BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040514
ENDFLKEQGMVLLESFVDPVVIYHSKGHTIPRIDERGQETMLSFIQKFQMI

High Scoring Gene Products

Symbol, full name Information P value
AT5G65400 protein from Arabidopsis thaliana 3.1e-12
AT4G24380 protein from Arabidopsis thaliana 1.9e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040514
        (51 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2168230 - symbol:AT5G65400 "AT5G65400" species...   164  3.1e-12   1
TAIR|locus:2135922 - symbol:AT4G24380 species:3702 "Arabi...   139  1.9e-09   1


>TAIR|locus:2168230 [details] [associations]
            symbol:AT5G65400 "AT5G65400" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005777 "peroxisome" evidence=IDA] EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0005777 InterPro:IPR005645
            Pfam:PF03959 OMA:HFIGERD EMBL:BT026418 IPI:IPI00534362
            RefSeq:NP_201343.2 UniGene:At.50558 ProteinModelPortal:Q0V802
            IntAct:Q0V802 PaxDb:Q0V802 PRIDE:Q0V802 EnsemblPlants:AT5G65400.1
            GeneID:836665 KEGG:ath:AT5G65400 TAIR:At5g65400 eggNOG:NOG288582
            HOGENOM:HOG000240836 InParanoid:Q0V802 PhylomeDB:Q0V802
            ProtClustDB:CLSN2918657 Genevestigator:Q0V802 Uniprot:Q0V802
        Length = 252

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 32/52 (61%), Positives = 41/52 (78%)

Query:     1 ENDFLKEQGMVLLESFVDPVVIYHSKGHTIPRIDERGQETMLSFIQKF-QMI 51
             E DFLK +G VL+ESFV+PVVI+HS GH IP++D + +ETMLSF Q   QM+
Sbjct:   190 ERDFLKIEGEVLVESFVEPVVIHHSGGHIIPKLDTKAEETMLSFFQSIRQML 241


>TAIR|locus:2135922 [details] [associations]
            symbol:AT4G24380 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0009611 "response to
            wounding" evidence=RCA] [GO:0009620 "response to fungus"
            evidence=RCA] [GO:0009693 "ethylene biosynthetic process"
            evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
            evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
            evidence=RCA] [GO:0015824 "proline transport" evidence=RCA]
            EMBL:CP002687 GenomeReviews:CT486007_GR InterPro:IPR005645
            Pfam:PF03959 UniGene:At.32351 UniGene:At.66636 eggNOG:NOG288582
            HOGENOM:HOG000240836 EMBL:BT024627 EMBL:AK118442 IPI:IPI00540525
            RefSeq:NP_567701.1 ProteinModelPortal:Q8GX45 STRING:Q8GX45
            PaxDb:Q8GX45 PRIDE:Q8GX45 DNASU:828540 EnsemblPlants:AT4G24380.1
            GeneID:828540 KEGG:ath:AT4G24380 TAIR:At4g24380 InParanoid:Q8GX45
            OMA:KGHTVPR PhylomeDB:Q8GX45 Genevestigator:Q8GX45 Uniprot:Q8GX45
        Length = 234

 Score = 139 (54.0 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 24/49 (48%), Positives = 35/49 (71%)

Query:     1 ENDFLKEQGMVLLESFVDPVVIYHSKGHTIPRIDERGQETMLSFIQKFQ 49
             E DFLK  G  L+ES+ +PVV++H KGHT+PR+DE+  E + +FI   +
Sbjct:   167 ETDFLKPYGTQLIESYKNPVVVHHPKGHTVPRLDEKSLEKVTAFIDTLE 215


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.141   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       51        51   0.00091  102 3  11 22  0.37    27
                                                     29  0.44    26


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  403 (43 KB)
  Total size of DFA:  66 KB (2060 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  5.72u 0.18s 5.90t   Elapsed:  00:00:01
  Total cpu time:  5.72u 0.18s 5.90t   Elapsed:  00:00:01
  Start:  Fri May 10 23:03:27 2013   End:  Fri May 10 23:03:28 2013

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