia coli DEC10B]
gi|419265753|ref|ZP_13808134.1| potF [Escherichia coli DEC10C]
gi|419271357|ref|ZP_13813681.1| potF [Escherichia coli DEC10D]
gi|419282843|ref|ZP_13825054.1| potF [Escherichia coli DEC10F]
gi|419874556|ref|ZP_14396479.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9534]
gi|419885475|ref|ZP_14406218.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9545]
gi|419902683|ref|ZP_14421875.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9942]
gi|419909554|ref|ZP_14428111.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. CVM10026]
gi|420105546|ref|ZP_14616016.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9455]
gi|420111561|ref|ZP_14621389.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9553]
gi|420117654|ref|ZP_14627009.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10021]
gi|420124077|ref|ZP_14632947.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10030]
gi|420129649|ref|ZP_14638175.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10224]
gi|420133082|ref|ZP_14641352.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9952]
gi|424747221|ref|ZP_18175418.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424755887|ref|ZP_18183731.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425377764|ref|ZP_18762130.1| putrescine-binding periplasmic protein [Escherichia coli EC1865]
gi|257752795|dbj|BAI24297.1| putrescine transporter subunit PotF [Escherichia coli O26:H11 str.
11368]
gi|323155772|gb|EFZ41941.1| putrescine-binding periplasmic protein [Escherichia coli EPECa14]
gi|378061179|gb|EHW23365.1| potF [Escherichia coli DEC8C]
gi|378066804|gb|EHW28932.1| potF [Escherichia coli DEC8D]
gi|378071385|gb|EHW33455.1| potF [Escherichia coli DEC8E]
gi|378080011|gb|EHW41977.1| potF [Escherichia coli DEC9A]
gi|378081347|gb|EHW43302.1| potF [Escherichia coli DEC9B]
gi|378087691|gb|EHW49547.1| potF [Escherichia coli DEC9C]
gi|378093709|gb|EHW55513.1| potF [Escherichia coli DEC9D]
gi|378100040|gb|EHW61737.1| potF [Escherichia coli DEC9E]
gi|378105153|gb|EHW66800.1| potF [Escherichia coli DEC10A]
gi|378114455|gb|EHW76011.1| potF [Escherichia coli DEC10B]
gi|378117332|gb|EHW78848.1| potF [Escherichia coli DEC10C]
gi|378120888|gb|EHW82350.1| potF [Escherichia coli DEC10D]
gi|378138045|gb|EHW99306.1| potF [Escherichia coli DEC10F]
gi|386261575|gb|EIJ17040.1| putrescine-binding periplasmic protein [Escherichia coli 900105
(10e)]
gi|388349802|gb|EIL15254.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9545]
gi|388350747|gb|EIL16075.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9534]
gi|388372924|gb|EIL36301.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. CVM10026]
gi|388373469|gb|EIL36739.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9942]
gi|394381956|gb|EJE59609.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10224]
gi|394395831|gb|EJE72224.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9455]
gi|394398150|gb|EJE74350.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9553]
gi|394401884|gb|EJE77653.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10021]
gi|394415718|gb|EJE89562.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10030]
gi|394426734|gb|EJE99527.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9952]
gi|408308734|gb|EKJ25967.1| putrescine-binding periplasmic protein [Escherichia coli EC1865]
gi|421946651|gb|EKU03767.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421949939|gb|EKU06844.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str.
CFSAN001630]
Length = 370
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|218704278|ref|YP_002411797.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli UMN026]
gi|293404158|ref|ZP_06648152.1| putrescine transporter subunit protein [Escherichia coli FVEC1412]
gi|293409229|ref|ZP_06652805.1| hypothetical protein ECEG_00160 [Escherichia coli B354]
gi|298379941|ref|ZP_06989546.1| putrescine transporter [Escherichia coli FVEC1302]
gi|331662266|ref|ZP_08363189.1| putrescine-binding periplasmic protein [Escherichia coli TA143]
gi|416896433|ref|ZP_11926280.1| putrescine-binding periplasmic protein [Escherichia coli STEC_7v]
gi|417118740|ref|ZP_11969258.1| putrescine-binding periplasmic protein [Escherichia coli 1.2741]
gi|417137151|ref|ZP_11980941.1| putrescine-binding periplasmic protein [Escherichia coli 97.0259]
gi|417307307|ref|ZP_12094179.1| Putrescine-binding periplasmic protein [Escherichia coli PCN033]
gi|417585791|ref|ZP_12236564.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_C165-02]
gi|419936211|ref|ZP_14453231.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 576-1]
gi|422332326|ref|ZP_16413340.1| putrescine-binding periplasmic protein [Escherichia coli 4_1_47FAA]
gi|422970756|ref|ZP_16974268.1| putrescine-binding periplasmic protein [Escherichia coli TA124]
gi|424815776|ref|ZP_18240927.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia fergusonii ECD227]
gi|432352815|ref|ZP_19596099.1| putrescine-binding periplasmic protein [Escherichia coli KTE2]
gi|432401049|ref|ZP_19643803.1| putrescine-binding periplasmic protein [Escherichia coli KTE26]
gi|432425105|ref|ZP_19667620.1| putrescine-binding periplasmic protein [Escherichia coli KTE181]
gi|432459876|ref|ZP_19702033.1| putrescine-binding periplasmic protein [Escherichia coli KTE204]
gi|432474965|ref|ZP_19716973.1| putrescine-binding periplasmic protein [Escherichia coli KTE208]
gi|432488498|ref|ZP_19730383.1| putrescine-binding periplasmic protein [Escherichia coli KTE213]
gi|432521547|ref|ZP_19758703.1| putrescine-binding periplasmic protein [Escherichia coli KTE228]
gi|432536914|ref|ZP_19773831.1| putrescine-binding periplasmic protein [Escherichia coli KTE235]
gi|432601390|ref|ZP_19837639.1| putrescine-binding periplasmic protein [Escherichia coli KTE66]
gi|432630475|ref|ZP_19866419.1| putrescine-binding periplasmic protein [Escherichia coli KTE80]
gi|432640073|ref|ZP_19875913.1| putrescine-binding periplasmic protein [Escherichia coli KTE83]
gi|432665142|ref|ZP_19900728.1| putrescine-binding periplasmic protein [Escherichia coli KTE116]
gi|432679277|ref|ZP_19914676.1| putrescine-binding periplasmic protein [Escherichia coli KTE143]
gi|432717897|ref|ZP_19952892.1| putrescine-binding periplasmic protein [Escherichia coli KTE9]
gi|432769704|ref|ZP_20004057.1| putrescine-binding periplasmic protein [Escherichia coli KTE50]
gi|432774047|ref|ZP_20008333.1| putrescine-binding periplasmic protein [Escherichia coli KTE54]
gi|432838517|ref|ZP_20072006.1| putrescine-binding periplasmic protein [Escherichia coli KTE140]
gi|432849312|ref|ZP_20080534.1| putrescine-binding periplasmic protein [Escherichia coli KTE144]
gi|432860597|ref|ZP_20085736.1| putrescine-binding periplasmic protein [Escherichia coli KTE146]
gi|432873898|ref|ZP_20093166.1| putrescine-binding periplasmic protein [Escherichia coli KTE147]
gi|432885269|ref|ZP_20099864.1| putrescine-binding periplasmic protein [Escherichia coli KTE158]
gi|432911212|ref|ZP_20117693.1| putrescine-binding periplasmic protein [Escherichia coli KTE190]
gi|432960421|ref|ZP_20150552.1| putrescine-binding periplasmic protein [Escherichia coli KTE202]
gi|433017829|ref|ZP_20206090.1| putrescine-binding periplasmic protein [Escherichia coli KTE105]
gi|433052230|ref|ZP_20239456.1| putrescine-binding periplasmic protein [Escherichia coli KTE122]
gi|433062100|ref|ZP_20249057.1| putrescine-binding periplasmic protein [Escherichia coli KTE125]
gi|433067109|ref|ZP_20253934.1| putrescine-binding periplasmic protein [Escherichia coli KTE128]
gi|433157839|ref|ZP_20342704.1| putrescine-binding periplasmic protein [Escherichia coli KTE177]
gi|433177391|ref|ZP_20361841.1| putrescine-binding periplasmic protein [Escherichia coli KTE82]
gi|433202398|ref|ZP_20386195.1| putrescine-binding periplasmic protein [Escherichia coli KTE95]
gi|218431375|emb|CAR12253.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli UMN026]
gi|291428744|gb|EFF01769.1| putrescine transporter subunit protein [Escherichia coli FVEC1412]
gi|291469697|gb|EFF12181.1| hypothetical protein ECEG_00160 [Escherichia coli B354]
gi|298279639|gb|EFI21147.1| putrescine transporter [Escherichia coli FVEC1302]
gi|325496796|gb|EGC94655.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia fergusonii ECD227]
gi|327253641|gb|EGE65270.1| putrescine-binding periplasmic protein [Escherichia coli STEC_7v]
gi|331060688|gb|EGI32652.1| putrescine-binding periplasmic protein [Escherichia coli TA143]
gi|338771178|gb|EGP25926.1| Putrescine-binding periplasmic protein [Escherichia coli PCN033]
gi|345338947|gb|EGW71373.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_C165-02]
gi|371599786|gb|EHN88566.1| putrescine-binding periplasmic protein [Escherichia coli TA124]
gi|373246637|gb|EHP66089.1| putrescine-binding periplasmic protein [Escherichia coli 4_1_47FAA]
gi|386138274|gb|EIG79434.1| putrescine-binding periplasmic protein [Escherichia coli 1.2741]
gi|386158715|gb|EIH15048.1| putrescine-binding periplasmic protein [Escherichia coli 97.0259]
gi|388401680|gb|EIL62308.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 576-1]
gi|430877743|gb|ELC01177.1| putrescine-binding periplasmic protein [Escherichia coli KTE2]
gi|430927647|gb|ELC48210.1| putrescine-binding periplasmic protein [Escherichia coli KTE26]
gi|430958339|gb|ELC76933.1| putrescine-binding periplasmic protein [Escherichia coli KTE181]
gi|430991159|gb|ELD07575.1| putrescine-binding periplasmic protein [Escherichia coli KTE204]
gi|431008473|gb|ELD23274.1| putrescine-binding periplasmic protein [Escherichia coli KTE208]
gi|431023066|gb|ELD36323.1| putrescine-binding periplasmic protein [Escherichia coli KTE213]
gi|431044611|gb|ELD54883.1| putrescine-binding periplasmic protein [Escherichia coli KTE228]
gi|431072491|gb|ELD80242.1| putrescine-binding periplasmic protein [Escherichia coli KTE235]
gi|431143223|gb|ELE44961.1| putrescine-binding periplasmic protein [Escherichia coli KTE66]
gi|431173510|gb|ELE73586.1| putrescine-binding periplasmic protein [Escherichia coli KTE80]
gi|431184589|gb|ELE84346.1| putrescine-binding periplasmic protein [Escherichia coli KTE83]
gi|431203547|gb|ELF02204.1| putrescine-binding periplasmic protein [Escherichia coli KTE116]
gi|431224337|gb|ELF21564.1| putrescine-binding periplasmic protein [Escherichia coli KTE143]
gi|431265576|gb|ELF57140.1| putrescine-binding periplasmic protein [Escherichia coli KTE9]
gi|431317786|gb|ELG05562.1| putrescine-binding periplasmic protein [Escherichia coli KTE50]
gi|431320045|gb|ELG07697.1| putrescine-binding periplasmic protein [Escherichia coli KTE54]
gi|431390983|gb|ELG74631.1| putrescine-binding periplasmic protein [Escherichia coli KTE140]
gi|431401312|gb|ELG84656.1| putrescine-binding periplasmic protein [Escherichia coli KTE144]
gi|431404493|gb|ELG87744.1| putrescine-binding periplasmic protein [Escherichia coli KTE147]
gi|431407581|gb|ELG90792.1| putrescine-binding periplasmic protein [Escherichia coli KTE146]
gi|431419252|gb|ELH01610.1| putrescine-binding periplasmic protein [Escherichia coli KTE158]
gi|431443928|gb|ELH24953.1| putrescine-binding periplasmic protein [Escherichia coli KTE190]
gi|431478108|gb|ELH57867.1| putrescine-binding periplasmic protein [Escherichia coli KTE202]
gi|431536201|gb|ELI12532.1| putrescine-binding periplasmic protein [Escherichia coli KTE105]
gi|431575006|gb|ELI47763.1| putrescine-binding periplasmic protein [Escherichia coli KTE122]
gi|431587016|gb|ELI58398.1| putrescine-binding periplasmic protein [Escherichia coli KTE125]
gi|431589815|gb|ELI61021.1| putrescine-binding periplasmic protein [Escherichia coli KTE128]
gi|431681215|gb|ELJ47021.1| putrescine-binding periplasmic protein [Escherichia coli KTE177]
gi|431709300|gb|ELJ73770.1| putrescine-binding periplasmic protein [Escherichia coli KTE82]
gi|431725038|gb|ELJ88949.1| putrescine-binding periplasmic protein [Escherichia coli KTE95]
Length = 370
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|218553440|ref|YP_002386353.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli IAI1]
gi|417130876|ref|ZP_11976147.1| putrescine-binding periplasmic protein [Escherichia coli 5.0588]
gi|419806824|ref|ZP_14331914.1| bacterial extracellular solute-binding protein [Escherichia coli
AI27]
gi|419952129|ref|ZP_14468305.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CUMT8]
gi|432749336|ref|ZP_19983948.1| putrescine-binding periplasmic protein [Escherichia coli KTE29]
gi|432804981|ref|ZP_20038922.1| putrescine-binding periplasmic protein [Escherichia coli KTE91]
gi|432933420|ref|ZP_20133088.1| putrescine-binding periplasmic protein [Escherichia coli KTE184]
gi|432966952|ref|ZP_20155868.1| putrescine-binding periplasmic protein [Escherichia coli KTE203]
gi|433192847|ref|ZP_20376859.1| putrescine-binding periplasmic protein [Escherichia coli KTE90]
gi|218360208|emb|CAQ97758.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli IAI1]
gi|384470184|gb|EIE54305.1| bacterial extracellular solute-binding protein [Escherichia coli
AI27]
gi|386153984|gb|EIH05265.1| putrescine-binding periplasmic protein [Escherichia coli 5.0588]
gi|388413096|gb|EIL73112.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CUMT8]
gi|431298626|gb|ELF88250.1| putrescine-binding periplasmic protein [Escherichia coli KTE29]
gi|431356593|gb|ELG43283.1| putrescine-binding periplasmic protein [Escherichia coli KTE91]
gi|431455062|gb|ELH35418.1| putrescine-binding periplasmic protein [Escherichia coli KTE184]
gi|431472924|gb|ELH52758.1| putrescine-binding periplasmic protein [Escherichia coli KTE203]
gi|431720070|gb|ELJ84105.1| putrescine-binding periplasmic protein [Escherichia coli KTE90]
Length = 370
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|194433166|ref|ZP_03065448.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Shigella dysenteriae 1012]
gi|417672890|ref|ZP_12322349.1| putrescine-binding periplasmic protein [Shigella dysenteriae
155-74]
gi|194418663|gb|EDX34750.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Shigella dysenteriae 1012]
gi|332091100|gb|EGI96190.1| putrescine-binding periplasmic protein [Shigella dysenteriae
155-74]
Length = 370
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|16128822|ref|NP_415375.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
MG1655]
gi|82543342|ref|YP_407289.1| putrescine ABC transporter periplasmic-binding protein [Shigella
boydii Sb227]
gi|170080513|ref|YP_001729833.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli str. K-12 substr. DH10B]
gi|187731226|ref|YP_001880949.1| putrescine ABC transporter periplasmic-binding protein [Shigella
boydii CDC 3083-94]
gi|218694328|ref|YP_002401995.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli 55989]
gi|238900113|ref|YP_002925909.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli BW2952]
gi|293433152|ref|ZP_06661580.1| hypothetical protein ECCG_01277 [Escherichia coli B088]
gi|331667228|ref|ZP_08368093.1| putrescine-binding periplasmic protein [Escherichia coli TA271]
gi|386279901|ref|ZP_10057574.1| putrescine-binding periplasmic protein [Escherichia sp. 4_1_40B]
gi|386596310|ref|YP_006092710.1| extracellular solute-binding protein [Escherichia coli DH1]
gi|387620580|ref|YP_006128207.1| putrescine transporter subunit:periplasmic-binding component of ABC
superfamily [Escherichia coli DH1]
gi|388476939|ref|YP_489127.1| putrescine transporter subunit [Escherichia coli str. K-12 substr.
W3110]
gi|407468328|ref|YP_006785230.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2009EL-2071]
gi|407482940|ref|YP_006780089.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2011C-3493]
gi|410483492|ref|YP_006771038.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2009EL-2050]
gi|415812750|ref|ZP_11504845.1| putrescine-binding periplasmic protein [Escherichia coli LT-68]
gi|415827641|ref|ZP_11514466.1| putrescine-binding periplasmic protein [Escherichia coli OK1357]
gi|416267761|ref|ZP_11641934.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella dysenteriae CDC 74-1112]
gi|416304941|ref|ZP_11654096.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella flexneri CDC 796-83]
gi|416345141|ref|ZP_11678784.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli EC4100B]
gi|417224560|ref|ZP_12027851.1| putrescine-binding periplasmic protein [Escherichia coli 96.154]
gi|417241354|ref|ZP_12037300.1| putrescine-binding periplasmic protein [Escherichia coli 9.0111]
gi|417262034|ref|ZP_12049522.1| putrescine-binding periplasmic protein [Escherichia coli 2.3916]
gi|417268341|ref|ZP_12055702.1| putrescine-binding periplasmic protein [Escherichia coli 3.3884]
gi|417274279|ref|ZP_12061619.1| putrescine-binding periplasmic protein [Escherichia coli 2.4168]
gi|417277787|ref|ZP_12065108.1| putrescine-binding periplasmic protein [Escherichia coli 3.2303]
gi|417290075|ref|ZP_12077358.1| putrescine-binding periplasmic protein [Escherichia coli B41]
gi|417607078|ref|ZP_12257597.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_DG131-3]
gi|417611949|ref|ZP_12262421.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_EH250]
gi|417617293|ref|ZP_12267723.1| putrescine-binding periplasmic protein [Escherichia coli G58-1]
gi|417633487|ref|ZP_12283706.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_S1191]
gi|417681255|ref|ZP_12330633.1| putrescine-binding periplasmic protein [Shigella boydii 3594-74]
gi|417804235|ref|ZP_12451266.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. LB226692]
gi|417831986|ref|ZP_12478506.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. 01-09591]
gi|417864139|ref|ZP_12509186.1| potF [Escherichia coli O104:H4 str. C227-11]
gi|417943847|ref|ZP_12587093.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH140A]
gi|417975178|ref|ZP_12615978.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH001]
gi|418042980|ref|ZP_12681161.1| bacterial extracellular solute-binding protein [Escherichia coli
W26]
gi|418301780|ref|ZP_12913574.1| putrescine-binding periplasmic protein [Escherichia coli UMNF18]
gi|418958811|ref|ZP_13510721.1| bacterial extracellular solute-binding protein [Escherichia coli
J53]
gi|419141372|ref|ZP_13686126.1| putrescine-binding periplasmic protein [Escherichia coli DEC6A]
gi|419152772|ref|ZP_13697355.1| putrescine-binding periplasmic protein [Escherichia coli DEC6C]
gi|419158187|ref|ZP_13702704.1| putrescine-binding periplasmic protein [Escherichia coli DEC6D]
gi|419163121|ref|ZP_13707597.1| potF [Escherichia coli DEC6E]
gi|419174361|ref|ZP_13718213.1| potF [Escherichia coli DEC7B]
gi|419277125|ref|ZP_13819386.1| potF [Escherichia coli DEC10E]
gi|419344479|ref|ZP_13885861.1| potF [Escherichia coli DEC13A]
gi|419348918|ref|ZP_13890271.1| potF [Escherichia coli DEC13B]
gi|419353906|ref|ZP_13895188.1| potF [Escherichia coli DEC13C]
gi|419359301|ref|ZP_13900526.1| potF [Escherichia coli DEC13D]
gi|419364270|ref|ZP_13905448.1| potF [Escherichia coli DEC13E]
gi|419374613|ref|ZP_13915661.1| potF [Escherichia coli DEC14B]
gi|419379848|ref|ZP_13920820.1| potF [Escherichia coli DEC14C]
gi|419385250|ref|ZP_13926138.1| potF [Escherichia coli DEC14D]
gi|419390310|ref|ZP_13931144.1| potF [Escherichia coli DEC15A]
gi|419400824|ref|ZP_13941555.1| potF [Escherichia coli DEC15C]
gi|419406035|ref|ZP_13946734.1| potF [Escherichia coli DEC15D]
gi|419411498|ref|ZP_13952166.1| potF [Escherichia coli DEC15E]
gi|419809532|ref|ZP_14334417.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O32:H37 str. P4]
gi|419925739|ref|ZP_14443568.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-15]
gi|419940973|ref|ZP_14457687.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 75]
gi|420324628|ref|ZP_14826408.1| putrescine-binding periplasmic protein [Shigella flexneri CCH060]
gi|420353441|ref|ZP_14854558.1| putrescine-binding periplasmic protein [Shigella boydii 4444-74]
gi|421681582|ref|ZP_16121408.1| potF [Shigella flexneri 1485-80]
gi|422819882|ref|ZP_16868092.1| putrescine-binding periplasmic protein [Escherichia coli M919]
gi|422991589|ref|ZP_16982360.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C227-11]
gi|422993531|ref|ZP_16984295.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C236-11]
gi|422998742|ref|ZP_16989498.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 09-7901]
gi|423007203|ref|ZP_16997946.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 04-8351]
gi|423008849|ref|ZP_16999587.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-3677]
gi|423023037|ref|ZP_17013740.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4404]
gi|423028189|ref|ZP_17018882.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4522]
gi|423034023|ref|ZP_17024707.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4623]
gi|423036889|ref|ZP_17027563.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423042008|ref|ZP_17032675.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423048698|ref|ZP_17039355.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423052280|ref|ZP_17041088.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423059246|ref|ZP_17048042.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C5]
gi|423701702|ref|ZP_17676161.1| putrescine-binding periplasmic protein [Escherichia coli H730]
gi|423708776|ref|ZP_17683154.1| putrescine-binding periplasmic protein [Escherichia coli B799]
gi|425114214|ref|ZP_18516035.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0566]
gi|425118923|ref|ZP_18520645.1| putrescine-binding periplasmic protein [Escherichia coli 8.0569]
gi|425271605|ref|ZP_18663100.1| putrescine-binding periplasmic protein [Escherichia coli TW15901]
gi|425282258|ref|ZP_18673363.1| putrescine-binding periplasmic protein [Escherichia coli TW00353]
gi|429723080|ref|ZP_19257969.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9450]
gi|429775254|ref|ZP_19307252.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02030]
gi|429780443|ref|ZP_19312392.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02033-1]
gi|429784494|ref|ZP_19316403.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02092]
gi|429789831|ref|ZP_19321703.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02093]
gi|429796061|ref|ZP_19327884.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02281]
gi|429801986|ref|ZP_19333761.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02318]
gi|429805618|ref|ZP_19337362.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02913]
gi|429811214|ref|ZP_19342913.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03439]
gi|429816565|ref|ZP_19348221.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-04080]
gi|429821773|ref|ZP_19353385.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03943]
gi|429907442|ref|ZP_19373410.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9990]
gi|429911643|ref|ZP_19377599.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9941]
gi|429917478|ref|ZP_19383418.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4984]
gi|429922516|ref|ZP_19388437.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5604]
gi|429923369|ref|ZP_19389285.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4986]
gi|429932264|ref|ZP_19398158.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4987]
gi|429933866|ref|ZP_19399756.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4988]
gi|429939525|ref|ZP_19405399.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5603]
gi|429947167|ref|ZP_19413022.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-6006]
gi|429949799|ref|ZP_19415647.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0465]
gi|429958077|ref|ZP_19423906.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0466]
gi|432375966|ref|ZP_19618974.1| putrescine-binding periplasmic protein [Escherichia coli KTE12]
gi|432415841|ref|ZP_19658465.1| putrescine-binding periplasmic protein [Escherichia coli KTE44]
gi|432480228|ref|ZP_19722190.1| putrescine-binding periplasmic protein [Escherichia coli KTE210]
gi|432533080|ref|ZP_19770071.1| putrescine-binding periplasmic protein [Escherichia coli KTE234]
gi|432562836|ref|ZP_19799456.1| putrescine-binding periplasmic protein [Escherichia coli KTE51]
gi|432626460|ref|ZP_19862441.1| putrescine-binding periplasmic protein [Escherichia coli KTE77]
gi|432636127|ref|ZP_19872009.1| putrescine-binding periplasmic protein [Escherichia coli KTE81]
gi|432660081|ref|ZP_19895731.1| putrescine-binding periplasmic protein [Escherichia coli KTE111]
gi|432684658|ref|ZP_19919970.1| putrescine-binding periplasmic protein [Escherichia coli KTE156]
gi|432690779|ref|ZP_19926018.1| putrescine-binding periplasmic protein [Escherichia coli KTE161]
gi|432703423|ref|ZP_19938542.1| putrescine-binding periplasmic protein [Escherichia coli KTE171]
gi|432736354|ref|ZP_19971125.1| putrescine-binding periplasmic protein [Escherichia coli KTE42]
gi|432812956|ref|ZP_20046801.1| putrescine-binding periplasmic protein [Escherichia coli KTE101]
gi|432833936|ref|ZP_20067478.1| putrescine-binding periplasmic protein [Escherichia coli KTE136]
gi|432954154|ref|ZP_20146273.1| putrescine-binding periplasmic protein [Escherichia coli KTE197]
gi|433046991|ref|ZP_20234401.1| putrescine-binding periplasmic protein [Escherichia coli KTE120]
gi|442593231|ref|ZP_21011185.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|450240880|ref|ZP_21899436.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S17]
gi|2507606|sp|P31133.3|POTF_ECOLI RecName: Full=Putrescine-binding periplasmic protein; Flags:
Precursor
gi|1651387|dbj|BAA35565.1| putrescine transporter subunit [Escherichia coli str. K12 substr.
W3110]
gi|1787078|gb|AAC73941.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
MG1655]
gi|81244753|gb|ABB65461.1| periplasmic putrescine-binding protein [Shigella boydii Sb227]
gi|169888348|gb|ACB02055.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
DH10B]
gi|187428218|gb|ACD07492.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Shigella boydii CDC 3083-94]
gi|218351060|emb|CAU96764.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 55989]
gi|238863342|gb|ACR65340.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli BW2952]
gi|260449999|gb|ACX40421.1| extracellular solute-binding protein family 1 [Escherichia coli
DH1]
gi|291323971|gb|EFE63393.1| hypothetical protein ECCG_01277 [Escherichia coli B088]
gi|315135503|dbj|BAJ42662.1| putrescine transporter subunit:periplasmic-binding component of ABC
superfamily [Escherichia coli DH1]
gi|320175294|gb|EFW50400.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella dysenteriae CDC 74-1112]
gi|320183206|gb|EFW58064.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella flexneri CDC 796-83]
gi|320199089|gb|EFW73686.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli EC4100B]
gi|323172180|gb|EFZ57818.1| putrescine-binding periplasmic protein [Escherichia coli LT-68]
gi|323185182|gb|EFZ70547.1| putrescine-binding periplasmic protein [Escherichia coli OK1357]
gi|331065584|gb|EGI37477.1| putrescine-binding periplasmic protein [Escherichia coli TA271]
gi|332097188|gb|EGJ02171.1| putrescine-binding periplasmic protein [Shigella boydii 3594-74]
gi|339413878|gb|AEJ55550.1| putrescine-binding periplasmic protein [Escherichia coli UMNF18]
gi|340735276|gb|EGR64334.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. 01-09591]
gi|340741099|gb|EGR75249.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. LB226692]
gi|341917428|gb|EGT67044.1| potF [Escherichia coli O104:H4 str. C227-11]
gi|342364333|gb|EGU28434.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH140A]
gi|344195169|gb|EGV49239.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH001]
gi|345363669|gb|EGW95810.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_DG131-3]
gi|345365298|gb|EGW97407.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_EH250]
gi|345380465|gb|EGX12364.1| putrescine-binding periplasmic protein [Escherichia coli G58-1]
gi|345390201|gb|EGX20000.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_S1191]
gi|354856591|gb|EHF17049.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 04-8351]
gi|354857838|gb|EHF18291.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C227-11]
gi|354864606|gb|EHF25035.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C236-11]
gi|354874919|gb|EHF35285.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 09-7901]
gi|354878879|gb|EHF39226.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4404]
gi|354882671|gb|EHF42993.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-3677]
gi|354884293|gb|EHF44606.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4522]
gi|354887350|gb|EHF47625.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4623]
gi|354900545|gb|EHF60679.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354903690|gb|EHF63790.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354906053|gb|EHF66135.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354916970|gb|EHF76940.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C5]
gi|354921031|gb|EHF80956.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C4]
gi|359331546|dbj|BAL37993.1| putrescine transporter subunit [Escherichia coli str. K-12 substr.
MDS42]
gi|377998987|gb|EHV62074.1| putrescine-binding periplasmic protein [Escherichia coli DEC6A]
gi|378002122|gb|EHV65175.1| putrescine-binding periplasmic protein [Escherichia coli DEC6C]
gi|378012276|gb|EHV75208.1| putrescine-binding periplasmic protein [Escherichia coli DEC6D]
gi|378015823|gb|EHV78714.1| potF [Escherichia coli DEC6E]
gi|378036704|gb|EHV99243.1| potF [Escherichia coli DEC7B]
gi|378132294|gb|EHW93646.1| potF [Escherichia coli DEC10E]
gi|378188907|gb|EHX49501.1| potF [Escherichia coli DEC13A]
gi|378204580|gb|EHX64996.1| potF [Escherichia coli DEC13B]
gi|378206760|gb|EHX67162.1| potF [Escherichia coli DEC13D]
gi|378207878|gb|EHX68266.1| potF [Escherichia coli DEC13C]
gi|378217725|gb|EHX78001.1| potF [Escherichia coli DEC13E]
gi|378223981|gb|EHX84189.1| potF [Escherichia coli DEC14B]
gi|378232035|gb|EHX92138.1| potF [Escherichia coli DEC14C]
gi|378234699|gb|EHX94775.1| potF [Escherichia coli DEC14D]
gi|378242613|gb|EHY02565.1| potF [Escherichia coli DEC15A]
gi|378251129|gb|EHY11030.1| potF [Escherichia coli DEC15C]
gi|378256876|gb|EHY16721.1| potF [Escherichia coli DEC15D]
gi|378260718|gb|EHY20518.1| potF [Escherichia coli DEC15E]
gi|383474083|gb|EID66081.1| bacterial extracellular solute-binding protein [Escherichia coli
W26]
gi|384378552|gb|EIE36433.1| bacterial extracellular solute-binding protein [Escherichia coli
J53]
gi|385157713|gb|EIF19704.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O32:H37 str. P4]
gi|385536497|gb|EIF83390.1| putrescine-binding periplasmic protein [Escherichia coli M919]
gi|385707497|gb|EIG44528.1| putrescine-binding periplasmic protein [Escherichia coli B799]
gi|385711690|gb|EIG48647.1| putrescine-binding periplasmic protein [Escherichia coli H730]
gi|386122970|gb|EIG71574.1| putrescine-binding periplasmic protein [Escherichia sp. 4_1_40B]
gi|386199608|gb|EIH98599.1| putrescine-binding periplasmic protein [Escherichia coli 96.154]
gi|386212035|gb|EII22484.1| putrescine-binding periplasmic protein [Escherichia coli 9.0111]
gi|386225161|gb|EII47496.1| putrescine-binding periplasmic protein [Escherichia coli 2.3916]
gi|386230699|gb|EII58054.1| putrescine-binding periplasmic protein [Escherichia coli 3.3884]
gi|386232707|gb|EII64692.1| putrescine-binding periplasmic protein [Escherichia coli 2.4168]
gi|386239474|gb|EII76403.1| putrescine-binding periplasmic protein [Escherichia coli 3.2303]
gi|386256113|gb|EIJ05801.1| putrescine-binding periplasmic protein [Escherichia coli B41]
gi|388385634|gb|EIL47309.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-15]
gi|388401822|gb|EIL62435.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 75]
gi|391255716|gb|EIQ14857.1| putrescine-binding periplasmic protein [Shigella flexneri CCH060]
gi|391278930|gb|EIQ37626.1| putrescine-binding periplasmic protein [Shigella boydii 4444-74]
gi|404341533|gb|EJZ67939.1| potF [Shigella flexneri 1485-80]
gi|406778654|gb|AFS58078.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055237|gb|AFS75288.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2011C-3493]
gi|407064363|gb|AFS85410.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408197064|gb|EKI22335.1| putrescine-binding periplasmic protein [Escherichia coli TW15901]
gi|408205387|gb|EKI30275.1| putrescine-binding periplasmic protein [Escherichia coli TW00353]
gi|408571926|gb|EKK47853.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0566]
gi|408572938|gb|EKK48819.1| putrescine-binding periplasmic protein [Escherichia coli 8.0569]
gi|429349989|gb|EKY86724.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02030]
gi|429350701|gb|EKY87426.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02033-1]
gi|429351079|gb|EKY87800.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02092]
gi|429365357|gb|EKZ01970.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02093]
gi|429366308|gb|EKZ02911.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02281]
gi|429368871|gb|EKZ05454.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02318]
gi|429381278|gb|EKZ17765.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02913]
gi|429382246|gb|EKZ18711.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03439]
gi|429383681|gb|EKZ20140.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03943]
gi|429395512|gb|EKZ31878.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-04080]
gi|429396726|gb|EKZ33074.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9450]
gi|429397604|gb|EKZ33950.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9990]
gi|429409332|gb|EKZ45562.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4984]
gi|429417792|gb|EKZ53939.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4987]
gi|429421461|gb|EKZ57582.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4988]
gi|429423201|gb|EKZ59309.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4986]
gi|429427203|gb|EKZ63288.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5603]
gi|429434085|gb|EKZ70114.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5604]
gi|429438072|gb|EKZ74066.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0465]
gi|429443428|gb|EKZ79380.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-6006]
gi|429449531|gb|EKZ85430.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0466]
gi|429455407|gb|EKZ91263.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9941]
gi|430900594|gb|ELC22612.1| putrescine-binding periplasmic protein [Escherichia coli KTE12]
gi|430942386|gb|ELC62519.1| putrescine-binding periplasmic protein [Escherichia coli KTE44]
gi|431009710|gb|ELD24324.1| putrescine-binding periplasmic protein [Escherichia coli KTE210]
gi|431062801|gb|ELD72061.1| putrescine-binding periplasmic protein [Escherichia coli KTE234]
gi|431097397|gb|ELE02725.1| putrescine-binding periplasmic protein [Escherichia coli KTE51]
gi|431164408|gb|ELE64799.1| putrescine-binding periplasmic protein [Escherichia coli KTE77]
gi|431173021|gb|ELE73102.1| putrescine-binding periplasmic protein [Escherichia coli KTE81]
gi|431201953|gb|ELF00649.1| putrescine-binding periplasmic protein [Escherichia coli KTE111]
gi|431224165|gb|ELF21394.1| putrescine-binding periplasmic protein [Escherichia coli KTE156]
gi|431229165|gb|ELF25817.1| putrescine-binding periplasmic protein [Escherichia coli KTE161]
gi|431245988|gb|ELF40266.1| putrescine-binding periplasmic protein [Escherichia coli KTE171]
gi|431285894|gb|ELF76729.1| putrescine-binding periplasmic protein [Escherichia coli KTE42]
gi|431356162|gb|ELG42853.1| putrescine-binding periplasmic protein [Escherichia coli KTE101]
gi|431386817|gb|ELG70770.1| putrescine-binding periplasmic protein [Escherichia coli KTE136]
gi|431469452|gb|ELH49381.1| putrescine-binding periplasmic protein [Escherichia coli KTE197]
gi|431571099|gb|ELI44006.1| putrescine-binding periplasmic protein [Escherichia coli KTE120]
gi|441606984|emb|CCP96512.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|449324103|gb|EMD14041.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S17]
Length = 370
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|359299977|ref|ZP_09185816.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus [parainfluenzae] CCUG 13788]
gi|402305490|ref|ZP_10824549.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sputorum HK 2154]
gi|400376603|gb|EJP29490.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sputorum HK 2154]
Length = 359
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 18/127 (14%)
Query: 39 VAVG--WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISID 96
V+VG W+ V A K + + +V PK G LW D AIPA S+ + + + +S
Sbjct: 234 VSVGQLWNGSVRIAKKEKAPIDMVFPKEGPVLWVDTLAIPANSKNKENAHKLINYLLSAS 293
Query: 97 PSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEF 156
S KQ + P++ L +LP+E+ + P++ P AEIL + +
Sbjct: 294 VS--------KQLTLEIGYPTSNVKALEELPKEITQ-DPAI-------YPTAEILQKSHW 337
Query: 157 LEPLSEA 163
+ + +A
Sbjct: 338 QDDVGDA 344
>gi|344341161|ref|ZP_08772083.1| extracellular solute-binding protein family 1 [Thiocapsa marina
5811]
gi|343799041|gb|EGV16993.1| extracellular solute-binding protein family 1 [Thiocapsa marina
5811]
Length = 367
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASLWADLWAIP 76
D+ VA+G+S DV A R + V+P+ GA++W D+ AIP
Sbjct: 234 DLCVAMGYSGDVFQAQSRAEEAGKGVVIDYVIPREGAAVWTDVMAIP 280
>gi|260867027|ref|YP_003233429.1| putrescine transporter subunit PotF [Escherichia coli O111:H- str.
11128]
gi|415824741|ref|ZP_11512975.1| putrescine-binding periplasmic protein [Escherichia coli OK1180]
gi|417192859|ref|ZP_12014706.1| putrescine-binding periplasmic protein [Escherichia coli 4.0522]
gi|417590576|ref|ZP_12241291.1| putrescine-binding periplasmic protein [Escherichia coli 2534-86]
gi|419195972|ref|ZP_13739376.1| putrescine-binding periplasmic protein [Escherichia coli DEC8A]
gi|419891682|ref|ZP_14411727.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9570]
gi|419894607|ref|ZP_14414503.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9574]
gi|420088758|ref|ZP_14600618.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9602]
gi|420098068|ref|ZP_14609349.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9634]
gi|424769414|ref|ZP_18196641.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str.
CFSAN001632]
gi|257763383|dbj|BAI34878.1| putrescine transporter subunit PotF [Escherichia coli O111:H- str.
11128]
gi|323175524|gb|EFZ61119.1| putrescine-binding periplasmic protein [Escherichia coli OK1180]
gi|345344522|gb|EGW76889.1| putrescine-binding periplasmic protein [Escherichia coli 2534-86]
gi|378051780|gb|EHW14095.1| putrescine-binding periplasmic protein [Escherichia coli DEC8A]
gi|386190040|gb|EIH78788.1| putrescine-binding periplasmic protein [Escherichia coli 4.0522]
gi|388349030|gb|EIL14580.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9570]
gi|388363444|gb|EIL27373.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9574]
gi|394382247|gb|EJE59894.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9634]
gi|394389548|gb|EJE66690.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9602]
gi|421944063|gb|EKU01325.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str.
CFSAN001632]
Length = 370
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|110641056|ref|YP_668786.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli 536]
gi|191172122|ref|ZP_03033666.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|191173739|ref|ZP_03035262.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|215485985|ref|YP_002328416.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O127:H6 str. E2348/69]
gi|218557758|ref|YP_002390671.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli S88]
gi|218688637|ref|YP_002396849.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli ED1a]
gi|306812697|ref|ZP_07446890.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli NC101]
gi|312969079|ref|ZP_07783286.1| putrescine-binding periplasmic protein [Escherichia coli 2362-75]
gi|331656926|ref|ZP_08357888.1| putrescine-binding periplasmic protein [Escherichia coli TA206]
gi|386598572|ref|YP_006100078.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Escherichia coli IHE3034]
gi|386605253|ref|YP_006111553.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli UM146]
gi|387828832|ref|YP_003348769.1| putrescine ABC transporter substrate binding component [Escherichia
coli SE15]
gi|416335114|ref|ZP_11671825.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli WV_060327]
gi|417083350|ref|ZP_11951445.1| putrescine ABC transporter periplasmic substrate-binding protein
[Escherichia coli cloneA_i1]
gi|417288918|ref|ZP_12076203.1| putrescine-binding periplasmic protein [Escherichia coli TW07793]
gi|417661418|ref|ZP_12310999.1| putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli AA86]
gi|417754753|ref|ZP_12402844.1| potF [Escherichia coli DEC2B]
gi|418996071|ref|ZP_13543678.1| potF [Escherichia coli DEC1A]
gi|419001120|ref|ZP_13548671.1| potF [Escherichia coli DEC1B]
gi|419006610|ref|ZP_13554063.1| potF [Escherichia coli DEC1C]
gi|419012454|ref|ZP_13559818.1| putrescine-binding periplasmic protein [Escherichia coli DEC1D]
gi|419017452|ref|ZP_13564771.1| potF [Escherichia coli DEC1E]
gi|419023044|ref|ZP_13570285.1| putrescine-binding periplasmic protein [Escherichia coli DEC2A]
gi|419027912|ref|ZP_13575104.1| potF [Escherichia coli DEC2C]
gi|419033667|ref|ZP_13580763.1| potF [Escherichia coli DEC2D]
gi|419038720|ref|ZP_13585773.1| potF [Escherichia coli DEC2E]
gi|419699706|ref|ZP_14227318.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SCI-07]
gi|419911703|ref|ZP_14430172.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD1]
gi|422748099|ref|ZP_16802012.1| extracellular solute-binding protein [Escherichia coli H252]
gi|422753460|ref|ZP_16807287.1| extracellular solute-binding protein [Escherichia coli H263]
gi|422839317|ref|ZP_16887289.1| putrescine-binding periplasmic protein [Escherichia coli H397]
gi|425299119|ref|ZP_18689161.1| putrescine-binding periplasmic protein [Escherichia coli 07798]
gi|432357183|ref|ZP_19600427.1| putrescine-binding periplasmic protein [Escherichia coli KTE4]
gi|432361610|ref|ZP_19604794.1| putrescine-binding periplasmic protein [Escherichia coli KTE5]
gi|432380477|ref|ZP_19623432.1| putrescine-binding periplasmic protein [Escherichia coli KTE15]
gi|432386304|ref|ZP_19629200.1| putrescine-binding periplasmic protein [Escherichia coli KTE16]
gi|432396738|ref|ZP_19639523.1| putrescine-binding periplasmic protein [Escherichia coli KTE25]
gi|432405670|ref|ZP_19648390.1| putrescine-binding periplasmic protein [Escherichia coli KTE28]
gi|432440215|ref|ZP_19682567.1| putrescine-binding periplasmic protein [Escherichia coli KTE189]
gi|432445345|ref|ZP_19687651.1| putrescine-binding periplasmic protein [Escherichia coli KTE191]
gi|432470222|ref|ZP_19712274.1| putrescine-binding periplasmic protein [Escherichia coli KTE206]
gi|432499066|ref|ZP_19740842.1| putrescine-binding periplasmic protein [Escherichia coli KTE216]
gi|432513092|ref|ZP_19750327.1| putrescine-binding periplasmic protein [Escherichia coli KTE224]
gi|432572832|ref|ZP_19809322.1| putrescine-binding periplasmic protein [Escherichia coli KTE55]
gi|432587092|ref|ZP_19823462.1| putrescine-binding periplasmic protein [Escherichia coli KTE58]
gi|432596733|ref|ZP_19833014.1| putrescine-binding periplasmic protein [Escherichia coli KTE62]
gi|432610523|ref|ZP_19846694.1| putrescine-binding periplasmic protein [Escherichia coli KTE72]
gi|432645281|ref|ZP_19881080.1| putrescine-binding periplasmic protein [Escherichia coli KTE86]
gi|432655119|ref|ZP_19890831.1| putrescine-binding periplasmic protein [Escherichia coli KTE93]
gi|432693606|ref|ZP_19928817.1| putrescine-binding periplasmic protein [Escherichia coli KTE162]
gi|432698204|ref|ZP_19933370.1| putrescine-binding periplasmic protein [Escherichia coli KTE169]
gi|432712512|ref|ZP_19947561.1| putrescine-binding periplasmic protein [Escherichia coli KTE8]
gi|432722365|ref|ZP_19957288.1| putrescine-binding periplasmic protein [Escherichia coli KTE17]
gi|432726953|ref|ZP_19961834.1| putrescine-binding periplasmic protein [Escherichia coli KTE18]
gi|432731563|ref|ZP_19966399.1| putrescine-binding periplasmic protein [Escherichia coli KTE45]
gi|432740639|ref|ZP_19975360.1| putrescine-binding periplasmic protein [Escherichia coli KTE23]
gi|432744824|ref|ZP_19979523.1| putrescine-binding periplasmic protein [Escherichia coli KTE43]
gi|432753591|ref|ZP_19988157.1| putrescine-binding periplasmic protein [Escherichia coli KTE22]
gi|432758641|ref|ZP_19993141.1| putrescine-binding periplasmic protein [Escherichia coli KTE46]
gi|432777731|ref|ZP_20011981.1| putrescine-binding periplasmic protein [Escherichia coli KTE59]
gi|432786519|ref|ZP_20020684.1| putrescine-binding periplasmic protein [Escherichia coli KTE65]
gi|432820111|ref|ZP_20053824.1| putrescine-binding periplasmic protein [Escherichia coli KTE118]
gi|432826327|ref|ZP_20059982.1| putrescine-binding periplasmic protein [Escherichia coli KTE123]
gi|432893590|ref|ZP_20105602.1| putrescine-binding periplasmic protein [Escherichia coli KTE165]
gi|432897785|ref|ZP_20108616.1| putrescine-binding periplasmic protein [Escherichia coli KTE192]
gi|432903437|ref|ZP_20112903.1| putrescine-binding periplasmic protein [Escherichia coli KTE194]
gi|432918076|ref|ZP_20122481.1| putrescine-binding periplasmic protein [Escherichia coli KTE173]
gi|432925366|ref|ZP_20127395.1| putrescine-binding periplasmic protein [Escherichia coli KTE175]
gi|432942903|ref|ZP_20140057.1| putrescine-binding periplasmic protein [Escherichia coli KTE183]
gi|432971009|ref|ZP_20159887.1| putrescine-binding periplasmic protein [Escherichia coli KTE207]
gi|432980327|ref|ZP_20169105.1| putrescine-binding periplasmic protein [Escherichia coli KTE211]
gi|432984481|ref|ZP_20173218.1| putrescine-binding periplasmic protein [Escherichia coli KTE215]
gi|432989952|ref|ZP_20178618.1| putrescine-binding periplasmic protein [Escherichia coli KTE217]
gi|433004319|ref|ZP_20192757.1| putrescine-binding periplasmic protein [Escherichia coli KTE227]
gi|433011574|ref|ZP_20199978.1| putrescine-binding periplasmic protein [Escherichia coli KTE229]
gi|433013071|ref|ZP_20201446.1| putrescine-binding periplasmic protein [Escherichia coli KTE104]
gi|433022713|ref|ZP_20210725.1| putrescine-binding periplasmic protein [Escherichia coli KTE106]
gi|433027879|ref|ZP_20215751.1| putrescine-binding periplasmic protein [Escherichia coli KTE109]
gi|433037892|ref|ZP_20225504.1| putrescine-binding periplasmic protein [Escherichia coli KTE113]
gi|433077013|ref|ZP_20263575.1| putrescine-binding periplasmic protein [Escherichia coli KTE131]
gi|433081779|ref|ZP_20268253.1| putrescine-binding periplasmic protein [Escherichia coli KTE133]
gi|433095749|ref|ZP_20281960.1| putrescine-binding periplasmic protein [Escherichia coli KTE139]
gi|433100363|ref|ZP_20286470.1| putrescine-binding periplasmic protein [Escherichia coli KTE145]
gi|433104959|ref|ZP_20290977.1| putrescine-binding periplasmic protein [Escherichia coli KTE148]
gi|433110174|ref|ZP_20296048.1| putrescine-binding periplasmic protein [Escherichia coli KTE150]
gi|433143474|ref|ZP_20328640.1| putrescine-binding periplasmic protein [Escherichia coli KTE168]
gi|433152944|ref|ZP_20337910.1| putrescine-binding periplasmic protein [Escherichia coli KTE176]
gi|433162689|ref|ZP_20347448.1| putrescine-binding periplasmic protein [Escherichia coli KTE179]
gi|433167698|ref|ZP_20352364.1| putrescine-binding periplasmic protein [Escherichia coli KTE180]
gi|433187638|ref|ZP_20371755.1| putrescine-binding periplasmic protein [Escherichia coli KTE88]
gi|433197462|ref|ZP_20381383.1| putrescine-binding periplasmic protein [Escherichia coli KTE94]
gi|433322318|ref|ZP_20399788.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli J96]
gi|110342648|gb|ABG68885.1| putrescine-binding periplasmic protein precursor [Escherichia coli
536]
gi|190905989|gb|EDV65605.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|190907649|gb|EDV67244.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|215264057|emb|CAS08399.1| putrescine transporter subunit PotF: periplasmic-binding component
of ABC superfamily [Escherichia coli O127:H6 str.
E2348/69]
gi|218364527|emb|CAR02209.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S88]
gi|218426201|emb|CAR07023.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli ED1a]
gi|281177989|dbj|BAI54319.1| putrescine ABC transporter substrate binding component [Escherichia
coli SE15]
gi|294491889|gb|ADE90645.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli IHE3034]
gi|305853460|gb|EFM53899.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli NC101]
gi|307627737|gb|ADN72041.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli UM146]
gi|312286481|gb|EFR14394.1| putrescine-binding periplasmic protein [Escherichia coli 2362-75]
gi|320196651|gb|EFW71274.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli WV_060327]
gi|323953442|gb|EGB49308.1| extracellular solute-binding protein [Escherichia coli H252]
gi|323958143|gb|EGB53852.1| extracellular solute-binding protein [Escherichia coli H263]
gi|330910636|gb|EGH39146.1| putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli AA86]
gi|331055174|gb|EGI27183.1| putrescine-binding periplasmic protein [Escherichia coli TA206]
gi|355352766|gb|EHG01940.1| putrescine ABC transporter periplasmic substrate-binding protein
[Escherichia coli cloneA_i1]
gi|371609849|gb|EHN98382.1| putrescine-binding periplasmic protein [Escherichia coli H397]
gi|377848061|gb|EHU13058.1| potF [Escherichia coli DEC1A]
gi|377849686|gb|EHU14655.1| potF [Escherichia coli DEC1C]
gi|377852468|gb|EHU17387.1| potF [Escherichia coli DEC1B]
gi|377862077|gb|EHU26891.1| putrescine-binding periplasmic protein [Escherichia coli DEC1D]
gi|377865908|gb|EHU30698.1| potF [Escherichia coli DEC1E]
gi|377868054|gb|EHU32803.1| putrescine-binding periplasmic protein [Escherichia coli DEC2A]
gi|377878196|gb|EHU42784.1| potF [Escherichia coli DEC2B]
gi|377882844|gb|EHU47375.1| potF [Escherichia coli DEC2D]
gi|377884039|gb|EHU48556.1| potF [Escherichia coli DEC2C]
gi|377897181|gb|EHU61564.1| potF [Escherichia coli DEC2E]
gi|380348812|gb|EIA37088.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SCI-07]
gi|386247710|gb|EII93883.1| putrescine-binding periplasmic protein [Escherichia coli TW07793]
gi|388393013|gb|EIL54407.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD1]
gi|408221062|gb|EKI45045.1| putrescine-binding periplasmic protein [Escherichia coli 07798]
gi|430879049|gb|ELC02406.1| putrescine-binding periplasmic protein [Escherichia coli KTE4]
gi|430889500|gb|ELC12161.1| putrescine-binding periplasmic protein [Escherichia coli KTE5]
gi|430909225|gb|ELC30610.1| putrescine-binding periplasmic protein [Escherichia coli KTE16]
gi|430910792|gb|ELC32092.1| putrescine-binding periplasmic protein [Escherichia coli KTE15]
gi|430917058|gb|ELC38106.1| putrescine-binding periplasmic protein [Escherichia coli KTE25]
gi|430931824|gb|ELC52258.1| putrescine-binding periplasmic protein [Escherichia coli KTE28]
gi|430968941|gb|ELC86109.1| putrescine-binding periplasmic protein [Escherichia coli KTE189]
gi|430975187|gb|ELC92089.1| putrescine-binding periplasmic protein [Escherichia coli KTE191]
gi|430999400|gb|ELD15482.1| putrescine-binding periplasmic protein [Escherichia coli KTE206]
gi|431031737|gb|ELD44475.1| putrescine-binding periplasmic protein [Escherichia coli KTE216]
gi|431044131|gb|ELD54411.1| putrescine-binding periplasmic protein [Escherichia coli KTE224]
gi|431110040|gb|ELE13967.1| putrescine-binding periplasmic protein [Escherichia coli KTE55]
gi|431123259|gb|ELE26001.1| putrescine-binding periplasmic protein [Escherichia coli KTE58]
gi|431132518|gb|ELE34517.1| putrescine-binding periplasmic protein [Escherichia coli KTE62]
gi|431150864|gb|ELE51906.1| putrescine-binding periplasmic protein [Escherichia coli KTE72]
gi|431182512|gb|ELE82329.1| putrescine-binding periplasmic protein [Escherichia coli KTE86]
gi|431194029|gb|ELE93299.1| putrescine-binding periplasmic protein [Escherichia coli KTE93]
gi|431236272|gb|ELF31485.1| putrescine-binding periplasmic protein [Escherichia coli KTE162]
gi|431246344|gb|ELF40610.1| putrescine-binding periplasmic protein [Escherichia coli KTE169]
gi|431258645|gb|ELF51408.1| putrescine-binding periplasmic protein [Escherichia coli KTE8]
gi|431267442|gb|ELF58959.1| putrescine-binding periplasmic protein [Escherichia coli KTE17]
gi|431274741|gb|ELF65786.1| putrescine-binding periplasmic protein [Escherichia coli KTE18]
gi|431277818|gb|ELF68822.1| putrescine-binding periplasmic protein [Escherichia coli KTE45]
gi|431285230|gb|ELF76066.1| putrescine-binding periplasmic protein [Escherichia coli KTE23]
gi|431294300|gb|ELF84480.1| putrescine-binding periplasmic protein [Escherichia coli KTE43]
gi|431304827|gb|ELF93351.1| putrescine-binding periplasmic protein [Escherichia coli KTE22]
gi|431310580|gb|ELF98761.1| putrescine-binding periplasmic protein [Escherichia coli KTE46]
gi|431329920|gb|ELG17205.1| putrescine-binding periplasmic protein [Escherichia coli KTE59]
gi|431341155|gb|ELG28169.1| putrescine-binding periplasmic protein [Escherichia coli KTE65]
gi|431370367|gb|ELG56168.1| putrescine-binding periplasmic protein [Escherichia coli KTE118]
gi|431374111|gb|ELG59706.1| putrescine-binding periplasmic protein [Escherichia coli KTE123]
gi|431424570|gb|ELH06666.1| putrescine-binding periplasmic protein [Escherichia coli KTE165]
gi|431428512|gb|ELH10453.1| putrescine-binding periplasmic protein [Escherichia coli KTE192]
gi|431435881|gb|ELH17489.1| putrescine-binding periplasmic protein [Escherichia coli KTE194]
gi|431446257|gb|ELH27006.1| putrescine-binding periplasmic protein [Escherichia coli KTE173]
gi|431448087|gb|ELH28805.1| putrescine-binding periplasmic protein [Escherichia coli KTE175]
gi|431452790|gb|ELH33201.1| putrescine-binding periplasmic protein [Escherichia coli KTE183]
gi|431486146|gb|ELH65803.1| putrescine-binding periplasmic protein [Escherichia coli KTE207]
gi|431493222|gb|ELH72816.1| putrescine-binding periplasmic protein [Escherichia coli KTE211]
gi|431496827|gb|ELH76405.1| putrescine-binding periplasmic protein [Escherichia coli KTE217]
gi|431505060|gb|ELH83683.1| putrescine-binding periplasmic protein [Escherichia coli KTE215]
gi|431517640|gb|ELH95162.1| putrescine-binding periplasmic protein [Escherichia coli KTE227]
gi|431518189|gb|ELH95709.1| putrescine-binding periplasmic protein [Escherichia coli KTE229]
gi|431534519|gb|ELI11001.1| putrescine-binding periplasmic protein [Escherichia coli KTE104]
gi|431539450|gb|ELI15201.1| putrescine-binding periplasmic protein [Escherichia coli KTE106]
gi|431545260|gb|ELI19920.1| putrescine-binding periplasmic protein [Escherichia coli KTE109]
gi|431554062|gb|ELI27944.1| putrescine-binding periplasmic protein [Escherichia coli KTE113]
gi|431600291|gb|ELI69963.1| putrescine-binding periplasmic protein [Escherichia coli KTE131]
gi|431605614|gb|ELI75003.1| putrescine-binding periplasmic protein [Escherichia coli KTE133]
gi|431619007|gb|ELI87935.1| putrescine-binding periplasmic protein [Escherichia coli KTE139]
gi|431621820|gb|ELI90610.1| putrescine-binding periplasmic protein [Escherichia coli KTE145]
gi|431630810|gb|ELI99138.1| putrescine-binding periplasmic protein [Escherichia coli KTE150]
gi|431633715|gb|ELJ01978.1| putrescine-binding periplasmic protein [Escherichia coli KTE148]
gi|431665576|gb|ELJ32294.1| putrescine-binding periplasmic protein [Escherichia coli KTE168]
gi|431678037|gb|ELJ44049.1| putrescine-binding periplasmic protein [Escherichia coli KTE176]
gi|431691359|gb|ELJ56819.1| putrescine-binding periplasmic protein [Escherichia coli KTE179]
gi|431692960|gb|ELJ58381.1| putrescine-binding periplasmic protein [Escherichia coli KTE180]
gi|431708638|gb|ELJ73146.1| putrescine-binding periplasmic protein [Escherichia coli KTE88]
gi|431724536|gb|ELJ88453.1| putrescine-binding periplasmic protein [Escherichia coli KTE94]
gi|432349036|gb|ELL43477.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli J96]
Length = 370
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|157157062|ref|YP_001462051.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli E24377A]
gi|307311758|ref|ZP_07591398.1| extracellular solute-binding protein family 1 [Escherichia coli W]
gi|378713742|ref|YP_005278635.1| extracellular solute-binding protein [Escherichia coli KO11FL]
gi|386608222|ref|YP_006123708.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli W]
gi|386702331|ref|YP_006166168.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli KO11FL]
gi|386708666|ref|YP_006172387.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli W]
gi|417161332|ref|ZP_11997568.1| putrescine-binding periplasmic protein [Escherichia coli 99.0741]
gi|419369124|ref|ZP_13910250.1| putrescine-binding periplasmic protein [Escherichia coli DEC14A]
gi|419928713|ref|ZP_14446420.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-1]
gi|422959017|ref|ZP_16970948.1| putrescine-binding periplasmic protein [Escherichia coli H494]
gi|432764176|ref|ZP_19998624.1| putrescine-binding periplasmic protein [Escherichia coli KTE48]
gi|450212610|ref|ZP_21894582.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O08]
gi|157079092|gb|ABV18800.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E24377A]
gi|306908313|gb|EFN38812.1| extracellular solute-binding protein family 1 [Escherichia coli W]
gi|315060139|gb|ADT74466.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli W]
gi|323379303|gb|ADX51571.1| extracellular solute-binding protein family 1 [Escherichia coli
KO11FL]
gi|371595673|gb|EHN84521.1| putrescine-binding periplasmic protein [Escherichia coli H494]
gi|378220799|gb|EHX81050.1| putrescine-binding periplasmic protein [Escherichia coli DEC14A]
gi|383393858|gb|AFH18816.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KO11FL]
gi|383404358|gb|AFH10601.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli W]
gi|386173868|gb|EIH45869.1| putrescine-binding periplasmic protein [Escherichia coli 99.0741]
gi|388405079|gb|EIL65516.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-1]
gi|431312755|gb|ELG00744.1| putrescine-binding periplasmic protein [Escherichia coli KTE48]
gi|449321719|gb|EMD11729.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O08]
Length = 370
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|194428217|ref|ZP_03060760.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B171]
gi|415803209|ref|ZP_11500357.1| putrescine-binding periplasmic protein [Escherichia coli E128010]
gi|417622217|ref|ZP_12272541.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_H.1.8]
gi|419310481|ref|ZP_13852352.1| putrescine-binding periplasmic protein [Escherichia coli DEC11E]
gi|419315769|ref|ZP_13857593.1| putrescine-binding periplasmic protein [Escherichia coli DEC12A]
gi|419321715|ref|ZP_13863447.1| potF [Escherichia coli DEC12B]
gi|419327845|ref|ZP_13869473.1| putrescine-binding periplasmic protein [Escherichia coli DEC12C]
gi|419333369|ref|ZP_13874924.1| potF [Escherichia coli DEC12D]
gi|419338686|ref|ZP_13880171.1| potF [Escherichia coli DEC12E]
gi|194413777|gb|EDX30056.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B171]
gi|323159676|gb|EFZ45655.1| putrescine-binding periplasmic protein [Escherichia coli E128010]
gi|345385041|gb|EGX14891.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_H.1.8]
gi|378160196|gb|EHX21193.1| putrescine-binding periplasmic protein [Escherichia coli DEC11E]
gi|378173150|gb|EHX33994.1| potF [Escherichia coli DEC12B]
gi|378173861|gb|EHX34694.1| putrescine-binding periplasmic protein [Escherichia coli DEC12A]
gi|378175304|gb|EHX36122.1| putrescine-binding periplasmic protein [Escherichia coli DEC12C]
gi|378188605|gb|EHX49201.1| potF [Escherichia coli DEC12D]
gi|378193209|gb|EHX53750.1| potF [Escherichia coli DEC12E]
Length = 370
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|432801133|ref|ZP_20035118.1| putrescine-binding periplasmic protein [Escherichia coli KTE84]
gi|431350368|gb|ELG37180.1| putrescine-binding periplasmic protein [Escherichia coli KTE84]
Length = 370
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEGKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|432579551|ref|ZP_19815982.1| putrescine-binding periplasmic protein [Escherichia coli KTE56]
gi|431107541|gb|ELE11706.1| putrescine-binding periplasmic protein [Escherichia coli KTE56]
Length = 370
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|425304379|ref|ZP_18694159.1| putrescine-binding periplasmic protein [Escherichia coli N1]
gi|408231148|gb|EKI54444.1| putrescine-binding periplasmic protein [Escherichia coli N1]
Length = 370
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|418945897|ref|ZP_13498573.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Escherichia coli O157:H43 str.
T22]
gi|375318787|gb|EHS65157.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Escherichia coli O157:H43 str.
T22]
Length = 288
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 155 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 205
>gi|262041052|ref|ZP_06014271.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041610|gb|EEW42662.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 370
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 22/124 (17%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
D+ VA+GW+ DV R NV+ +PK GA + D++A+PA ++ ++
Sbjct: 237 DICVAIGWAGDVWQVANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFL 296
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAE 149
+ + D ++ +V A T LV E ++ P++ PPA+
Sbjct: 297 NYLMRPD-----VIAKISDQVFYANGNKA-STQLV---SETIRNNPAI-------YPPAD 340
Query: 150 ILAR 153
+ A+
Sbjct: 341 VFAK 344
>gi|193064481|ref|ZP_03045562.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E22]
gi|260843105|ref|YP_003220883.1| putrescine transporter subunit PotF [Escherichia coli O103:H2 str.
12009]
gi|417177493|ref|ZP_12006974.1| putrescine-binding periplasmic protein [Escherichia coli 3.2608]
gi|417180250|ref|ZP_12007958.1| putrescine-binding periplasmic protein [Escherichia coli 93.0624]
gi|192928943|gb|EDV82556.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E22]
gi|257758252|dbj|BAI29749.1| putrescine transporter subunit PotF [Escherichia coli O103:H2 str.
12009]
gi|386176042|gb|EIH53524.1| putrescine-binding periplasmic protein [Escherichia coli 3.2608]
gi|386185605|gb|EIH68331.1| putrescine-binding periplasmic protein [Escherichia coli 93.0624]
Length = 370
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|191166164|ref|ZP_03027998.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B7A]
gi|417595859|ref|ZP_12246518.1| putrescine-binding periplasmic protein [Escherichia coli 3030-1]
gi|190903773|gb|EDV63488.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B7A]
gi|345358605|gb|EGW90788.1| putrescine-binding periplasmic protein [Escherichia coli 3030-1]
Length = 370
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|420330059|ref|ZP_14831756.1| putrescine-binding periplasmic domain protein [Shigella flexneri
K-1770]
gi|391258105|gb|EIQ17211.1| putrescine-binding periplasmic domain protein [Shigella flexneri
K-1770]
Length = 289
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 156 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 206
>gi|417638181|ref|ZP_12288347.1| putrescine-binding periplasmic protein [Escherichia coli TX1999]
gi|419168841|ref|ZP_13713235.1| putrescine-binding periplasmic protein [Escherichia coli DEC7A]
gi|419179821|ref|ZP_13723444.1| potF [Escherichia coli DEC7C]
gi|419185382|ref|ZP_13728904.1| potF [Escherichia coli DEC7D]
gi|419190576|ref|ZP_13734043.1| putrescine-binding periplasmic protein [Escherichia coli DEC7E]
gi|419864881|ref|ZP_14387276.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H25 str. CVM9340]
gi|420384482|ref|ZP_14883866.1| putrescine-binding periplasmic protein [Escherichia coli EPECa12]
gi|427803967|ref|ZP_18971034.1| periplasmic putrescine-binding protein [Escherichia coli chi7122]
gi|427808553|ref|ZP_18975618.1| periplasmic putrescine-binding protein; permease protein
[Escherichia coli]
gi|433129206|ref|ZP_20314674.1| putrescine-binding periplasmic protein [Escherichia coli KTE163]
gi|433134030|ref|ZP_20319403.1| putrescine-binding periplasmic protein [Escherichia coli KTE166]
gi|443616928|ref|YP_007380784.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli APEC O78]
gi|345395035|gb|EGX24788.1| putrescine-binding periplasmic protein [Escherichia coli TX1999]
gi|378018059|gb|EHV80926.1| putrescine-binding periplasmic protein [Escherichia coli DEC7A]
gi|378027006|gb|EHV89638.1| potF [Escherichia coli DEC7C]
gi|378032800|gb|EHV95381.1| potF [Escherichia coli DEC7D]
gi|378041813|gb|EHW04271.1| putrescine-binding periplasmic protein [Escherichia coli DEC7E]
gi|388338572|gb|EIL05020.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H25 str. CVM9340]
gi|391308840|gb|EIQ66527.1| putrescine-binding periplasmic protein [Escherichia coli EPECa12]
gi|412962149|emb|CCK46063.1| periplasmic putrescine-binding protein [Escherichia coli chi7122]
gi|412968732|emb|CCJ43357.1| periplasmic putrescine-binding protein; permease protein
[Escherichia coli]
gi|431650784|gb|ELJ18095.1| putrescine-binding periplasmic protein [Escherichia coli KTE163]
gi|431661316|gb|ELJ28130.1| putrescine-binding periplasmic protein [Escherichia coli KTE166]
gi|443421436|gb|AGC86340.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli APEC O78]
Length = 370
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|302556323|ref|ZP_07308665.1| ABC transporter solute-binding protein [Streptomyces
viridochromogenes DSM 40736]
gi|302473941|gb|EFL37034.1| ABC transporter solute-binding protein [Streptomyces
viridochromogenes DSM 40736]
Length = 395
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTN 85
DV +S DV+ +V VVP++GA LWA+ IP +R HKTN
Sbjct: 262 DVLACQAYSGDVIQLQADDPDVEFVVPEAGAELWAESLMIPNLAR-HKTN 310
>gi|386704035|ref|YP_006167882.1| putrescine ABC transporter periplasmic-binding protein, partial
[Escherichia coli P12b]
gi|383102203|gb|AFG39712.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli P12b]
Length = 298
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 165 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 215
>gi|336410387|ref|ZP_08590867.1| hypothetical protein HMPREF1018_02884 [Bacteroides sp. 2_1_56FAA]
gi|335945443|gb|EGN07256.1| hypothetical protein HMPREF1018_02884 [Bacteroides sp. 2_1_56FAA]
Length = 191
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 18/139 (12%)
Query: 43 WSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASRLHKTNWRASQWSISIDPS 98
WS D A++ V V VVP+ G+++W D W IP + N A+ + I+
Sbjct: 3 WSGDAKWAIEEADAVGVDLDYVVPREGSNIWYDGWVIPK----YAGNPEAASYFINFMCR 58
Query: 99 MDRILLPFKQE--VIPGTSPSALE----TTLV---KLPEELLKGKPSLGTDLIAGVPPAE 149
D L + V SP +E TTL L G SL D I P +
Sbjct: 59 PDIALRNMEASGYVSAVASPEIMEAKTDTTLTYYSDLSYFFGPGADSLQIDKIQ-YPDRK 117
Query: 150 ILARCEFLEPLSEATFDVL 168
++ RC + + T DVL
Sbjct: 118 VVERCAMIRDFGDKTKDVL 136
>gi|386618312|ref|YP_006137892.1| Putrescine ABC transporter putrescine-binding protein [Escherichia
coli NA114]
gi|432420929|ref|ZP_19663484.1| putrescine-binding periplasmic protein [Escherichia coli KTE178]
gi|432557835|ref|ZP_19794524.1| putrescine-binding periplasmic protein [Escherichia coli KTE49]
gi|432709652|ref|ZP_19944717.1| putrescine-binding periplasmic protein [Escherichia coli KTE6]
gi|333968813|gb|AEG35618.1| Putrescine ABC transporter putrescine-binding protein [Escherichia
coli NA114]
gi|430946546|gb|ELC66469.1| putrescine-binding periplasmic protein [Escherichia coli KTE178]
gi|431093913|gb|ELD99569.1| putrescine-binding periplasmic protein [Escherichia coli KTE49]
gi|431251354|gb|ELF45371.1| putrescine-binding periplasmic protein [Escherichia coli KTE6]
Length = 370
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|386613073|ref|YP_006132739.1| putrescine-binding periplasmic protein PotF [Escherichia coli
UMNK88]
gi|332342242|gb|AEE55576.1| putrescine-binding periplasmic protein PotF [Escherichia coli
UMNK88]
Length = 370
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|422595046|ref|ZP_16669335.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|330985352|gb|EGH83455.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. lachrymans str. M301315]
Length = 359
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 37 VWVAVGWSSDV---LPAVKRMSN---VAVVVPKSGASLWADLWAIPA 77
+ VAVG+S D+ L ++ N ++ VVPK GA +W D+ AIPA
Sbjct: 227 ICVAVGYSGDISLALEQAQKAGNNITISYVVPKEGAPMWFDMIAIPA 273
>gi|227329301|ref|ZP_03833325.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 369
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ D+L A R N+ +PK GA + D+ AIP ++
Sbjct: 236 DICVAVGWAGDILQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|170769001|ref|ZP_02903454.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia albertii TW07627]
gi|170122073|gb|EDS91004.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia albertii TW07627]
Length = 370
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|147334|gb|AAA24409.1| periplasmic putrescine binding protein [Escherichia coli]
Length = 370
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|386638205|ref|YP_006105003.1| putrescine-binding periplasmic protein [Escherichia coli ABU 83972]
gi|432410855|ref|ZP_19653536.1| putrescine-binding periplasmic protein [Escherichia coli KTE39]
gi|432430903|ref|ZP_19673346.1| putrescine-binding periplasmic protein [Escherichia coli KTE187]
gi|432435431|ref|ZP_19677830.1| putrescine-binding periplasmic protein [Escherichia coli KTE188]
gi|432455718|ref|ZP_19697917.1| putrescine-binding periplasmic protein [Escherichia coli KTE201]
gi|432494656|ref|ZP_19736472.1| putrescine-binding periplasmic protein [Escherichia coli KTE214]
gi|432503495|ref|ZP_19745230.1| putrescine-binding periplasmic protein [Escherichia coli KTE220]
gi|432522940|ref|ZP_19760077.1| putrescine-binding periplasmic protein [Escherichia coli KTE230]
gi|432567686|ref|ZP_19804211.1| putrescine-binding periplasmic protein [Escherichia coli KTE53]
gi|432591906|ref|ZP_19828233.1| putrescine-binding periplasmic protein [Escherichia coli KTE60]
gi|432606673|ref|ZP_19842866.1| putrescine-binding periplasmic protein [Escherichia coli KTE67]
gi|432650315|ref|ZP_19886075.1| putrescine-binding periplasmic protein [Escherichia coli KTE87]
gi|432782739|ref|ZP_20016923.1| putrescine-binding periplasmic protein [Escherichia coli KTE63]
gi|432843158|ref|ZP_20076493.1| putrescine-binding periplasmic protein [Escherichia coli KTE141]
gi|432994584|ref|ZP_20183198.1| putrescine-binding periplasmic protein [Escherichia coli KTE218]
gi|432999002|ref|ZP_20187540.1| putrescine-binding periplasmic protein [Escherichia coli KTE223]
gi|433057146|ref|ZP_20244229.1| putrescine-binding periplasmic protein [Escherichia coli KTE124]
gi|433114738|ref|ZP_20300552.1| putrescine-binding periplasmic protein [Escherichia coli KTE153]
gi|433124397|ref|ZP_20309984.1| putrescine-binding periplasmic protein [Escherichia coli KTE160]
gi|433138457|ref|ZP_20323741.1| putrescine-binding periplasmic protein [Escherichia coli KTE167]
gi|433148244|ref|ZP_20333308.1| putrescine-binding periplasmic protein [Escherichia coli KTE174]
gi|433206972|ref|ZP_20390667.1| putrescine-binding periplasmic protein [Escherichia coli KTE97]
gi|433211720|ref|ZP_20395333.1| putrescine-binding periplasmic protein [Escherichia coli KTE99]
gi|442606405|ref|ZP_21021205.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli Nissle 1917]
gi|307552697|gb|ADN45472.1| putrescine-binding periplasmic protein precursor [Escherichia coli
ABU 83972]
gi|430937353|gb|ELC57608.1| putrescine-binding periplasmic protein [Escherichia coli KTE39]
gi|430955343|gb|ELC74126.1| putrescine-binding periplasmic protein [Escherichia coli KTE187]
gi|430965759|gb|ELC83168.1| putrescine-binding periplasmic protein [Escherichia coli KTE188]
gi|430984445|gb|ELD01068.1| putrescine-binding periplasmic protein [Escherichia coli KTE201]
gi|431027261|gb|ELD40324.1| putrescine-binding periplasmic protein [Escherichia coli KTE214]
gi|431041541|gb|ELD52041.1| putrescine-binding periplasmic protein [Escherichia coli KTE220]
gi|431054250|gb|ELD63831.1| putrescine-binding periplasmic protein [Escherichia coli KTE230]
gi|431102634|gb|ELE07448.1| putrescine-binding periplasmic protein [Escherichia coli KTE53]
gi|431131822|gb|ELE33838.1| putrescine-binding periplasmic protein [Escherichia coli KTE60]
gi|431140125|gb|ELE41902.1| putrescine-binding periplasmic protein [Escherichia coli KTE67]
gi|431192871|gb|ELE92215.1| putrescine-binding periplasmic protein [Escherichia coli KTE87]
gi|431331138|gb|ELG18401.1| putrescine-binding periplasmic protein [Escherichia coli KTE63]
gi|431396929|gb|ELG80391.1| putrescine-binding periplasmic protein [Escherichia coli KTE141]
gi|431508797|gb|ELH87068.1| putrescine-binding periplasmic protein [Escherichia coli KTE218]
gi|431513342|gb|ELH91425.1| putrescine-binding periplasmic protein [Escherichia coli KTE223]
gi|431573714|gb|ELI46511.1| putrescine-binding periplasmic protein [Escherichia coli KTE124]
gi|431636448|gb|ELJ04579.1| putrescine-binding periplasmic protein [Escherichia coli KTE153]
gi|431649204|gb|ELJ16563.1| putrescine-binding periplasmic protein [Escherichia coli KTE160]
gi|431664635|gb|ELJ31369.1| putrescine-binding periplasmic protein [Escherichia coli KTE167]
gi|431676357|gb|ELJ42477.1| putrescine-binding periplasmic protein [Escherichia coli KTE174]
gi|431732188|gb|ELJ95644.1| putrescine-binding periplasmic protein [Escherichia coli KTE97]
gi|431735918|gb|ELJ99262.1| putrescine-binding periplasmic protein [Escherichia coli KTE99]
gi|441712481|emb|CCQ07182.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli Nissle 1917]
Length = 370
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|157160376|ref|YP_001457694.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli HS]
gi|170020743|ref|YP_001725697.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli ATCC 8739]
gi|193069329|ref|ZP_03050284.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E110019]
gi|194438393|ref|ZP_03070483.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 101-1]
gi|251784398|ref|YP_002998702.1| potF, subunit of putrescine ABC transporter [Escherichia coli
BL21(DE3)]
gi|253774116|ref|YP_003036947.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160969|ref|YP_003044077.1| putrescine transporter subunit periplasmic-binding component of ABC
superfamily [Escherichia coli B str. REL606]
gi|254287777|ref|YP_003053525.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli BL21(DE3)]
gi|293414132|ref|ZP_06656781.1| hypothetical protein ECDG_00683 [Escherichia coli B185]
gi|312970978|ref|ZP_07785157.1| putrescine-binding periplasmic protein [Escherichia coli 1827-70]
gi|417120464|ref|ZP_11970022.1| putrescine-binding periplasmic protein [Escherichia coli 97.0246]
gi|417627783|ref|ZP_12278030.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_MHI813]
gi|417690217|ref|ZP_12339441.1| putrescine-binding periplasmic protein [Shigella boydii 5216-82]
gi|421776936|ref|ZP_16213537.1| bacterial extracellular solute-binding protein [Escherichia coli
AD30]
gi|422835645|ref|ZP_16883698.1| putrescine-binding periplasmic protein [Escherichia coli E101]
gi|425287734|ref|ZP_18678640.1| putrescine-binding periplasmic protein [Escherichia coli 3006]
gi|432453610|ref|ZP_19695847.1| putrescine-binding periplasmic protein [Escherichia coli KTE193]
gi|432530189|ref|ZP_19767229.1| putrescine-binding periplasmic protein [Escherichia coli KTE233]
gi|432542240|ref|ZP_19779096.1| putrescine-binding periplasmic protein [Escherichia coli KTE236]
gi|432547710|ref|ZP_19784497.1| putrescine-binding periplasmic protein [Escherichia coli KTE237]
gi|432620994|ref|ZP_19857035.1| putrescine-binding periplasmic protein [Escherichia coli KTE76]
gi|432673850|ref|ZP_19909339.1| putrescine-binding periplasmic protein [Escherichia coli KTE142]
gi|432814491|ref|ZP_20048281.1| putrescine-binding periplasmic protein [Escherichia coli KTE115]
gi|433032350|ref|ZP_20220124.1| putrescine-binding periplasmic protein [Escherichia coli KTE112]
gi|442599401|ref|ZP_21017119.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|157066056|gb|ABV05311.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli HS]
gi|169755671|gb|ACA78370.1| extracellular solute-binding protein family 1 [Escherichia coli
ATCC 8739]
gi|192957282|gb|EDV87730.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E110019]
gi|194422617|gb|EDX38614.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 101-1]
gi|242376671|emb|CAQ31382.1| potF, subunit of putrescine ABC transporter [Escherichia coli
BL21(DE3)]
gi|253325160|gb|ACT29762.1| extracellular solute-binding protein family 1 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972870|gb|ACT38541.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli B str. REL606]
gi|253977084|gb|ACT42754.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli BL21(DE3)]
gi|291434190|gb|EFF07163.1| hypothetical protein ECDG_00683 [Escherichia coli B185]
gi|310336739|gb|EFQ01906.1| putrescine-binding periplasmic protein [Escherichia coli 1827-70]
gi|332088887|gb|EGI93999.1| putrescine-binding periplasmic protein [Shigella boydii 5216-82]
gi|345378087|gb|EGX10018.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_MHI813]
gi|371611824|gb|EHO00343.1| putrescine-binding periplasmic protein [Escherichia coli E101]
gi|386149119|gb|EIG95551.1| putrescine-binding periplasmic protein [Escherichia coli 97.0246]
gi|408216953|gb|EKI41240.1| putrescine-binding periplasmic protein [Escherichia coli 3006]
gi|408458050|gb|EKJ81840.1| bacterial extracellular solute-binding protein [Escherichia coli
AD30]
gi|430973749|gb|ELC90694.1| putrescine-binding periplasmic protein [Escherichia coli KTE193]
gi|431056563|gb|ELD66064.1| putrescine-binding periplasmic protein [Escherichia coli KTE233]
gi|431076494|gb|ELD83989.1| putrescine-binding periplasmic protein [Escherichia coli KTE236]
gi|431083646|gb|ELD89818.1| putrescine-binding periplasmic protein [Escherichia coli KTE237]
gi|431161460|gb|ELE61931.1| putrescine-binding periplasmic protein [Escherichia coli KTE76]
gi|431217224|gb|ELF14804.1| putrescine-binding periplasmic protein [Escherichia coli KTE142]
gi|431366714|gb|ELG53211.1| putrescine-binding periplasmic protein [Escherichia coli KTE115]
gi|431558736|gb|ELI32345.1| putrescine-binding periplasmic protein [Escherichia coli KTE112]
gi|441651671|emb|CCQ02616.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
Length = 370
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|291616867|ref|YP_003519609.1| PotF [Pantoea ananatis LMG 20103]
gi|291151897|gb|ADD76481.1| PotF [Pantoea ananatis LMG 20103]
Length = 369
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
++ VA+GWS D+L A R N+ VPK GA + D+ AIP ++
Sbjct: 236 NICVAIGWSGDILQAKNRAEKAKNGVNIGYSVPKEGALAFFDMMAIPKDAK 286
>gi|104784200|ref|YP_610698.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas entomophila L48]
gi|95113187|emb|CAK17915.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas entomophila L48]
Length = 364
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIP 76
D+ VA G+S DV A K+ +A +PK G +LW D+ AIP
Sbjct: 231 DICVAAGFSGDVFQAKARAEEAKKGVKLAYAIPKEGGNLWFDVLAIP 277
>gi|417230223|ref|ZP_12031809.1| putrescine-binding periplasmic protein [Escherichia coli 5.0959]
gi|386206713|gb|EII11219.1| putrescine-binding periplasmic protein [Escherichia coli 5.0959]
Length = 370
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|377576361|ref|ZP_09805345.1| putrescine ABC transporter substrate binding periplasmic protein
[Escherichia hermannii NBRC 105704]
gi|377542393|dbj|GAB50510.1| putrescine ABC transporter substrate binding periplasmic protein
[Escherichia hermannii NBRC 105704]
Length = 370
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R N++ ++PK GA + D++A+P ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNISYIIPKEGALAFFDVFAMPTDAK 287
>gi|417455361|ref|ZP_12163500.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
gi|353634815|gb|EHC81292.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
Length = 349
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 247 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 297
>gi|357408430|ref|YP_004920353.1| ABC transporter substrate-binding protein [Streptomyces cattleya
NRRL 8057 = DSM 46488]
gi|337763379|emb|CCB72087.1| ABC-transporter polyamine-binding lipoprotein [Streptomyces
cattleya NRRL 8057 = DSM 46488]
Length = 418
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 6 GAIRSIQESSTKFWYGVVKLY---TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVP 62
G +R +ES GVV+ Y T + D+W ++ +S DV A + S++ V+P
Sbjct: 251 GWLRGQRES------GVVRSYSTATYQSSLQRGDLWASLVYSGDVFQANRGGSHLEFVIP 304
Query: 63 KSGASLWADLWAIPAAS 79
+ G +W D IP+++
Sbjct: 305 EEGGLIWTDNLCIPSSA 321
>gi|158311889|ref|YP_001504397.1| extracellular solute-binding protein [Frankia sp. EAN1pec]
gi|158107294|gb|ABW09491.1| extracellular solute-binding protein family 1 [Frankia sp. EAN1pec]
Length = 417
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 21 GVVKLY---TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 76
G+V+ Y + ++ D+W+++ WS DV + + + VVP+ G +W D IP
Sbjct: 273 GIVRKYYDQSYIDSLAGGDLWISMAWSGDVYQQLAAGTKLKFVVPEEGGLIWTDSMCIP 331
>gi|398931206|ref|ZP_10665038.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398164108|gb|EJM52254.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 380
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D W+A+ W+ D + + + + K G LW+D +AIP +S HK A + +
Sbjct: 255 DAWLAMSWTGDASQLHRDNAQMQFELGKEGGELWSDFFAIPKSSE-HKDAAYAF-INYLL 312
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
DP +++ EV+ PS + LP +L D I P AE L+ E
Sbjct: 313 DPQRNKL------EVLSHGYPSGDKRVDALLPVAMLD-------DPIM-YPAAEALSPLE 358
Query: 156 F 156
F
Sbjct: 359 F 359
>gi|347732884|ref|ZP_08865955.1| potD [Desulfovibrio sp. A2]
gi|347518360|gb|EGY25534.1| potD [Desulfovibrio sp. A2]
Length = 345
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTN 85
+AF +V + W+ D A N+ + PK G LW D AIP ++ HK N
Sbjct: 213 QAFISEEVAAGLIWNGDAYIAASENKNLVYIYPKEGVPLWVDSLAIPVGAK-HKEN 267
>gi|408681037|ref|YP_006880864.1| Putrescine ABC transporter putrescine-binding protein PotF
[Streptomyces venezuelae ATCC 10712]
gi|328885366|emb|CCA58605.1| Putrescine ABC transporter putrescine-binding protein PotF
[Streptomyces venezuelae ATCC 10712]
Length = 388
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTN 85
DV +S DV+ ++ VVP+ GA LWA+ IP +R HKTN
Sbjct: 255 DVLACQAYSGDVIQLQADNPDIEFVVPEEGAELWAESLLIPNLAR-HKTN 303
>gi|209885624|ref|YP_002289481.1| putrescine-binding periplasmic protein [Oligotropha carboxidovorans
OM5]
gi|337740782|ref|YP_004632510.1| putrescine-binding periplasmic protein PotF [Oligotropha
carboxidovorans OM5]
gi|386029799|ref|YP_005950574.1| putrescine-binding periplasmic protein PotF [Oligotropha
carboxidovorans OM4]
gi|209873820|gb|ACI93616.1| putrescine-binding periplasmic protein [Oligotropha carboxidovorans
OM5]
gi|336094867|gb|AEI02693.1| putrescine-binding periplasmic protein PotF [Oligotropha
carboxidovorans OM4]
gi|336098446|gb|AEI06269.1| putrescine-binding periplasmic protein PotF [Oligotropha
carboxidovorans OM5]
Length = 368
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 31 AFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
A ++ +AVGWS D+ A KR + +A +PK GA ++ D AIP+ ++
Sbjct: 230 ALATGEICLAVGWSGDIKQAQKRAAESKNGVEIAYAIPKEGAQMFFDNLAIPSDAK 285
>gi|438073786|ref|ZP_20857245.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|435310749|gb|ELO85112.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
Length = 187
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 54 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 104
>gi|429048944|ref|ZP_19113597.1| putrescine-binding periplasmic protein [Escherichia coli 97.0003]
gi|427304345|gb|EKW67002.1| putrescine-binding periplasmic protein [Escherichia coli 97.0003]
Length = 370
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R NV+ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAK 287
>gi|378767926|ref|YP_005196396.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis LMG 5342]
gi|386015231|ref|YP_005933511.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis AJ13355]
gi|386080026|ref|YP_005993551.1| putrescine-binding periplasmic protein PotF [Pantoea ananatis PA13]
gi|327393293|dbj|BAK10715.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis AJ13355]
gi|354989207|gb|AER33331.1| putrescine-binding periplasmic protein PotF [Pantoea ananatis PA13]
gi|365187409|emb|CCF10359.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis LMG 5342]
Length = 369
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
++ VA+GWS D+L A R N+ VPK GA + D+ AIP ++
Sbjct: 236 NICVAIGWSGDILQAKNRAEKAKNGVNIGYSVPKEGALAFFDMMAIPKDAK 286
>gi|227112035|ref|ZP_03825691.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|253688079|ref|YP_003017269.1| family 1 extracellular solute-binding protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251754657|gb|ACT12733.1| extracellular solute-binding protein family 1 [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 369
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ D+L A R N+ +PK GA + D+ AIP ++
Sbjct: 236 DICVAVGWAGDILQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|386352572|ref|YP_006050819.1| ABC-transporter polyamine-binding lipoprotein [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|365810651|gb|AEW98866.1| ABC-transporter polyamine-binding lipoprotein [Streptomyces
cattleya NRRL 8057 = DSM 46488]
Length = 413
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 6 GAIRSIQESSTKFWYGVVKLY---TLSEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVP 62
G +R +ES GVV+ Y T + D+W ++ +S DV A + S++ V+P
Sbjct: 246 GWLRGQRES------GVVRSYSTATYQSSLQRGDLWASLVYSGDVFQANRGGSHLEFVIP 299
Query: 63 KSGASLWADLWAIPAAS 79
+ G +W D IP+++
Sbjct: 300 EEGGLIWTDNLCIPSSA 316
>gi|427716541|ref|YP_007064535.1| extracellular solute-binding protein [Calothrix sp. PCC 7507]
gi|427348977|gb|AFY31701.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
7507]
Length = 361
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 16/127 (12%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D+ +A+ +S+D + K ++ V+P+SG+SLW D IP + ++
Sbjct: 236 DLVLAMCYSADAIRVSKENPHLKYVIPRSGSSLWTDTIIIPKTAP-------------NL 282
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
D + I + EV S T + E L + T+L PP I+ +CE
Sbjct: 283 DGAYAWINFILQPEVAAQVSQRLSVATPNRSGFEQLPKQIQNNTNLF---PPESIVEKCE 339
Query: 156 FLEPLSE 162
+ PL +
Sbjct: 340 RITPLGK 346
>gi|400756101|ref|YP_006564469.1| putrescine-binding periplasmic protein PotF [Phaeobacter
gallaeciensis 2.10]
gi|398655254|gb|AFO89224.1| putrescine-binding periplasmic protein PotF [Phaeobacter
gallaeciensis 2.10]
Length = 361
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 23 VKLYTLSE---AFGIRDVWVAVGWSSDVLPAVKRM----SNVAVV--VPKSGASLWADLW 73
VK + SE A D+ VA GWS D+L A R + V +V PK GA +W D
Sbjct: 212 VKKFHSSEYINALANGDICVAFGWSGDILQARDRADEADNGVEIVFNAPKEGALMWFDQM 271
Query: 74 AIP 76
AIP
Sbjct: 272 AIP 274
>gi|403058135|ref|YP_006646352.1| Putrescine-binding periplasmic protein [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402805461|gb|AFR03099.1| Putrescine-binding periplasmic protein [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 369
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VAVGW+ D+L A R N+ +PK GA + D+ AIP ++
Sbjct: 236 DICVAVGWAGDILQAGNRAKEAKNGVNIQYSIPKEGALAFFDVLAIPKDAK 286
>gi|337287500|ref|YP_004626973.1| family 1 extracellular solute-binding protein [Thermodesulfatator
indicus DSM 15286]
gi|335360328|gb|AEH46009.1| extracellular solute-binding protein family 1 [Thermodesulfatator
indicus DSM 15286]
Length = 353
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%)
Query: 37 VWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 80
VWV GW K ++ + PKSGA W D +AIP SR
Sbjct: 225 VWVETGWDGIGWNLHKENPDIDFIAPKSGALGWIDTFAIPRRSR 268
>gi|299133628|ref|ZP_07026822.1| extracellular solute-binding protein family 1 [Afipia sp. 1NLS2]
gi|298591464|gb|EFI51665.1| extracellular solute-binding protein family 1 [Afipia sp. 1NLS2]
Length = 363
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 31 AFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
A ++ +AVGWS D+ A KR + +A +PK GA ++ D AIP+ ++
Sbjct: 225 ALATGEICLAVGWSGDIKQAQKRAAESNNGVEIAYAIPKEGAQMFFDNLAIPSDAK 280
>gi|294675360|ref|YP_003575976.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Prevotella ruminicola 23]
gi|294473025|gb|ADE82414.1| putative polyamine ABC transporter, periplasmic polyamine-binding
protein [Prevotella ruminicola 23]
Length = 430
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 38 WVAVGWSSDVLPAVKRM---SNVAVVVPKSGASLWADLWAIPAASR 80
W+++ W+ D A+ +N+ VVP G+ WAD W IP +
Sbjct: 250 WMSITWNGDARWAIDEAGDNTNLQYVVPIEGSDCWADCWVIPTTCK 295
>gi|33152199|ref|NP_873552.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus ducreyi 35000HP]
gi|33148421|gb|AAP95941.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus ducreyi 35000HP]
Length = 359
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 29 SEAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRA 88
+ AF +V V W+ V A K + + +V PK G LW D AIPA S+ + +
Sbjct: 226 ANAFISGEVSVGQLWNGSVRIAKKEQAPIDMVFPKEGPVLWVDTLAIPANSKNKENAHKL 285
Query: 89 SQWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPA 148
+ +S P +++ L G S +E V LP+E+ + P++ P A
Sbjct: 286 INYLLSA-PVAEKLTLAI------GYPTSNIEALKV-LPKEITQ-DPAI-------YPTA 329
Query: 149 EILARCEFLEPLSEA 163
E+L + ++ + + +A
Sbjct: 330 EVLQKSQWQDDVGDA 344
>gi|87120811|ref|ZP_01076704.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinomonas sp. MED121]
gi|86164039|gb|EAQ65311.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinomonas sp. MED121]
Length = 411
Score = 36.6 bits (83), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 1 MKGIVGAIRSIQESSTKFWYGVVKLYTLSEAFGIRDVWVAVGWSSDVLPAVKRMS----- 55
+K I + +ES TKF Y A G ++ V++G++ DVL + R
Sbjct: 247 LKKATKLISASRESFTKF---SSSQYISDLANG--ELCVSMGYNGDVLQSQSRAIEAGQG 301
Query: 56 -NVAVVVPKSGASLWADLWAIPA 77
N++ ++PK G+ +W DL AIPA
Sbjct: 302 INISYIIPKEGSLVWFDLMAIPA 324
>gi|399994557|ref|YP_006574797.1| putrescine-binding periplasmic protein PotF [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398659112|gb|AFO93078.1| putrescine-binding periplasmic protein PotF [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 361
Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 23 VKLYTLSE---AFGIRDVWVAVGWSSDVLPAVKRM----SNVAVV--VPKSGASLWADLW 73
VK + SE A D+ VA GWS D+L A R + V +V PK GA +W D
Sbjct: 212 VKKFHSSEYINALANGDICVAFGWSGDILQARDRADEADNGVEIVFNAPKEGALMWFDQM 271
Query: 74 AIP 76
AIP
Sbjct: 272 AIP 274
>gi|417340403|ref|ZP_12121730.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
gi|357959170|gb|EHJ83510.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
Length = 294
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 192 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 242
>gi|323144865|ref|ZP_08079434.1| putrescine-binding periplasmic protein [Succinatimonas hippei YIT
12066]
gi|322415390|gb|EFY06155.1| putrescine-binding periplasmic protein [Succinatimonas hippei YIT
12066]
Length = 371
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
++ A+G+S D+L A R + + PK G+ LW D W IP ++
Sbjct: 229 EICAAIGYSGDILQAANRAALANQNYTIEYTFPKEGSLLWFDCWTIPRGAK 279
>gi|402565248|ref|YP_006614593.1| putrescine ABC transporter binding exported protein [Burkholderia
cepacia GG4]
gi|402246445|gb|AFQ46899.1| putrescine ABC transporter binding exported protein [Burkholderia
cepacia GG4]
Length = 371
Score = 36.6 bits (83), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 16/111 (14%)
Query: 35 RDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRA 88
DV VA+GWS DV A +R S ++ PK G LW D+ IP + ++ A
Sbjct: 237 NDVCVALGWSGDVGIAHRRSSEAKRSYDIKFSNPKEGGLLWFDVMVIPKDAPHPES---A 293
Query: 89 SQW-SISIDPSM-----DRILLPFKQEVI-PGTSPSALETTLVKLPEELLK 132
+W + DP + + + P + P +PS + V PE++LK
Sbjct: 294 MKWINYVSDPKVNAAITNTVFYPTANKAAHPFVTPSVAQDPTVYPPEDVLK 344
>gi|153012142|ref|YP_001373352.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
49188]
gi|151564030|gb|ABS17523.1| extracellular solute-binding protein family 1 [Ochrobactrum
anthropi ATCC 49188]
Length = 384
Score = 36.6 bits (83), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D W+ + W+ D + + + + K G +W+D + IP ++ + + + + +
Sbjct: 259 DAWLTMCWTGDAKQMNRDLPEIQYTLGKEGGEIWSDFYTIPTSAPNREGAY--ALLNFLL 316
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
DPS++ F +P AL +PEE ++ P L P AE+L+ E
Sbjct: 317 DPSVNAREELFHGYPVPDARVEAL------VPEE-MRNDPILH-------PAAELLSTLE 362
Query: 156 F 156
F
Sbjct: 363 F 363
>gi|414162976|ref|ZP_11419223.1| hypothetical protein HMPREF9697_01124 [Afipia felis ATCC 53690]
gi|410880756|gb|EKS28596.1| hypothetical protein HMPREF9697_01124 [Afipia felis ATCC 53690]
Length = 363
Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 31 AFGIRDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
A ++ +AVGWS D+ A KR + +A +PK GA ++ D AIP+ ++
Sbjct: 225 ALATGEICLAVGWSGDIKQAQKRAAESNNGVEIAYAIPKEGAQMFFDNLAIPSDAK 280
>gi|117928490|ref|YP_873041.1| twin-arginine translocation pathway signal protein [Acidothermus
cellulolyticus 11B]
gi|117648953|gb|ABK53055.1| Twin-arginine translocation pathway signal [Acidothermus
cellulolyticus 11B]
Length = 420
Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 21 GVVKLYTLSE---AFGIRDVWVAVGWSSDVLPAVKR-MSNVAVVVPKSGASLWAD 71
G+V+ Y + A D+W + WS DV A+ SN+ V+PK G +W D
Sbjct: 261 GIVRQYYEQDYIKALSNGDIWASQAWSGDVFQALASGASNLKFVIPKEGGVIWTD 315
>gi|418825311|ref|ZP_13380614.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392816284|gb|EJA72213.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
Length = 325
Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 192 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 242
>gi|295676771|ref|YP_003605295.1| extracellular solute-binding protein [Burkholderia sp. CCGE1002]
gi|295436614|gb|ADG15784.1| extracellular solute-binding protein family 1 [Burkholderia sp.
CCGE1002]
Length = 366
Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
DV A GWS DV+ A K+ + VPK GA +W D+ AIP ++ HK
Sbjct: 233 DVCFAYGWSGDVVIAKHRALEAKKPYKIEYFVPKGGAPVWFDVMAIPKDAK-HK 285
>gi|419749907|ref|ZP_14276379.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|381309126|gb|EIC49968.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
Length = 150
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 17 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 67
>gi|329964413|ref|ZP_08301494.1| ABC transporter, solute-binding protein [Bacteroides fluxus YIT
12057]
gi|328525462|gb|EGF52510.1| ABC transporter, solute-binding protein [Bacteroides fluxus YIT
12057]
Length = 443
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 37 VWVAVGWSSDVLPAVKRMSNVAV----VVPKSGASLWADLWAIPAASR 80
W+ + WS D + A++ + V V VP+ G+++W D W IP SR
Sbjct: 251 TWLNLTWSGDAVWAIEEAAAVGVDLDYEVPQEGSNIWYDGWVIPKYSR 298
>gi|238027222|ref|YP_002911453.1| family 1 extracellular solute-binding protein [Burkholderia glumae
BGR1]
gi|237876416|gb|ACR28749.1| Extracellular solute-binding protein, family 1 [Burkholderia glumae
BGR1]
Length = 364
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
D+ A GWS DV+ A K+ V VPK GA +W D+ AIP ++ HK
Sbjct: 231 DICFAFGWSGDVVIAKHRAQEAKKPYKVEYYVPKGGAPVWFDVMAIPKDAK-HK 283
>gi|254476380|ref|ZP_05089766.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Ruegeria sp. R11]
gi|214030623|gb|EEB71458.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Ruegeria sp. R11]
Length = 361
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 23 VKLYTLSE---AFGIRDVWVAVGWSSDVLPAVKRM----SNVAVV--VPKSGASLWADLW 73
VK + SE A D+ VA GWS D+L A R + V +V PK GA +W D
Sbjct: 212 VKKFHSSEYINALANGDICVAFGWSGDILQARDRAAEADNGVEIVYNAPKEGALMWFDQM 271
Query: 74 AIP 76
AIP
Sbjct: 272 AIP 274
>gi|365848786|ref|ZP_09389257.1| putrescine-binding periplasmic protein [Yokenella regensburgei ATCC
43003]
gi|364569430|gb|EHM47052.1| putrescine-binding periplasmic protein [Yokenella regensburgei ATCC
43003]
Length = 370
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNISYSIPKEGALAFFDVFAMPADAK 287
>gi|311280262|ref|YP_003942493.1| extracellular solute-binding protein [Enterobacter cloacae SCF1]
gi|308749457|gb|ADO49209.1| extracellular solute-binding protein family 1 [Enterobacter cloacae
SCF1]
Length = 370
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D+ VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DICVAIGWAGDVWQAANRAKEAKNGVNISYSIPKEGALAFFDVFAMPADAK 287
>gi|150397369|ref|YP_001327836.1| putative periplasmic binding ABC transporter protein [Sinorhizobium
medicae WSM419]
gi|150028884|gb|ABR61001.1| putative periplasmic binding ABC transporter protein [Sinorhizobium
medicae WSM419]
Length = 386
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D W+ + W++D + M + V+ K G +W+D +AIP ++ +A+ +++
Sbjct: 261 DAWMTMCWTNDGAQLNRDMPEIKFVLGKDGGEIWSDFYAIPKSAAN-----KAAGYAL-- 313
Query: 96 DPSMDRILLPFK--QEVIPGTSPSALETTLVKLPEELLKGK 134
+D ++ P +E I +P+ L LP ++ K
Sbjct: 314 ---LDYLMAPNSAVKEHIANGAPTTDSRVLKLLPADVTSNK 351
>gi|330465882|ref|YP_004403625.1| family 1 extracellular solute-binding protein [Verrucosispora maris
AB-18-032]
gi|328808853|gb|AEB43025.1| extracellular solute-binding protein family 1 [Verrucosispora maris
AB-18-032]
Length = 394
Score = 36.6 bits (83), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRA 88
D+ +GWS D++ + VVP SG LW+D +P + HK N A
Sbjct: 265 DIAACIGWSGDIIQLGFDDEQIKFVVPDSGVMLWSDNMLVPNKA-THKANAEA 316
>gi|209520809|ref|ZP_03269554.1| extracellular solute-binding protein family 1 [Burkholderia sp.
H160]
gi|209498758|gb|EDZ98868.1| extracellular solute-binding protein family 1 [Burkholderia sp.
H160]
Length = 366
Score = 36.6 bits (83), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASRLHK 83
DV A GWS DV+ A K+ + VPK GA +W D+ AIP ++ HK
Sbjct: 233 DVCFAYGWSGDVVIAKHRAIEAKKPYKIEYFVPKGGAPVWFDVMAIPKDAK-HK 285
>gi|445253380|ref|ZP_21409092.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|444889426|gb|ELY12869.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 340
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|428311756|ref|YP_007122733.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
gi|428253368|gb|AFZ19327.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
Length = 378
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 79
D+ VA+ +S+D + ++ VVPKSG+SLW D AIP ++
Sbjct: 252 DLSVAMCYSADANEVMGENESLEYVVPKSGSSLWMDTLAIPKSA 295
>gi|417389662|ref|ZP_12153396.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
gi|353621258|gb|EHC71130.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
Length = 339
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 238 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|409249324|ref|YP_006885156.1| Spermidine/putrescine-binding periplasmic protein SPBP; Flags:
Precursor [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|416724823|ref|ZP_11845207.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|320085152|emb|CBY94939.1| Spermidine/putrescine-binding periplasmic protein SPBP; Flags:
Precursor [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|323243138|gb|EGA27158.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
Length = 353
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 220 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 270
>gi|437473908|ref|ZP_20766015.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435224831|gb|ELO06780.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
Length = 383
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 250 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 300
>gi|296268994|ref|YP_003651626.1| family 1 extracellular solute-binding protein [Thermobispora
bispora DSM 43833]
gi|296091781|gb|ADG87733.1| extracellular solute-binding protein family 1 [Thermobispora
bispora DSM 43833]
Length = 419
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 21 GVVKLY---TLSEAFGIRDVWVAVGWSSDVLPA-VKRMSNVAVVVPKSGASLWADLWAIP 76
G+V+ Y + + D+W+ + WS DV + +++ V+P+ GA++W D IP
Sbjct: 259 GIVRKYYDQSYIDPLAKGDIWLTMAWSGDVFQKNISDGTDLRFVIPEEGATIWTDNMVIP 318
>gi|218887047|ref|YP_002436368.1| extracellular solute-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758001|gb|ACL08900.1| extracellular solute-binding protein family 1 [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 358
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 30 EAFGIRDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTN 85
+AF +V + W+ D A N+ V P+ G LW D AIP ++ HK N
Sbjct: 226 QAFISEEVAAGLIWNGDAYIAASENENLVYVYPREGVPLWVDSLAIPVGAK-HKDN 280
>gi|417356781|ref|ZP_12132254.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Give str.
S5-487]
gi|353595222|gb|EHC52527.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Give str.
S5-487]
Length = 332
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 238 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|186476038|ref|YP_001857508.1| extracellular solute-binding protein [Burkholderia phymatum STM815]
gi|184192497|gb|ACC70462.1| extracellular solute-binding protein family 1 [Burkholderia
phymatum STM815]
Length = 366
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 28/134 (20%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
DV A GWS DV+ A R + + +PK GA +W D+ AIP + K A+
Sbjct: 233 DVCFAYGWSGDVVIAKHRAAEAKKPYKIDYYIPKGGAPVWFDVMAIP---KDAKNKEAAT 289
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLI---AGVP 146
+W ++ I P I T V P + + + D+ A P
Sbjct: 290 EW-------INYIETPQVHAAI---------TNAVYYPSANAEARKYVDKDVANDPAVYP 333
Query: 147 PAEILARCEFLEPL 160
PA+++ L+PL
Sbjct: 334 PADVVKTLFLLKPL 347
>gi|398872427|ref|ZP_10627720.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398202803|gb|EJM89638.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 380
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISI 95
D W+A+ W+ D + + + + K G LW+D +AIP +S HK A + +
Sbjct: 255 DAWLAMSWTGDASQLHRDNAQMQFELGKEGGELWSDFFAIPKSSE-HKDAAYAF-INYLL 312
Query: 96 DPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCE 155
DP +++ EV+ PS + LP +L D I P AE L+ E
Sbjct: 313 DPQHNKL------EVLSHGYPSGDKRVDALLPVVMLD-------DPIM-YPAAEALSPLE 358
Query: 156 F 156
F
Sbjct: 359 F 359
>gi|417325284|ref|ZP_12111298.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Adelaide
str. A4-669]
gi|353576540|gb|EHC38965.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Adelaide
str. A4-669]
Length = 347
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 238 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|417332548|ref|ZP_12116395.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Alachua
str. R6-377]
gi|353581346|gb|EHC42310.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Alachua
str. R6-377]
Length = 328
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 238 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|83649308|ref|YP_437743.1| spermidine/putrescine-binding periplasmic protein [Hahella
chejuensis KCTC 2396]
gi|83637351|gb|ABC33318.1| Spermidine/putrescine-binding periplasmic protein [Hahella
chejuensis KCTC 2396]
Length = 356
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 36 DVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 75
+VW+A+ ++ D L ++R +N+ V P G+ LW D A+
Sbjct: 230 EVWLAMAYNGDALNLMQRNANIDFVYPMEGSGLWLDSIAV 269
>gi|420369175|ref|ZP_14869900.1| putrescine-binding periplasmic protein [Shigella flexneri 1235-66]
gi|391321501|gb|EIQ78224.1| putrescine-binding periplasmic protein [Shigella flexneri 1235-66]
Length = 370
Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|417364520|ref|ZP_12137419.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353596944|gb|EHC53803.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
Length = 347
Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 238 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|417528396|ref|ZP_12185034.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Urbana str.
R8-2977]
gi|353668092|gb|EHD05386.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Urbana str.
R8-2977]
Length = 340
Score = 36.2 bits (82), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 238 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|224582727|ref|YP_002636525.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|375118328|ref|ZP_09763495.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Dublin str. SD3246]
gi|224467254|gb|ACN45084.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|326622595|gb|EGE28940.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Dublin str. SD3246]
Length = 380
Score = 36.2 bits (82), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 247 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 297
>gi|91783861|ref|YP_559067.1| ABC polyamine transporter, periplasmic ligand binding protein
[Burkholderia xenovorans LB400]
gi|91687815|gb|ABE31015.1| ABC polyamine transporter, periplasmic ligand binding protein
[Burkholderia xenovorans LB400]
Length = 366
Score = 36.2 bits (82), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 28/134 (20%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRAS 89
DV A GWS D++ A K+ V +PK GA +W D+ AIP + K A
Sbjct: 233 DVCFAYGWSGDIVIAKHRAVEAKKAYKVEYYIPKGGAPVWFDVMAIPKDA---KNKEAAL 289
Query: 90 QWSISIDPSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLI---AGVP 146
+W ++ I P I T V P L+ + + D+ A P
Sbjct: 290 EW-------INYIETPQVHAAI---------TNAVYYPSANLEARKYVDKDVANDPAVYP 333
Query: 147 PAEILARCEFLEPL 160
P E++ L+PL
Sbjct: 334 PPEVIKTLFLLKPL 347
>gi|417347886|ref|ZP_12126976.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|417517138|ref|ZP_12179859.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
gi|417538032|ref|ZP_12190746.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Wandsworth
str. A4-580]
gi|353577100|gb|EHC39369.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|353652358|gb|EHC94212.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
gi|353667371|gb|EHD04907.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Wandsworth
str. A4-580]
Length = 339
Score = 36.2 bits (82), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 238 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|417413311|ref|ZP_12158325.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Mississippi
str. A4-633]
gi|353625997|gb|EHC74643.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Mississippi
str. A4-633]
Length = 348
Score = 36.2 bits (82), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 238 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|418510965|ref|ZP_13077235.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366085214|gb|EHN49104.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
Length = 370
Score = 36.2 bits (82), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|416908982|ref|ZP_11931259.1| ABC spermidine/putrescine transporter, periplasmic ligand binding
protein, partial [Burkholderia sp. TJI49]
gi|325528683|gb|EGD05762.1| ABC spermidine/putrescine transporter, periplasmic ligand binding
protein [Burkholderia sp. TJI49]
Length = 185
Score = 36.2 bits (82), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 36 DVWVAVGWSSDVLPA------VKRMSNVAVVVPKSGASLWADLWAIP 76
D+ +A+GWS DV A K+ ++ V+P G+++W D+ AIP
Sbjct: 53 DICLALGWSGDVNSARIAAASAKKPYHIKYVIPTEGSAMWFDMMAIP 99
>gi|322514242|ref|ZP_08067303.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Actinobacillus ureae ATCC
25976]
gi|322119854|gb|EFX91868.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Actinobacillus ureae ATCC
25976]
Length = 360
Score = 36.2 bits (82), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Query: 39 VAVG--WSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLHKTNWRASQWSISID 96
V+VG W+ V A K + V +V PK G LW D AIPA ++ + + + +S
Sbjct: 235 VSVGQLWNGSVRIAKKEQAPVNMVFPKEGPVLWVDTLAIPANAKNKENAHKLINYLLSA- 293
Query: 97 PSMDRILLPFKQEVIPGTSPSALETTLVKLPEELLKGKPSLGTDLIAGVPPAEILARCEF 156
P +++ L P ++ AL+T LP+E+ T+ A P AE+L ++
Sbjct: 294 PVAEKLTLEIG---YPTSNVEALKT----LPKEI--------TEDPAIYPTAEVLKAAQW 338
Query: 157 LEPLSEA 163
+ + +A
Sbjct: 339 QDDVGDA 345
>gi|283833847|ref|ZP_06353588.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citrobacter youngae ATCC 29220]
gi|291070515|gb|EFE08624.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citrobacter youngae ATCC 29220]
Length = 370
Score = 36.2 bits (82), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|205357017|ref|ZP_02344173.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205324502|gb|EDZ12341.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 371
Score = 36.2 bits (82), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 238 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|437931523|ref|ZP_20851151.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|435311553|gb|ELO85677.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
Length = 237
Score = 36.2 bits (82), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 104 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 154
>gi|437834124|ref|ZP_20844892.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435301414|gb|ELO77442.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
Length = 240
Score = 36.2 bits (82), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 107 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 157
>gi|417372044|ref|ZP_12142440.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
gi|417382044|ref|ZP_12148128.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|417509588|ref|ZP_12174719.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
gi|353606362|gb|EHC60607.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
gi|353616115|gb|EHC67456.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353648906|gb|EHC91680.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
Length = 340
Score = 36.2 bits (82), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 238 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 288
>gi|283784617|ref|YP_003364482.1| putrescine ABC transporter substrate-binding protein [Citrobacter
rodentium ICC168]
gi|282948071|emb|CBG87636.1| putrescine ABC transporter, substrate-binding protein [Citrobacter
rodentium ICC168]
Length = 370
Score = 36.2 bits (82), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DTCVAIGWAGDVWQAANRAKEAKNGINISFSIPKEGAMAFFDVFAMPADAK 287
>gi|339998775|ref|YP_004729658.1| putrescine-binding periplasmic protein [Salmonella bongori NCTC
12419]
gi|339512136|emb|CCC29867.1| putrescine-binding periplasmic protein precursor [Salmonella
bongori NCTC 12419]
Length = 370
Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 36 DVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 80
D VA+GW+ DV A R N++ +PK GA + D++A+PA ++
Sbjct: 237 DTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPKEGAMAFFDVFAMPADAK 287
>gi|422599565|ref|ZP_16673740.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. mori str. 301020]
gi|330892538|gb|EGH25199.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. mori str. 301020]
Length = 359
Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 37 VWVAVGWSSDVL----PAVKRMSNVAV--VVPKSGASLWADLWAIPA 77
+ VAVG+S D+ A K +N+ + VVPK GA +W D+ AIPA
Sbjct: 227 ICVAVGYSGDISLAQEQAQKAGNNITISYVVPKEGAPMWFDMIAIPA 273
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,477,556,357
Number of Sequences: 23463169
Number of extensions: 139148317
Number of successful extensions: 327056
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 779
Number of HSP's that attempted gapping in prelim test: 326200
Number of HSP's gapped (non-prelim): 1043
length of query: 226
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 89
effective length of database: 9,144,741,214
effective search space: 813881968046
effective search space used: 813881968046
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)