Query 040515
Match_columns 251
No_of_seqs 220 out of 1593
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 09:12:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040515.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040515hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK14691 3-oxoacyl-(acyl carri 100.0 6.1E-56 1.3E-60 376.4 25.5 246 1-250 82-340 (342)
2 PLN02787 3-oxoacyl-[acyl-carri 100.0 4.8E-55 1E-59 388.7 24.9 247 1-251 282-540 (540)
3 COG0304 FabB 3-oxoacyl-(acyl-c 100.0 1.1E-54 2.4E-59 373.1 24.1 247 1-251 153-412 (412)
4 KOG1394 3-oxoacyl-(acyl-carrie 100.0 1.3E-55 2.8E-60 358.5 15.5 248 1-251 178-440 (440)
5 PRK08722 3-oxoacyl-(acyl carri 100.0 5.4E-54 1.2E-58 374.9 26.6 247 1-250 155-414 (414)
6 PRK07910 3-oxoacyl-(acyl carri 100.0 6.6E-54 1.4E-58 374.5 26.0 244 1-250 162-418 (418)
7 PRK06333 3-oxoacyl-(acyl carri 100.0 2.7E-53 5.8E-58 373.4 25.9 247 1-251 164-423 (424)
8 PLN02836 3-oxoacyl-[acyl-carri 100.0 4.4E-53 9.5E-58 372.0 26.6 251 1-251 175-437 (437)
9 PTZ00050 3-oxoacyl-acyl carrie 100.0 1.9E-52 4.1E-57 366.8 26.8 249 1-250 159-421 (421)
10 PRK07967 3-oxoacyl-(acyl carri 100.0 4.6E-52 1E-56 361.1 25.6 240 1-251 153-405 (406)
11 TIGR02813 omega_3_PfaA polyket 100.0 4.7E-52 1E-56 415.7 25.9 244 1-250 197-462 (2582)
12 PRK07314 3-oxoacyl-(acyl carri 100.0 4.8E-51 1E-55 358.0 25.9 247 1-251 153-411 (411)
13 cd00832 CLF Chain-length facto 100.0 7.2E-51 1.6E-55 354.1 24.9 236 1-247 152-399 (399)
14 PRK09116 3-oxoacyl-(acyl carri 100.0 9.4E-51 2E-55 353.6 24.5 238 1-248 155-405 (405)
15 PRK08439 3-oxoacyl-(acyl carri 100.0 1.4E-50 3.1E-55 353.4 25.7 242 1-250 153-406 (406)
16 PRK05952 3-oxoacyl-(acyl carri 100.0 9.3E-51 2E-55 350.0 24.0 233 1-249 137-381 (381)
17 COG3321 Polyketide synthase mo 100.0 2.8E-51 6.1E-56 389.0 22.3 245 1-251 165-428 (1061)
18 PRK06501 3-oxoacyl-(acyl carri 100.0 1.8E-49 3.8E-54 348.0 26.3 247 1-251 166-424 (425)
19 TIGR03150 fabF beta-ketoacyl-a 100.0 3E-49 6.6E-54 346.4 25.9 244 1-248 152-407 (407)
20 cd00828 elong_cond_enzymes "el 100.0 2.2E-48 4.8E-53 340.9 24.7 241 1-247 153-407 (407)
21 cd00834 KAS_I_II Beta-ketoacyl 100.0 3E-47 6.5E-52 333.8 24.6 243 1-247 152-406 (406)
22 PRK07103 polyketide beta-ketoa 100.0 5E-47 1.1E-51 331.5 25.2 239 1-249 158-410 (410)
23 PRK09185 3-oxoacyl-(acyl carri 100.0 6.3E-46 1.4E-50 322.8 23.2 237 1-251 151-392 (392)
24 smart00825 PKS_KS Beta-ketoacy 100.0 1.9E-45 4.1E-50 324.0 25.3 243 1-250 161-424 (424)
25 cd00833 PKS polyketide synthas 100.0 9.3E-44 2E-48 313.0 25.0 240 1-247 161-421 (421)
26 KOG1202 Animal-type fatty acid 100.0 1.4E-42 3E-47 314.9 16.0 240 1-249 161-415 (2376)
27 PRK06519 3-oxoacyl-(acyl carri 100.0 5.7E-41 1.2E-45 290.3 22.2 215 1-249 166-396 (398)
28 cd00825 decarbox_cond_enzymes 100.0 1.7E-32 3.6E-37 234.4 25.2 234 1-247 87-332 (332)
29 PRK06147 3-oxoacyl-(acyl carri 100.0 1.5E-30 3.3E-35 222.7 20.2 215 1-249 124-342 (348)
30 PF02801 Ketoacyl-synt_C: Beta 100.0 6.2E-30 1.3E-34 186.3 7.9 118 90-207 1-119 (119)
31 cd00327 cond_enzymes Condensin 99.9 1.7E-24 3.7E-29 178.2 19.1 193 1-247 59-254 (254)
32 PRK13359 beta-ketoadipyl CoA t 99.9 3E-23 6.4E-28 180.1 15.5 128 78-250 266-400 (400)
33 PRK06633 acetyl-CoA acetyltran 99.9 3.6E-23 7.7E-28 179.0 15.2 130 78-250 260-392 (392)
34 TIGR02430 pcaF beta-ketoadipyl 99.9 5E-23 1.1E-27 178.7 13.2 133 78-250 266-400 (400)
35 PRK07516 acetyl-CoA acetyltran 99.9 1.8E-22 3.8E-27 175.7 15.7 223 2-251 77-389 (389)
36 PRK12578 acetyl-CoA acetyltran 99.9 2.4E-22 5.3E-27 174.7 16.2 223 2-249 74-385 (385)
37 PRK09050 beta-ketoadipyl CoA t 99.9 3.6E-22 7.9E-27 173.5 16.4 128 78-250 267-401 (401)
38 PRK05656 acetyl-CoA acetyltran 99.9 5.5E-22 1.2E-26 172.5 17.1 132 78-249 261-392 (393)
39 PRK06064 acetyl-CoA acetyltran 99.9 8.5E-22 1.8E-26 171.6 18.1 226 1-250 76-388 (389)
40 PRK09052 acetyl-CoA acetyltran 99.9 1.2E-21 2.6E-26 170.2 17.9 131 78-250 267-399 (399)
41 PRK09051 beta-ketothiolase; Pr 99.9 4.2E-21 9E-26 166.8 18.5 131 78-250 262-394 (394)
42 TIGR02445 fadA fatty oxidation 99.9 1.7E-21 3.6E-26 168.8 15.5 133 78-250 250-385 (385)
43 PRK08131 acetyl-CoA acetyltran 99.9 1.3E-21 2.9E-26 170.0 14.5 130 78-250 266-400 (401)
44 PRK07661 acetyl-CoA acetyltran 99.9 2.4E-21 5.1E-26 168.1 16.1 129 78-249 259-390 (391)
45 cd00751 thiolase Thiolase are 99.9 1.5E-21 3.2E-26 169.8 14.9 132 78-249 255-386 (386)
46 PRK07108 acetyl-CoA acetyltran 99.9 2E-21 4.3E-26 168.7 15.6 129 78-249 260-391 (392)
47 PRK06365 acetyl-CoA acetyltran 99.9 8.2E-21 1.8E-25 166.6 18.0 229 2-251 91-430 (430)
48 PRK08947 fadA 3-ketoacyl-CoA t 99.9 4.3E-21 9.3E-26 166.4 15.3 133 78-250 252-387 (387)
49 PRK08242 acetyl-CoA acetyltran 99.9 3.2E-21 7E-26 167.2 14.2 130 78-250 270-402 (402)
50 PRK08256 lipid-transfer protei 99.9 7.2E-21 1.6E-25 165.8 16.1 223 2-249 72-390 (391)
51 PRK07850 acetyl-CoA acetyltran 99.9 3.9E-21 8.5E-26 166.6 13.9 131 78-250 255-387 (387)
52 PRK06954 acetyl-CoA acetyltran 99.9 8.5E-21 1.8E-25 165.2 15.7 129 78-249 265-396 (397)
53 PLN02287 3-ketoacyl-CoA thiola 99.9 6.5E-21 1.4E-25 167.6 14.6 133 78-251 301-436 (452)
54 PRK05790 putative acyltransfer 99.9 6.7E-21 1.4E-25 166.1 14.6 133 78-250 261-393 (393)
55 PTZ00455 3-ketoacyl-CoA thiola 99.9 2.2E-20 4.8E-25 163.8 17.7 222 2-249 112-437 (438)
56 PRK06445 acetyl-CoA acetyltran 99.9 8.4E-21 1.8E-25 165.3 14.9 130 78-249 262-393 (394)
57 PRK08963 fadI 3-ketoacyl-CoA t 99.9 6.1E-21 1.3E-25 167.5 13.1 136 78-249 278-427 (428)
58 TIGR01930 AcCoA-C-Actrans acet 99.8 1.2E-20 2.6E-25 164.0 13.5 131 78-248 256-386 (386)
59 PRK06158 thiolase; Provisional 99.8 6.3E-20 1.4E-24 159.3 17.9 145 78-249 219-380 (384)
60 PRK06059 lipid-transfer protei 99.8 3.4E-20 7.4E-25 161.9 16.1 223 2-249 77-399 (399)
61 PRK06289 acetyl-CoA acetyltran 99.8 2.4E-20 5.2E-25 163.0 15.0 222 2-248 82-402 (403)
62 PRK06157 acetyl-CoA acetyltran 99.8 3E-20 6.5E-25 161.9 15.2 212 2-238 80-383 (398)
63 PRK06504 acetyl-CoA acetyltran 99.8 1.8E-20 3.8E-25 162.4 13.4 131 78-250 258-390 (390)
64 PRK06205 acetyl-CoA acetyltran 99.8 4.5E-20 9.7E-25 161.1 16.0 134 78-251 268-404 (404)
65 PRK06366 acetyl-CoA acetyltran 99.8 1.5E-20 3.1E-25 163.4 12.8 130 78-251 255-388 (388)
66 cd00829 SCP-x_thiolase Thiolas 99.8 2.5E-20 5.4E-25 161.9 14.1 218 2-245 69-373 (375)
67 PRK08313 acetyl-CoA acetyltran 99.8 7.5E-20 1.6E-24 158.8 16.7 223 2-249 78-383 (386)
68 cd00826 nondecarbox_cond_enzym 99.8 8.4E-20 1.8E-24 158.8 16.5 220 2-248 77-392 (393)
69 PRK06065 acetyl-CoA acetyltran 99.8 1.6E-19 3.4E-24 156.6 18.2 220 2-248 83-391 (392)
70 TIGR02446 FadI fatty oxidation 99.8 2.4E-20 5.2E-25 163.4 12.8 136 78-249 280-429 (430)
71 PRK07851 acetyl-CoA acetyltran 99.8 4E-20 8.7E-25 161.3 13.9 130 78-250 273-405 (406)
72 PLN02644 acetyl-CoA C-acetyltr 99.8 8.1E-20 1.8E-24 159.0 14.6 134 78-251 261-394 (394)
73 PRK06690 acetyl-CoA acetyltran 99.8 3.6E-19 7.8E-24 152.4 18.2 207 2-251 74-361 (361)
74 PRK08235 acetyl-CoA acetyltran 99.8 7.2E-20 1.6E-24 159.1 13.8 132 78-249 261-392 (393)
75 PRK08142 acetyl-CoA acetyltran 99.8 1.8E-19 3.9E-24 156.0 15.5 223 2-249 74-387 (388)
76 PRK07801 acetyl-CoA acetyltran 99.8 1.4E-19 3E-24 157.2 14.6 130 78-249 250-381 (382)
77 PRK06066 acetyl-CoA acetyltran 99.8 3.7E-19 8.1E-24 153.6 16.3 145 78-249 221-385 (385)
78 KOG1390 Acetyl-CoA acetyltrans 99.8 2.8E-20 6E-25 150.4 7.6 105 78-197 264-371 (396)
79 PRK06025 acetyl-CoA acetyltran 99.8 2.9E-19 6.4E-24 154.6 14.4 130 78-250 285-417 (417)
80 PRK08170 acetyl-CoA acetyltran 99.8 3.1E-19 6.7E-24 156.8 13.7 136 78-250 277-426 (426)
81 PRK09268 acetyl-CoA acetyltran 99.8 8.6E-19 1.9E-23 153.6 14.9 141 78-249 275-427 (427)
82 KOG1406 Peroxisomal 3-ketoacyl 99.8 1.7E-18 3.6E-23 137.2 8.1 221 2-247 79-396 (408)
83 KOG1389 3-oxoacyl CoA thiolase 99.7 1.5E-17 3.2E-22 134.4 7.7 103 80-197 292-397 (435)
84 COG0183 PaaJ Acetyl-CoA acetyl 99.7 9E-17 2E-21 139.6 9.2 44 2-45 84-127 (392)
85 PRK07855 lipid-transfer protei 99.7 1.4E-15 3.1E-20 132.0 14.2 139 78-247 226-385 (386)
86 PRK07937 lipid-transfer protei 99.6 7.6E-15 1.6E-19 125.7 15.6 132 78-249 215-350 (352)
87 KOG1391 Acetyl-CoA acetyltrans 99.6 5.8E-16 1.3E-20 122.4 7.5 130 78-250 263-395 (396)
88 PRK08257 acetyl-CoA acetyltran 99.6 1.5E-14 3.2E-19 129.2 17.3 137 78-249 253-397 (498)
89 PF02803 Thiolase_C: Thiolase, 99.6 7.1E-16 1.5E-20 111.5 5.9 119 88-249 2-123 (123)
90 KOG1392 Acetyl-CoA acetyltrans 99.6 6.4E-16 1.4E-20 124.0 3.9 131 78-251 313-464 (465)
91 PRK07515 3-oxoacyl-(acyl carri 99.4 1E-12 2.2E-17 114.1 8.9 198 1-249 146-371 (372)
92 PF00109 ketoacyl-synt: Beta-k 99.4 1.4E-12 2.9E-17 107.4 7.6 75 1-81 167-241 (254)
93 PRK09352 3-oxoacyl-(acyl carri 99.2 7.1E-11 1.5E-15 100.5 10.9 189 2-248 105-317 (319)
94 TIGR00747 fabH 3-oxoacyl-(acyl 99.2 2.2E-10 4.9E-15 97.4 12.7 190 2-248 104-317 (318)
95 PRK07204 3-oxoacyl-(acyl carri 99.2 3E-10 6.5E-15 97.1 13.1 194 2-248 107-328 (329)
96 PRK12879 3-oxoacyl-(acyl carri 99.1 3.7E-09 8.1E-14 90.2 13.8 194 2-248 106-323 (325)
97 COG0332 FabH 3-oxoacyl-[acyl-c 99.0 2.4E-09 5.2E-14 89.9 11.2 194 2-249 105-322 (323)
98 cd00830 KAS_III Ketoacyl-acyl 99.0 2.3E-09 5E-14 91.2 10.4 188 2-246 103-319 (320)
99 PRK09258 3-oxoacyl-(acyl carri 99.0 5.8E-09 1.3E-13 89.5 11.6 205 2-248 115-337 (338)
100 PRK06816 3-oxoacyl-(acyl carri 99.0 3.3E-08 7.3E-13 86.0 15.9 72 2-77 116-188 (378)
101 CHL00203 fabH 3-oxoacyl-acyl-c 99.0 1.2E-08 2.6E-13 87.1 12.8 189 2-248 103-324 (326)
102 PLN02326 3-oxoacyl-[acyl-carri 98.9 1.4E-08 3E-13 88.5 12.6 191 2-248 148-378 (379)
103 PRK06840 hypothetical protein; 98.8 4.2E-08 9.1E-13 84.2 11.5 190 2-248 107-334 (339)
104 TIGR00748 HMG_CoA_syn_Arc hydr 98.7 4.7E-07 1E-11 77.9 15.3 187 2-248 104-306 (345)
105 cd00827 init_cond_enzymes "ini 98.7 3.9E-08 8.4E-13 83.8 8.2 43 2-44 101-143 (324)
106 PRK04262 hypothetical protein; 98.7 5.5E-07 1.2E-11 77.6 13.4 187 2-248 105-307 (347)
107 PRK05963 3-oxoacyl-(acyl carri 98.5 1.3E-06 2.9E-11 74.6 11.9 39 2-41 105-143 (326)
108 PF00108 Thiolase_N: Thiolase, 98.5 1.4E-07 3E-12 78.0 3.8 43 2-44 80-122 (264)
109 TIGR01835 HMG-CoA-S_prok 3-hyd 98.3 1.8E-05 3.9E-10 69.0 14.2 38 2-39 101-138 (379)
110 cd00831 CHS_like Chalcone and 98.2 3.3E-06 7.2E-11 73.1 7.7 40 3-42 139-179 (361)
111 TIGR02845 spore_V_AD stage V s 98.2 1.3E-05 2.8E-10 67.1 9.6 143 2-159 97-243 (327)
112 PRK12880 3-oxoacyl-(acyl carri 98.1 3.3E-05 7.1E-10 66.7 11.3 39 2-41 114-152 (353)
113 PLN03172 chalcone synthase fam 98.0 0.00014 2.9E-09 63.7 12.2 208 4-250 158-387 (393)
114 PRK08304 stage V sporulation p 97.9 8.1E-05 1.8E-09 62.6 9.7 143 2-159 103-249 (337)
115 PLN03169 chalcone synthase fam 97.9 3E-05 6.5E-10 67.9 7.3 38 3-40 161-198 (391)
116 COG3425 PksG 3-hydroxy-3-methy 97.9 0.00038 8.2E-09 59.5 13.1 160 5-192 108-282 (377)
117 PLN03171 chalcone synthase-lik 97.8 0.00013 2.8E-09 64.0 9.8 38 4-41 164-201 (399)
118 PLN03170 chalcone synthase; Pr 97.8 0.00013 2.9E-09 63.9 8.9 210 3-250 161-391 (401)
119 PLN02854 3-ketoacyl-CoA syntha 97.7 0.00038 8.2E-09 62.6 11.1 39 3-41 242-281 (521)
120 PF08541 ACP_syn_III_C: 3-Oxoa 97.7 0.00014 3.1E-09 49.7 6.8 89 123-248 1-89 (90)
121 PLN03173 chalcone synthase; Pr 97.6 0.00015 3.2E-09 63.4 6.6 38 4-41 158-195 (391)
122 PF08545 ACP_syn_III: 3-Oxoacy 97.5 0.00014 3E-09 48.7 3.9 39 4-42 1-39 (80)
123 PRK12404 stage V sporulation p 97.5 0.0021 4.6E-08 53.9 11.3 139 2-160 101-248 (334)
124 PLN02577 hydroxymethylglutaryl 97.3 0.0015 3.2E-08 58.1 8.8 39 2-40 109-149 (459)
125 PLN03168 chalcone synthase; Pr 97.3 0.0012 2.6E-08 57.8 8.0 39 3-41 156-194 (389)
126 PLN02377 3-ketoacyl-CoA syntha 97.2 0.003 6.6E-08 56.7 10.1 39 3-41 226-265 (502)
127 COG3424 BcsA Predicted naringe 95.4 0.14 3E-06 42.7 8.7 130 7-150 135-288 (356)
128 PLN02932 3-ketoacyl-CoA syntha 94.6 0.045 9.8E-07 49.0 4.2 41 3-43 202-243 (478)
129 PLN02192 3-ketoacyl-CoA syntha 94.3 0.051 1.1E-06 49.0 3.9 40 2-41 229-269 (511)
130 TIGR01833 HMG-CoA-S_euk 3-hydr 93.1 0.12 2.6E-06 46.1 4.1 37 3-39 107-145 (454)
131 PRK06065 acetyl-CoA acetyltran 92.0 0.99 2.1E-05 39.7 8.4 99 91-200 11-110 (392)
132 PRK12578 acetyl-CoA acetyltran 91.3 1 2.2E-05 39.5 7.7 98 91-200 3-101 (385)
133 PLN00415 3-ketoacyl-CoA syntha 91.2 0.29 6.4E-06 43.6 4.2 39 3-41 188-227 (466)
134 PRK08170 acetyl-CoA acetyltran 91.0 1.9 4.1E-05 38.4 9.2 101 91-200 5-108 (426)
135 PRK06059 lipid-transfer protei 91.0 1.9 4E-05 38.0 9.1 98 91-200 6-104 (399)
136 PRK06158 thiolase; Provisional 90.8 1.8 3.8E-05 38.0 8.7 94 91-199 10-103 (384)
137 PRK05790 putative acyltransfer 90.3 2.2 4.9E-05 37.4 9.0 101 91-200 4-107 (393)
138 PF07451 SpoVAD: Stage V sporu 89.8 0.84 1.8E-05 38.2 5.4 138 2-161 98-246 (329)
139 PRK06205 acetyl-CoA acetyltran 89.4 3.4 7.4E-05 36.5 9.4 101 91-200 4-107 (404)
140 PRK06157 acetyl-CoA acetyltran 89.3 2 4.4E-05 37.8 7.9 98 91-200 9-107 (398)
141 PRK08304 stage V sporulation p 89.3 1.5 3.2E-05 37.4 6.6 75 112-201 57-131 (337)
142 cd00327 cond_enzymes Condensin 89.2 3.8 8.1E-05 33.2 9.1 78 113-199 9-86 (254)
143 PRK09051 beta-ketothiolase; Pr 88.9 4 8.6E-05 36.0 9.4 80 112-200 28-109 (394)
144 PLN02644 acetyl-CoA C-acetyltr 88.8 3.4 7.5E-05 36.3 9.0 81 112-200 26-106 (394)
145 TIGR02845 spore_V_AD stage V s 88.6 1.7 3.6E-05 37.0 6.4 74 113-201 52-125 (327)
146 PF13723 Ketoacyl-synt_2: Beta 88.3 0.8 1.7E-05 36.7 4.2 42 1-43 105-146 (218)
147 PRK07801 acetyl-CoA acetyltran 88.2 3.9 8.5E-05 35.8 8.9 78 112-200 27-108 (382)
148 PRK06954 acetyl-CoA acetyltran 88.2 3.9 8.4E-05 36.0 8.9 81 112-200 32-112 (397)
149 PRK08256 lipid-transfer protei 88.0 2.1 4.6E-05 37.5 7.2 97 91-201 3-100 (391)
150 PRK06365 acetyl-CoA acetyltran 87.9 1.7 3.7E-05 38.7 6.6 98 91-199 18-117 (430)
151 PRK08235 acetyl-CoA acetyltran 87.7 3.4 7.4E-05 36.4 8.2 80 112-200 27-107 (393)
152 CHL00203 fabH 3-oxoacyl-acyl-c 87.4 2.2 4.7E-05 36.4 6.7 79 112-200 52-130 (326)
153 PRK08313 acetyl-CoA acetyltran 87.0 3.5 7.7E-05 36.1 8.0 98 91-199 5-104 (386)
154 PLN02932 3-ketoacyl-CoA syntha 87.0 1.7 3.8E-05 39.1 6.0 77 114-198 151-227 (478)
155 PRK08142 acetyl-CoA acetyltran 86.8 5.4 0.00012 35.1 8.9 95 91-200 7-101 (388)
156 TIGR00747 fabH 3-oxoacyl-(acyl 86.5 3.6 7.7E-05 34.8 7.5 79 112-199 52-130 (318)
157 PRK07937 lipid-transfer protei 86.4 5 0.00011 34.8 8.4 46 91-137 4-50 (352)
158 PRK05656 acetyl-CoA acetyltran 86.3 5.1 0.00011 35.2 8.6 100 91-200 4-107 (393)
159 PRK12404 stage V sporulation p 86.3 2 4.3E-05 36.5 5.6 74 113-201 56-129 (334)
160 PRK09052 acetyl-CoA acetyltran 86.2 6.6 0.00014 34.7 9.2 81 112-200 32-114 (399)
161 PF00108 Thiolase_N: Thiolase, 86.1 2.7 5.8E-05 34.8 6.4 79 113-200 28-107 (264)
162 PF01154 HMG_CoA_synt_N: Hydro 86.1 1.1 2.5E-05 34.4 3.8 36 4-39 111-148 (174)
163 PRK09258 3-oxoacyl-(acyl carri 86.0 3.8 8.3E-05 35.0 7.6 80 112-199 62-141 (338)
164 PLN03168 chalcone synthase; Pr 86.0 2.9 6.4E-05 36.7 6.9 75 115-198 105-180 (389)
165 PLN02287 3-ketoacyl-CoA thiola 85.9 5.7 0.00012 35.7 8.8 100 91-199 48-152 (452)
166 PLN02377 3-ketoacyl-CoA syntha 85.9 3.8 8.2E-05 37.2 7.6 76 115-198 176-251 (502)
167 PRK06445 acetyl-CoA acetyltran 85.9 2.5 5.4E-05 37.2 6.4 80 112-200 33-114 (394)
168 TIGR01930 AcCoA-C-Actrans acet 85.9 3.7 7.9E-05 36.0 7.4 80 112-200 22-102 (386)
169 PRK06366 acetyl-CoA acetyltran 85.7 5.7 0.00012 34.9 8.6 80 112-200 27-107 (388)
170 COG0533 QRI7 Metal-dependent p 85.6 2.1 4.5E-05 36.6 5.4 66 113-182 52-118 (342)
171 PRK12880 3-oxoacyl-(acyl carri 85.6 3 6.5E-05 36.1 6.7 79 112-199 61-140 (353)
172 PRK07204 3-oxoacyl-(acyl carri 85.5 5.4 0.00012 34.0 8.2 80 112-199 53-133 (329)
173 PRK07851 acetyl-CoA acetyltran 85.5 3 6.5E-05 36.9 6.7 79 112-200 28-109 (406)
174 PRK07855 lipid-transfer protei 84.6 7 0.00015 34.3 8.6 93 91-199 6-99 (386)
175 PRK06066 acetyl-CoA acetyltran 84.6 8.3 0.00018 33.9 9.0 94 91-199 6-103 (385)
176 PRK09352 3-oxoacyl-(acyl carri 84.5 4.9 0.00011 34.0 7.5 78 112-199 53-131 (319)
177 PRK06504 acetyl-CoA acetyltran 84.4 8.1 0.00018 34.0 8.9 81 112-200 27-108 (390)
178 PRK09268 acetyl-CoA acetyltran 84.1 5.3 0.00011 35.6 7.7 80 112-200 32-112 (427)
179 cd00751 thiolase Thiolase are 84.0 7 0.00015 34.2 8.4 80 112-200 23-103 (386)
180 PRK12879 3-oxoacyl-(acyl carri 84.0 5.1 0.00011 34.0 7.3 78 112-199 54-132 (325)
181 PF08392 FAE1_CUT1_RppA: FAE1/ 83.8 1.1 2.3E-05 37.5 2.9 35 7-41 142-176 (290)
182 PRK08131 acetyl-CoA acetyltran 83.6 8.5 0.00018 34.0 8.7 82 112-200 27-108 (401)
183 PLN02192 3-ketoacyl-CoA syntha 83.5 4.8 0.0001 36.6 7.2 76 115-198 180-255 (511)
184 PRK08963 fadI 3-ketoacyl-CoA t 83.5 11 0.00025 33.5 9.6 79 113-200 31-110 (428)
185 cd00831 CHS_like Chalcone and 83.4 3.7 8E-05 35.5 6.3 78 113-198 87-164 (361)
186 PRK06816 3-oxoacyl-(acyl carri 83.1 5.1 0.00011 35.0 7.1 78 112-199 64-142 (378)
187 PRK04262 hypothetical protein; 83.1 4.1 8.8E-05 35.1 6.4 79 112-199 52-131 (347)
188 TIGR00748 HMG_CoA_syn_Arc hydr 82.8 4.9 0.00011 34.7 6.8 79 112-199 51-130 (345)
189 PLN02326 3-oxoacyl-[acyl-carri 82.6 4.5 9.8E-05 35.3 6.6 78 112-199 97-174 (379)
190 PRK07850 acetyl-CoA acetyltran 82.5 9.4 0.0002 33.5 8.5 79 112-200 27-108 (387)
191 cd00826 nondecarbox_cond_enzym 82.4 5.9 0.00013 34.9 7.2 79 112-200 24-104 (393)
192 TIGR02446 FadI fatty oxidation 81.8 10 0.00022 33.8 8.6 99 91-200 9-112 (430)
193 PRK07515 3-oxoacyl-(acyl carri 81.7 6.8 0.00015 34.1 7.4 77 113-200 97-174 (372)
194 PLN03172 chalcone synthase fam 81.4 7.1 0.00015 34.4 7.4 74 115-198 106-181 (393)
195 COG0332 FabH 3-oxoacyl-[acyl-c 81.3 1 2.3E-05 38.3 2.1 28 112-139 53-80 (323)
196 cd00827 init_cond_enzymes "ini 81.0 7.5 0.00016 32.8 7.3 78 112-199 49-127 (324)
197 PLN00415 3-ketoacyl-CoA syntha 80.9 8.4 0.00018 34.6 7.6 77 114-198 137-213 (466)
198 PRK07108 acetyl-CoA acetyltran 80.9 6 0.00013 34.8 6.7 81 112-200 28-109 (392)
199 cd00829 SCP-x_thiolase Thiolas 80.7 7.2 0.00016 33.9 7.2 78 112-199 17-95 (375)
200 PRK06840 hypothetical protein; 80.5 8 0.00017 33.1 7.3 76 112-197 54-131 (339)
201 PRK06064 acetyl-CoA acetyltran 80.4 9.7 0.00021 33.4 7.9 79 112-200 23-104 (389)
202 PRK06633 acetyl-CoA acetyltran 80.3 6 0.00013 34.8 6.5 79 113-200 29-108 (392)
203 PF09663 Amido_AtzD_TrzD: Amid 80.1 3.8 8.3E-05 34.8 4.9 70 113-192 132-202 (365)
204 PLN03170 chalcone synthase; Pr 79.9 5.1 0.00011 35.4 6.0 29 114-142 109-138 (401)
205 PLN03173 chalcone synthase; Pr 79.9 5.4 0.00012 35.1 6.1 24 116-139 107-130 (391)
206 TIGR02714 amido_AtzD_TrzD ring 79.9 3.9 8.4E-05 34.7 4.8 70 113-192 133-203 (366)
207 KOG2708 Predicted metalloprote 79.7 4.1 8.8E-05 32.9 4.7 24 115-138 53-76 (336)
208 cd00830 KAS_III Ketoacyl-acyl 79.6 9 0.00019 32.3 7.3 78 112-199 51-129 (320)
209 PRK08257 acetyl-CoA acetyltran 79.4 14 0.0003 33.7 8.7 99 91-200 6-108 (498)
210 PRK07516 acetyl-CoA acetyltran 79.4 8.1 0.00018 33.9 7.1 80 112-200 23-104 (389)
211 PRK05963 3-oxoacyl-(acyl carri 79.4 9.5 0.00021 32.4 7.4 32 112-144 53-84 (326)
212 PLN03171 chalcone synthase-lik 79.3 4.9 0.00011 35.4 5.7 30 114-144 111-140 (399)
213 PLN03169 chalcone synthase fam 77.3 5.8 0.00013 34.9 5.5 26 114-139 109-134 (391)
214 cd00825 decarbox_cond_enzymes 75.8 20 0.00043 30.3 8.3 27 112-138 12-42 (332)
215 PRK07661 acetyl-CoA acetyltran 75.2 19 0.00041 31.7 8.2 79 113-200 29-109 (391)
216 PRK08242 acetyl-CoA acetyltran 75.0 25 0.00054 31.1 8.8 78 113-200 30-110 (402)
217 PRK09050 beta-ketoadipyl CoA t 74.2 24 0.00052 31.2 8.6 79 113-200 28-109 (401)
218 TIGR02430 pcaF beta-ketoadipyl 73.6 25 0.00054 31.1 8.5 80 113-200 27-108 (400)
219 PRK06289 acetyl-CoA acetyltran 72.9 6.3 0.00014 34.8 4.7 48 91-138 5-53 (403)
220 PF00195 Chal_sti_synt_N: Chal 71.8 4.7 0.0001 32.6 3.3 36 6-41 158-193 (226)
221 PF02797 Chal_sti_synt_C: Chal 71.0 42 0.00091 25.2 9.0 109 113-250 40-150 (151)
222 PF00195 Chal_sti_synt_N: Chal 69.7 13 0.00027 30.1 5.3 74 115-197 104-178 (226)
223 PLN02854 3-ketoacyl-CoA syntha 69.1 20 0.00042 32.9 6.9 74 117-198 194-267 (521)
224 TIGR02445 fadA fatty oxidation 69.1 41 0.00088 29.6 8.8 80 113-200 27-108 (385)
225 PF07451 SpoVAD: Stage V sporu 68.9 5.3 0.00011 33.7 3.0 28 113-140 53-80 (329)
226 PTZ00340 O-sialoglycoprotein e 68.8 9.4 0.0002 33.0 4.6 65 113-181 51-116 (345)
227 PTZ00455 3-ketoacyl-CoA thiola 67.5 18 0.00039 32.4 6.3 83 113-200 50-139 (438)
228 PRK09585 anmK anhydro-N-acetyl 66.1 8.5 0.00018 33.5 3.9 29 112-140 70-98 (365)
229 PF08392 FAE1_CUT1_RppA: FAE1/ 65.6 5.5 0.00012 33.4 2.5 27 114-140 86-112 (290)
230 PRK14878 UGMP family protein; 65.6 11 0.00023 32.3 4.4 32 114-145 47-79 (323)
231 COG3360 Uncharacterized conser 61.6 6.4 0.00014 25.0 1.7 27 114-140 18-44 (71)
232 PRK13359 beta-ketoadipyl CoA t 61.4 58 0.0013 28.8 8.3 78 113-200 28-109 (400)
233 PRK08947 fadA 3-ketoacyl-CoA t 61.2 36 0.00078 29.9 7.0 79 113-200 29-110 (387)
234 TIGR00329 gcp_kae1 metallohydr 58.9 17 0.00037 30.8 4.4 41 113-153 50-91 (305)
235 KOG2707 Predicted metalloprote 58.6 24 0.00053 30.4 5.1 40 113-152 84-124 (405)
236 TIGR03722 arch_KAE1 universal 57.7 15 0.00033 31.3 4.0 26 114-139 48-73 (322)
237 PF01890 CbiG_C: Cobalamin syn 57.4 22 0.00047 25.6 4.2 40 92-139 2-41 (121)
238 COG3424 BcsA Predicted naringe 56.9 26 0.00056 29.7 4.9 71 114-192 79-152 (356)
239 TIGR01833 HMG-CoA-S_euk 3-hydr 56.7 75 0.0016 28.7 8.3 80 113-199 52-132 (454)
240 PRK09604 UGMP family protein; 55.0 22 0.00048 30.5 4.5 38 113-150 53-91 (332)
241 PRK06147 3-oxoacyl-(acyl carri 55.0 96 0.0021 26.7 8.5 82 113-202 67-154 (348)
242 PRK06025 acetyl-CoA acetyltran 54.0 43 0.00093 29.8 6.2 76 114-200 32-111 (417)
243 PRK09605 bifunctional UGMP fam 51.6 24 0.00052 32.4 4.5 32 113-144 50-82 (535)
244 PLN02577 hydroxymethylglutaryl 50.3 11 0.00025 33.8 2.1 31 113-144 55-85 (459)
245 PRK07027 cobalamin biosynthesi 50.1 31 0.00067 25.0 4.0 39 93-139 5-43 (126)
246 PF04422 FrhB_FdhB_N: Coenzyme 48.3 25 0.00054 23.3 3.0 32 7-38 14-45 (82)
247 PF03702 UPF0075: Uncharacteri 47.2 19 0.00041 31.4 2.9 29 112-140 67-95 (364)
248 TIGR03150 fabF beta-ketoacyl-a 43.7 1.2E+02 0.0025 26.6 7.4 23 179-201 159-181 (407)
249 PRK07314 3-oxoacyl-(acyl carri 41.0 1.4E+02 0.003 26.2 7.5 23 179-201 160-182 (411)
250 PF00814 Peptidase_M22: Glycop 40.7 20 0.00043 29.7 2.0 42 113-154 31-73 (268)
251 KOG3605 Beta amyloid precursor 40.4 30 0.00064 32.4 3.1 46 112-157 596-645 (829)
252 TIGR03723 bact_gcp putative gl 40.1 52 0.0011 28.0 4.5 63 113-179 51-114 (314)
253 COG0161 BioA Adenosylmethionin 39.5 69 0.0015 28.8 5.2 94 118-211 89-183 (449)
254 smart00825 PKS_KS Beta-ketoacy 39.2 91 0.002 27.4 6.1 22 180-201 169-190 (424)
255 COG2971 Predicted N-acetylgluc 38.7 36 0.00078 28.7 3.2 28 112-139 48-75 (301)
256 TIGR01835 HMG-CoA-S_prok 3-hyd 38.3 1.5E+02 0.0034 25.8 7.3 75 113-198 51-126 (379)
257 PF07311 Dodecin: Dodecin; In 37.1 20 0.00044 22.8 1.2 26 114-139 15-40 (66)
258 PF14804 Jag_N: Jag N-terminus 36.2 31 0.00066 20.8 1.8 26 114-139 6-31 (52)
259 PRK05788 cobalamin biosynthesi 36.1 57 0.0012 27.8 4.1 29 111-139 206-234 (315)
260 PF03990 DUF348: Domain of unk 34.9 53 0.0012 18.6 2.6 22 118-139 19-40 (43)
261 TIGR03725 bact_YeaZ universal 33.4 90 0.0019 24.5 4.6 46 112-157 34-80 (202)
262 cd01817 RGS12_RBD Ubiquitin do 33.3 24 0.00053 22.9 1.1 27 112-138 19-45 (73)
263 TIGR03285 methan_mark_14 putat 32.8 55 0.0012 28.5 3.3 27 113-139 67-93 (445)
264 PRK13410 molecular chaperone D 32.2 53 0.0011 31.2 3.6 44 114-159 310-353 (668)
265 TIGR00114 lumazine-synth 6,7-d 30.6 2.2E+02 0.0049 21.0 8.1 79 113-198 16-96 (138)
266 PRK08439 3-oxoacyl-(acyl carri 29.6 3.3E+02 0.0071 24.0 8.0 24 179-202 160-183 (406)
267 KOG0103 Molecular chaperones H 28.8 54 0.0012 30.9 2.9 42 117-160 318-359 (727)
268 cd06155 eu_AANH_C_1 A group of 27.3 1.1E+02 0.0023 21.0 3.7 38 117-159 33-70 (101)
269 PF14574 DUF4445: Domain of un 26.9 66 0.0014 28.6 3.0 40 115-154 310-349 (412)
270 PRK11530 hypothetical protein; 26.4 17 0.00036 27.9 -0.6 18 123-140 156-173 (183)
271 PTZ00050 3-oxoacyl-acyl carrie 25.5 2.4E+02 0.0052 25.0 6.4 23 180-202 167-189 (421)
272 PRK13411 molecular chaperone D 25.5 72 0.0016 30.3 3.2 45 114-160 309-353 (653)
273 PRK00061 ribH 6,7-dimethyl-8-r 25.0 3.1E+02 0.0066 20.7 7.9 79 113-198 28-108 (154)
274 cd00834 KAS_I_II Beta-ketoacyl 24.8 3.7E+02 0.008 23.3 7.5 23 179-201 159-181 (406)
275 PF00885 DMRL_synthase: 6,7-di 24.7 3E+02 0.0064 20.5 6.5 79 113-198 19-99 (144)
276 cd01760 RBD Ubiquitin-like dom 23.8 81 0.0018 20.4 2.3 31 112-142 19-49 (72)
277 PTZ00186 heat shock 70 kDa pre 23.4 1.1E+02 0.0023 29.2 3.9 44 115-160 336-379 (657)
278 PLN02404 6,7-dimethyl-8-ribity 23.3 2.7E+02 0.0058 20.7 5.2 64 113-183 23-88 (141)
279 TIGR02350 prok_dnaK chaperone 22.5 98 0.0021 28.9 3.5 44 114-159 306-349 (595)
280 PLN03184 chloroplast Hsp70; Pr 22.5 95 0.0021 29.6 3.4 44 114-159 347-390 (673)
281 cd00833 PKS polyketide synthas 22.4 4.5E+02 0.0098 22.9 7.6 23 179-201 168-190 (421)
282 PRK05183 hscA chaperone protei 22.3 1.2E+02 0.0026 28.5 4.0 45 114-160 310-354 (616)
283 PF09861 DUF2088: Domain of un 22.0 2.3E+02 0.0049 22.5 5.0 33 113-145 71-103 (204)
284 COG3425 PksG 3-hydroxy-3-methy 22.0 1.2E+02 0.0026 26.6 3.6 46 114-159 54-99 (377)
285 PRK00290 dnaK molecular chaper 21.9 1.1E+02 0.0024 28.7 3.8 44 114-159 308-351 (627)
286 TIGR01991 HscA Fe-S protein as 21.7 1.2E+02 0.0026 28.4 3.9 45 114-160 294-338 (599)
287 CHL00094 dnaK heat shock prote 21.4 1.1E+02 0.0024 28.7 3.7 43 116-160 312-354 (621)
288 KOG0104 Molecular chaperones G 21.3 85 0.0018 30.1 2.7 28 118-145 350-377 (902)
289 KOG1390 Acetyl-CoA acetyltrans 21.0 4.8E+02 0.01 22.6 6.7 77 114-199 33-110 (396)
290 TIGR02706 P_butyryltrans phosp 20.5 1E+02 0.0023 25.9 3.0 25 15-39 74-98 (294)
291 PTZ00009 heat shock 70 kDa pro 20.3 1.1E+02 0.0025 28.9 3.5 44 115-160 315-358 (653)
292 PTZ00400 DnaK-type molecular c 20.2 1.1E+02 0.0025 29.0 3.4 44 115-160 350-393 (663)
293 cd06150 YjgF_YER057c_UK114_lik 20.2 1.6E+02 0.0035 20.2 3.5 38 117-159 36-73 (105)
No 1
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=100.00 E-value=6.1e-56 Score=376.41 Aligned_cols=246 Identities=52% Similarity=0.823 Sum_probs=228.3
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++++++|+|++.||..|+++|++|++|++||||+|..+++..+..|..++.++...+.+|+..|+|||.+++|+
T Consensus 82 Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v~g 161 (342)
T PRK14691 82 GPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARDGFVMG 161 (342)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCCCcccc
Confidence 89999999999999999999999999999999999999999999899999999998655667889999999999999
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++++|+++|.++|++|+|++..+|+.+...+.+++.+..++++++|+++||+|+||||||+|||||+.+|.
T Consensus 162 EGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~ 241 (342)
T PRK14691 162 EGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDL 241 (342)
T ss_pred ceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCH
Confidence 67889999999999999999999998877778889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCC-CCCCCccccCCCCC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIF-NDNFMPLTASKDMP 227 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~-~~~~~~~~~~~~~~ 227 (251)
+|..||+++|+.. .++||++.|+++||+++|+|+++++.++++|++++|||++|+++|+|++ .+++++ ...++.+
T Consensus 242 ~E~~Ai~~~fg~~---~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~-~~~~~~~ 317 (342)
T PRK14691 242 GEINAIKHLFGES---NALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIA-GNAQPHD 317 (342)
T ss_pred HHHHHHHHHhCCC---CCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCccc-CCCccCC
Confidence 9999999999853 2489999999999999999999999999999999999999999999988 477776 4445556
Q ss_pred CcEEEEecccccceeeeeEeeec
Q 040515 228 ISAALSNSFGFGGTNASLLFTKC 250 (251)
Q Consensus 228 ~~~~lv~~~g~gG~~~~~vl~~~ 250 (251)
.+++|+|+|||||+|+++||++|
T Consensus 318 ~~~al~nsfgfGG~n~~lvl~~~ 340 (342)
T PRK14691 318 MTYALSNGFGFAGVNASILLKRW 340 (342)
T ss_pred CCEEEEeCccCCCeeEEEEEeec
Confidence 89999999999999999999987
No 2
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=100.00 E-value=4.8e-55 Score=388.69 Aligned_cols=247 Identities=48% Similarity=0.741 Sum_probs=229.2
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++|+++|+|++.||.+|+++|++|++|++||||+|..+.+..+..|..++.++.. +.+|+..|+|||.+++|+
T Consensus 282 Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~-~~~p~~~~rPFD~~rdGfv~G 360 (540)
T PLN02787 282 GPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQR-NDDPTKASRPWDMNRDGFVMG 360 (540)
T ss_pred CCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhcc-CCCcccccCCcccCCCCcccc
Confidence 8999999999999999999999999999999999999998999999999999998854 556788999999999999
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++++|+++|++||++|+|++.++|+++++.|.+++.++.++|++||+++|++|+|||||++|||||+.+|.
T Consensus 361 EGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~ 440 (540)
T PLN02787 361 EGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATSTKAGDL 440 (540)
T ss_pred cceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPI 228 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
.|..||.++|+.. .++||++.|+++||+++|+|++++++++++|+++.|||++|+++|++.++++++.....++.+.
T Consensus 441 ~E~~Ai~~~Fg~~---~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~~v~~~~~~~~i 517 (540)
T PLN02787 441 KEYQALMRCFGQN---PELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKERLDI 517 (540)
T ss_pred HHHHHHHHHhCCC---CCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccccccccccCCc
Confidence 9999999999853 2489999999999999999999999999999999999999999999999887754234444568
Q ss_pred cEEEEecccccceeeeeEeeecC
Q 040515 229 SAALSNSFGFGGTNASLLFTKCQ 251 (251)
Q Consensus 229 ~~~lv~~~g~gG~~~~~vl~~~~ 251 (251)
+.+|+|+|||||+|+++||++|+
T Consensus 518 r~aL~nSfGFGG~Naslvl~~~~ 540 (540)
T PLN02787 518 KVALSNSFGFGGHNSSILFAPYK 540 (540)
T ss_pred CEEEEeeecCCceeEEEEEEeCC
Confidence 99999999999999999999985
No 3
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-54 Score=373.15 Aligned_cols=247 Identities=57% Similarity=0.918 Sum_probs=234.3
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||++++.++|+||..||..|+++|+.|++|++||||+|..+++.....|..++.++.. +++|...++|||++++||
T Consensus 153 G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~-nd~p~~asrPfd~~RdGfv~g 231 (412)
T COG0304 153 GPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTR-NDDPEKASRPFDKNRDGFVIG 231 (412)
T ss_pred CCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccC-CCCccccCCCCCCCCCCEEEe
Confidence 8999999999999999999999999999999999999999999999999999999988 889999999999999999
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++|+|++||++||++|.|++..+|+++++.|.|++.+..++|+.||++||++|+|||||.+|||+|+.+|.
T Consensus 232 EGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~ 311 (412)
T COG0304 232 EGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTPANDK 311 (412)
T ss_pred cceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccH
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCC-CCCCCCccccCCCCC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPI-FNDNFMPLTASKDMP 227 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~-~~~~~~~~~~~~~~~ 227 (251)
.|..+++++|+..... ++|.+.|+.+||++||+|..+.+.++++|+++++||++|++.|+|+ +++++++ ...+...
T Consensus 312 ~E~~ai~~vfg~~~~~--~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~~~l~~v~-~~~~~~~ 388 (412)
T COG0304 312 AESLAIKRVFGEHAKS--LPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAADLDVVP-NEARTGA 388 (412)
T ss_pred HHHHHHHHHhcccccC--ceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCcccccccccC-Ccccccc
Confidence 9999999999976544 8999999999999999999999999999999999999999999987 6788888 4444344
Q ss_pred CcEEEEecccccceeeeeEeeecC
Q 040515 228 ISAALSNSFGFGGTNASLLFTKCQ 251 (251)
Q Consensus 228 ~~~~lv~~~g~gG~~~~~vl~~~~ 251 (251)
.++++.|+|||||+|+++|+++|+
T Consensus 389 ~~~~lsnsfGFGG~Na~lv~~~~~ 412 (412)
T COG0304 389 VRAALSNSFGFGGTNASLVFKRYQ 412 (412)
T ss_pred eeEEEecccccCCcceEEEEecCC
Confidence 899999999999999999999985
No 4
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-55 Score=358.54 Aligned_cols=248 Identities=65% Similarity=1.009 Sum_probs=233.4
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++++++|++|..+|..|.+.|+.|++|++|+||.|..+.|..+.+|.+.+.|+.+ ++.|...+||||..++||
T Consensus 178 GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~-nd~P~~aSRPfD~~RdGFVmG 256 (440)
T KOG1394|consen 178 GPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTR-NDNPQKASRPFDKKRDGFVMG 256 (440)
T ss_pred CCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhc-CCCccccCCCCccCCCceeec
Confidence 8999999999999999999999999999999999999999999999999999999987 888999999999999999
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++|+|++||++||+++.|++.++|.+|++.|++++.+...+|.++|++|||.|+|||||.+|+|.|+.+|.
T Consensus 257 EGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~ 336 (440)
T KOG1394|consen 257 EGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDA 336 (440)
T ss_pred cceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeeecccccCcCchH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCcccc--C-CC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTA--S-KD 225 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~--~-~~ 225 (251)
+|..|+.++|++.... .+|.+.|+.+||.+||+|.++-+..+++++++++||++|++.|++.++.+++|... + ..
T Consensus 337 aE~~Ai~~vf~~~~~~--~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~d~~~~~~~~~~~~~~ 414 (440)
T KOG1394|consen 337 AEAEAIKRVFGEHNIA--SKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGVDLDYVPLKASEKKGG 414 (440)
T ss_pred HHHHHHHHHhccCCcc--cccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCcccccccccccccccccc
Confidence 9999999999987654 48999999999999999999999999999999999999999999988888655322 2 22
Q ss_pred CCCcEEEEecccccceeeeeEeeecC
Q 040515 226 MPISAALSNSFGFGGTNASLLFTKCQ 251 (251)
Q Consensus 226 ~~~~~~lv~~~g~gG~~~~~vl~~~~ 251 (251)
.+.+.++.|||||||+|+++++.+|+
T Consensus 415 ~~~~valsNSFGFGGtNaSl~fa~~~ 440 (440)
T KOG1394|consen 415 NKVRVALSNSFGFGGTNASLCFAKFK 440 (440)
T ss_pred ccceEEEecccccCCcchhheeeecC
Confidence 45789999999999999999999874
No 5
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=5.4e-54 Score=374.88 Aligned_cols=247 Identities=52% Similarity=0.858 Sum_probs=226.5
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++|+++|+|++.||.+|+++|++|++|++||||+|...++..+..|..++.++.. +.+|+..|+|||.+++|+
T Consensus 155 Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~-~~~p~~~~rpfd~~~~G~~~g 233 (414)
T PRK08722 155 GPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKDRDGFVLG 233 (414)
T ss_pred CCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccC-CCCCccccCcCcCCCCceEee
Confidence 8999999999999999999999999999999999999998899889999999988743 456778999999999999
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++++|+++|+++|++|+|++.++|+.+.+.|.+.+....++++++|+++||+|+||||||+|||||+.+|.
T Consensus 234 EGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~ 313 (414)
T PRK08722 234 DGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDV 313 (414)
T ss_pred ceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCH
Confidence 67889999999999999999999998888888888888999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCC-CC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD-MP 227 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~-~~ 227 (251)
+|..||+++|+... ..++||++.|+++||+++|+|++++++++++|++++|||++|+++|+|.+++++++ ...+. ..
T Consensus 314 ~E~~al~~~fg~~~-~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v~-~~~~~~~~ 391 (414)
T PRK08722 314 AEIKGIKRALGEAG-SKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVP-HTARKVES 391 (414)
T ss_pred HHHHHHHHHhcccC-CCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCC-CccccCCC
Confidence 99999999998642 22489999999999999999999999999999999999999999999999988877 33333 35
Q ss_pred CcEEEEecccccceeeeeEeeec
Q 040515 228 ISAALSNSFGFGGTNASLLFTKC 250 (251)
Q Consensus 228 ~~~~lv~~~g~gG~~~~~vl~~~ 250 (251)
.+++++|+|||||+|+|+||++.
T Consensus 392 ~~~~l~nsfGfGG~n~~lvl~~~ 414 (414)
T PRK08722 392 MEYAICNSFGFGGTNGSLIFKKM 414 (414)
T ss_pred CCEEEEecccCCCceEEEEEecC
Confidence 79999999999999999999873
No 6
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=6.6e-54 Score=374.50 Aligned_cols=244 Identities=42% Similarity=0.682 Sum_probs=225.7
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhh-cccccCCCCCCcccccccCCCcc--
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRA-LTTKYNGTPQEASRPFDCGRDGF-- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~f~~~~~g~-- 77 (251)
||+++++++|+|++.||.+|+++|++|++|++||||+|..+++..+..|..++. ++.. +..|+..|+|||..++|+
T Consensus 162 G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~-~~~~~~~~rPFd~~~~G~v~ 240 (418)
T PRK07910 162 AGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTN-NDDPAGACRPFDKDRDGFVF 240 (418)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccC-CCCCCCCcCCCcCCCCCEee
Confidence 799999999999999999999999999999999999999889988889999988 6532 445778999999999999
Q ss_pred ----------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCc
Q 040515 78 ----------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD 147 (251)
Q Consensus 78 ----------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D 147 (251)
++++|+++|+++|++|+|++.++|+.+...+.+.+.++.++++++|+++|++|+||||||+||+||+.+|
T Consensus 241 gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D 320 (418)
T PRK07910 241 GEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGD 320 (418)
T ss_pred eceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCC
Confidence 6688999999999999999999999988888888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCC
Q 040515 148 TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMP 227 (251)
Q Consensus 148 ~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (251)
.+|..+++++|+.. ..++++.|+++||+++|+|++++++++++|+++++||++|+++|+|+++++.++ ..++..+
T Consensus 321 ~~E~~Al~~~fg~~----~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~-~~~~~~~ 395 (418)
T PRK07910 321 VAEGKAINNALGGH----RPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVA-GEPRPGN 395 (418)
T ss_pred HHHHHHHHHHhCCC----CCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCC-CCCcCCC
Confidence 99999999999853 257999999999999999999999999999999999999999999999988877 3444557
Q ss_pred CcEEEEecccccceeeeeEeeec
Q 040515 228 ISAALSNSFGFGGTNASLLFTKC 250 (251)
Q Consensus 228 ~~~~lv~~~g~gG~~~~~vl~~~ 250 (251)
.+++++|||||||+|+++||++|
T Consensus 396 ~~~al~nsfGfGG~N~slvl~~~ 418 (418)
T PRK07910 396 YRYAINNSFGFGGHNVALAFGRY 418 (418)
T ss_pred ccEEEEeeecCCCeeEEEEEecC
Confidence 89999999999999999999986
No 7
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=2.7e-53 Score=373.41 Aligned_cols=247 Identities=54% Similarity=0.841 Sum_probs=229.0
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++|+++|+||+.||..|+++|++|++|++||||+|.++++..+..|..++.++..++..|+..|+|||..++|+
T Consensus 164 Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~~G~~~g 243 (424)
T PRK06333 164 GPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRDGFVMG 243 (424)
T ss_pred CCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCCCCeEEe
Confidence 79999999999999999999999999999999999999988988888888888888766777889999999999998
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++++|+++|+++|++|+|++.++|+.+.+.+.+++.++.+++++||++||++|+||||||+||+||+.+|.
T Consensus 244 EGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~ 323 (424)
T PRK06333 244 EGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDL 323 (424)
T ss_pred cceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchH
Confidence 67889999999999999999999998888888888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCC-CCCCccccCCCCC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFN-DNFMPLTASKDMP 227 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~-~~~~~~~~~~~~~ 227 (251)
.|..+++++|+.. .++++++.|+++||+++|+|++++++++++|++++|||++|+++|+|.++ +++++ ...+..+
T Consensus 324 ~E~~al~~~fg~~---~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~~~~~-~~~~~~~ 399 (424)
T PRK06333 324 GEVAAIKKVFGHV---SGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDVVA-NKARPMD 399 (424)
T ss_pred HHHHHHHHHhCCC---CCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCcccccccc-CCCcccC
Confidence 9999999999842 35899999999999999999999999999999999999999999999987 66666 4455667
Q ss_pred CcEEEEecccccceeeeeEeeecC
Q 040515 228 ISAALSNSFGFGGTNASLLFTKCQ 251 (251)
Q Consensus 228 ~~~~lv~~~g~gG~~~~~vl~~~~ 251 (251)
.+++++|+|||||+|+|+||++|+
T Consensus 400 ~~~al~~s~gfGG~n~~~il~~~~ 423 (424)
T PRK06333 400 MDYALSNGFGFGGVNASILFRRWE 423 (424)
T ss_pred cCEEEEeeecCCCeeEEEEEeccC
Confidence 899999999999999999999984
No 8
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=100.00 E-value=4.4e-53 Score=372.01 Aligned_cols=251 Identities=84% Similarity=1.252 Sum_probs=231.7
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++|+++|+|++.||..|+++|++|++|++||||+|...++..+..|..++.++..++.+|+..++|||..++|+
T Consensus 175 Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~~G~~~g 254 (437)
T PLN02836 175 GPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDRDGFVIG 254 (437)
T ss_pred CceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCCCCeeee
Confidence 89999999999999999999999999999999999999988998888898888888666666778999999999998
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++++|+++|+++|++|+|++.++|+.+.+.|.+.++...+++++||++|||+|+||||||+||+||+.+|.
T Consensus 255 EGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~ 334 (437)
T PLN02836 255 EGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDA 334 (437)
T ss_pred cCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCH
Confidence 67889999999999999999999998888888888888999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPI 228 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
.|..++.++|+.....+.+++++.|+++||+++|+|++++++++++|++++|||++|+++|+|.+++++++....+..+.
T Consensus 335 ~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~~~~~~~~~~~~~~~ 414 (437)
T PLN02836 335 VEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVPLTASKAMLI 414 (437)
T ss_pred HHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCcccCCCCCCc
Confidence 99999999998765545689999999999999999999999999999999999999999999999988777433345578
Q ss_pred cEEEEecccccceeeeeEeeecC
Q 040515 229 SAALSNSFGFGGTNASLLFTKCQ 251 (251)
Q Consensus 229 ~~~lv~~~g~gG~~~~~vl~~~~ 251 (251)
+.+++|||||||+|+|+||++++
T Consensus 415 ~~~l~nsfgfGG~na~lvl~~~~ 437 (437)
T PLN02836 415 RAALSNSFGFGGTNASLLFTSPP 437 (437)
T ss_pred cEEEEecccCCCeeEEEEEecCC
Confidence 99999999999999999999874
No 9
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=100.00 E-value=1.9e-52 Score=366.76 Aligned_cols=249 Identities=58% Similarity=0.921 Sum_probs=227.7
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++|+++|+||+.||.+|+++|++|++|++||||+|.++++..+..|..++.++.....+|+..++|||.+++|+
T Consensus 159 Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~~G~~~g 238 (421)
T PTZ00050 159 GPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGFVMG 238 (421)
T ss_pred CcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCCCCEeec
Confidence 79999999999999999999999999999999999999988888888898888887655556788999999999998
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHH-cCCCCCCccEEEecCCCCcCCc
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ-SGLQSHQVDYVNAHATSTPLGD 147 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-Agi~~~dId~i~~h~~gt~~~D 147 (251)
++++|+++|+++|++|+|++.++|+.+.+.|.+++.++.++++++|++ ||++|+||||||+||+||+.+|
T Consensus 239 EGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D 318 (421)
T PTZ00050 239 EGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAHATSTPIGD 318 (421)
T ss_pred cceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCccCCCCC
Confidence 778899999999999999999999988888888889999999999999 9999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCC-C
Q 040515 148 TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD-M 226 (251)
Q Consensus 148 ~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~-~ 226 (251)
.+|..++.++|+.... .+++|++.|+++||+++|+|++++++++++|++++|||++|+++|+|.+++++++...... .
T Consensus 319 ~~E~~al~~~~~~~~~-~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~ 397 (421)
T PTZ00050 319 KIELKAIKKVFGDSGA-PKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQ 397 (421)
T ss_pred HHHHHHHHHHhccccC-CCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCcCC
Confidence 9999999999986431 3589999999999999999999999999999999999999999999999988877332222 2
Q ss_pred CCcEEEEecccccceeeeeEeeec
Q 040515 227 PISAALSNSFGFGGTNASLLFTKC 250 (251)
Q Consensus 227 ~~~~~lv~~~g~gG~~~~~vl~~~ 250 (251)
+.+++++|||||||+|+++||+++
T Consensus 398 ~~~~~l~nsfgfgG~n~~lvl~~~ 421 (421)
T PTZ00050 398 SIDAVLSTSFGFGGVNTALLFTKY 421 (421)
T ss_pred CCCEEEEeeecCCCeeEEEEEeCC
Confidence 579999999999999999999986
No 10
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=100.00 E-value=4.6e-52 Score=361.11 Aligned_cols=240 Identities=47% Similarity=0.750 Sum_probs=215.7
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++|+++|+|++.||.+|+++|++|++|++||||+|. ..+.....|..++.++...+.+|+..|+|||..++|+
T Consensus 153 Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~-~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v~g 231 (406)
T PRK07967 153 GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIA 231 (406)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecc-cChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCCceeee
Confidence 899999999999999999999999999999999999997 4555566788888888665667889999999999999
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++++|++||++||++|+|++.++|+.+++.| ++.++.++|++||+.++ + |||||++|||||+.+|.
T Consensus 232 EGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p--~~~~~~~a~~~Al~~~~--~-~Idyi~aHgtGT~~~D~ 306 (406)
T PRK07967 232 GGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAP--SGEGAVRCMQMALATVD--T-PIDYINTHGTSTPVGDV 306 (406)
T ss_pred ceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCC--CHHHHHHHHHHHHhCCC--C-CccEEEcCCCCCCCCCH
Confidence 6688999999999999999999999887654 68899999999998654 5 99999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCC-CCCCCccccCCCCC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIF-NDNFMPLTASKDMP 227 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~-~~~~~~~~~~~~~~ 227 (251)
+|..|++++|+.. .+||+++|+++||+++|+|+.++++++++|++++|||++|+++++|++ ++++++ ...+..+
T Consensus 307 ~E~~Ai~~~fg~~----~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~~-~~~~~~~ 381 (406)
T PRK07967 307 KELGAIREVFGDK----SPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIVT-ETTDNAE 381 (406)
T ss_pred HHHHHHHHHhCCC----CCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCccC-CCCcCCC
Confidence 9999999999753 268999999999999999999999999999999999999999999987 566665 3334446
Q ss_pred CcEEEEecccccceeeeeEeeecC
Q 040515 228 ISAALSNSFGFGGTNASLLFTKCQ 251 (251)
Q Consensus 228 ~~~~lv~~~g~gG~~~~~vl~~~~ 251 (251)
.+.+++|+|||||+|+|+||++|+
T Consensus 382 ~~~~l~~sfgfGG~n~~lvl~~~~ 405 (406)
T PRK07967 382 LTTVMSNSFGFGGTNATLVFRRYK 405 (406)
T ss_pred CCEEEEecccCCCeeEEEEEEecC
Confidence 889999999999999999999985
No 11
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=100.00 E-value=4.7e-52 Score=415.75 Aligned_cols=244 Identities=32% Similarity=0.500 Sum_probs=221.3
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++|+++|+||+.||++|+++|++|+||++||||++...++..+..|.+.+.++ +++.|+|||.+++||
T Consensus 197 Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS------~~g~crpFD~~adG~v~G 270 (2582)
T TIGR02813 197 GMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFT------TNEDIQPFDIDSKGMMIG 270 (2582)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcC------CCCCccCCCCCCCccccc
Confidence 89999999999999999999999999999999999999999999999999999987 558899999999999
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++++|+++|++||++|+|++.++||+......|+..++.++|+++|++||++|+||+|||+|||||+.+|+
T Consensus 271 EGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~ 350 (2582)
T TIGR02813 271 EGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDV 350 (2582)
T ss_pred ceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCH
Confidence 78999999999999999999999998544455667788999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccC-CCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCC---------
Q 040515 149 VEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFM--------- 218 (251)
Q Consensus 149 ~E~~a~~~~~~~~~-~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~--------- 218 (251)
+|..||.++|+... ...+++|+|+|+++||+++|+|+++++|++++|++++|||++|+++|+|.++++..
T Consensus 351 ~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~ 430 (2582)
T TIGR02813 351 AEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETR 430 (2582)
T ss_pred HHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcc
Confidence 99999999998643 23569999999999999999999999999999999999999999999999876632
Q ss_pred ccccCCCCCCcEEEEecccccceeeeeEeeec
Q 040515 219 PLTASKDMPISAALSNSFGFGGTNASLLFTKC 250 (251)
Q Consensus 219 ~~~~~~~~~~~~~lv~~~g~gG~~~~~vl~~~ 250 (251)
+|.......+|+++||+|||||+|+|+||++|
T Consensus 431 pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 431 PWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred cCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 22211223579999999999999999999987
No 12
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=4.8e-51 Score=358.00 Aligned_cols=247 Identities=61% Similarity=0.974 Sum_probs=226.5
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++++++|+|++.||..|+++|++|++|++||||+|.++++..+..|..++.++.+ ...|...++|||..++|+
T Consensus 153 Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~-~~~p~~~~~pfd~~~dG~~~g 231 (411)
T PRK07314 153 GPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTR-NDDPERASRPFDKDRDGFVMG 231 (411)
T ss_pred CccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCC-CCCCCcCcCCCcCCCCCEeEE
Confidence 7999999999999999999999999999999999999998899888888888888753 445678899999999998
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
+++.|++++.++|++|+|++.++|+.+.+.+.+....+.++++++|+++|++++||||||+||+||+.+|.
T Consensus 232 eGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~ 311 (411)
T PRK07314 232 EGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGTSTPAGDK 311 (411)
T ss_pred ceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEccccCCccccH
Confidence 67889999999999999999999988877777778888999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPI 228 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
.|..++.++|+... .++++++.|+++||+++|+|++++++++++|+++.|||++|+++|++.+++++++ ...+..+.
T Consensus 312 ~E~~al~~~~~~~~--~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~-~~~~~~~~ 388 (411)
T PRK07314 312 AETQAIKRVFGEHA--YKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVP-NEARERKI 388 (411)
T ss_pred HHHHHHHHHhcccC--CCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccccC-CcccCCCC
Confidence 99999999998532 3489999999999999999999999999999999999999999999999988887 44555678
Q ss_pred cEEEEecccccceeeeeEeeecC
Q 040515 229 SAALSNSFGFGGTNASLLFTKCQ 251 (251)
Q Consensus 229 ~~~lv~~~g~gG~~~~~vl~~~~ 251 (251)
+++++|+|||||+|+|+||++|.
T Consensus 389 ~~al~~s~gfGG~n~~~vl~~~~ 411 (411)
T PRK07314 389 DYALSNSFGFGGTNASLVFKRYE 411 (411)
T ss_pred CEEEEecccCCCceEEEEEecCC
Confidence 99999999999999999999984
No 13
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=100.00 E-value=7.2e-51 Score=354.14 Aligned_cols=236 Identities=28% Similarity=0.465 Sum_probs=217.8
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++++++|+|++.||.+|+++|++|+ |++||||+|..+++..+..|..++.++. ...|...|+|||.+++|+
T Consensus 152 Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~--~~~p~~~~rPFd~~~~G~~~g 228 (399)
T cd00832 152 GPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLST--SDDPARAYLPFDAAAAGYVPG 228 (399)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCC--CCCCCCCcCCCcCCCCCEeee
Confidence 8999999999999999999999999999 9999999999999999999999988874 345678999999999999
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++++|++||+++|++|+|++.++|+.+... ...++.++|+++|+++|++|+|||||++|||||+.+|.
T Consensus 229 EGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~---~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~ 305 (399)
T cd00832 229 EGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSG---RPPGLARAIRLALADAGLTPEDVDVVFADAAGVPELDR 305 (399)
T ss_pred ceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCC---CHHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCH
Confidence 778999999999999999999999876532 47789999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPI 228 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
.|..+++++|+.. .+||++.|+++||+++|+|++++++++++|+++.|||++|+++|+|.+++++++ ...++.+.
T Consensus 306 ~E~~al~~~fg~~----~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~~v~-~~~~~~~~ 380 (399)
T cd00832 306 AEAAALAAVFGPR----GVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLDLVT-GRPRPAAL 380 (399)
T ss_pred HHHHHHHHHhCCC----CCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccCC-CcccCCCC
Confidence 9999999999863 378999999999999999999999999999999999999999999999988877 44455578
Q ss_pred cEEEEecccccceeeeeEe
Q 040515 229 SAALSNSFGFGGTNASLLF 247 (251)
Q Consensus 229 ~~~lv~~~g~gG~~~~~vl 247 (251)
+++++|||||||+|+++||
T Consensus 381 ~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 381 RTALVLARGRGGFNSALVV 399 (399)
T ss_pred CEEEEeccCCCCcceEEEC
Confidence 9999999999999999986
No 14
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=9.4e-51 Score=353.57 Aligned_cols=238 Identities=41% Similarity=0.662 Sum_probs=215.5
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++++++|+|+++||..|+++|++|++|++||||+|. +++.....|..++.++.. ...|...|+|||.+++|+
T Consensus 155 Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~-~~~~~~~~f~~l~~~~~~-~~~~~~~~rPfd~~~~G~v~g 232 (405)
T PRK09116 155 GRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE-LCPTEAAVFDTLFATSTR-NDAPELTPRPFDANRDGLVIG 232 (405)
T ss_pred CCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh-cChHHHHHHHHhhhhccC-CCCCCCCCCCCcCCCCCEeee
Confidence 899999999999999999999999999999999999998 677777778777766532 345677899999999999
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++++|+++|+++|++|+|++.++|+.+.+.| +...+.++++++|++++++|+|||||++|||||+.+|.
T Consensus 233 EGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p--~~~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~ 310 (405)
T PRK09116 233 EGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQP--QAETMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDI 310 (405)
T ss_pred ccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCC--CHHHHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCH
Confidence 6788999999999999999999999876655 56788999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCC-CCCCCccccCCCCC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIF-NDNFMPLTASKDMP 227 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~-~~~~~~~~~~~~~~ 227 (251)
.|..|++++|+. .+||++.|+++||+++|+|++++++++++|++++|||++|+++|+|++ ++++++ ...+..+
T Consensus 311 ~E~~Ai~~~fg~-----~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v~-~~~~~~~ 384 (405)
T PRK09116 311 AESQATAAVFGA-----RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIM-GEAREID 384 (405)
T ss_pred HHHHHHHHHhCC-----CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCccC-CCCccCC
Confidence 999999999985 279999999999999999999999999999999999999999999998 678777 4455567
Q ss_pred CcEEEEecccccceeeeeEee
Q 040515 228 ISAALSNSFGFGGTNASLLFT 248 (251)
Q Consensus 228 ~~~~lv~~~g~gG~~~~~vl~ 248 (251)
.+++|+|+|||||+|+++||+
T Consensus 385 ~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 385 TEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred CCEEEEeeecCCcccEEEEEC
Confidence 899999999999999999985
No 15
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.4e-50 Score=353.35 Aligned_cols=242 Identities=48% Similarity=0.820 Sum_probs=222.4
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++++++|+|++.||.+|+++|++|++|++||+|+|..+++..+..|..++.++.. +..|+..|+|||..++|+
T Consensus 153 Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~-~~~p~~~~rpfd~~~~G~v~g 231 (406)
T PRK08439 153 GPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTR-NDDPKKASRPFDKDRDGFVMG 231 (406)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccC-CCCCccCcCCccCCCCcEEee
Confidence 7999999999999999999999999999999999999998999999999999988754 455778999999999998
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++++|+++|+++|++|+|++.+.|+.+.+.|.+ .++.++|+++|+++|+ +|||||++||+||+.+|.
T Consensus 232 EGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~--~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~D~ 307 (406)
T PRK08439 232 EGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAP--EGPLRAMKAALEMAGN--PKIDYINAHGTSTPYNDK 307 (406)
T ss_pred CceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCH--HHHHHHHHHHHHHcCC--CccCEEEccCCcCCCCCH
Confidence 678899999999999999999999888777655 6888999999999999 799999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPI 228 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
.|..+++++|+... ..+++++.|+++||+++|+|++++++++++|++++|||++|+++|+|.+++++++ ...+..+.
T Consensus 308 ~E~~al~~~f~~~~--~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-~~~~~~~~ 384 (406)
T PRK08439 308 NETAALKELFGSKE--KVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDYIP-NVARKAEL 384 (406)
T ss_pred HHHHHHHHHhcccC--CCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcccCC-CccccCCC
Confidence 99999999998643 2368999999999999999999999999999999999999999999999998888 44556678
Q ss_pred cEEEEecccccceeeeeEeeec
Q 040515 229 SAALSNSFGFGGTNASLLFTKC 250 (251)
Q Consensus 229 ~~~lv~~~g~gG~~~~~vl~~~ 250 (251)
+.+++|||||||+|+++||++|
T Consensus 385 ~~~l~nsfgfGG~n~~lvl~~~ 406 (406)
T PRK08439 385 NVVMSNSFGFGGTNGVVIFKKV 406 (406)
T ss_pred CEEEEeeecCCCceEEEEEecC
Confidence 9999999999999999999986
No 16
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=9.3e-51 Score=349.96 Aligned_cols=233 Identities=42% Similarity=0.707 Sum_probs=214.9
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++++++|+|++.||.+|+++|++|++|++||||+|...++..+..|..++.++. ..|+|||.+++|+
T Consensus 137 Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~-------~~~rPfd~~r~G~v~g 209 (381)
T PRK05952 137 GPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAK-------TGAYPFDRQREGLVLG 209 (381)
T ss_pred CccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCC-------CCCCCCCCCCCCcccc
Confidence 899999999999999999999999999999999999998889999999999988864 4599999999998
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++++|+++++++|++|+|++.++|+.+...+.++...+.++++++|+++|++|+||||||+||+||+.+|.
T Consensus 210 EGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~ 289 (381)
T PRK05952 210 EGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQ 289 (381)
T ss_pred ccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcH
Confidence 67889999999999999999999999888888888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPI 228 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
.|..+++++|+. .+||++.|+++||+++|+|++++++++++|++++|||++|+++|.++ +++++ .++..+.
T Consensus 290 ~E~~al~~~fg~-----~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~--~~~v~--~~~~~~~ 360 (381)
T PRK05952 290 REANLIQALFPH-----RVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFD--LNFVR--QAQQSPL 360 (381)
T ss_pred HHHHHHHHHcCC-----CCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCC--CCcCC--CcccCCC
Confidence 999999999974 38999999999999999999999999999999999999999987554 45554 2345578
Q ss_pred cEEEEecccccceeeeeEeee
Q 040515 229 SAALSNSFGFGGTNASLLFTK 249 (251)
Q Consensus 229 ~~~lv~~~g~gG~~~~~vl~~ 249 (251)
+++++|+|||||+|+++||++
T Consensus 361 ~~~l~~s~gfGG~na~lvl~~ 381 (381)
T PRK05952 361 QNVLCLSFGFGGQNAAIALGK 381 (381)
T ss_pred CEEEEeeecCCCeeEEEEEeC
Confidence 999999999999999999985
No 17
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.8e-51 Score=389.02 Aligned_cols=245 Identities=31% Similarity=0.517 Sum_probs=226.6
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++|+++|+|+++|+++||+.|++|+||++|+||++...++.....+++.+.++ |++.|++||..++||
T Consensus 165 GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls------~~g~c~~fd~~adG~v~g 238 (1061)
T COG3321 165 GPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLS------PDGRCKAFDADADGYVRG 238 (1061)
T ss_pred CCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcC------CCCcceecccCCCCEEEe
Confidence 89999999999999999999999999999999999999999999999999999887 779999999999998
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++++|.++|++||++|+|+++++||.......|+..++..+++++|+++||+|++|+|||+|||||+.+|+
T Consensus 239 eG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~lGDp 318 (1061)
T COG3321 239 EGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGTPLGDP 318 (1061)
T ss_pred eeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCCCCcCH
Confidence 78899999999999999999999997656677788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccc-----cC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLT-----AS 223 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~-----~~ 223 (251)
+|..++..+|+......++.++|+|+|+||++.|+|+++++|++++|+++.+||++|+++|+|.++++..|+. .+
T Consensus 319 iE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~~v~~~~~~ 398 (1061)
T COG3321 319 IEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEATP 398 (1061)
T ss_pred HHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCeEeecCCcC
Confidence 9999999999876566789999999999999999999999999999999999999999999999987644431 11
Q ss_pred CC--CCCcEEEEecccccceeeeeEeeecC
Q 040515 224 KD--MPISAALSNSFGFGGTNASLLFTKCQ 251 (251)
Q Consensus 224 ~~--~~~~~~lv~~~g~gG~~~~~vl~~~~ 251 (251)
+. ..+|++.|++||+||+|+|+|||+|.
T Consensus 399 W~~~~~prrAgvssfG~gGtNaHvIlEe~~ 428 (1061)
T COG3321 399 WPTGGGPRRAGVSSFGFGGTNAHVILEEAP 428 (1061)
T ss_pred CCCCCCCceeeeeccCCCCCceEEEEeecC
Confidence 21 25899999999999999999999863
No 18
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.8e-49 Score=348.04 Aligned_cols=247 Identities=44% Similarity=0.654 Sum_probs=225.0
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++|+++|+|++.||.+|+++|++|++|++||+|+|..+++..+..|..++.++.. ...|+..++|||.+++|+
T Consensus 166 G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~rpfd~~r~G~v~G 244 (425)
T PRK06501 166 GLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQ-NDPPEKASKPFSKDRDGFVMA 244 (425)
T ss_pred CCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccC-CCCCCcccCCCCCCCCCeeee
Confidence 7999999999999999999999999999999999999988899888888888877643 334678899999999998
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++++|+++|+++|++|.|++..+|+.+.+.+.++...+.++++++|+++|++|+|||||++||+||+.+|.
T Consensus 245 EGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~ 324 (425)
T PRK06501 245 EGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLTPEQIDYINAHGTSTPENDK 324 (425)
T ss_pred ccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCccCcchHH
Confidence 66789999999999999999999988777777788889999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPI 228 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
.|..++..+|+... ..+||++.|+++||+++|+|++++++++++|+++++||++|+++|+|.++++.++ ...+..+.
T Consensus 325 ~E~~al~~~~~~~~--~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~~~-~~~~~~~~ 401 (425)
T PRK06501 325 MEYLGLSAVFGERL--ASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVP-NVARDARV 401 (425)
T ss_pred HHHHHHHHHhcccC--CCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCCCCcccCC-CcccCCCC
Confidence 99999999997532 3489999999999999999999999999999999999999999999999998887 33445578
Q ss_pred cEEEEecccccceeeeeEeeecC
Q 040515 229 SAALSNSFGFGGTNASLLFTKCQ 251 (251)
Q Consensus 229 ~~~lv~~~g~gG~~~~~vl~~~~ 251 (251)
+.+++|||||||+|+++||++++
T Consensus 402 ~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 402 TAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred CEEEEeCccCCCeeEEEEEecCC
Confidence 99999999999999999999874
No 19
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=100.00 E-value=3e-49 Score=346.42 Aligned_cols=244 Identities=63% Similarity=0.989 Sum_probs=221.5
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++++++|+|++.||.+|+++|++|++|++||+|+|.++++.....+...+.++.. +..+...++||+..++|+
T Consensus 152 g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~-~~~~~~~~~pfd~~~~g~~~g 230 (407)
T TIGR03150 152 GPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTR-NDDPEKASRPFDKDRDGFVMG 230 (407)
T ss_pred CcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCC-CCCCCcCCCCCcCCCCcEEEe
Confidence 7899999999999999999999999999999999999998898888888888877642 445667899999999998
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++++|+++|+++|++|+|++.++|+.+...+.+...++.++++++|+++|++++||||||+|++||+.+|.
T Consensus 231 EGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~ 310 (407)
T TIGR03150 231 EGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPLGDK 310 (407)
T ss_pred ceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCH
Confidence 66788999999999999999999988777777777889999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPI 228 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
+|..++.++|+... .++||++.|+++||+++|||++++++++++|++++|||++|+++|+|.++++++++ +.+..+.
T Consensus 311 ~E~~a~~~~~~~~~--~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~-~~~~~~~ 387 (407)
T TIGR03150 311 AETKAIKRVFGDHA--YKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDYVPN-EARERKI 387 (407)
T ss_pred HHHHHHHHHhccCC--CCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCC-CCccCCc
Confidence 99999999998643 24899999999999999999999999999999999999999999999999988874 4445567
Q ss_pred cEEEEecccccceeeeeEee
Q 040515 229 SAALSNSFGFGGTNASLLFT 248 (251)
Q Consensus 229 ~~~lv~~~g~gG~~~~~vl~ 248 (251)
+++++|+|||||+|+|+||+
T Consensus 388 ~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 388 DYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred CEEEEecccCCCceEEEEeC
Confidence 89999999999999999984
No 20
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=100.00 E-value=2.2e-48 Score=340.87 Aligned_cols=241 Identities=39% Similarity=0.608 Sum_probs=217.2
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++|+++|+|++.||..|+++|++|++|++||+|+|.+. +..+..|..++.++.. ...|...++||+..++|+
T Consensus 153 Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~~f~~~~~ls~~-~~~~~~~~~pfd~~~~G~~~g 230 (407)
T cd00828 153 GPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL-EEGLSGFANMGALSTA-EEEPEEMSRPFDETRDGFVEA 230 (407)
T ss_pred CCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC-hHHHHHHHHcCCCCCC-CCCCCcccCCCcCCCCcEEee
Confidence 79999999999999999999999999999999999999977 8788888888888754 233557899999999998
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++++|+++|+++|++|.|++.++|+.+...+. +..++.++++++|+++|++|+||||||+|++||+.+|.
T Consensus 231 EGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~-~~~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~ 309 (407)
T cd00828 231 EGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPA-GGKGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDV 309 (407)
T ss_pred cceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCC-ChHHHHHHHHHHHHHcCCCHHHcCEEecccccCccccH
Confidence 67889999999999999999999988766555 67889999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCC-
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMP- 227 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~- 227 (251)
.|..+++++|+... .++||++.|+++||+++|+|++++++++++|+++++||++|+++|+|+++.+.++ ...+..+
T Consensus 310 ~E~~ai~~~~~~~~--~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~-~~~~~~~~ 386 (407)
T cd00828 310 AESRAIAEVAGALG--APLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLSVV-GLSRDLNL 386 (407)
T ss_pred HHHHHHHHHHhccC--CCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCccccccccc-CcCccCCC
Confidence 99999999998754 3489999999999999999999999999999999999999999999999777666 3334444
Q ss_pred -CcEEEEecccccceeeeeEe
Q 040515 228 -ISAALSNSFGFGGTNASLLF 247 (251)
Q Consensus 228 -~~~~lv~~~g~gG~~~~~vl 247 (251)
.+.+++|+|||||+|+++||
T Consensus 387 ~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 387 KVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred CccEEEEecccCCCcceEEEC
Confidence 48999999999999999986
No 21
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=100.00 E-value=3e-47 Score=333.75 Aligned_cols=243 Identities=58% Similarity=0.936 Sum_probs=221.0
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++++++|+|+++||..|+++|++|++|.+||+|+|..+.+..+..|..++.++... ..|...++||+..++|+
T Consensus 152 g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~-~~p~~~~~pf~~~~~g~~~g 230 (406)
T cd00834 152 GPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRN-DDPEKASRPFDKDRDGFVLG 230 (406)
T ss_pred CcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCC-CCCccCCCCCCCCCCCEeee
Confidence 78999999999999999999999999999999999999988899999999988887642 23667899999999998
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
+.++|+++++++|++|+|++..+++.+.+.+.+...++.++++++|+++|++++|||||++|++||+.+|.
T Consensus 231 eGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~ 310 (406)
T cd00834 231 EGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGTSTPLNDA 310 (406)
T ss_pred ccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEecccccCccccH
Confidence 66788899999999999999999988777777778899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPI 228 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
+|.+++.++|+... .++++++.|+++||+++|||++++++++++|+++++||++|+++|+|.+++++++ .+.++.+.
T Consensus 311 ~E~~al~~~~~~~~--~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~-~~~~~~~~ 387 (406)
T cd00834 311 AESKAIKRVFGEHA--KKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLDYVP-NEAREAPI 387 (406)
T ss_pred HHHHHHHHHhcccC--CCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC-CCCccccc
Confidence 99999999998642 3489999999999999999999999999999999999999999999988888776 44455567
Q ss_pred cEEEEecccccceeeeeEe
Q 040515 229 SAALSNSFGFGGTNASLLF 247 (251)
Q Consensus 229 ~~~lv~~~g~gG~~~~~vl 247 (251)
|++++|+|||||+|+|+||
T Consensus 388 ~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 388 RYALSNSFGFGGHNASLVF 406 (406)
T ss_pred cEEEEeeecCCceeeEEEC
Confidence 9999999999999999996
No 22
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=100.00 E-value=5e-47 Score=331.50 Aligned_cols=239 Identities=34% Similarity=0.546 Sum_probs=210.1
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccc-cCCCCCCcccccccCCCcc--
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK-YNGTPQEASRPFDCGRDGF-- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~f~~~~~g~-- 77 (251)
||+++++++|+|++.||..|+++|++|++|++||+|++...++.....|..++.++.. +..+|...|+|||..++|+
T Consensus 158 G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~dG~v~ 237 (410)
T PRK07103 158 GEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGFIY 237 (410)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCCCeeE
Confidence 7999999999999999999999999999999999999887888888888888877642 2446778999999999998
Q ss_pred ----------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCc
Q 040515 78 ----------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD 147 (251)
Q Consensus 78 ----------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D 147 (251)
++++|+++|+++|++|+|++.++|+.+.. .+...++.++++++|+++|++|+|||||++||+||+.+|
T Consensus 238 gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~--~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgtgt~~~D 315 (410)
T PRK07103 238 GEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGP--DPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSPLGD 315 (410)
T ss_pred eeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCC--CCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCCCCC
Confidence 67889999999999999999999988754 445667889999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCC-CCCCCCCCCccccCCCC
Q 040515 148 TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKP-DPIFNDNFMPLTASKDM 226 (251)
Q Consensus 148 ~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~-~~~~~~~~~~~~~~~~~ 226 (251)
..|..+| |+.. ..++||++.|+.+||+++|+|++++++++++|++++|||++|+++| ++.+ ++++ ...+..
T Consensus 316 ~~E~~al---~~~~--~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~--~~v~-~~~~~~ 387 (410)
T PRK07103 316 ETELAAL---FASG--LAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERF--RWVG-STAESA 387 (410)
T ss_pred HHHHHHH---hcCC--CCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCc--CccC-CCCcCC
Confidence 9999999 3322 1348999999999999999999999999999999999999999998 5544 4444 333445
Q ss_pred CCcEEEEecccccceeeeeEeee
Q 040515 227 PISAALSNSFGFGGTNASLLFTK 249 (251)
Q Consensus 227 ~~~~~lv~~~g~gG~~~~~vl~~ 249 (251)
..+++++|+|||||+|+++||++
T Consensus 388 ~~~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 388 RIRYALSLSFGFGGINTALVLER 410 (410)
T ss_pred CCCEEEEecccCCCceEEEEEeC
Confidence 68999999999999999999986
No 23
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=100.00 E-value=6.3e-46 Score=322.82 Aligned_cols=237 Identities=40% Similarity=0.701 Sum_probs=205.8
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchh
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELE 80 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~ 80 (251)
||+++++++|+|++.||..|+++|++|++|.+||+|+|. ..+..+..|..++.++. ..|+|||..++|+...
T Consensus 151 Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~-~~~~~~~~~~~~~~l~~-------~~~~Pfd~~~~G~~~g 222 (392)
T PRK09185 151 GPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESLSP-------QPCRPFSANRDGINIG 222 (392)
T ss_pred CCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccc-cChHHHHHHHhccccCC-------CccCCCcCCCCcccee
Confidence 799999999999999999999999999999999999997 45555566666666542 6799999999999443
Q ss_pred hhh-----hcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHH
Q 040515 81 HAK-----KRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIR 155 (251)
Q Consensus 81 ~A~-----~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~ 155 (251)
++. ++-....++|.|++..+|+.+...+.+...++.++++++|+++|++|+|||||++||+||+.+|..|..++.
T Consensus 223 EGaa~vVLe~~~~~~~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~ 302 (392)
T PRK09185 223 EAAAFFLLEREDDAAVALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVA 302 (392)
T ss_pred ceEEEEEEEEcCCCcEEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHH
Confidence 321 111122357999999999988777788888889999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEec
Q 040515 156 TVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNS 235 (251)
Q Consensus 156 ~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~ 235 (251)
++|+.. +||++.|+++||+++|+|++++++++++|+++++||++|+++++|+++++.++ .+.+....+++++|+
T Consensus 303 ~~f~~~-----~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~s 376 (392)
T PRK09185 303 AVFGDG-----VPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLV-ENAQALAIRYVLSNS 376 (392)
T ss_pred HHhCCC-----CceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccC-CCCccCCCCEEEEeC
Confidence 999753 68999999999999999999999999999999999999999999999877666 344455689999999
Q ss_pred ccccceeeeeEeeecC
Q 040515 236 FGFGGTNASLLFTKCQ 251 (251)
Q Consensus 236 ~g~gG~~~~~vl~~~~ 251 (251)
|||||+|+++||++.+
T Consensus 377 ~gfgG~n~~lvl~~~~ 392 (392)
T PRK09185 377 FAFGGNNCSLIFGRAD 392 (392)
T ss_pred ccCCceeEEEEEEeCC
Confidence 9999999999999865
No 24
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=100.00 E-value=1.9e-45 Score=324.02 Aligned_cols=243 Identities=33% Similarity=0.562 Sum_probs=215.5
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++++++|+|++.||..|+++|++|++|++||+|+|....+..+..+...+.++ +...++||+..++|+
T Consensus 161 g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~------~~~~~~pf~~~~~g~~~g 234 (424)
T smart00825 161 GPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLS------PDGRCKTFDADADGYVRG 234 (424)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCC------CCCCCCCCCCCCCccccc
Confidence 78999999999999999999999999999999999999988888888888777765 457899999999998
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
+.++|+++++++|++|+|++..+++.+.....+....+..+++++|+++|++++|||+|++||+||+.+|.
T Consensus 235 eGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~ 314 (424)
T smart00825 235 EGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTPLGDP 314 (424)
T ss_pred ceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCH
Confidence 66788899999999999999999887654555677888999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccC-CCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCC----CccccC
Q 040515 149 VEATAIRTVFSDHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNF----MPLTAS 223 (251)
Q Consensus 149 ~E~~a~~~~~~~~~-~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~----~~~~~~ 223 (251)
.|..+++.+|+... .+.++||++.|+++||+.+|+|++++++++++|++++|||++|+++|++.++++. ++ ...
T Consensus 315 ~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~-~~~ 393 (424)
T smart00825 315 IEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEESPLRVP-TEA 393 (424)
T ss_pred HHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccCceEcc-CCC
Confidence 99999999998643 2346899999999999999999999999999999999999999999999887652 22 122
Q ss_pred C----CCCCcEEEEecccccceeeeeEeeec
Q 040515 224 K----DMPISAALSNSFGFGGTNASLLFTKC 250 (251)
Q Consensus 224 ~----~~~~~~~lv~~~g~gG~~~~~vl~~~ 250 (251)
+ ...++.+++|+|||||+|+++||++|
T Consensus 394 ~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~~ 424 (424)
T smart00825 394 TPWPATGRPRRAGVSSFGFGGTNAHVILEEA 424 (424)
T ss_pred cCCCCCCCccEEEEeccCCCCceEEEEEecC
Confidence 1 23579999999999999999999986
No 25
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=100.00 E-value=9.3e-44 Score=313.02 Aligned_cols=240 Identities=34% Similarity=0.585 Sum_probs=211.3
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++++++|+|++.||..|+++|++|++|++||+|+|.+..+..+..+..++.++ +...++||+..++|+
T Consensus 161 g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~------~~~~~~pf~~~~~g~~~g 234 (421)
T cd00833 161 GPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLS------PDGRCRPFDADADGYVRG 234 (421)
T ss_pred CCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCC------CCCCCCCCCCCCCCeeee
Confidence 78999999999999999999999999999999999999988888888888777766 446799999999988
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
++++|+++++++|++|+|++..+++.+.....+....+.++++++|+++|++++|||||++||+||+.+|.
T Consensus 235 eGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~ 314 (421)
T cd00833 235 EGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDP 314 (421)
T ss_pred ceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCH
Confidence 66788899999999999999999987555555678889999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCC-CCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCC----CCccccC
Q 040515 149 VEATAIRTVFSDHAT-SGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDN----FMPLTAS 223 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~-~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~----~~~~~~~ 223 (251)
.|..++..+|+.... ..++++++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.++++ .++ .+.
T Consensus 315 ~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~-~~~ 393 (421)
T cd00833 315 IEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESPLRVP-TEA 393 (421)
T ss_pred HHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCCCCcccCCeEee-CCC
Confidence 999999999986532 33589999999999999999999999999999999999999999999988753 222 111
Q ss_pred CCC----CCcEEEEecccccceeeeeEe
Q 040515 224 KDM----PISAALSNSFGFGGTNASLLF 247 (251)
Q Consensus 224 ~~~----~~~~~lv~~~g~gG~~~~~vl 247 (251)
++. .++.+++|+|||||+|+|+||
T Consensus 394 ~~~~~~~~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 394 RPWPAPAGPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred ccCCCCCCCeEEEEeCcCCCCceeEEeC
Confidence 111 479999999999999999986
No 26
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-42 Score=314.94 Aligned_cols=240 Identities=24% Similarity=0.399 Sum_probs=212.3
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchh
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELE 80 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~ 80 (251)
||+++++++|+|++.||..|++.|+.|+||.+||+|++..+.|.....|.++++++ |++.|+.||...+||...
T Consensus 161 GPS~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls------~dGsCkaFDeagnGY~Rs 234 (2376)
T KOG1202|consen 161 GPSFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLS------PDGSCKAFDEAGNGYCRS 234 (2376)
T ss_pred CCchhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcC------CCCcccchhccCCceeec
Confidence 89999999999999999999999999999999999999999999999999999998 679999999999999322
Q ss_pred hh--------hhcCCeEEEEEeeeeecCCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHH
Q 040515 81 HA--------KKRGAKIYAEVRGYGMSGDAHH-ITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEA 151 (251)
Q Consensus 81 ~A--------~~~g~~~~a~i~g~~~~~~~~~-~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~ 151 (251)
+. ++...++|+.|.....++||+. .....|.++.+.+.+++.|+++|++|+++-|||+|||||+.+|+-|+
T Consensus 235 eg~~avllqrk~~ArRvYAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTkVGDpQEa 314 (2376)
T KOG1202|consen 235 EGVVAVLLQRKSLARRVYATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTKVGDPQEA 314 (2376)
T ss_pred CceEEEEEehhHHHHHHHHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCCCCChHHh
Confidence 21 1122367999999999999974 34445678899999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCC------CCCCccccCCC
Q 040515 152 TAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFN------DNFMPLTASKD 225 (251)
Q Consensus 152 ~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~------~~~~~~~~~~~ 225 (251)
.++.++|+. .+..|+.|+|+|+++||++-|||+..++|.+++|++|.|||++||..|||+++ +..+ .++.+
T Consensus 315 N~it~~fC~-~Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLkVV--d~~lp 391 (2376)
T KOG1202|consen 315 NGITRFFCA-TRTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLKVV--DRPLP 391 (2376)
T ss_pred hhHHHHHhh-cCCCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccceeEEe--cCCCC
Confidence 999999997 45568999999999999999999999999999999999999999999999985 2222 23444
Q ss_pred CCCcEEEEecccccceeeeeEeee
Q 040515 226 MPISAALSNSFGFGGTNASLLFTK 249 (251)
Q Consensus 226 ~~~~~~lv~~~g~gG~~~~~vl~~ 249 (251)
.+..++.+|||||||+|+|+||+.
T Consensus 392 ~~GGivGiNSFGFGGsN~HviLks 415 (2376)
T KOG1202|consen 392 WRGGIVGINSFGFGGSNAHVILKS 415 (2376)
T ss_pred ccCceeeeeccccCCCceeEEecc
Confidence 556789999999999999999975
No 27
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=5.7e-41 Score=290.28 Aligned_cols=215 Identities=19% Similarity=0.193 Sum_probs=185.9
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccc-ccc---CCCc
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRP-FDC---GRDG 76 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-f~~---~~~g 76 (251)
||++||+++|+|++.||.+|+++|++|++|++||||+|..+++..+..|..++.++. ..+.| ||. +++|
T Consensus 166 Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~-------~~~~p~~d~~~~~r~G 238 (398)
T PRK06519 166 GSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLK-------GGWAPVWSRGGEDGGG 238 (398)
T ss_pred CccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCC-------CCCCchhccCccCCCC
Confidence 899999999999999999999999999999999999999888888888888888764 23444 554 5888
Q ss_pred c------------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCc
Q 040515 77 F------------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 144 (251)
Q Consensus 77 ~------------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~ 144 (251)
+ ++++|++||++||++|+|++...+ +. ....+.++|++||++||+ ++|||||++|||||+
T Consensus 239 ~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~------~~-~~~~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~ 310 (398)
T PRK06519 239 FILGSGGAFLVLESREHAEARGARPYARISGVESDRA------RR-APGDLEASLERLLKPAGG-LAAPTAVISGATGAH 310 (398)
T ss_pred eeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCC------CC-ChHHHHHHHHHHHHHCCC-cccCCEEEeCCCCCC
Confidence 8 778999999999999999964332 11 335788999999999999 899999999999999
Q ss_pred CCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCC
Q 040515 145 LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASK 224 (251)
Q Consensus 145 ~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~ 224 (251)
.+|..|..||+++|+ .||++.|+++||+++|+|+++++.++++|+++++||++|++ |+ .+.
T Consensus 311 ~~D~~E~~Ai~~~f~-------~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n~~---~~---------~~~ 371 (398)
T PRK06519 311 PATAEEKAALEAALA-------GPVRGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFDAS---GE---------KPM 371 (398)
T ss_pred CccHHHHHHHHHHcC-------CCccccchhhccchHHHHHHHHHHHHHHHhcCccCCCCCCC---cc---------cCc
Confidence 999999999999994 57999999999999999999999999999999999999972 21 223
Q ss_pred CCCCcEEEEecccccceeeeeEeee
Q 040515 225 DMPISAALSNSFGFGGTNASLLFTK 249 (251)
Q Consensus 225 ~~~~~~~lv~~~g~gG~~~~~vl~~ 249 (251)
....+.++++++|++|.-...+++.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (398)
T PRK06519 372 SGAAREAVVTTVGHWRGEGMALVEA 396 (398)
T ss_pred cccccEEEEEeeccCCcceeEEEEe
Confidence 4557889999999998777766664
No 28
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=100.00 E-value=1.7e-32 Score=234.36 Aligned_cols=234 Identities=37% Similarity=0.518 Sum_probs=197.4
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++++.+|+|++.||+.|+++|++|++|.+||+++|....+.........+.. .|+..++||+...+++
T Consensus 87 g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~g 160 (332)
T cd00825 87 GPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALS------TPEKASRTFDAAADGFVFG 160 (332)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhcccc------CCCCCCCCCCCCCCCEEEE
Confidence 6899999999999999999999999999999999999987666544332222222 2557788999888877
Q ss_pred ---------chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH
Q 040515 78 ---------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT 148 (251)
Q Consensus 78 ---------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~ 148 (251)
+.++|.+++.+++++|.++....++.......+....+.++++++|+++|++++|||+++.|+++++..|.
T Consensus 161 dGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~ 240 (332)
T cd00825 161 DGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDV 240 (332)
T ss_pred eeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCH
Confidence 55677888999999999999988876544445556788899999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCC
Q 040515 149 VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPI 228 (251)
Q Consensus 149 ~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
+|..++...+... ++++.+.|..+||+.+|++++++++++++++++.+||++|+.++++.. ..+. .+.+..+.
T Consensus 241 ~e~~~~~~~~~~~----~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~--~~~~-~~~~~~~~ 313 (332)
T cd00825 241 KELKLLRSEFGDK----SPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAG--LNIV-TETTPREL 313 (332)
T ss_pred HHHHHHHHHhCCC----CceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCccc--Cccc-CCCCCCCC
Confidence 9999998877542 478999999999999999999999999999999999999999998833 2222 33444567
Q ss_pred cEEEEecccccceeeeeEe
Q 040515 229 SAALSNSFGFGGTNASLLF 247 (251)
Q Consensus 229 ~~~lv~~~g~gG~~~~~vl 247 (251)
+.++++++|+||+++++||
T Consensus 314 ~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 314 RTALLNGFGLGGTNATLVL 332 (332)
T ss_pred CEEEEeeecCCCeeEEEeC
Confidence 8999999999999999986
No 29
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.97 E-value=1.5e-30 Score=222.73 Aligned_cols=215 Identities=17% Similarity=0.178 Sum_probs=169.0
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
||+++|+++|+|+++||..|+++|++|++|.+||+|+|.++.+..+..|...+.+... ......-|.+.+..+
T Consensus 124 ~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~----~~~~G~v~GEGA~a~vLe 199 (348)
T PRK06147 124 PGSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTS----QNSNGFIPGEAAAAVLLG 199 (348)
T ss_pred CCcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCC----CCCCceeeeceEEEEEEc
Confidence 4679999999999999999999999999999999999998887766666665554321 001111122222222
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCC-CCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQ-PHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRT 156 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~-~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~ 156 (251)
++++|+++++++|+ .|++...++.+... ..+++.++.++++++|+++|++|+|||||++|++||..+|..|..++.+
T Consensus 200 ~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~ 277 (348)
T PRK06147 200 RPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMR 277 (348)
T ss_pred cHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHH
Confidence 66788899999998 56666666543321 2236789999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEecc
Q 040515 157 VFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSF 236 (251)
Q Consensus 157 ~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~ 236 (251)
+|+.... ..|+.+.|+.+||+.+|+|+++++.++++|+++++|+. .+|+.+.
T Consensus 278 ~f~~~~~--~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~--------------------------~~L~~s~ 329 (348)
T PRK06147 278 LFRVRKE--FFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGP--------------------------NVLCHLS 329 (348)
T ss_pred HhhhccC--CCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCC--------------------------cEEEEec
Confidence 9986432 36899999999999999999999999999999987522 4566666
Q ss_pred cccceeeeeEeee
Q 040515 237 GFGGTNASLLFTK 249 (251)
Q Consensus 237 g~gG~~~~~vl~~ 249 (251)
.-.|.-+++||++
T Consensus 330 ~d~g~r~a~~l~~ 342 (348)
T PRK06147 330 DDDGARAALVLEY 342 (348)
T ss_pred CCCCceEEEEEec
Confidence 6677777777764
No 30
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=99.96 E-value=6.2e-30 Score=186.35 Aligned_cols=118 Identities=38% Similarity=0.641 Sum_probs=99.6
Q ss_pred EEEEeeeeecCCC-CCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCcee
Q 040515 90 YAEVRGYGMSGDA-HHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLA 168 (251)
Q Consensus 90 ~a~i~g~~~~~~~-~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~ 168 (251)
|++|+|+++++|+ .+.....++..++.++++++|+++|++|+||||||+||+||+.+|..|..++.++|+....+.+++
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 6899999999999 677778888999999999999999999999999999999999999999999999999765455799
Q ss_pred eecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCC
Q 040515 169 FSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLA 207 (251)
Q Consensus 169 v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~ 207 (251)
|+++|+++||+++|+|++++++++++|++++|||++|++
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~n~~ 119 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHGTIPPTINFE 119 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT-S
T ss_pred eeccccccccccccchHHHHHHHHHHHhcCCCCCCcCCC
Confidence 999999999999999999999999999999999999975
No 31
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.93 E-value=1.7e-24 Score=178.17 Aligned_cols=193 Identities=36% Similarity=0.486 Sum_probs=159.6
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--- 77 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--- 77 (251)
+|+++++.+|+|++.||..|+++|++|++|.+||+++|. ..|.+.+...
T Consensus 59 ~~~~~i~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~----------------------------~~~gdGAaa~vL~ 110 (254)
T cd00327 59 GPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE----------------------------FVFGDGAAAAVVE 110 (254)
T ss_pred CCcceeccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce----------------------------eeecceEEEEEEC
Confidence 588999999999999999999999999999999999997 0122322222
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+.+.+.+++.+++.+|.++....++.... +......+.++++++|+++|++++|||+|++|.+++...|..|..+....
T Consensus 111 ~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~ 189 (254)
T cd00327 111 SEEHALRRGAHPQAEIVSTAATFDGASMV-PAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDP 189 (254)
T ss_pred cHHHHHHCCCceEEEEEEEEEcCCCCCCC-CCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHH
Confidence 44566777888999999988877654322 23456788999999999999999999999999999999999988876554
Q ss_pred hhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccc
Q 040515 158 FSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFG 237 (251)
Q Consensus 158 ~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~g 237 (251)
+... ++++...+..+||+.+|+++..+.+++.+++.+.+||. ..+.+.++++++|
T Consensus 190 ~~~~----~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~---------------------~~~~~~~l~~~~g 244 (254)
T cd00327 190 DGVR----SPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT---------------------PREPRTVLLLGFG 244 (254)
T ss_pred hCCC----CCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCC---------------------CCCcCEEEEeeEc
Confidence 4322 26889999999999999999999999999999998871 1335789999999
Q ss_pred ccceeeeeEe
Q 040515 238 FGGTNASLLF 247 (251)
Q Consensus 238 ~gG~~~~~vl 247 (251)
+||++.++||
T Consensus 245 ~Gg~~~~~~l 254 (254)
T cd00327 245 LGGTNAAVVL 254 (254)
T ss_pred CCCcceEEEC
Confidence 9999999986
No 32
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=99.91 E-value=3e-23 Score=180.11 Aligned_cols=128 Identities=24% Similarity=0.300 Sum_probs=102.2
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++++.+++++|.|++... ..+.+...+...+++++|+++|++|+|||+||.| |+++...+
T Consensus 266 s~e~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~A~~~al~~AGl~~~DID~iei~----------dafa~~~l 330 (400)
T PRK13359 266 SEAAARRHGLKPRARVLGIATAG-----VEPRVMGIGPAPATQKLLARLGMTLDQFDVIELN----------EAFASQGL 330 (400)
T ss_pred cHHHHHHCCCCccEEEEEEEEec-----CCCCccchhHHHHHHHHHHHhCCCHHHcCcCccC----------cHhHHHHH
Confidence 66788889999999999998864 2234455677899999999999999999999998 44443332
Q ss_pred -----hhccCCCCceeeecccCC--ccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcE
Q 040515 158 -----FSDHATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISA 230 (251)
Q Consensus 158 -----~~~~~~~~~~~v~~~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (251)
|+-. .+..|++..++. +|||.+|+|+.+++++++||+. ...++
T Consensus 331 ~~~e~lg~~--~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~----------------------------~~~~~ 380 (400)
T PRK13359 331 AVLRELGLA--DDDARVNPNGGAIALGHPLGASGARLVTTALYQLER----------------------------TGGRF 380 (400)
T ss_pred HHHHHcCCC--CCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhh----------------------------cCCCe
Confidence 3211 123799999995 8999999999999999999985 23567
Q ss_pred EEEecccccceeeeeEeeec
Q 040515 231 ALSNSFGFGGTNASLLFTKC 250 (251)
Q Consensus 231 ~lv~~~g~gG~~~~~vl~~~ 250 (251)
++++.+..||...++|||+.
T Consensus 381 g~~~~c~~gG~g~a~~ie~~ 400 (400)
T PRK13359 381 ALCTMCIGVGQGIAIAIERV 400 (400)
T ss_pred EEEEEcccCCceeEEEEEeC
Confidence 99999999999999999973
No 33
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.90 E-value=3.6e-23 Score=179.01 Aligned_cols=130 Identities=21% Similarity=0.304 Sum_probs=105.9
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++++.+++++|+|++...+. +...+.....+++++|+++||+|+|||++|+| |.+++..+
T Consensus 260 see~A~~~g~~p~a~I~g~~~~~~~-----~~~~~~~~~~a~~~Al~~AGl~p~DID~~ei~----------dafa~~~l 324 (392)
T PRK06633 260 SEEALKKHNLTPLARIVSYASAGVD-----PSIMGTAPVPASQKALSKAGWSVNDLEVIEVN----------EAFAAQSI 324 (392)
T ss_pred cHHHHHHCCCCeeEEEEEEEEecCC-----cchhchHHHHHHHHHHHHcCCCHHHcCeeehh----------hHHHHHHH
Confidence 6677888899999999999987642 22223566889999999999999999999999 88888888
Q ss_pred hhccCC---CCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEe
Q 040515 158 FSDHAT---SGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSN 234 (251)
Q Consensus 158 ~~~~~~---~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 234 (251)
+..... ..+++++..|..+|||+||+|+.+++++++||++. +.++++++
T Consensus 325 ~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~----------------------------~~~~g~~~ 376 (392)
T PRK06633 325 YVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRA----------------------------KAKKGLVT 376 (392)
T ss_pred HHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhc----------------------------CCCeEEEE
Confidence 754211 23466777777899999999999999999999851 24679999
Q ss_pred cccccceeeeeEeeec
Q 040515 235 SFGFGGTNASLLFTKC 250 (251)
Q Consensus 235 ~~g~gG~~~~~vl~~~ 250 (251)
.+..||...++|||+.
T Consensus 377 ~c~~gG~g~a~~~e~~ 392 (392)
T PRK06633 377 LCIGGGMGMAMCVEAV 392 (392)
T ss_pred EecccChhheEEEEeC
Confidence 9999999999999874
No 34
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=99.90 E-value=5e-23 Score=178.71 Aligned_cols=133 Identities=23% Similarity=0.267 Sum_probs=100.8
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++++.+++++|+|++..... +.....+...+++++|+++|++|+|||++|+|+..+. +..+..+.
T Consensus 266 s~e~A~~~g~~~~~~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~Agl~~~DID~~ei~D~f~~-----~~l~~~e~ 335 (400)
T TIGR02430 266 SEEAVQRHGLTPRARILAAATAGVE-----PRIMGIGPVPATQKLLARAGLSIDQFDVIELNEAFAA-----QALAVLRE 335 (400)
T ss_pred cHHHHHHCCCCccEEEEEEEEecCC-----CccccchHHHHHHHHHHHhCCCHHHCCCcccCcHHHH-----HHHHHHHH
Confidence 6677888888889999999876532 2233446788999999999999999999998832211 12222233
Q ss_pred hhccCCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEec
Q 040515 158 FSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNS 235 (251)
Q Consensus 158 ~~~~~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~ 235 (251)
|+-.. ...|++..++ .+|||.+|+|+.+++++++||+. .+.++++++.
T Consensus 336 lG~~~--~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~----------------------------~~~~~g~~~~ 385 (400)
T TIGR02430 336 LGLAD--DDARVNPNGGAIALGHPLGASGARLVLTALRQLER----------------------------SGGRYALCTM 385 (400)
T ss_pred cCCCC--CCCeECCCCchHhccChHHHHHHHHHHHHHHHHHh----------------------------cCCCEEEEEE
Confidence 43211 1268999999 48999999999999999999985 1246789988
Q ss_pred ccccceeeeeEeeec
Q 040515 236 FGFGGTNASLLFTKC 250 (251)
Q Consensus 236 ~g~gG~~~~~vl~~~ 250 (251)
+..||...++|||++
T Consensus 386 c~~gG~g~a~~~e~~ 400 (400)
T TIGR02430 386 CIGVGQGIALAIERV 400 (400)
T ss_pred ccccChhhEEEEEeC
Confidence 899999999999874
No 35
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.89 E-value=1.8e-22 Score=175.74 Aligned_cols=223 Identities=20% Similarity=0.260 Sum_probs=149.0
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHH--------H-----------H-hhhhhcc----c
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA--------G-----------F-CKSRALT----T 57 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~--------~-----------~-~~~~~l~----~ 57 (251)
|+++|+++|+|++.||..|+++|++|++|.+||+|+|+++...... . + ..++... +
T Consensus 77 p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~ 156 (389)
T PRK07516 77 PATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYFQ 156 (389)
T ss_pred ceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999865321100 0 0 0000000 0
Q ss_pred ccC------------------CCCCC-ccccccc------------------------CCCcc------chhhhhhcCCe
Q 040515 58 KYN------------------GTPQE-ASRPFDC------------------------GRDGF------ELEHAKKRGAK 88 (251)
Q Consensus 58 ~~~------------------~~~~~-~~~~f~~------------------------~~~g~------~~~~A~~~g~~ 88 (251)
+++ ..|.. .-+|++. -.+|- +++.|++.+.
T Consensus 157 ~yg~~~e~~a~vav~~~~~A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~~~~- 235 (389)
T PRK07516 157 RYGDQSDALAMIAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARALQR- 235 (389)
T ss_pred HHCCCHHHHHHHHHHHHHhhhcCChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHhcCC-
Confidence 000 00100 0001100 01111 5566766643
Q ss_pred EEEEEeeeeecCCCCCCCCCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHh-h-------
Q 040515 89 IYAEVRGYGMSGDAHHITQPHI-DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVF-S------- 159 (251)
Q Consensus 89 ~~a~i~g~~~~~~~~~~~~~~~-~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~-~------- 159 (251)
.++|+|++...+.......++ .......+++++|+++||+|+|||++|+|++++.. |...++.+- .
T Consensus 236 -~v~i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~----~~~~~e~lg~~~~G~~~~ 310 (389)
T PRK07516 236 -AVRFRARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIA----ELIEYEAMGLAPPGQGAR 310 (389)
T ss_pred -CEEEEEEEeccCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHH----HHHHHHHcCCCCCCchHH
Confidence 578999998877554322222 34677789999999999999999999999999887 555555541 1
Q ss_pred -----ccCCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEE
Q 040515 160 -----DHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAAL 232 (251)
Q Consensus 160 -----~~~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 232 (251)
....++.+||+...+ .+|||.+|+|+.+++++++||++.. ...|..+.++++
T Consensus 311 ~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~g~a---------------------g~rQv~~a~~~l 369 (389)
T PRK07516 311 AIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLTGEA---------------------GGMQIPGAKLAG 369 (389)
T ss_pred HHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhcCCc---------------------cCCcCCchheee
Confidence 112345689988777 4699999999999999999999854 234455678999
Q ss_pred Eeccc-ccceeeeeEeeecC
Q 040515 233 SNSFG-FGGTNASLLFTKCQ 251 (251)
Q Consensus 233 v~~~g-~gG~~~~~vl~~~~ 251 (251)
+++.| .+.++..+||++.+
T Consensus 370 ~~~~gg~~~~~~~~vl~~~~ 389 (389)
T PRK07516 370 VFNMGGAAVANYVSILERVK 389 (389)
T ss_pred eeccCcccceEEEEEEEecC
Confidence 99887 44456667777653
No 36
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.89 E-value=2.4e-22 Score=174.70 Aligned_cols=223 Identities=17% Similarity=0.190 Sum_probs=148.2
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHH-----------Hh--hhh--------hcc----
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAG-----------FC--KSR--------ALT---- 56 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~-----------~~--~~~--------~l~---- 56 (251)
|.++|+++|+|++.||..|+++|++|++|.+||+|+|.+........ +. ..+ .+.
T Consensus 74 ~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m 153 (385)
T PRK12578 74 VPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHM 153 (385)
T ss_pred CeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999998654211000 00 000 000
Q ss_pred cccCC------------------CCCC------------------------cccccccCCCcc---chhhhhhcCCeEEE
Q 040515 57 TKYNG------------------TPQE------------------------ASRPFDCGRDGF---ELEHAKKRGAKIYA 91 (251)
Q Consensus 57 ~~~~~------------------~~~~------------------------~~~~f~~~~~g~---~~~~A~~~g~~~~a 91 (251)
..++. .|.. .|-|+.+.+..+ +++.|++.+.++.+
T Consensus 154 ~~~g~t~e~~a~va~~~~~~A~~np~a~~~~~i~~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~ 233 (385)
T PRK12578 154 AVYGTTEEQMALVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPIKLLDSCPISDGSATAIFASEEKVKELKIDSPV 233 (385)
T ss_pred HHhCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCccCCCccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCe
Confidence 00000 0000 000000000001 55667777755678
Q ss_pred EEeeeeecCCCCCCC-CCCCCh-HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHh-hcc-------
Q 040515 92 EVRGYGMSGDAHHIT-QPHIDG-KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVF-SDH------- 161 (251)
Q Consensus 92 ~i~g~~~~~~~~~~~-~~~~~~-~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~-~~~------- 161 (251)
+|+|++..++..... .++... .....+++++|++||++|+|||++|+|++++.. |..+++.+- ..+
T Consensus 234 ~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft~~----~l~~le~lGl~~~G~~~~~~ 309 (385)
T PRK12578 234 WITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFTIA----EIMGYEDLGFTEKGKGGKFI 309 (385)
T ss_pred EEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH----HHHHHHHcCCCCCCchHHHH
Confidence 999999887654432 222222 356789999999999999999999999999865 888777662 211
Q ss_pred -----CCCCceeeecccCC--ccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCC-CCcEEEE
Q 040515 162 -----ATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDM-PISAALS 233 (251)
Q Consensus 162 -----~~~~~~~v~~~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lv 233 (251)
..++++||+...+. +|||.+|+|+.+++++++||+... ...|.. ..+.+++
T Consensus 310 ~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~a---------------------g~~qv~~~~~~~l~ 368 (385)
T PRK12578 310 EEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDEA---------------------GKLQQPLKKYIGLV 368 (385)
T ss_pred HCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCCc---------------------ccCcCCcchheEEE
Confidence 33466899999984 599999999999999999999743 122223 2468999
Q ss_pred eccc-ccceeeeeEeee
Q 040515 234 NSFG-FGGTNASLLFTK 249 (251)
Q Consensus 234 ~~~g-~gG~~~~~vl~~ 249 (251)
++.| .+.++.++||+|
T Consensus 369 ~~~Gg~~~~~~~~v~~~ 385 (385)
T PRK12578 369 HNVGGTGHFAYVMILRR 385 (385)
T ss_pred eccCcchhhEEEEEEeC
Confidence 8887 454566666654
No 37
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=99.89 E-value=3.6e-22 Score=173.50 Aligned_cols=128 Identities=26% Similarity=0.290 Sum_probs=100.0
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++.+.+++++|+|++..... +.....+...+++++|+++||+++|||++|.| |.+++..+
T Consensus 267 s~~~A~~lg~~p~a~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~Agl~~~DId~~ei~----------D~f~~~~l 331 (401)
T PRK09050 267 SEAAAKKHGLTPRARILGMATAGVE-----PRIMGIGPAPATRKLLARLGLTIDQFDVIELN----------EAFAAQGL 331 (401)
T ss_pred cHHHHHHCCCCccEEEEEEEEeccC-----CccccchHHHHHHHHHHHcCCCHHHCCccccC----------cHhHHHHH
Confidence 6677888888889999999887532 22233456789999999999999999999999 44333222
Q ss_pred -----hhccCCCCceeeecccCC--ccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcE
Q 040515 158 -----FSDHATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISA 230 (251)
Q Consensus 158 -----~~~~~~~~~~~v~~~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (251)
|+-. ....|++..++. +|||.+|+|+.+++++++||+. ...++
T Consensus 332 ~~~e~lg~~--~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~----------------------------~~~~~ 381 (401)
T PRK09050 332 AVLRQLGLA--DDDARVNPNGGAIALGHPLGMSGARLVLTALHQLER----------------------------TGGRY 381 (401)
T ss_pred HHHHHcCCC--CCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHh----------------------------cCCCe
Confidence 2211 113799999995 8999999999999999999986 22567
Q ss_pred EEEecccccceeeeeEeeec
Q 040515 231 ALSNSFGFGGTNASLLFTKC 250 (251)
Q Consensus 231 ~lv~~~g~gG~~~~~vl~~~ 250 (251)
++++.+..||...++|||++
T Consensus 382 g~~~~c~~gG~g~a~~~e~~ 401 (401)
T PRK09050 382 ALCTMCIGVGQGIALAIERV 401 (401)
T ss_pred EEEEEcccccceeEEEEEeC
Confidence 99999999999999999974
No 38
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.89 E-value=5.5e-22 Score=172.55 Aligned_cols=132 Identities=21% Similarity=0.311 Sum_probs=109.1
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++++.+++++|.|++.... .+.+...+...+++++|+++|++|+|||++|+|++ +..|..++.+.
T Consensus 261 s~~~A~~~g~~~~a~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~dId~~e~~d~-----f~~~~~~~~e~ 330 (393)
T PRK05656 261 SAAKAKALGLPVLAKIAAYANAGV-----DPAIMGIGPVSATRRCLDKAGWSLAELDLIEANEA-----FAAQSLAVGKE 330 (393)
T ss_pred cHHHHHHCCCCeeEEEEEEEEecC-----CCcccchhHHHHHHHHHHHcCCCHHHCCEEEecCc-----cHHHHHHHHHH
Confidence 667888999999999999987652 34444557788999999999999999999999965 44577777777
Q ss_pred hhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccc
Q 040515 158 FSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFG 237 (251)
Q Consensus 158 ~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~g 237 (251)
|+-.. .+++++..|..+|||++|+|+.++++++++|+. .+.|+++++.+.
T Consensus 331 lg~~~--~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~----------------------------~~~~~gl~~~c~ 380 (393)
T PRK05656 331 LGWDA--AKVNVNGGAIALGHPIGASGCRVLVTLLHEMIR----------------------------RDAKKGLATLCI 380 (393)
T ss_pred hCCCC--ccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHH----------------------------cCCCEEEEEEcc
Confidence 76422 357788888899999999999999999998864 235789999999
Q ss_pred ccceeeeeEeee
Q 040515 238 FGGTNASLLFTK 249 (251)
Q Consensus 238 ~gG~~~~~vl~~ 249 (251)
.||...++|||+
T Consensus 381 ~gG~g~a~~~e~ 392 (393)
T PRK05656 381 GGGQGVALAIER 392 (393)
T ss_pred cCcceEEEEEec
Confidence 999999999986
No 39
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.89 E-value=8.5e-22 Score=171.61 Aligned_cols=226 Identities=21% Similarity=0.317 Sum_probs=150.5
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhh--HHH---------Hh---------hhhhcc----
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS--MAG---------FC---------KSRALT---- 56 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~--~~~---------~~---------~~~~l~---- 56 (251)
+|+++|+++|+|++.||..|+++|++|++|++||+|.|++..... ... +. ..+.+.
T Consensus 76 ~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~ 155 (389)
T PRK06064 76 IPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYM 155 (389)
T ss_pred CCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHH
Confidence 378899999999999999999999999999999999987442110 000 00 000000
Q ss_pred cccCCC------------------CC------------------------CcccccccCCCcc---chhhhhhcCCeEEE
Q 040515 57 TKYNGT------------------PQ------------------------EASRPFDCGRDGF---ELEHAKKRGAKIYA 91 (251)
Q Consensus 57 ~~~~~~------------------~~------------------------~~~~~f~~~~~g~---~~~~A~~~g~~~~a 91 (251)
..++.+ |. ..+-++.+++..+ +.+.|++++.++ +
T Consensus 156 ~~yG~s~e~~a~~a~~~~~~A~~np~a~~~~~~t~~~~~~s~~i~~Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~-v 234 (389)
T PRK06064 156 HKYGTTEEDLALVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPLKLLDCSPITDGAAAVILASEEKAKEYTDTP-V 234 (389)
T ss_pred HHHCCCHHHHHHHHHHHHHHHhhCcHhhhCCCCCHHHHhcCCcccCCCchhhcCCCCCcceEEEEecHHHHHHhcCCC-e
Confidence 000000 00 0011111122222 667788776555 5
Q ss_pred EEeeeeecCCCCCCCC-CC-CChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH-hh---------
Q 040515 92 EVRGYGMSGDAHHITQ-PH-IDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV-FS--------- 159 (251)
Q Consensus 92 ~i~g~~~~~~~~~~~~-~~-~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~-~~--------- 159 (251)
+|+|++...+..+... ++ ........+++++|+++||+++|||++|+|++++.. +..+++.+ |.
T Consensus 235 ~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~~----~~~~~e~lgl~~~G~~~~~~ 310 (389)
T PRK06064 235 WIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTIA----EILAYEDLGFAKKGEGGKLA 310 (389)
T ss_pred EEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcHH----HHHHHHHcCCCCCCchHHHH
Confidence 9999998877654322 11 134567789999999999999999999999999974 54444444 21
Q ss_pred ---ccCCCCceeeecccCC--ccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEe
Q 040515 160 ---DHATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSN 234 (251)
Q Consensus 160 ---~~~~~~~~~v~~~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 234 (251)
....++.+||+..++. +|||.+++|+.+++++++||+++.- . ..+|..+.+.++++
T Consensus 311 ~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~------------------~-g~rqv~~a~~~l~~ 371 (389)
T PRK06064 311 REGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAE------------------K-GRQQVIGAGYGLTH 371 (389)
T ss_pred HCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCC------------------C-CCccCCCccEEEEe
Confidence 1112346899999996 6999999999999999999997420 0 12344567899999
Q ss_pred cccc-cceeeeeEeeec
Q 040515 235 SFGF-GGTNASLLFTKC 250 (251)
Q Consensus 235 ~~g~-gG~~~~~vl~~~ 250 (251)
++|. +..++.+||++.
T Consensus 372 ~~g~~~~~~~~~vl~~~ 388 (389)
T PRK06064 372 NVGGTGHTAVVHILSRK 388 (389)
T ss_pred cCCCccceEEEEEEEec
Confidence 8874 456677777764
No 40
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.88 E-value=1.2e-21 Score=170.25 Aligned_cols=131 Identities=23% Similarity=0.326 Sum_probs=101.2
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++++.+++++|.|++.... .+.....+...+++++|++|||+|+|||+||+|+..+. +..+..+.
T Consensus 267 se~~a~~~g~~~~a~i~g~~~~~~-----~~~~~~~~~~~A~~~al~~Agi~~~did~~ei~D~f~~-----~~l~~~e~ 336 (399)
T PRK09052 267 SEKALKQFNLTPLARFVSFAVAGV-----PPEIMGIGPIEAIPAALKQAGLKQDDLDWIELNEAFAA-----QSLAVIRD 336 (399)
T ss_pred cHHHHHHCCCCeeEEEEEEEEecc-----CCCccchhHHHHHHHHHHHcCCCHHHcCEEEeCcHHHH-----HHHHHHHH
Confidence 667888889899999999998763 23334457789999999999999999999999922211 11122222
Q ss_pred hhccCCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEec
Q 040515 158 FSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNS 235 (251)
Q Consensus 158 ~~~~~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~ 235 (251)
|+- .+.|++..++ .+|||.||+|+.+++.+++||+++ +.++++++.
T Consensus 337 lg~----~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~----------------------------~~~~g~~~~ 384 (399)
T PRK09052 337 LGL----DPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRT----------------------------NLKYGMVTM 384 (399)
T ss_pred hCC----CCcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhc----------------------------CCCeEEEEE
Confidence 332 1257888888 789999999999999999999861 246899999
Q ss_pred ccccceeeeeEeeec
Q 040515 236 FGFGGTNASLLFTKC 250 (251)
Q Consensus 236 ~g~gG~~~~~vl~~~ 250 (251)
++.||...++|||+.
T Consensus 385 c~~gg~g~a~~~e~~ 399 (399)
T PRK09052 385 CVGTGMGAAGIFERL 399 (399)
T ss_pred cccCCceeEEEEEeC
Confidence 999999999999873
No 41
>PRK09051 beta-ketothiolase; Provisional
Probab=99.88 E-value=4.2e-21 Score=166.78 Aligned_cols=131 Identities=25% Similarity=0.390 Sum_probs=102.2
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++++.+++++|+|++..... +.........+++++|++||++|+|||+||+|+.. .++..+..+.
T Consensus 262 s~~~a~~~g~~~~~~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~agi~~~did~~ei~d~f-----~~~~~~~~e~ 331 (394)
T PRK09051 262 EADAAEARGLKPLARLVGYAHAGVD-----PEYMGIGPVPATQKALERAGLTVADLDVIEANEAF-----AAQACAVTRE 331 (394)
T ss_pred cHHHHHHCCCCccEEEEEEEEeccC-----CCcccccHHHHHHHHHHHcCCCHHHcCEEEecCcc-----HHHHHHHHHH
Confidence 6677888898999999999987642 22334466889999999999999999999999543 3344444455
Q ss_pred hhccCCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEec
Q 040515 158 FSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNS 235 (251)
Q Consensus 158 ~~~~~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~ 235 (251)
|+-. +.||+..++ .+|||+||+|+.++++++++|++ .+.++++++.
T Consensus 332 lg~~----~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~----------------------------~~~~~g~~~~ 379 (394)
T PRK09051 332 LGLD----PAKVNPNGSGISLGHPVGATGAIITVKALYELQR----------------------------IGGRYALVTM 379 (394)
T ss_pred hCCC----ccccCCCccHHHhcchHHHHHHHHHHHHHHHHHh----------------------------cCCCEEEEEE
Confidence 5422 136666666 58999999999999999999985 1246899999
Q ss_pred ccccceeeeeEeeec
Q 040515 236 FGFGGTNASLLFTKC 250 (251)
Q Consensus 236 ~g~gG~~~~~vl~~~ 250 (251)
+..||...++|||+.
T Consensus 380 c~~gG~g~a~~~e~~ 394 (394)
T PRK09051 380 CIGGGQGIAAIFERL 394 (394)
T ss_pred ccccChhhEEEEEeC
Confidence 999999999999974
No 42
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=99.87 E-value=1.7e-21 Score=168.78 Aligned_cols=133 Identities=21% Similarity=0.280 Sum_probs=98.1
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++++.+++++|+|++...... .........+++++|+++||+|+|||++|+|...+.. |...++.+
T Consensus 250 s~e~A~~~g~~~~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~~----~l~~~e~l 320 (385)
T TIGR02445 250 SEQRANELGLKPRARIRSMAVAGCDP-----SIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQ----ALPCLKDL 320 (385)
T ss_pred cHHHHHHCCCCeeEEEEEEEEcCCCC-----cccchhHHHHHHHHHHHcCCCHHHcCEEEEccccHHH----HHHHHHHc
Confidence 66778888889999999999875321 1122356789999999999999999999999555443 44444433
Q ss_pred -hhccCCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEe
Q 040515 158 -FSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSN 234 (251)
Q Consensus 158 -~~~~~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 234 (251)
|... +..|++...+ .+|||.||||+..++.+++.|++ .+.++++++
T Consensus 321 g~~~~---g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~----------------------------~~~~~Gl~~ 369 (385)
T TIGR02445 321 GLLDK---MDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQ----------------------------KDATFGLAT 369 (385)
T ss_pred CCCCC---CCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh----------------------------cCCCeEEEE
Confidence 1111 1257777777 46999999999999888855532 234689999
Q ss_pred cccccceeeeeEeeec
Q 040515 235 SFGFGGTNASLLFTKC 250 (251)
Q Consensus 235 ~~g~gG~~~~~vl~~~ 250 (251)
+++.+|...++|||++
T Consensus 370 ~~~g~g~g~a~~~e~~ 385 (385)
T TIGR02445 370 MCIGLGQGIATVFERV 385 (385)
T ss_pred EecccChhheEEEEeC
Confidence 9999999999999974
No 43
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=99.87 E-value=1.3e-21 Score=170.01 Aligned_cols=130 Identities=24% Similarity=0.284 Sum_probs=100.2
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++.+.+++++|.|++...+. +.....+...+++++|+++||+|+|||++|+| |++++..+
T Consensus 266 s~~~a~~~~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~a~~~agl~~~did~~ei~----------d~Fa~~~l 330 (401)
T PRK08131 266 SRAAGEKYGLKPMARILSSAAAGVE-----PRIMGIGPVEAIKKALARAGLTLDDMDIIEIN----------EAFASQVL 330 (401)
T ss_pred eHHHHHHcCCCceEEEEEEEEeccC-----CccccchHHHHHHHHHHHcCCCHHHCCeehhc----------cHHHHHHH
Confidence 6677888888889999999887642 22233467889999999999999999999999 66666655
Q ss_pred hhccCCC---CceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEE
Q 040515 158 FSDHATS---GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAAL 232 (251)
Q Consensus 158 ~~~~~~~---~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 232 (251)
......+ ...||+..++ .+|||.||+|+.+++++++||+..- .++++
T Consensus 331 ~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~~~----------------------------~~~~~ 382 (401)
T PRK08131 331 GCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQRRG----------------------------KRYAV 382 (401)
T ss_pred HHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHhcC----------------------------CCceE
Confidence 4211111 2478999999 5799999999999999999998621 24466
Q ss_pred EecccccceeeeeEeeec
Q 040515 233 SNSFGFGGTNASLLFTKC 250 (251)
Q Consensus 233 v~~~g~gG~~~~~vl~~~ 250 (251)
+..+..+|...++|||+.
T Consensus 383 ~~~~~ggg~g~a~i~e~~ 400 (401)
T PRK08131 383 VSLCIGVGQGLAMVIERV 400 (401)
T ss_pred EEEEecCChhhEEEEEec
Confidence 666777888899999874
No 44
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.87 E-value=2.4e-21 Score=168.15 Aligned_cols=129 Identities=24% Similarity=0.343 Sum_probs=98.6
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++.+.+++++|+|++...+. +.....+...+++++|+++||+++|||+||+| |.++...+
T Consensus 259 s~~~A~~~g~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~did~~ei~----------d~f~~~~l 323 (391)
T PRK07661 259 DREKAESDGLKPLAKFRSFAVAGVP-----PEVMGIGPIAAIPKALKLAGLELSDIGLFELN----------EAFASQSI 323 (391)
T ss_pred cHHHHHHCCCCceEEEEEEEEecCC-----CcccchHHHHHHHHHHHHcCCCHHHCCEEEeC----------CHHHHHHH
Confidence 6778889999999999999988642 22334467889999999999999999999999 44444333
Q ss_pred hh--ccC-CCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEe
Q 040515 158 FS--DHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSN 234 (251)
Q Consensus 158 ~~--~~~-~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 234 (251)
.. ... ...++.+...+..+|||.+|||+.+++++++||++ .+.++++.+
T Consensus 324 ~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~----------------------------~~~~~g~~~ 375 (391)
T PRK07661 324 QVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKR----------------------------RNEQFGIVT 375 (391)
T ss_pred HHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHh----------------------------cCCCeEEEE
Confidence 21 111 11234444455578999999999999999999975 124689999
Q ss_pred cccccceeeeeEeee
Q 040515 235 SFGFGGTNASLLFTK 249 (251)
Q Consensus 235 ~~g~gG~~~~~vl~~ 249 (251)
.+..||...++|||+
T Consensus 376 ~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 376 MCIGGGMGAAGVFEL 390 (391)
T ss_pred EccccChhhEEEEEe
Confidence 999999999999986
No 45
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.87 E-value=1.5e-21 Score=169.83 Aligned_cols=132 Identities=23% Similarity=0.344 Sum_probs=99.6
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++++.+++++|+|++..++... ....+...+++++|+++||+|+|||++|+|++++.. |...++.
T Consensus 255 s~~~a~~~~~~~~~~I~g~~~~~~~~~-----~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f~~~----~~~~~e~- 324 (386)
T cd00751 255 SEEKAKELGLKPLARIVGYAVAGVDPA-----IMGIGPVPAIPKALKRAGLTLDDIDLIEINEAFAAQ----ALACLKE- 324 (386)
T ss_pred cHHHHHHCCCCeeEEEEEEEEccCCCc-----ccchhHHHHHHHHHHHcCCCHHHcCEEEeechhHHH----HHHHHHH-
Confidence 667888889999999999998876432 233456789999999999999999999999554422 3332222
Q ss_pred hhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccc
Q 040515 158 FSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFG 237 (251)
Q Consensus 158 ~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~g 237 (251)
|+-.. .++++...+.++||+.+|+|+.+++++++||+.. ..++++++..+
T Consensus 325 lg~~~--~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~----------------------------~~~~gl~~~~~ 374 (386)
T cd00751 325 LGLDP--EKVNVNGGAIALGHPLGASGARIVVTLLHELKRR----------------------------GGRYGLATMCI 374 (386)
T ss_pred hCCCh--hhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhc----------------------------CCCEEEEEEcc
Confidence 22111 1233333444789999999999999999999862 35789999999
Q ss_pred ccceeeeeEeee
Q 040515 238 FGGTNASLLFTK 249 (251)
Q Consensus 238 ~gG~~~~~vl~~ 249 (251)
.||..+++|||+
T Consensus 375 ~gg~g~~~~ie~ 386 (386)
T cd00751 375 GGGQGAAMVIER 386 (386)
T ss_pred cccceEEEEEEC
Confidence 999999999985
No 46
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.87 E-value=2e-21 Score=168.69 Aligned_cols=129 Identities=24% Similarity=0.352 Sum_probs=103.8
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++++.+++++|+|++...+ .|.....+...+++++|+++|++|+|||++|.| |++++..+
T Consensus 260 s~~~A~~~g~~~~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~Did~~ei~----------eafa~~~l 324 (392)
T PRK07108 260 NAKVAEREGLQPLGIFRGFAVAGC-----EPDEMGIGPVFAVPKLLKQAGLKVDDIDLWELN----------EAFAVQVL 324 (392)
T ss_pred cHHHHHHCCCCceEEEEEEEEecc-----CCcccchhHHHHHHHHHHHcCCCHHHcCchHhh----------hHHHHHHH
Confidence 667888889899999999998763 233444567899999999999999999999999 99999888
Q ss_pred hhccCCC---CceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEe
Q 040515 158 FSDHATS---GSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSN 234 (251)
Q Consensus 158 ~~~~~~~---~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 234 (251)
+.-...+ .++.++..+-.+|||.||+|+..++.++.+|++ .+.++++++
T Consensus 325 ~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~----------------------------~~~~~g~~~ 376 (392)
T PRK07108 325 YCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKR----------------------------RGAKYVVVT 376 (392)
T ss_pred HHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHh----------------------------hCCCEEEEE
Confidence 7532211 234444444578999999999999999999975 124689999
Q ss_pred cccccceeeeeEeee
Q 040515 235 SFGFGGTNASLLFTK 249 (251)
Q Consensus 235 ~~g~gG~~~~~vl~~ 249 (251)
.+..||...++|||+
T Consensus 377 ~c~~gg~g~a~~ie~ 391 (392)
T PRK07108 377 MCIGGGQGAAGLFEV 391 (392)
T ss_pred EccccChhhEEEEEe
Confidence 999999999999986
No 47
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=99.87 E-value=8.2e-21 Score=166.60 Aligned_cols=229 Identities=17% Similarity=0.236 Sum_probs=144.4
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhh--------------------hhcc----c
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKS--------------------RALT----T 57 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~--------------------~~l~----~ 57 (251)
|+++|+.+|+|++.||..|+++|++|.+|++||+|+|++.+.......... +.+. +
T Consensus 91 ~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ry~~ 170 (430)
T PRK06365 91 PSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAVRHMY 170 (430)
T ss_pred ceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999999986653211000000 0000 0
Q ss_pred ccCCCCCC------------cccccccC---------------------------CCcc------chhhhhhcCCeEEEE
Q 040515 58 KYNGTPQE------------ASRPFDCG---------------------------RDGF------ELEHAKKRGAKIYAE 92 (251)
Q Consensus 58 ~~~~~~~~------------~~~~f~~~---------------------------~~g~------~~~~A~~~g~~~~a~ 92 (251)
.++.+.+. ...||... .+|- +++.|++.+.++ .+
T Consensus 171 ~yG~t~e~la~vav~~~~~A~~NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~p-v~ 249 (430)
T PRK06365 171 EFGTTVEQLAKVSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDKP-VL 249 (430)
T ss_pred HHCCCHHHHHHHHHHHHHHHhhCcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCCC-eE
Confidence 00000000 00010000 0110 556676666555 45
Q ss_pred EeeeeecCCCCCCCC----------------------C-CCChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCcCCc
Q 040515 93 VRGYGMSGDAHHITQ----------------------P-HIDGKGAILAMTRALKQSGLQ--SHQVDYVNAHATSTPLGD 147 (251)
Q Consensus 93 i~g~~~~~~~~~~~~----------------------~-~~~~~~~~~a~~~al~~Agi~--~~dId~i~~h~~gt~~~D 147 (251)
|++++..+++..... + .........+++++|+++||+ ++|||++|+|+..+..
T Consensus 250 i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~~-- 327 (430)
T PRK06365 250 IKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTSS-- 327 (430)
T ss_pred EEEEEEeccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcHH--
Confidence 666665544321110 0 012234568999999999997 7999999999887766
Q ss_pred HHHHHHHHHH-hhc------------cCCCCceeeecccCC--ccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCC
Q 040515 148 TVEATAIRTV-FSD------------HATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPI 212 (251)
Q Consensus 148 ~~E~~a~~~~-~~~------------~~~~~~~~v~~~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~ 212 (251)
|...++.+ |.. ...++++||+...+. .||+.||+|+.+++++++||+...-+..
T Consensus 328 --~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp~GatG~~~~~e~~~QLrG~a~~~~--------- 396 (430)
T PRK06365 328 --EIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHAVGATGIMQAVFMFWQLQGRIKKHF--------- 396 (430)
T ss_pred --HHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCcccHHHHHHHHHHHHHHhcccCCCC---------
Confidence 66666555 111 123456899998885 5999999999999999999998541100
Q ss_pred CCCCCCcccc-CCCCCCcEEEEeccc-ccceeeeeEeeecC
Q 040515 213 FNDNFMPLTA-SKDMPISAALSNSFG-FGGTNASLLFTKCQ 251 (251)
Q Consensus 213 ~~~~~~~~~~-~~~~~~~~~lv~~~g-~gG~~~~~vl~~~~ 251 (251)
- .. .|..+.+.+++++.| .+..+.++||++++
T Consensus 397 ------~-~~~rQv~~a~~~l~~~~gg~~~~~~~~vl~~~~ 430 (430)
T PRK06365 397 ------H-DDYLQVKNAKRGLIHSHAGTGTYVTVTILEAPK 430 (430)
T ss_pred ------C-cccccCCCccEEEEecCCcccceEEEEEEecCC
Confidence 0 01 244567789999887 44567778888764
No 48
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.87 E-value=4.3e-21 Score=166.43 Aligned_cols=133 Identities=22% Similarity=0.278 Sum_probs=99.5
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++.+.+++++|+|++.+..... ........+++++|+++|++|+|||++|+|...+.. |...++.+
T Consensus 252 s~~~A~~~g~~p~~~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agl~~~DId~~El~d~F~~~----~l~~~e~l 322 (387)
T PRK08947 252 SESRAKELGLKPRARIRSMAVAGCDPS-----IMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQ----SLPCLKDL 322 (387)
T ss_pred cHHHHHHCCCCccEEEEEEEEcCcCcc-----cccccHHHHHHHHHHHcCCCHHHCCEEEecccchHH----HHHHHHHc
Confidence 667788888888899999998743211 112235788999999999999999999999665554 55555444
Q ss_pred -hhccCCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEe
Q 040515 158 -FSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSN 234 (251)
Q Consensus 158 -~~~~~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 234 (251)
|... ...|++...+ .+|||.||+|+.+++.++++|+. .+.++++++
T Consensus 323 g~~~~---~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~----------------------------~~~~~gl~~ 371 (387)
T PRK08947 323 GLLDK---MDEKVNLNGGAIALGHPLGCSGARISTTLLNLMER----------------------------KDAQFGLAT 371 (387)
T ss_pred CCCCC---CCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh----------------------------cCCCEEEEE
Confidence 2121 1146666666 56999999999999999999975 235789999
Q ss_pred cccccceeeeeEeeec
Q 040515 235 SFGFGGTNASLLFTKC 250 (251)
Q Consensus 235 ~~g~gG~~~~~vl~~~ 250 (251)
+++.+|...++||+++
T Consensus 372 ~~~g~G~g~a~~~e~~ 387 (387)
T PRK08947 372 MCIGLGQGIATVFERV 387 (387)
T ss_pred EeecccceeEEEEEeC
Confidence 9998888888998864
No 49
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.86 E-value=3.2e-21 Score=167.25 Aligned_cols=130 Identities=23% Similarity=0.212 Sum_probs=98.3
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+.+.|++++.+++++|.|++...+.. .....+...+++++|+++|++++|||++|+| |+++...+
T Consensus 270 s~e~A~~~g~~p~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~AGl~~~DID~~ei~----------daFa~~~l 334 (402)
T PRK08242 270 SEEAGKALGLKPRARIVATATIGSDP-----TIMLTGPVPATRKALAKAGLTVDDIDLFELN----------EAFASVVL 334 (402)
T ss_pred cHHHHHHcCCCCcEEEEEEEEecCCc-----hhhcccHHHHHHHHHHHcCCCHHHCCEEEec----------chhhHHHH
Confidence 66788899988899999998875422 1123345679999999999999999999999 55444333
Q ss_pred hhccC---CCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEe
Q 040515 158 FSDHA---TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSN 234 (251)
Q Consensus 158 ~~~~~---~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 234 (251)
..... ...++.+...+..+|||+||+|+.+++.++++|++ .+.++++++
T Consensus 335 ~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~----------------------------~~~~~g~~~ 386 (402)
T PRK08242 335 RFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELER----------------------------RGKRTALIT 386 (402)
T ss_pred HHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHh----------------------------cCCCeEEEE
Confidence 21100 11235555555588999999999999999999975 234789999
Q ss_pred cccccceeeeeEeeec
Q 040515 235 SFGFGGTNASLLFTKC 250 (251)
Q Consensus 235 ~~g~gG~~~~~vl~~~ 250 (251)
.+..||...++|||+.
T Consensus 387 ~c~ggG~g~a~~~e~~ 402 (402)
T PRK08242 387 LCVGGGMGIATIIERV 402 (402)
T ss_pred EcccCCceeEEEEEeC
Confidence 9999999999999973
No 50
>PRK08256 lipid-transfer protein; Provisional
Probab=99.86 E-value=7.2e-21 Score=165.77 Aligned_cols=223 Identities=20% Similarity=0.260 Sum_probs=147.3
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHH---H----Hhh--------------------hhh
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA---G----FCK--------------------SRA 54 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~---~----~~~--------------------~~~ 54 (251)
|.++|+++|+|++.||..|+++|++|++|.+||+|+|.+....... . +.. ++.
T Consensus 72 ~~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 151 (391)
T PRK08256 72 PIVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGG 151 (391)
T ss_pred CCcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHH
Confidence 7789999999999999999999999999999999999864311000 0 000 000
Q ss_pred c----ccccCCCCCC------------cccccccC---------------------------CCcc------chhhhhhc
Q 040515 55 L----TTKYNGTPQE------------ASRPFDCG---------------------------RDGF------ELEHAKKR 85 (251)
Q Consensus 55 l----~~~~~~~~~~------------~~~~f~~~---------------------------~~g~------~~~~A~~~ 85 (251)
. .+.++.+++. ...|.... .+|- +.+.|++.
T Consensus 152 ~a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~a~~~ 231 (391)
T PRK08256 152 AGREHMEKYGTTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKH 231 (391)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHHHHhc
Confidence 0 0000000000 00000000 0000 55667666
Q ss_pred CCeEEEEEeeeeecCCCCCCCCC-C---C-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH-hh
Q 040515 86 GAKIYAEVRGYGMSGDAHHITQP-H---I-DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV-FS 159 (251)
Q Consensus 86 g~~~~a~i~g~~~~~~~~~~~~~-~---~-~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~-~~ 159 (251)
+.+++++|.|.+...+....... + . .......+++++|+++|++++|||++|+|...+.. |...++.+ |.
T Consensus 232 ~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f~~~----~l~~le~lg~~ 307 (391)
T PRK08256 232 GLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDCFSAN----ELLTYEALGLC 307 (391)
T ss_pred CCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccCCcHH----HHHHHHHcCCC
Confidence 64667899998877664322111 1 1 12345679999999999999999999999888776 66666665 22
Q ss_pred c------------cCCCCceeeecccCC--ccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCC
Q 040515 160 D------------HATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 225 (251)
Q Consensus 160 ~------------~~~~~~~~v~~~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~ 225 (251)
. ...++.+||+...+. +|||.+|+|+.+++++++||+.+. ...|.
T Consensus 308 ~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~g~a---------------------g~~Qv 366 (391)
T PRK08256 308 PEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTA---------------------GARQV 366 (391)
T ss_pred CCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhcCCc---------------------CCCcC
Confidence 1 223467899999985 599999999999999999999753 23344
Q ss_pred CCCcEEEEecccccceeeeeEeee
Q 040515 226 MPISAALSNSFGFGGTNASLLFTK 249 (251)
Q Consensus 226 ~~~~~~lv~~~g~gG~~~~~vl~~ 249 (251)
.+.+.+++++.|.+.++...||++
T Consensus 367 ~~~~~~l~~~~G~~~~~~~~v~~~ 390 (391)
T PRK08256 367 EGARLALQHNLGLGGACVVTLYQR 390 (391)
T ss_pred CccceEEEeccccceeEEEEEEec
Confidence 567899999999665666666654
No 51
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.86 E-value=3.9e-21 Score=166.57 Aligned_cols=131 Identities=18% Similarity=0.261 Sum_probs=98.4
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++.+.++.++|+|++..... +.....+...+++++|+++|++|+|||++|+|...+.. |...++.
T Consensus 255 see~A~~l~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~F~~~----~l~~~e~- 324 (387)
T PRK07850 255 DEDRARALGLRPRARIVAQALVGAE-----PYYHLDGPVQATAKVLEKAGMKIGDIDLVEINEAFASV----VLSWAQV- 324 (387)
T ss_pred cHHHHHHcCCCCcEEEEEEEEeccC-----chhhcchHHHHHHHHHHHcCCCHHHcCeeeecccchHH----HHHHHHH-
Confidence 6677888887788999998865421 22223456789999999999999999999999555443 3333322
Q ss_pred hhccCCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEec
Q 040515 158 FSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNS 235 (251)
Q Consensus 158 ~~~~~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~ 235 (251)
++-. .-|++...+ .+|||.+|+|+.+++++++||+. ...++++++.
T Consensus 325 lg~~----~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~----------------------------~~~~~g~~~~ 372 (387)
T PRK07850 325 HEPD----MDKVNVNGGAIALGHPVGSTGARLITTALHELER----------------------------TDKSTALITM 372 (387)
T ss_pred cCCC----CCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHh----------------------------cCCCeEEEEE
Confidence 2211 126666666 67999999999999999999985 1246789998
Q ss_pred ccccceeeeeEeeec
Q 040515 236 FGFGGTNASLLFTKC 250 (251)
Q Consensus 236 ~g~gG~~~~~vl~~~ 250 (251)
++.||...++|||++
T Consensus 373 c~~gg~g~a~~~e~~ 387 (387)
T PRK07850 373 CAGGALSTGTIIERI 387 (387)
T ss_pred ccccCceeEEEEEeC
Confidence 999999999999974
No 52
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.86 E-value=8.5e-21 Score=165.20 Aligned_cols=129 Identities=19% Similarity=0.214 Sum_probs=96.7
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++.+.+++++|.|++..... +.....+...+++++|+++||+|+|||++|+| |.+++..+
T Consensus 265 s~~~a~~~~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~Did~~ei~----------d~fa~~~l 329 (397)
T PRK06954 265 RASTAKRLGLAPLARVVGHSTFAQA-----PSKFTTAPVGAIRKLFEKNGWRAAEVDLFEIN----------EAFAVVTM 329 (397)
T ss_pred cHHHHHHCCCCceEEEEEEEecccC-----cccccchHHHHHHHHHHHcCCCHHHCCEEehh----------hHHHHHHH
Confidence 6677888888888899987764321 11122356789999999999999999999999 66655544
Q ss_pred hhccC---CCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEe
Q 040515 158 FSDHA---TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSN 234 (251)
Q Consensus 158 ~~~~~---~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 234 (251)
+.-.. ...++.++.-+..+|||.||||+.+++++++||+.. ..++.+++
T Consensus 330 ~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~----------------------------~g~~~v~~ 381 (397)
T PRK06954 330 AAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRAR----------------------------GGKRGVAS 381 (397)
T ss_pred HHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhc----------------------------CCCeEEEE
Confidence 32110 112355555556789999999999999999999862 13567888
Q ss_pred cccccceeeeeEeee
Q 040515 235 SFGFGGTNASLLFTK 249 (251)
Q Consensus 235 ~~g~gG~~~~~vl~~ 249 (251)
.+..||...++|||+
T Consensus 382 ~c~~gg~g~a~~~e~ 396 (397)
T PRK06954 382 LCIGGGEATAMGIEL 396 (397)
T ss_pred EccccchhhEEEEEe
Confidence 889999999999986
No 53
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.86 E-value=6.5e-21 Score=167.56 Aligned_cols=133 Identities=22% Similarity=0.288 Sum_probs=100.5
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++++.+|++++.++.... ..+.....+...+++++|+++||+|+|||+||+| |.+++..+
T Consensus 301 see~A~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~----------daFa~~~l 365 (452)
T PLN02287 301 KRSVAMQKGLPILGVFRSFAAVG-----VDPAVMGIGPAVAIPAAVKAAGLELDDIDLFEIN----------EAFASQFV 365 (452)
T ss_pred eHHHHHHCCCCeEEEEEEEeecc-----CCCccchHHHHHHHHHHHHHcCCCHHHCCEEEec----------chHHHHHH
Confidence 66778888888999998877442 1233344567899999999999999999999999 77777776
Q ss_pred hhccCC---CCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEe
Q 040515 158 FSDHAT---SGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSN 234 (251)
Q Consensus 158 ~~~~~~---~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 234 (251)
+.-... ..|+.+...+-.+|||+||||+.+++.+++||++.- ...++++++
T Consensus 366 ~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~~~--------------------------~~~~~gl~~ 419 (452)
T PLN02287 366 YCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRG--------------------------KDCRFGVVS 419 (452)
T ss_pred HHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHhcC--------------------------CCCCeeEEE
Confidence 532111 112334444447899999999999999999997511 112689999
Q ss_pred cccccceeeeeEeeecC
Q 040515 235 SFGFGGTNASLLFTKCQ 251 (251)
Q Consensus 235 ~~g~gG~~~~~vl~~~~ 251 (251)
.+..||...++|||+.|
T Consensus 420 ~c~ggG~g~a~~ie~~~ 436 (452)
T PLN02287 420 MCIGTGMGAAAVFERGD 436 (452)
T ss_pred EccccCceeEEEEEecC
Confidence 99999999999999865
No 54
>PRK05790 putative acyltransferase; Provisional
Probab=99.86 E-value=6.7e-21 Score=166.14 Aligned_cols=133 Identities=20% Similarity=0.288 Sum_probs=98.5
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++.+.+++++|+|++..... +.....+...+++++|+++|++|+|||++|+|+..+.. +...++.
T Consensus 261 s~e~a~~~~~~~~~~I~g~~~~~~~-----~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f~~~----~l~~~e~- 330 (393)
T PRK05790 261 SEAKAKELGLTPLARIVSYAVAGVD-----PAIMGIGPVPAIRKALEKAGWSLADLDLIEINEAFAAQ----ALAVEKE- 330 (393)
T ss_pred cHHHHHHCCCCeeEEEEEEEEccCC-----CCccchhHHHHHHHHHHHcCCCHHHCCEEEeCcHHHHH----HHHHHHH-
Confidence 6677888888898999999987532 22223456789999999999999999999999433221 2222222
Q ss_pred hhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccc
Q 040515 158 FSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFG 237 (251)
Q Consensus 158 ~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~g 237 (251)
|+-. ..|+.++.-+..+||+.||+|+.+++++++||+.. +.|+++++.++
T Consensus 331 lg~~--~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~----------------------------~~~~gl~~~~~ 380 (393)
T PRK05790 331 LGLD--PEKVNVNGGAIALGHPIGASGARILVTLLHEMKRR----------------------------GAKKGLATLCI 380 (393)
T ss_pred hCCC--hhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhc----------------------------CCCeEEEEEec
Confidence 2211 11344444555789999999999999999999862 34789999999
Q ss_pred ccceeeeeEeeec
Q 040515 238 FGGTNASLLFTKC 250 (251)
Q Consensus 238 ~gG~~~~~vl~~~ 250 (251)
.+|...++|||++
T Consensus 381 ~~g~g~~~~~e~~ 393 (393)
T PRK05790 381 GGGQGVALIVERP 393 (393)
T ss_pred cCCceeEEEEEcC
Confidence 9999999999975
No 55
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=99.86 E-value=2.2e-20 Score=163.85 Aligned_cols=222 Identities=18% Similarity=0.224 Sum_probs=144.8
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhH-----------------------H-HHh-hhhhcc
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM-----------------------A-GFC-KSRALT 56 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~-----------------------~-~~~-~~~~l~ 56 (251)
|+++|+++|+||+.||..|+++|++|++|++||+|+|+++..... . .|. .+..+.
T Consensus 112 p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ym~ 191 (438)
T PTZ00455 112 PAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQRKLDDFTFPCLFAKRMKYIQ 191 (438)
T ss_pred ceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccccccccCcchHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999986542100 0 010 011111
Q ss_pred cccC------------------CCCCCc--cccc--cc----------------------------CCCcc------chh
Q 040515 57 TKYN------------------GTPQEA--SRPF--DC----------------------------GRDGF------ELE 80 (251)
Q Consensus 57 ~~~~------------------~~~~~~--~~~f--~~----------------------------~~~g~------~~~ 80 (251)
+.++ ..|... .++. +. ..||- +++
T Consensus 192 ~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~~~~~d~~~~~~e~l~s~~i~~pl~~~d~s~~sDGAaA~vl~See 271 (438)
T PTZ00455 192 EHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQVSDGGAGLVLASEE 271 (438)
T ss_pred HHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCceeeccccccchhhhcCCcccCcCchhcCCCccccceEEEEecHH
Confidence 1110 011100 0011 00 01111 566
Q ss_pred hhhhcCCeE----EEEEeeeeecCCCCCCCCC--CCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHH
Q 040515 81 HAKKRGAKI----YAEVRGYGMSGDAHHITQP--HIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAI 154 (251)
Q Consensus 81 ~A~~~g~~~----~a~i~g~~~~~~~~~~~~~--~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~ 154 (251)
.|++.+.++ .++|++++...+......+ ..... ...+++++|+++|++++|||++|+|...+.. |...+
T Consensus 272 ~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~-~~~A~~~a~~~AGl~~~DiD~~Ei~daFa~~----~l~~~ 346 (438)
T PTZ00455 272 GLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFT-SRAAAQKALSMAGVKPSDLQVAEVHDCFTIA----ELLMY 346 (438)
T ss_pred HHHhcCCCCCCCccEEEEEEEEecCCcccCccccccchH-HHHHHHHHHHHcCCCHHHCcEeeecccChHH----HHHHH
Confidence 677777665 6899999887653211111 11222 3689999999999999999999999776665 55555
Q ss_pred HHH-hhc------------cCCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCc
Q 040515 155 RTV-FSD------------HATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMP 219 (251)
Q Consensus 155 ~~~-~~~------------~~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~ 219 (251)
+.+ |.. ...+++.||+...+ .+|||.+|+|+.+++++++||+...
T Consensus 347 e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLrg~a-------------------- 406 (438)
T PTZ00455 347 EALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGHPVGATGVKQIMEVYRQMKGQC-------------------- 406 (438)
T ss_pred HHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCCCcchHHHHHHHHHHHHHhhcc--------------------
Confidence 554 111 12235589998888 4599999999999999999998743
Q ss_pred cccCCCCC-CcEEEEeccc-ccceeeeeEeee
Q 040515 220 LTASKDMP-ISAALSNSFG-FGGTNASLLFTK 249 (251)
Q Consensus 220 ~~~~~~~~-~~~~lv~~~g-~gG~~~~~vl~~ 249 (251)
...|..+ .+.+++++.| ++..+...||+.
T Consensus 407 -g~~Qv~~~~~~gl~~~~Gg~~~~~~~~vl~~ 437 (438)
T PTZ00455 407 -GEYQMKNIPALGATLNMGGDDKTAVSTVLQN 437 (438)
T ss_pred -ccCCCCCcccEEEEeccCCCcceEEEEEEec
Confidence 2223344 5788988877 555666666653
No 56
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.86 E-value=8.4e-21 Score=165.26 Aligned_cols=130 Identities=26% Similarity=0.348 Sum_probs=102.9
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+.+.|++++.+++++|+|++...+. +.....+...+++++|+++|++|+|||++|+|...+.. |...++.+
T Consensus 262 s~~~A~~~~~~~~a~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~Agl~~~dId~~e~~d~f~~~----~l~~~e~l 332 (394)
T PRK06445 262 SKKAVKKYGLKPMAKIRSFGFAGVP-----PAIMGKGPVPASKKALEKAGLSVKDIDLWEINEAFAVV----VLYAIKEL 332 (394)
T ss_pred cHHHHHHCCCCceEEEEEEEEeccC-----CchhcchHHHHHHHHHHHcCCCHHHcCEEEecccchHH----HHHHHHHh
Confidence 6677888888999999999987642 22234467889999999999999999999999766554 66666555
Q ss_pred hhccCCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEec
Q 040515 158 FSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNS 235 (251)
Q Consensus 158 ~~~~~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~ 235 (251)
.-.. -||+...+ .+|||.||+|+.+++++++||+. .+.++++++.
T Consensus 333 g~~~-----~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~----------------------------~~~~~gl~~~ 379 (394)
T PRK06445 333 GLDP-----ETVNIKGGAIAIGHPLGATGARIVGTLARQLQI----------------------------KGKDYGVATL 379 (394)
T ss_pred CCCc-----cccCCCCCHHHcCCCccchHHHHHHHHHHHHHh----------------------------cCCCEEEEEE
Confidence 2111 25666666 56999999999999999999972 2346899999
Q ss_pred ccccceeeeeEeee
Q 040515 236 FGFGGTNASLLFTK 249 (251)
Q Consensus 236 ~g~gG~~~~~vl~~ 249 (251)
++.||+..++|||+
T Consensus 380 ~~~gg~g~a~~~e~ 393 (394)
T PRK06445 380 CVGGGQGGAVVLER 393 (394)
T ss_pred cccCChhhEEEEEc
Confidence 99999999999986
No 57
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.85 E-value=6.1e-21 Score=167.53 Aligned_cols=136 Identities=18% Similarity=0.228 Sum_probs=100.9
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+.+.|++.+.++.++|.+++...... . .........+++++|+++|++++|||++|+|...+.. |...++.+
T Consensus 278 see~A~~l~~~p~~~i~g~~~~~~~~---~-~~~~~~~~~a~~~al~~AGl~~~DiD~~Ei~d~Fa~~----~l~~~e~l 349 (428)
T PRK08963 278 SESRAKALGLTPLGYLRSYAFAAIDV---W-QDMLLGPAYATPLALERAGLTLADLTLIDMHEAFAAQ----TLANLQMF 349 (428)
T ss_pred cHHHHHHcCCCccEEEEEEecccCCc---h-hhhhhHHHHHHHHHHHHcCCCHHHCCEEEEccccHHH----HHHHHHHh
Confidence 56677788888888999988764211 0 0113345678999999999999999999999776644 44444444
Q ss_pred h---------hccCCCCce---eeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccC
Q 040515 158 F---------SDHATSGSL---AFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTAS 223 (251)
Q Consensus 158 ~---------~~~~~~~~~---~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~ 223 (251)
- +.....+.+ ||+...+ .+|||.+|+|+.+++++++||+.+
T Consensus 350 ~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gasG~~~~~e~~~qLrg~------------------------- 404 (428)
T PRK08963 350 ASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHELRRR------------------------- 404 (428)
T ss_pred cCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHHHHHhhc-------------------------
Confidence 1 212222335 8888888 459999999999999999999862
Q ss_pred CCCCCcEEEEecccccceeeeeEeee
Q 040515 224 KDMPISAALSNSFGFGGTNASLLFTK 249 (251)
Q Consensus 224 ~~~~~~~~lv~~~g~gG~~~~~vl~~ 249 (251)
..+++|++.++.||...++|||+
T Consensus 405 ---~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 405 ---GGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred ---CCCEEEEEEccccChhhEEEEEe
Confidence 23579999999999999999986
No 58
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.85 E-value=1.2e-20 Score=163.96 Aligned_cols=131 Identities=22% Similarity=0.294 Sum_probs=96.8
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++++.+++++|+|++.... .+.+......++++++|++||++|+|||++|+|.+.+.. |...+ +.
T Consensus 256 s~~~A~~~~~~~~~~i~g~g~~~~-----~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~fa~~----~~~~~-e~ 325 (386)
T TIGR01930 256 SEERAKELGLTPLARIVSFAVAGV-----DPEIMGLGPVPAIPKALKKAGLSISDIDLFEINEAFAAQ----VLACI-KE 325 (386)
T ss_pred cHHHHHHCCCCccEEEEEEEEecC-----CCccccccHHHHHHHHHHHcCCCHHHCCeeehcchhHHH----HHHHH-HH
Confidence 667888899999999999988753 122233455789999999999999999999999444321 22222 22
Q ss_pred hhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccc
Q 040515 158 FSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFG 237 (251)
Q Consensus 158 ~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~g 237 (251)
|+-. ..|+.+...+..+|||.+|+|+.+++++++||+.+ +.++++++.++
T Consensus 326 lG~~--~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~----------------------------~~~~gl~~~~~ 375 (386)
T TIGR01930 326 LGLD--LEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR----------------------------GGRYGLATICI 375 (386)
T ss_pred hCCC--hhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc----------------------------CCCEEEEEEec
Confidence 2211 11233444444889999999999999999999862 35789999999
Q ss_pred ccceeeeeEee
Q 040515 238 FGGTNASLLFT 248 (251)
Q Consensus 238 ~gG~~~~~vl~ 248 (251)
.||...++|||
T Consensus 376 ~gG~g~~~~~e 386 (386)
T TIGR01930 376 GGGQGIAVILE 386 (386)
T ss_pred cCCceEEEEeC
Confidence 99999999986
No 59
>PRK06158 thiolase; Provisional
Probab=99.85 E-value=6.3e-20 Score=159.30 Aligned_cols=145 Identities=19% Similarity=0.178 Sum_probs=105.3
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCC-CCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHIT-QPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRT 156 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~-~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~ 156 (251)
+++.|++.+.++ ++|+|++..++..... .++........+++++|++|||+|+|||++|+|++.+.. |...++.
T Consensus 219 s~e~A~~l~~~~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~~----~l~~~E~ 293 (384)
T PRK06158 219 RADRARDLPRPP-VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTIN----TILFLED 293 (384)
T ss_pred cHHHHhhcCCCc-EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCCchHH----HHHHHHH
Confidence 566777666554 6788888776654322 222234456789999999999999999999999998876 7777766
Q ss_pred H-hhcc------------CCCCceeeecccCC--ccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccc
Q 040515 157 V-FSDH------------ATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLT 221 (251)
Q Consensus 157 ~-~~~~------------~~~~~~~v~~~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~ 221 (251)
+ |+.+ ..++++||+...+. .||| +++|+.+++++++||+... .
T Consensus 294 lG~~~~Ge~~~~~~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~a---------------------g 351 (384)
T PRK06158 294 LGFCAKGEGGAFVEGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEA---------------------G 351 (384)
T ss_pred cCCCCCCcHHHHHHCCCCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCC---------------------C
Confidence 5 2221 33466899999885 5999 9999999999999999754 2
Q ss_pred cCCCCCCcEEEEecccc-cceeeeeEeee
Q 040515 222 ASKDMPISAALSNSFGF-GGTNASLLFTK 249 (251)
Q Consensus 222 ~~~~~~~~~~lv~~~g~-gG~~~~~vl~~ 249 (251)
..|..+.+.+++++.|. +..+..+||++
T Consensus 352 ~rQv~~a~~gl~~~~Gg~~~~~~~~vl~~ 380 (384)
T PRK06158 352 ERQVAGAEVALAHGNGGVLSSQATAILGT 380 (384)
T ss_pred CCcCCCCCEEEEECCCCcccceEEEEEec
Confidence 33445678999998874 34455556654
No 60
>PRK06059 lipid-transfer protein; Provisional
Probab=99.85 E-value=3.4e-20 Score=161.93 Aligned_cols=223 Identities=15% Similarity=0.208 Sum_probs=145.5
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChh--h----------HH-----HHh---hhhhc----cc
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL--S----------MA-----GFC---KSRAL----TT 57 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~--~----------~~-----~~~---~~~~l----~~ 57 (251)
|.++++++|+|++.||..|+++|++|++|.+||+|+|.+.... . +. .+. .++.+ .+
T Consensus 77 ~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~ 156 (399)
T PRK06059 77 PVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRMD 156 (399)
T ss_pred ceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999865310 0 00 000 00000 00
Q ss_pred ccCC------------------CCCCc------------------------ccccccCCCcc---chhhhhhc--CCeEE
Q 040515 58 KYNG------------------TPQEA------------------------SRPFDCGRDGF---ELEHAKKR--GAKIY 90 (251)
Q Consensus 58 ~~~~------------------~~~~~------------------------~~~f~~~~~g~---~~~~A~~~--g~~~~ 90 (251)
+++. .|+.. |-|..+++-.+ +.+.|++. +.++.
T Consensus 157 ~yg~s~e~~a~v~~~~~~~a~~Np~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~ 236 (399)
T PRK06059 157 LYGATVEDFAQVKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGSVAGV 236 (399)
T ss_pred HhCCCHHHHHHHHHHHHHHHccCcHhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccccCCc
Confidence 0000 00000 00000000001 55566666 44556
Q ss_pred EEEeeeeecCCCCC--------CC------CCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHH
Q 040515 91 AEVRGYGMSGDAHH--------IT------QPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRT 156 (251)
Q Consensus 91 a~i~g~~~~~~~~~--------~~------~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~ 156 (251)
++|++++...+... .. .+.+.......+++++|+++|++++|||++|+|...+.. |...++.
T Consensus 237 v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~d~f~~~----~l~~~e~ 312 (399)
T PRK06059 237 PSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTAL----ELDWYEH 312 (399)
T ss_pred eEEEEEEEecccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeecccChHH----HHHHHHH
Confidence 88999887543221 00 011111223578999999999999999999999887765 6655554
Q ss_pred H-hh------------ccCCCCceeeecccCC--ccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccc
Q 040515 157 V-FS------------DHATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLT 221 (251)
Q Consensus 157 ~-~~------------~~~~~~~~~v~~~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~ 221 (251)
+ |. ....++++||+...+. +|||.+++|+.+++++++||+... .
T Consensus 313 lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLrg~a---------------------g 371 (399)
T PRK06059 313 LGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQA---------------------G 371 (399)
T ss_pred cCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHHHHHHhccCc---------------------C
Confidence 4 11 1223456899999884 599999999999999999999743 2
Q ss_pred cCCCCCCcEEEEecccccceeeeeEeee
Q 040515 222 ASKDMPISAALSNSFGFGGTNASLLFTK 249 (251)
Q Consensus 222 ~~~~~~~~~~lv~~~g~gG~~~~~vl~~ 249 (251)
..|..+.+++++++.|.+|..+++||++
T Consensus 372 ~~Qv~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 372 GRQVEGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred CccCCCccEEEEeccCCcccceEEEecC
Confidence 3344567889999888889999999985
No 61
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.85 E-value=2.4e-20 Score=163.01 Aligned_cols=222 Identities=19% Similarity=0.203 Sum_probs=143.6
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHH---HH------h------------hhhhcc----
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA---GF------C------------KSRALT---- 56 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~---~~------~------------~~~~l~---- 56 (251)
|+++|+++|+|++.||..|+.+|++|++|.+||+|+|++...+... .+ . ..+...
T Consensus 82 ~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~y~ 161 (403)
T PRK06289 82 PASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADEYD 161 (403)
T ss_pred ceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHHHH
Confidence 5788999999999999999999999999999999999865421100 00 0 000000
Q ss_pred cccC------------------CCCCCccc------c-----------c-------c--cCCCcc------chhhhhhcC
Q 040515 57 TKYN------------------GTPQEASR------P-----------F-------D--CGRDGF------ELEHAKKRG 86 (251)
Q Consensus 57 ~~~~------------------~~~~~~~~------~-----------f-------~--~~~~g~------~~~~A~~~g 86 (251)
+.++ ..|.-..+ | + + ...||- +++.|++.+
T Consensus 162 ~~yG~t~e~la~va~~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~ 241 (403)
T PRK06289 162 RRYGLDEEHLRAIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYA 241 (403)
T ss_pred HHhCCCHHHHHHHHHHHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHHHhc
Confidence 0000 00000000 0 0 0 001111 556676665
Q ss_pred C-eEEEEEeeeeecCCCCCCCC------CCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH-
Q 040515 87 A-KIYAEVRGYGMSGDAHHITQ------PHI-DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV- 157 (251)
Q Consensus 87 ~-~~~a~i~g~~~~~~~~~~~~------~~~-~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~- 157 (251)
. ++.++|+|++..++...... .++ .......+.+++|++|||+++|||++|+|+..+.. |...++.+
T Consensus 242 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~D~fa~~----~l~~le~lG 317 (403)
T PRK06289 242 DARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVHDCFTPS----EYLAIDHIG 317 (403)
T ss_pred cCCCCEEEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeeeccchHH----HHHHHHHcC
Confidence 4 56689999988755432111 111 22345679999999999999999999999888776 66666665
Q ss_pred hhc------------cCCCCceeeecccCC--ccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccC
Q 040515 158 FSD------------HATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTAS 223 (251)
Q Consensus 158 ~~~------------~~~~~~~~v~~~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~ 223 (251)
|+. ...++.+||+...+. .|||.+|+|+.+++++++||+... ...
T Consensus 318 l~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a---------------------g~~ 376 (403)
T PRK06289 318 LTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTGTA---------------------GDY 376 (403)
T ss_pred CCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHHhccc---------------------cCc
Confidence 221 123467899999995 599999999999999999999743 223
Q ss_pred CCCCCcEEEEeccc-ccceeeeeEee
Q 040515 224 KDMPISAALSNSFG-FGGTNASLLFT 248 (251)
Q Consensus 224 ~~~~~~~~lv~~~g-~gG~~~~~vl~ 248 (251)
|....+.+++++.| .++.+..+||+
T Consensus 377 Qv~~~~~~l~~~~gg~~~~~~~~i~~ 402 (403)
T PRK06289 377 QVEGAKTFGTLNIGGSTTTTVSFVVG 402 (403)
T ss_pred cCCchheEEEEecCcccceEEEEEEe
Confidence 33455678888777 44555555553
No 62
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=99.85 E-value=3e-20 Score=161.94 Aligned_cols=212 Identities=19% Similarity=0.200 Sum_probs=138.3
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhH---H-----HHh----------hhhh----ccccc
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM---A-----GFC----------KSRA----LTTKY 59 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~---~-----~~~----------~~~~----l~~~~ 59 (251)
|+++|+.+|+|++.||++|+.+|++|++|++||+|+|++...... . .+. .... +.+.+
T Consensus 80 ~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~y 159 (398)
T PRK06157 80 PVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYAAKY 159 (398)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHHHHh
Confidence 678899999999999999999999999999999999986431100 0 000 0000 00000
Q ss_pred CCC----------------------CCC------------ccc----ccc-----cCCCcc------chhhhhhcCCeEE
Q 040515 60 NGT----------------------PQE------------ASR----PFD-----CGRDGF------ELEHAKKRGAKIY 90 (251)
Q Consensus 60 ~~~----------------------~~~------------~~~----~f~-----~~~~g~------~~~~A~~~g~~~~ 90 (251)
+.+ |+. ..+ |+. ...+|- +.+.|++.+.++.
T Consensus 160 G~t~e~~~~~~a~vav~~~~~A~~np~A~~r~~~t~e~v~~s~~v~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~ 239 (398)
T PRK06157 160 GVSREDLKRAMAHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPLGLFDCCGVSDGAAAAIVTTPEIARALGKKDP 239 (398)
T ss_pred CCCHHHHcccccHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCchhccCCCCCccEEEEEecHHHHHhhCCCCC
Confidence 000 000 000 000 001111 5566777665456
Q ss_pred EEEeeeeecCCCCCC---CCCCC-ChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCcCCcHHHHHHHHHH-hhcc--
Q 040515 91 AEVRGYGMSGDAHHI---TQPHI-DGKGAILAMTRALKQSGLQ--SHQVDYVNAHATSTPLGDTVEATAIRTV-FSDH-- 161 (251)
Q Consensus 91 a~i~g~~~~~~~~~~---~~~~~-~~~~~~~a~~~al~~Agi~--~~dId~i~~h~~gt~~~D~~E~~a~~~~-~~~~-- 161 (251)
++|+|++...+.... ...++ .......+.+++|++|||+ ++|||++|+|++.+.. |...++.+ |..+
T Consensus 240 v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~Fs~~----~l~~~e~lGl~~~Ge 315 (398)
T PRK06157 240 VYVKALQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVHDCFSIT----ELVTMEDLGLSERGQ 315 (398)
T ss_pred eEEEEEEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEecCChHH----HHHHHHHcCCCCCCc
Confidence 899999876543211 01111 1223567899999999998 7999999999888776 66666655 2221
Q ss_pred ----------CCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCc
Q 040515 162 ----------ATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPIS 229 (251)
Q Consensus 162 ----------~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (251)
..++++|++...+ .+|||.+|+|+.+++++++||+... ..+|..+.+
T Consensus 316 ~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a---------------------g~rQv~~a~ 374 (398)
T PRK06157 316 AWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGRA---------------------GERQLKNPR 374 (398)
T ss_pred hHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhcccc---------------------cCccCCCcc
Confidence 2245689999998 4599999999999999999999854 234455678
Q ss_pred EEEEecccc
Q 040515 230 AALSNSFGF 238 (251)
Q Consensus 230 ~~lv~~~g~ 238 (251)
.+++++.|.
T Consensus 375 ~~l~~~~gg 383 (398)
T PRK06157 375 LALTHNLGG 383 (398)
T ss_pred EEEEeccCC
Confidence 999998873
No 63
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.84 E-value=1.8e-20 Score=162.43 Aligned_cols=131 Identities=20% Similarity=0.259 Sum_probs=95.1
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+.+.|++.+.++..+|.++...... +.........+++++|+++|++|+|||++|+|...+.. |...++.+
T Consensus 258 s~~~A~~l~~~p~~~i~~~~~~~~~-----~~~~~~~~~~a~~~a~~~agl~~~Did~~Ei~d~Fa~~----~l~~~e~l 328 (390)
T PRK06504 258 NERGLKALGVKPLARIHHMTVIGGD-----PVIMLEAPLPATERALKKAGMKIDDIDLYEVNEAFASV----PLAWLKAT 328 (390)
T ss_pred cHHHHHHcCCCceEEEEEEEEeecC-----chhhhccHHHHHHHHHHHcCCCHHHCCEEEecccchHH----HHHHHHHh
Confidence 5566777776776778877655431 11123355679999999999999999999999665554 44444443
Q ss_pred hhccCCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEec
Q 040515 158 FSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNS 235 (251)
Q Consensus 158 ~~~~~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~ 235 (251)
+- . +.||+...+ .+|||.+|+|+.++..++.+|++. +.++++.++
T Consensus 329 -G~-~---~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~~----------------------------~~~~gl~~~ 375 (390)
T PRK06504 329 -GA-D---PERLNVNGGAIALGHPLGASGTKLMTTLVHALKQR----------------------------GKRYGLQTM 375 (390)
T ss_pred -CC-C---CCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHhh----------------------------CCCeEEEEE
Confidence 11 0 125666666 579999999999999999999851 246788888
Q ss_pred ccccceeeeeEeeec
Q 040515 236 FGFGGTNASLLFTKC 250 (251)
Q Consensus 236 ~g~gG~~~~~vl~~~ 250 (251)
++.||...++||+++
T Consensus 376 ~~ggg~g~a~ile~~ 390 (390)
T PRK06504 376 CEGGGMANVTIVERL 390 (390)
T ss_pred eecccceeEEEEEeC
Confidence 888899999999863
No 64
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.84 E-value=4.5e-20 Score=161.12 Aligned_cols=134 Identities=16% Similarity=0.265 Sum_probs=98.5
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++.+.+++++|.|++...+.. .....+...+++++|++|||+|+|||++|+|...+.. |...++.+
T Consensus 268 se~~A~~~~~~p~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agl~~~Did~~ei~d~f~~~----~l~~~e~l 338 (404)
T PRK06205 268 TEDKAEELGLRPLARLVSWAVAGVEP-----SRMGIGPVPATEKALARAGLTLDDIDLIELNEAFAAQ----VLAVLKEW 338 (404)
T ss_pred cHHHHHHCCCCceEEEEEEEEeccCC-----ccccccHHHHHHHHHHHcCCCHHHCCEeeeccHHHHH----HHHHHHHh
Confidence 66778888888999999999876432 1122366889999999999999999999999333322 22222222
Q ss_pred -hhccCCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEe
Q 040515 158 -FSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSN 234 (251)
Q Consensus 158 -~~~~~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 234 (251)
|.... ..+++...+ .+|||.||+|+.+++++++||+.. ..++++++
T Consensus 339 g~~~~~---~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~----------------------------~~~~gl~~ 387 (404)
T PRK06205 339 GFGADD---EERLNVNGSGISLGHPVGATGGRILATLLRELQRR----------------------------QARYGLET 387 (404)
T ss_pred CcCccc---CCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhc----------------------------CCCeEEEE
Confidence 11110 013444444 679999999999999999999861 35789999
Q ss_pred cccccceeeeeEeeecC
Q 040515 235 SFGFGGTNASLLFTKCQ 251 (251)
Q Consensus 235 ~~g~gG~~~~~vl~~~~ 251 (251)
.+..||...++|||+.+
T Consensus 388 ~c~~gg~g~a~~~e~~~ 404 (404)
T PRK06205 388 MCIGGGQGLAAVFERVN 404 (404)
T ss_pred EeccCChhhEEEEEecC
Confidence 99999999999999864
No 65
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=99.84 E-value=1.5e-20 Score=163.38 Aligned_cols=130 Identities=19% Similarity=0.234 Sum_probs=99.4
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++.+.++.++|+|++...... .........+++++|+++||+|+|||++|+| |+++...+
T Consensus 255 See~A~~l~~~pv~~I~g~~~~~~~~-----~~~~~~~~~A~~~al~~Agl~~~DiDv~Ei~----------daFa~~~l 319 (388)
T PRK06366 255 SEKAINEYGLKPIARITGYESASLDP-----LDFVEAPIPATRKLLEKQNKSIDYYDLVEHN----------EAFSIASI 319 (388)
T ss_pred cHHHHHHcCCCcCEEEEEEEEEecCH-----HHhcccHHHHHHHHHHHcCCCHHHcceeecc----------chhHHHHH
Confidence 66778877878888999998875421 1112234689999999999999999999999 55555554
Q ss_pred hhc--cCCCCceeeecccCC--ccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEE
Q 040515 158 FSD--HATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALS 233 (251)
Q Consensus 158 ~~~--~~~~~~~~v~~~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 233 (251)
..- ...++. ||+...+. +|||+||||+.+++++++||+. .+.+++++
T Consensus 320 ~~le~lgl~g~-~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~----------------------------~~~~~g~~ 370 (388)
T PRK06366 320 IVRDQLKIDNE-RFNVNGGAVAIGHPIGNSGSRIIVTLINALKT----------------------------RHMKTGLA 370 (388)
T ss_pred HHHHHhCCCCC-ccCCCCchhhhCCCcCCCHHHHHHHHHHHHHh----------------------------cCCCeEEE
Confidence 321 112234 78878774 5999999999999999999985 12467899
Q ss_pred ecccccceeeeeEeeecC
Q 040515 234 NSFGFGGTNASLLFTKCQ 251 (251)
Q Consensus 234 ~~~g~gG~~~~~vl~~~~ 251 (251)
+.+..||...++|||+.+
T Consensus 371 ~~c~~gg~g~a~~~e~~~ 388 (388)
T PRK06366 371 TLCHGGGGAHTLTLEMVE 388 (388)
T ss_pred EEecccChhhEEEEEecC
Confidence 999999999999999864
No 66
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.84 E-value=2.5e-20 Score=161.92 Aligned_cols=218 Identities=24% Similarity=0.294 Sum_probs=147.8
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHH---------------H------hhhhhcc----
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAG---------------F------CKSRALT---- 56 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~---------------~------~~~~~l~---- 56 (251)
|.++++.+|+|++.+|..|+++|++|++|++||+|+|.+........ + ..++...
T Consensus 69 ~~~~v~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~ 148 (375)
T cd00829 69 PATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYM 148 (375)
T ss_pred ceeeEeCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999997664321000 0 0000000
Q ss_pred cccCCC------------------CCC------------------------cccccccCCCcc---chhhhhhcCCeEEE
Q 040515 57 TKYNGT------------------PQE------------------------ASRPFDCGRDGF---ELEHAKKRGAKIYA 91 (251)
Q Consensus 57 ~~~~~~------------------~~~------------------------~~~~f~~~~~g~---~~~~A~~~g~~~~a 91 (251)
+.++.+ |.. .|-++.+.+..+ +++.|++. .++++
T Consensus 149 ~~~g~t~e~~~~va~~~~~~A~~np~A~~~~~~t~d~~~~~~~i~~pl~~~~~~~~~DGaaa~vl~s~~~a~~~-~~~~~ 227 (375)
T cd00829 149 HRYGTTREDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERAREL-TDRPV 227 (375)
T ss_pred HHhCCCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceeEEEEecHHHHhhc-CCCCe
Confidence 000000 000 000111111111 56667766 56789
Q ss_pred EEeeeeecCCCCCCCCCCC--ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH-hhcc-------
Q 040515 92 EVRGYGMSGDAHHITQPHI--DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV-FSDH------- 161 (251)
Q Consensus 92 ~i~g~~~~~~~~~~~~~~~--~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~-~~~~------- 161 (251)
+|+|++...+......... ...+...+++++|++||++++|||++|+|++.+.. +...++.+ |...
T Consensus 228 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~~----~l~~~e~lGl~~~g~~~~~~ 303 (375)
T cd00829 228 WILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTIA----ELLALEDLGFCEKGEGGKLV 303 (375)
T ss_pred EEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH----HHHHHHHcCCCCCCchHHHH
Confidence 9999999887765433322 45678899999999999999999999999888876 66666555 2221
Q ss_pred -----CCCCceeeecccCC--ccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEe
Q 040515 162 -----ATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSN 234 (251)
Q Consensus 162 -----~~~~~~~v~~~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 234 (251)
..++.+||+..++. +||+.+++|+.+++++++||+... ...|..+.++++++
T Consensus 304 ~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~a---------------------g~~qv~~~~~~l~~ 362 (375)
T cd00829 304 REGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGEA---------------------GARQVPGARVGLAH 362 (375)
T ss_pred HCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCCc---------------------ccccCCCccEEEEe
Confidence 22355789999885 599999999999999999999754 23344467899998
Q ss_pred cccccceeeee
Q 040515 235 SFGFGGTNASL 245 (251)
Q Consensus 235 ~~g~gG~~~~~ 245 (251)
+.|..+.+..+
T Consensus 363 ~~gg~~~~~~~ 373 (375)
T cd00829 363 NIGGTGSAAVV 373 (375)
T ss_pred cCCCccceEEE
Confidence 88755544433
No 67
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.84 E-value=7.5e-20 Score=158.84 Aligned_cols=223 Identities=17% Similarity=0.176 Sum_probs=148.7
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhh--------------------HHHH------hhhhhc
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS--------------------MAGF------CKSRAL 55 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~--------------------~~~~------~~~~~l 55 (251)
|++.|+++|+|+..++..|+++|++|.+|.+||+|+|.+.+... ++.+ ...|..
T Consensus 78 ~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~G~~ 157 (386)
T PRK08313 78 PLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAP 157 (386)
T ss_pred ceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHHCcC
Confidence 57789999999999999999999999999999999997543200 0000 000000
Q ss_pred cc-----------ccCCCCCC-------------------------cccccccCCCcc---chhhhhhcCCeEEEEEeee
Q 040515 56 TT-----------KYNGTPQE-------------------------ASRPFDCGRDGF---ELEHAKKRGAKIYAEVRGY 96 (251)
Q Consensus 56 ~~-----------~~~~~~~~-------------------------~~~~f~~~~~g~---~~~~A~~~g~~~~a~i~g~ 96 (251)
.+ .....|.- .|-|+.+.+-.+ +.+.|++.+.++.++|+|+
T Consensus 158 ~e~la~vav~~~~~A~~NP~A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~ 237 (386)
T PRK08313 158 EHIGAMVAVKDRLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGT 237 (386)
T ss_pred HHHHHHHHHHHHHHHccCcHHhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEE
Confidence 00 00000100 011111111111 5566766666677899999
Q ss_pred eecCCCCCCC-CCCCChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCcCCcHHHHHHHHHH-hh------------c
Q 040515 97 GMSGDAHHIT-QPHIDGKGAILAMTRALKQSGLQ--SHQVDYVNAHATSTPLGDTVEATAIRTV-FS------------D 160 (251)
Q Consensus 97 ~~~~~~~~~~-~~~~~~~~~~~a~~~al~~Agi~--~~dId~i~~h~~gt~~~D~~E~~a~~~~-~~------------~ 160 (251)
+..++..... .+.........+++++|++||++ ++|||++|+|++.+.. |...++.+ |. .
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~~~----~~~~~e~lGl~~~G~~~~~~~~G~ 313 (386)
T PRK08313 238 AMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFSWF----EPMWLENLGFAPEGEGWKLTEAGE 313 (386)
T ss_pred EEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCChHH----HHHHHHHcCCCCCCchHHHHHCCC
Confidence 9876654321 12223456778999999999998 6999999999888876 66666655 22 1
Q ss_pred cCCCCceeeecccCCc-cchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEecccc-
Q 040515 161 HATSGSLAFSSTKGAI-GHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGF- 238 (251)
Q Consensus 161 ~~~~~~~~v~~~k~~~-Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~g~- 238 (251)
...++++||+...+.+ ||+.+++|+.+++++++||+... ...|..+.+.+++++.|.
T Consensus 314 ~~~~G~~pvN~~GG~l~g~p~gatG~~~~~e~~~qlrG~a---------------------g~rQv~~a~~~l~~~~Gg~ 372 (386)
T PRK08313 314 TAIGGRLPVNPSGGVLSSNPIGASGMIRFAEAALQVMGKA---------------------GEHQVDGARKALGHAYGGG 372 (386)
T ss_pred cCCCCCccccCCCcccccCCCcHHHHHHHHHHHHHhcccc---------------------cCCcCCCccEEEEeccCCc
Confidence 2345678999998866 99999999999999999999854 233445678899998874
Q ss_pred cceeeeeEeee
Q 040515 239 GGTNASLLFTK 249 (251)
Q Consensus 239 gG~~~~~vl~~ 249 (251)
+...+.+||++
T Consensus 373 ~~~~~~~v~~~ 383 (386)
T PRK08313 373 SQFFSMWVVGS 383 (386)
T ss_pred ceEEEEEEEec
Confidence 34555555554
No 68
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.84 E-value=8.4e-20 Score=158.80 Aligned_cols=220 Identities=22% Similarity=0.308 Sum_probs=134.3
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhh----------HH-HHh--------------------
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS----------MA-GFC-------------------- 50 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~----------~~-~~~-------------------- 50 (251)
|+++|+++|+|++.||..|+++|++|++|++||+|+|+++.... +. .+.
T Consensus 77 p~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~~~~~~~~ 156 (393)
T cd00826 77 PAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQAGAEAAE 156 (393)
T ss_pred cEEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999998653210 00 000
Q ss_pred hhhhccc-------cc-------CCCCCCc------------cccccc------------CCCcc------chhhhhhcC
Q 040515 51 KSRALTT-------KY-------NGTPQEA------------SRPFDC------------GRDGF------ELEHAKKRG 86 (251)
Q Consensus 51 ~~~~l~~-------~~-------~~~~~~~------------~~~f~~------------~~~g~------~~~~A~~~g 86 (251)
..+...+ .. ...|.-. .+|... -.+|- +++.|++.+
T Consensus 157 ~~G~~~e~~a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~S~~~a~~l~ 236 (393)
T cd00826 157 KDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEAEAQKHG 236 (393)
T ss_pred HcCCCHHHEEEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEecHHHHHHcC
Confidence 0000000 00 0001000 001000 01111 556666655
Q ss_pred C-eEEEEEeeeeecCCCCC-CCCCC----CChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH-hh
Q 040515 87 A-KIYAEVRGYGMSGDAHH-ITQPH----IDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV-FS 159 (251)
Q Consensus 87 ~-~~~a~i~g~~~~~~~~~-~~~~~----~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~-~~ 159 (251)
. ....+|++.+...+... ...+. ........+++++|++|||+++|||++|+|...+.. |...++.+ |.
T Consensus 237 l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d~Fa~~----~l~~~e~lgl~ 312 (393)
T cd00826 237 LQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAAN----ACATNEALGLC 312 (393)
T ss_pred CcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhhhhHHH----HHHHHHHhCCC
Confidence 2 12245555444333211 11111 223456789999999999999999999999554443 44444443 11
Q ss_pred c------------cCCCCceeeecccCC--ccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCC
Q 040515 160 D------------HATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 225 (251)
Q Consensus 160 ~------------~~~~~~~~v~~~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~ 225 (251)
. ...++.+||+...+. +|||.||+|+.+++++++||+... ...|.
T Consensus 313 ~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g~a---------------------g~~q~ 371 (393)
T cd00826 313 PEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGEA---------------------GKRQG 371 (393)
T ss_pred cccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhhhh---------------------ccccC
Confidence 1 122345899999884 599999999999999999998743 22334
Q ss_pred CCCcEEEEecccccceeeeeEee
Q 040515 226 MPISAALSNSFGFGGTNASLLFT 248 (251)
Q Consensus 226 ~~~~~~lv~~~g~gG~~~~~vl~ 248 (251)
.+.+++++++.| |...++|++
T Consensus 372 ~~~~~~~~~~~G--g~g~a~~~~ 392 (393)
T cd00826 372 AGAGLALLCIGG--GGGAAMCIE 392 (393)
T ss_pred CCcCEEEEEcCC--CceeEEEEe
Confidence 456788887766 456667765
No 69
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.84 E-value=1.6e-19 Score=156.60 Aligned_cols=220 Identities=16% Similarity=0.162 Sum_probs=142.2
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhh----H--------------------HHHhhhhhccc
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS----M--------------------AGFCKSRALTT 57 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~----~--------------------~~~~~~~~l~~ 57 (251)
|++.|+++|+|+..+|..|+++|++|.+|.+||+|+|++..... . +.+...+.+ +
T Consensus 83 ~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym-~ 161 (392)
T PRK06065 83 PVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYM-A 161 (392)
T ss_pred CeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHH-H
Confidence 67889999999999999999999999999999999998532100 0 000000000 0
Q ss_pred ccCCC------------------CCC----------------ccccc---cc--CCCcc------chhhhhhcCCeEEEE
Q 040515 58 KYNGT------------------PQE----------------ASRPF---DC--GRDGF------ELEHAKKRGAKIYAE 92 (251)
Q Consensus 58 ~~~~~------------------~~~----------------~~~~f---~~--~~~g~------~~~~A~~~g~~~~a~ 92 (251)
+++.+ |.- -..|+ |. ..+|- +.+.|++.+.++ .+
T Consensus 162 ~yG~~~e~lA~vav~~~~~A~~NP~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~-v~ 240 (392)
T PRK06065 162 TYGIKKEEIALVSVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDTP-VW 240 (392)
T ss_pred HHCcCHHHHHHHHHHHHHhhccCchhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCCC-EE
Confidence 00000 000 00000 00 01111 556677666555 56
Q ss_pred EeeeeecCCCCCCCC-CCCChHHHHHHHHHHHHHcCCCC--CCccEEEecCCCCcCCcHHHHHHHHHHh-----------
Q 040515 93 VRGYGMSGDAHHITQ-PHIDGKGAILAMTRALKQSGLQS--HQVDYVNAHATSTPLGDTVEATAIRTVF----------- 158 (251)
Q Consensus 93 i~g~~~~~~~~~~~~-~~~~~~~~~~a~~~al~~Agi~~--~dId~i~~h~~gt~~~D~~E~~a~~~~~----------- 158 (251)
|+|++...+...... ..........+.+++|+++|+++ +|||++|+|++.+.. |...++.+-
T Consensus 241 I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~~----~l~~~E~lG~~~~G~~~~~~ 316 (392)
T PRK06065 241 VEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYK----ELHHLEGLQLAKRGEAPKLL 316 (392)
T ss_pred EEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChHH----HHHHHHHcCCCCCCcHHHHH
Confidence 899887665432111 11223445689999999999985 999999999888765 666665541
Q ss_pred --hccCCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCC-cEEEE
Q 040515 159 --SDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPI-SAALS 233 (251)
Q Consensus 159 --~~~~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lv 233 (251)
+....++.+||+...+ .+|||.+|+|+.+++++++||+... ..+|..+. +.+++
T Consensus 317 ~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a---------------------g~rQv~~a~~~~l~ 375 (392)
T PRK06065 317 KEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGTA---------------------GKMQVKKPVHTGVA 375 (392)
T ss_pred HCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhccc---------------------cCCcCCCccceeEE
Confidence 1122345689998888 4599999999999999999999854 23344456 78999
Q ss_pred eccc-ccceeeeeEee
Q 040515 234 NSFG-FGGTNASLLFT 248 (251)
Q Consensus 234 ~~~g-~gG~~~~~vl~ 248 (251)
+++| .+..++.+||+
T Consensus 376 ~~~Gg~~~~~~~~il~ 391 (392)
T PRK06065 376 QAWGDLMQAGTVIVLR 391 (392)
T ss_pred eccccccceeEEEEec
Confidence 9887 44455555554
No 70
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=99.84 E-value=2.4e-20 Score=163.42 Aligned_cols=136 Identities=19% Similarity=0.265 Sum_probs=94.5
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++.+.++.++|++++........ ........+++++|++||++++|||++|+|...+.. |...++.+
T Consensus 280 se~~A~~l~~~p~~~i~~~~~~~~~~~~----~~~~~~~~a~~~al~~Agl~~~Did~~Ei~daFa~~----~l~~~e~l 351 (430)
T TIGR02446 280 REGRAKELGMEPLGYIRSYAFTAIDVWQ----DMLMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQ----TLANVQMF 351 (430)
T ss_pred cHHHHHHcCCCceEEEEEEEeeccCchH----hhcccHHHHHHHHHHHcCCCHHHCCEEEeccccHHH----HHHHHHHh
Confidence 5566777777777899988765321100 012233578999999999999999999999777665 66656555
Q ss_pred ----hhcc-----CCCCce---eeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccC
Q 040515 158 ----FSDH-----ATSGSL---AFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTAS 223 (251)
Q Consensus 158 ----~~~~-----~~~~~~---~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~ 223 (251)
|... ...+.+ ||+...+ .+|||.+|+|+.+++++++||+.+.
T Consensus 352 g~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG~~~v~e~~~qL~g~a------------------------ 407 (430)
T TIGR02446 352 ASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLRELKRRG------------------------ 407 (430)
T ss_pred cCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHHHHHhhcC------------------------
Confidence 2211 112234 7888888 4599999999999999999998632
Q ss_pred CCCCCcEEEEecccccceeeeeEeee
Q 040515 224 KDMPISAALSNSFGFGGTNASLLFTK 249 (251)
Q Consensus 224 ~~~~~~~~lv~~~g~gG~~~~~vl~~ 249 (251)
.++.+...++.||...++|+|+
T Consensus 408 ----g~~g~~~~~~~GG~g~a~iie~ 429 (430)
T TIGR02446 408 ----GGLGLNTACAAGGLGAAMILEV 429 (430)
T ss_pred ----CCccEEEEEecCcceEEEEEEe
Confidence 1123455556667778888875
No 71
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.84 E-value=4e-20 Score=161.35 Aligned_cols=130 Identities=24% Similarity=0.315 Sum_probs=99.4
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++.+.+++++|+|++...+. +.....+...+++++|++||++++|||++|+| |.+++..+
T Consensus 273 s~e~A~~~~~~~~a~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~Agi~~~did~~ei~----------d~f~~~~l 337 (406)
T PRK07851 273 SDTKARELGLTPLARIVSTGVSGLS-----PEIMGLGPVEASKQALARAGMSIDDIDLVEIN----------EAFAAQVL 337 (406)
T ss_pred cHHHHHHcCCCccEEEEEEEEccCC-----CCccchhHHHHHHHHHHHhCCCHHHCCeehhh----------hHHHHHHH
Confidence 6678888898999999999876532 22233457789999999999999999999999 65555544
Q ss_pred hh--ccC-CCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEe
Q 040515 158 FS--DHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSN 234 (251)
Q Consensus 158 ~~--~~~-~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 234 (251)
.. ... ...|+.++..+..+|||.|++|+.+++++++||+. .+.++++++
T Consensus 338 ~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~----------------------------~~~~~g~~~ 389 (406)
T PRK07851 338 PSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQT----------------------------HDKTFGLET 389 (406)
T ss_pred HHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHh----------------------------cCCCeEEEE
Confidence 21 100 01234445555578999999999999999999975 124679999
Q ss_pred cccccceeeeeEeeec
Q 040515 235 SFGFGGTNASLLFTKC 250 (251)
Q Consensus 235 ~~g~gG~~~~~vl~~~ 250 (251)
.++.||...++|||++
T Consensus 390 ~~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 390 MCVGGGQGMAMVLERL 405 (406)
T ss_pred EccccChhhEEEEEec
Confidence 9999999999999986
No 72
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.83 E-value=8.1e-20 Score=159.01 Aligned_cols=134 Identities=20% Similarity=0.303 Sum_probs=95.5
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++++.+++++|+|++...+.. .........+++++|+++|++|+|||++|+|+..+.. |... .+.
T Consensus 261 s~~~A~~~~~~~~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agi~~~Did~~Ei~d~f~~~----~l~~-~e~ 330 (394)
T PLN02644 261 SGEKALELGLQVIAKIRGYADAAQAP-----ELFTTAPALAIPKALKHAGLEASQVDYYEINEAFSVV----ALAN-QKL 330 (394)
T ss_pred cHHHHHHCCCCeEEEEEEEEEcCCCC-----cccchhHHHHHHHHHHHcCCCHHHCCEEEeCcHHHHH----HHHH-HHH
Confidence 66778888889999999999876532 1112234579999999999999999999999333221 1111 122
Q ss_pred hhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccc
Q 040515 158 FSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFG 237 (251)
Q Consensus 158 ~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~g 237 (251)
|+-. ..++.+..-+-.+||+.+|+|+.++++++++|+.+ ..++.+.+.++
T Consensus 331 lg~~--~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~----------------------------~~~~g~~~~~~ 380 (394)
T PLN02644 331 LGLD--PEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSK----------------------------NGKYGVAGICN 380 (394)
T ss_pred hCCC--ccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhc----------------------------CCCeEEEEEec
Confidence 2211 11233333344779999999999999999999862 23578888888
Q ss_pred ccceeeeeEeeecC
Q 040515 238 FGGTNASLLFTKCQ 251 (251)
Q Consensus 238 ~gG~~~~~vl~~~~ 251 (251)
.||...++|||+.|
T Consensus 381 ~gg~g~a~~~e~~~ 394 (394)
T PLN02644 381 GGGGASAIVVELMQ 394 (394)
T ss_pred cCCceeEEEEEecC
Confidence 89999999999864
No 73
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.83 E-value=3.6e-19 Score=152.45 Aligned_cols=207 Identities=26% Similarity=0.372 Sum_probs=142.9
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhH--HH-----Hh--hhhh----cccccC--------
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM--AG-----FC--KSRA----LTTKYN-------- 60 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~--~~-----~~--~~~~----l~~~~~-------- 60 (251)
|+++|+++|+||+.|+..|+++|++|++|++||+|+|++++.+.. .. +. .++. +.++++
T Consensus 74 p~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~ 153 (361)
T PRK06690 74 PGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDE 153 (361)
T ss_pred CceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHH
Confidence 789999999999999999999999999999999999998753210 00 00 0000 000000
Q ss_pred ---------------CC---------------CCC---------cccc-cccC-----------CCcc------chhhhh
Q 040515 61 ---------------GT---------------PQE---------ASRP-FDCG-----------RDGF------ELEHAK 83 (251)
Q Consensus 61 ---------------~~---------------~~~---------~~~~-f~~~-----------~~g~------~~~~A~ 83 (251)
.. ... ..+| |+.. .+|- +.+.|+
T Consensus 154 ~A~~s~k~a~~a~~n~~~~~ei~~v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~ 233 (361)
T PRK06690 154 YACLSYKRTLQALEKGYIHEEILSFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQAR 233 (361)
T ss_pred HHHHHHHHHHHHHHCCCCCCceecccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHH
Confidence 00 000 0011 2210 1221 667788
Q ss_pred hcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCC
Q 040515 84 KRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHAT 163 (251)
Q Consensus 84 ~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~ 163 (251)
+.+.++.++|.+++..... +.....+...+++++|+++|++++|||++|+| |.+++..++.....
T Consensus 234 ~lg~~p~~~i~~~~~~~~~-----~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~----------eafa~~~~~~~e~l 298 (361)
T PRK06690 234 KLGYKPVLRFVRSAVVGVD-----PNLPGTGPIFAVNKLLNEMNMKVEDIDYFEIN----------EAFASKVVACAKEL 298 (361)
T ss_pred HcCCCceEEEEEEEEeccC-----cccchhHHHHHHHHHHHHcCCCHHHcCEeeec----------chhHHHHHHHHHhc
Confidence 8888888889988765421 12224567889999999999999999999999 77777776643222
Q ss_pred C-CceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEecccccc
Q 040515 164 S-GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGG 240 (251)
Q Consensus 164 ~-~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~g~gG 240 (251)
+ .+.+++...+ .+||+.|++|+.+++.++.+|+. .+.++++++.+..||
T Consensus 299 gl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~----------------------------~~~~~g~~~~c~~gG 350 (361)
T PRK06690 299 QIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKR----------------------------EDMKYGIATLGIGGG 350 (361)
T ss_pred CCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHH----------------------------hCCCEEEEEEcccCc
Confidence 1 1124444444 56999999999999999999975 135778888889999
Q ss_pred eeeeeEeeecC
Q 040515 241 TNASLLFTKCQ 251 (251)
Q Consensus 241 ~~~~~vl~~~~ 251 (251)
...++|||+.+
T Consensus 351 ~g~a~~~e~~~ 361 (361)
T PRK06690 351 IGLALLFEKVE 361 (361)
T ss_pred ceeEEEEEecC
Confidence 99999999854
No 74
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.83 E-value=7.2e-20 Score=159.10 Aligned_cols=132 Identities=14% Similarity=0.153 Sum_probs=93.3
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+.+.|++.+.+++++|.|++....... ........+++++|+++||+|+|||++|+|...+.. |...++.
T Consensus 261 s~~~A~~~~~~p~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~did~~e~~d~f~~~----~l~~~e~- 330 (393)
T PRK08235 261 SEDRAKQEGRKPLATILAHTAIAVEAK-----DFPRTPGYAINALLEKTGKTVEDIDLFEINEAFAAV----ALASTEI- 330 (393)
T ss_pred cHHHHHHCCCCceEEEEEEEecccChh-----hhcchHHHHHHHHHHHhCCCHHHCCeehhcchhHHH----HHHHHHH-
Confidence 667788888899999999776543211 112244689999999999999999999999333222 2222222
Q ss_pred hhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEeccc
Q 040515 158 FSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFG 237 (251)
Q Consensus 158 ~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~g 237 (251)
|+-. ..|+.+..-+-.+|||.+|+|+.+++++++||+.+. .++.+.+.+.
T Consensus 331 lg~~--~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~~----------------------------~~~g~~~~c~ 380 (393)
T PRK08235 331 AGID--PEKVNVNGGAVALGHPIGASGARIIVTLIHELKRRG----------------------------GGIGIAAICS 380 (393)
T ss_pred hCCC--cccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhcC----------------------------CCeEEEEEcc
Confidence 2211 123444444447899999999999999999998621 3457887888
Q ss_pred ccceeeeeEeee
Q 040515 238 FGGTNASLLFTK 249 (251)
Q Consensus 238 ~gG~~~~~vl~~ 249 (251)
.||...++|||+
T Consensus 381 ~gG~g~a~~~e~ 392 (393)
T PRK08235 381 GGGQGDAVLIEV 392 (393)
T ss_pred cccceEEEEEEe
Confidence 889999999986
No 75
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=99.83 E-value=1.8e-19 Score=156.05 Aligned_cols=223 Identities=18% Similarity=0.194 Sum_probs=145.1
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChh---h----HH------HHhh-hh--------hcc---
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL---S----MA------GFCK-SR--------ALT--- 56 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~---~----~~------~~~~-~~--------~l~--- 56 (251)
|...++++|+|+..+|..|+++|++|.+|++||+|+|++.... . +. .+.. .+ .+.
T Consensus 74 ~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~y 153 (388)
T PRK08142 74 HVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRH 153 (388)
T ss_pred eeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHH
Confidence 4567889999999999999999999999999999999743210 0 00 0000 00 000
Q ss_pred -cccCCC------------------CCC------------------------cccccccCCCcc---chhhhhhcCCeEE
Q 040515 57 -TKYNGT------------------PQE------------------------ASRPFDCGRDGF---ELEHAKKRGAKIY 90 (251)
Q Consensus 57 -~~~~~~------------------~~~------------------------~~~~f~~~~~g~---~~~~A~~~g~~~~ 90 (251)
+.++.+ |.- .|-|..+++-.+ +.+.|++.+ .+.
T Consensus 154 m~~yG~t~e~la~vav~~~~~A~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~-~~~ 232 (388)
T PRK08142 154 MHEYGTTSEQLAWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLK-RPL 232 (388)
T ss_pred HHHHCcCHHHHHHHHHHHHHHhccCChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcC-CCC
Confidence 000000 000 000011111111 556676665 445
Q ss_pred EEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH-hhcc--------
Q 040515 91 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV-FSDH-------- 161 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~-~~~~-------- 161 (251)
++|+|++..++......++........+++++|++||++|+|||++|+|++.+.. |...++.+ |+.+
T Consensus 233 v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~~----~~~~~E~lGl~~~Ge~~~~v~ 308 (388)
T PRK08142 233 VKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTIT----VLMQLEDLGFCKKGEGGKFVA 308 (388)
T ss_pred EEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchHH----HHHHHHHcCCCCCCchHHHHH
Confidence 8999999887754333333344556789999999999999999999999998876 77777665 2211
Q ss_pred ----CC-CCceeeecccCC--ccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEe
Q 040515 162 ----AT-SGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSN 234 (251)
Q Consensus 162 ----~~-~~~~~v~~~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 234 (251)
.. ++.+||+...+. .|||.+|+|+.+++++++||+...- ...|..+.+++|++
T Consensus 309 ~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~ag--------------------~~rQV~~a~~gl~~ 368 (388)
T PRK08142 309 DGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAH--------------------PAVQVPNCDLALAH 368 (388)
T ss_pred CCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcCCCC--------------------CCCCCCCCcEEEEe
Confidence 11 256899888885 4899999999999999999997430 12244567899999
Q ss_pred cccc-cc---eeeeeEeee
Q 040515 235 SFGF-GG---TNASLLFTK 249 (251)
Q Consensus 235 ~~g~-gG---~~~~~vl~~ 249 (251)
+.|. .| .++.+||++
T Consensus 369 ~~Gg~~~~~~~~~~~vl~~ 387 (388)
T PRK08142 369 GTGGLLGSRHGSATLILER 387 (388)
T ss_pred CCCCCCcCCCceEEEEEec
Confidence 8873 22 335666654
No 76
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.83 E-value=1.4e-19 Score=157.24 Aligned_cols=130 Identities=21% Similarity=0.257 Sum_probs=96.0
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+.+.|++.+.+++++|+++....+... ....+...+++++|+++|++++|||++|+|...+.. |...++.+
T Consensus 250 s~e~a~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~a~~~a~~~agi~~~did~~e~~d~Fa~~----~~~~~e~l 320 (382)
T PRK07801 250 SERAVKRHGLTPRARIHHLSVRGDDPV-----FMLTAPIPATRYALEKTGLSIDDIDVVEINEAFAPV----VLAWLKET 320 (382)
T ss_pred cHHHHHHCCCCccEEEEEEEEecCChH-----hhccChHHHHHHHHHHcCCCHHHcCEeeecccchHH----HHHHHHHh
Confidence 667788888778889998776553211 011233578999999999999999999999655544 44444443
Q ss_pred hhccCCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEec
Q 040515 158 FSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNS 235 (251)
Q Consensus 158 ~~~~~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~ 235 (251)
+ .. +-||+...+ .+|||.+|+|+.+++++++||+.. +.++++.++
T Consensus 321 -G-~~---~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~----------------------------~~~~gl~~~ 367 (382)
T PRK07801 321 -G-AD---PAKVNPNGGAIALGHPLGATGAKLMTTLLHELERT----------------------------GGRYGLQTM 367 (382)
T ss_pred -C-CC---chhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhc----------------------------CCCEEEEEE
Confidence 1 00 126666666 579999999999999999999861 246789999
Q ss_pred ccccceeeeeEeee
Q 040515 236 FGFGGTNASLLFTK 249 (251)
Q Consensus 236 ~g~gG~~~~~vl~~ 249 (251)
+|.||+..++||++
T Consensus 368 ~gggg~~~~~vl~~ 381 (382)
T PRK07801 368 CEGGGTANVTIIER 381 (382)
T ss_pred cccccceeEEEEEe
Confidence 99899999999986
No 77
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=99.82 E-value=3.7e-19 Score=153.59 Aligned_cols=145 Identities=20% Similarity=0.210 Sum_probs=104.4
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCC-ChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCcCCcHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI-DGKGAILAMTRALKQSGLQ--SHQVDYVNAHATSTPLGDTVEATAI 154 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~-~~~~~~~a~~~al~~Agi~--~~dId~i~~h~~gt~~~D~~E~~a~ 154 (251)
+.+.|++.+.++. +|+|++...+.......+. .......+.+++|++|||+ ++|||++|+|+..+.. |...+
T Consensus 221 s~~~a~~l~~~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft~~----~l~~~ 295 (385)
T PRK06066 221 SEEVAKKLTDDPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYSYK----ELQHI 295 (385)
T ss_pred CHHHHHhcCCCCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCChHH----HHHHH
Confidence 5566776666664 8999887665322211111 2233457999999999998 6999999999888776 66666
Q ss_pred HHH-hhc------------cCCCCceeeecccCC--ccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCc
Q 040515 155 RTV-FSD------------HATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMP 219 (251)
Q Consensus 155 ~~~-~~~------------~~~~~~~~v~~~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~ 219 (251)
+.+ |.. ...++++||+...+. .|||.+|+|+.+++++++||+...
T Consensus 296 e~lG~~~~Ge~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~A-------------------- 355 (385)
T PRK06066 296 EALRLSEEPEKDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGEA-------------------- 355 (385)
T ss_pred HHcCCCCCCchHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHcccc--------------------
Confidence 555 211 123467899999985 599999999999999999999854
Q ss_pred cccCCCCCCcEEEEeccc--ccceeeeeEeee
Q 040515 220 LTASKDMPISAALSNSFG--FGGTNASLLFTK 249 (251)
Q Consensus 220 ~~~~~~~~~~~~lv~~~g--~gG~~~~~vl~~ 249 (251)
..+| .+.+++++++.| +++..+.+|||+
T Consensus 356 -g~rQ-~~a~~~l~~~~gg~~~~~~~v~v~~~ 385 (385)
T PRK06066 356 -GARQ-GKAERAVVASWRGIPTLTGSVVVVER 385 (385)
T ss_pred -cccC-CCCcEEEEcCCCccCCccEEEEEEeC
Confidence 3344 567889998877 556777777774
No 78
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=99.82 E-value=2.8e-20 Score=150.42 Aligned_cols=105 Identities=29% Similarity=0.363 Sum_probs=79.6
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+.+.+.+.|.+|+++|.+|+-.. ..|.....+...++.++|++||++.+|||++|.+ |+++...+
T Consensus 264 s~e~~~~~glkPLArIv~~~dAa-----~~P~df~iaP~laipk~lk~aG~~~sdVd~~EiN----------EAFs~v~l 328 (396)
T KOG1390|consen 264 SGEAAKELGLKPLARIVAWGDAA-----TEPIDFTIAPALAIPKALKKAGLEQSDVDYWEIN----------EAFSVVVL 328 (396)
T ss_pred chhhHhHcCCchHHHHhhhhhhc-----cChhhcccchHHHHHHHHHHcCcchhhhhHHhhh----------hhhhHHHH
Confidence 45667788999999999988654 2333334456788999999999999999999999 99987666
Q ss_pred hhccCCC-CceeeecccC--CccchhhhhhHHHHHHHHHHHhh
Q 040515 158 FSDHATS-GSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHH 197 (251)
Q Consensus 158 ~~~~~~~-~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~ 197 (251)
-.....+ +|-.|+-..+ .+|||+|.||..-+...++.|+.
T Consensus 329 A~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 329 ANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred HHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHh
Confidence 4322221 2223443334 78999999999999999999986
No 79
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.82 E-value=2.9e-19 Score=154.55 Aligned_cols=130 Identities=19% Similarity=0.251 Sum_probs=95.9
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+.+.|++.+.+++++|.|++...+.. .....+...+++++|+++|++++|||+||.| |+++...+
T Consensus 285 See~A~~lg~~p~a~I~g~~~a~~~p-----~~~~~~p~~Ai~~aL~~AGl~~~DID~~ei~----------eaFa~~~l 349 (417)
T PRK06025 285 SKAYAEKHGLKPRARIVAMANMGDDP-----TLMLNAPVPAAKKVLAKAGLTKDDIDLWEIN----------EAFAVVAE 349 (417)
T ss_pred cHHHHHHcCCCCcEEEEEEEEecCCc-----hhhcccHHHHHHHHHHHcCCCHHHCcEEEEc----------hHHHHHHH
Confidence 55678888888899999998876432 1122345689999999999999999999999 66655433
Q ss_pred hh--ccC-CCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEe
Q 040515 158 FS--DHA-TSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSN 234 (251)
Q Consensus 158 ~~--~~~-~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 234 (251)
.. ... ...++.++.-+-.+||+.|++|+.+++.++.+|+.+ +.+++++.
T Consensus 350 ~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~----------------------------g~~~Gl~~ 401 (417)
T PRK06025 350 KFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERR----------------------------GLKRGLVT 401 (417)
T ss_pred HHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHHHHHHHHh----------------------------CCCeEEEE
Confidence 21 111 112344444444889999999999999999999751 13567888
Q ss_pred cccccceeeeeEeeec
Q 040515 235 SFGFGGTNASLLFTKC 250 (251)
Q Consensus 235 ~~g~gG~~~~~vl~~~ 250 (251)
.++.||...++|||+.
T Consensus 402 ~c~~GG~g~A~lle~~ 417 (417)
T PRK06025 402 MCAAGGMAPAIIIERV 417 (417)
T ss_pred EEeeccceeEEEEEeC
Confidence 8899999999999873
No 80
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.81 E-value=3.1e-19 Score=156.82 Aligned_cols=136 Identities=18% Similarity=0.238 Sum_probs=97.9
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++.|++.+.++.++|.++...... +.....+...+++++|+++||+++|||++|+|...+.. |...++.+
T Consensus 277 s~e~A~~~~~~p~~~i~~~~~~~~~-----~~~~~~~~~~a~~~al~~aGl~~~did~~ei~daFa~~----~l~~l~~l 347 (426)
T PRK08170 277 SEEAVKKYGLPPLGRIVDSQWAALD-----PSQMGLGPVHAATPLLQRHGLTLEDLDLWEINEAFAAQ----VLACLAAW 347 (426)
T ss_pred cHHHHHHCCCCceEEEEEeeEeeeC-----chhhcccHHHHHHHHHHHcCCCHHHcCEEEecchhHHH----HHHHHHHh
Confidence 6677888887887888888765432 22223356789999999999999999999999444332 22111111
Q ss_pred ----hhcc--------CCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccC
Q 040515 158 ----FSDH--------ATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTAS 223 (251)
Q Consensus 158 ----~~~~--------~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~ 223 (251)
|+.. ..-.+.||+...+ .+|||.||||+.++..++.+|++
T Consensus 348 e~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG~~~~~~l~~~l~~-------------------------- 401 (426)
T PRK08170 348 ADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLLHALKR-------------------------- 401 (426)
T ss_pred ccccchhcccccccccCCCCcceecCCCCHHHhCCCccCccHHHHHHHHHHHHh--------------------------
Confidence 1111 0012368888888 45999999999999999999986
Q ss_pred CCCCCcEEEEecccccceeeeeEeeec
Q 040515 224 KDMPISAALSNSFGFGGTNASLLFTKC 250 (251)
Q Consensus 224 ~~~~~~~~lv~~~g~gG~~~~~vl~~~ 250 (251)
.+.++++++.+..||...++|||+.
T Consensus 402 --~~~~~g~~~~c~~gg~g~a~~~e~~ 426 (426)
T PRK08170 402 --RGTKRGIAAICIGGGQGGAMLLERV 426 (426)
T ss_pred --hCCCeEEEEEecCCChhheEEEEeC
Confidence 2346899999999999999999973
No 81
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=99.80 E-value=8.6e-19 Score=153.63 Aligned_cols=141 Identities=15% Similarity=0.131 Sum_probs=94.8
Q ss_pred chhhhhhcCCeEEEEE-eeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEV-RGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRT 156 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i-~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~ 156 (251)
+.+.|++.+.++..+| .+.....+.... +.........+++++|++||++++|||++|+|...+.. -..|...++.
T Consensus 275 s~~~A~~l~~~p~~~i~~~~~~~~~~~~~--~~~~~~~~~~a~~~a~~~AGl~~~Did~~Ei~d~Fa~~-~l~~l~~~e~ 351 (427)
T PRK09268 275 SEEWAAEHGLPVLAYLVDAETAAVDFVHG--KEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHEAFASQ-VLATLKAWED 351 (427)
T ss_pred cHHHHHHcCCCceEEEEEEEEEcCCcccc--cchhhccHHHHHHHHHHHcCCCHHHCCEEEeccccHHH-HHHHHHHhhh
Confidence 5566777776776566 455544543211 11122355679999999999999999999999555433 0111111121
Q ss_pred H-hhccCC--------CCceeeecccCC--ccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCC
Q 040515 157 V-FSDHAT--------SGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 225 (251)
Q Consensus 157 ~-~~~~~~--------~~~~~v~~~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~ 225 (251)
+ |+.+.. ...+||+...+. +|||.+|||+.+++++++||+.+
T Consensus 352 lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~~~v~e~~~QL~~~--------------------------- 404 (427)
T PRK09268 352 EEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAEK--------------------------- 404 (427)
T ss_pred ccccccccccccccCcCCCcccCCCcCHHhcCCCcccchHHHHHHHHHHHHhc---------------------------
Confidence 1 111100 114788888885 59999999999999999999862
Q ss_pred CCCcEEEEecccccceeeeeEeee
Q 040515 226 MPISAALSNSFGFGGTNASLLFTK 249 (251)
Q Consensus 226 ~~~~~~lv~~~g~gG~~~~~vl~~ 249 (251)
..++++++.+..||...++|||+
T Consensus 405 -~~~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 405 -GSGRGLISICAAGGQGVTAILER 427 (427)
T ss_pred -CCCEEEEEEcccCchheEEEEeC
Confidence 24689999999999999999985
No 82
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=99.76 E-value=1.7e-18 Score=137.16 Aligned_cols=221 Identities=22% Similarity=0.296 Sum_probs=142.1
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHH-h-------hhhhcccc---------------
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGF-C-------KSRALTTK--------------- 58 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~-~-------~~~~l~~~--------------- 58 (251)
|.+.|++.|++|..||.+|.+.|++|..|.+|+.|+|+|........+ + +...++..
T Consensus 79 pi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqmfgn 158 (408)
T KOG1406|consen 79 PIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQMFGN 158 (408)
T ss_pred ceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHHhhh
Confidence 678999999999999999999999999999999999986532110000 0 00000000
Q ss_pred --------cCC------------CCCCcccccccCCCccchhh---------------------------------hhhc
Q 040515 59 --------YNG------------TPQEASRPFDCGRDGFELEH---------------------------------AKKR 85 (251)
Q Consensus 59 --------~~~------------~~~~~~~~f~~~~~g~~~~~---------------------------------A~~~ 85 (251)
++. .......|+++-++.|++++ .++.
T Consensus 159 agkehmekygtk~ehfakiawknhkhsvnnpysqf~deysldqvm~s~~v~dflt~lqccptsdgaaaailaseafv~k~ 238 (408)
T KOG1406|consen 159 AGKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYSQFRDEYSLDQVMKSPQVVDFLTKLQCCPTSDGAAAAILASEAFVRKH 238 (408)
T ss_pred hHHHHHHHhCCCHHHHhHhhhhccccccCChhHhhhhhccHHHHhcchHHHHHHHHhhcCCCCCchHHHHHhHHHHHHhc
Confidence 000 01112335555555553221 1122
Q ss_pred CCe-EEEEEeeeeecCCCCCCCCCCC-----ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHh-
Q 040515 86 GAK-IYAEVRGYGMSGDAHHITQPHI-----DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVF- 158 (251)
Q Consensus 86 g~~-~~a~i~g~~~~~~~~~~~~~~~-----~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~- 158 (251)
+-. -..+|.|..+.+|..+...... -.+..+.+.++.+++.|++|.||++||+|++..+. |...++.+-
T Consensus 239 gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielhdcfs~n----elityealgl 314 (408)
T KOG1406|consen 239 GLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELHDCFSAN----ELITYEALGL 314 (408)
T ss_pred ccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEeecccchh----hhhhHHHhcC
Confidence 211 1234566666666543221111 12356788899999999999999999999998775 555555441
Q ss_pred ------------hccCCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCC
Q 040515 159 ------------SDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASK 224 (251)
Q Consensus 159 ------------~~~~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~ 224 (251)
+++..++.+.|+...+ .-|||+||+|+++.++.++|||... ..++
T Consensus 315 cpegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcwqlrg~a---------------------gkrq 373 (408)
T KOG1406|consen 315 CPEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRGLA---------------------GKRQ 373 (408)
T ss_pred CCCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHHHhhhh---------------------cccc
Confidence 2223345566666666 4599999999999999999999844 3445
Q ss_pred CCCCcEEEEecccccceeeeeEe
Q 040515 225 DMPISAALSNSFGFGGTNASLLF 247 (251)
Q Consensus 225 ~~~~~~~lv~~~g~gG~~~~~vl 247 (251)
..+.+.++.++.|.||.....+.
T Consensus 374 vpnakvalqhnlgiggavvv~ly 396 (408)
T KOG1406|consen 374 VPNAKVALQHNLGIGGAVVVALY 396 (408)
T ss_pred CCCchhhhhhccCcCceeEEEEe
Confidence 55678899999999987655543
No 83
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=99.72 E-value=1.5e-17 Score=134.41 Aligned_cols=103 Identities=26% Similarity=0.405 Sum_probs=82.8
Q ss_pred hhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhh
Q 040515 80 EHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS 159 (251)
Q Consensus 80 ~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~ 159 (251)
..|.+.|-+++++++.+.... ..|..++.+...++..+|+.+|++.+|||++|++ |++|-+.+++
T Consensus 292 s~A~qlgLPvlgvfr~f~~vG-----v~P~iMGiGPavAIp~alk~aGL~v~did~FEIN----------EAFAsQ~~yc 356 (435)
T KOG1389|consen 292 SVAMQLGLPVLGVFRDFAAVG-----VPPAIMGIGPAVAIPKALKAAGLEVDDIDLFEIN----------EAFASQALYC 356 (435)
T ss_pred hhHhhcCCceeEEeeeeeeec-----CCHHHcCCCchhhhHHHHHHcCCcccccceeehh----------HHHHHHHHHH
Confidence 456678889999998887655 3455566778899999999999999999999999 9999999998
Q ss_pred ccCCCC-ceeeecccC--CccchhhhhhHHHHHHHHHHHhh
Q 040515 160 DHATSG-SLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHH 197 (251)
Q Consensus 160 ~~~~~~-~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~ 197 (251)
.+..+. +-.|+-..+ .+|||+||+|..+++-.+.-|++
T Consensus 357 ~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKr 397 (435)
T KOG1389|consen 357 RNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKR 397 (435)
T ss_pred HHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHh
Confidence 655431 223444444 68999999999999999998876
No 84
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=99.69 E-value=9e-17 Score=139.56 Aligned_cols=44 Identities=39% Similarity=0.555 Sum_probs=41.5
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhh
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS 45 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~ 45 (251)
|.++|+..|+||+.|+..|++.|++|.+|++|++|+|++++.+.
T Consensus 84 p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~ 127 (392)
T COG0183 84 PAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPM 127 (392)
T ss_pred CceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCc
Confidence 78999999999999999999999999999999999999887653
No 85
>PRK07855 lipid-transfer protein; Provisional
Probab=99.67 E-value=1.4e-15 Score=131.97 Aligned_cols=139 Identities=16% Similarity=0.132 Sum_probs=96.6
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCC-----CCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHIT-----QPHI-DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEA 151 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~-----~~~~-~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~ 151 (251)
+++.|++.+.++ .+|+|++..++..... .++. .......+++++|++|||+++|||++|+|++.+.. |.
T Consensus 226 see~A~~l~~~p-v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~Ft~~----~l 300 (386)
T PRK07855 226 SAERARDLKQRP-AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDHFTPF----VL 300 (386)
T ss_pred cHHHHhhCCCCC-EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccCCcHH----HH
Confidence 556677666665 5899998765432111 1111 12345579999999999999999999999998876 77
Q ss_pred HHHHHH-hh------------ccCCCCceeeecccCC--ccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCC
Q 040515 152 TAIRTV-FS------------DHATSGSLAFSSTKGA--IGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDN 216 (251)
Q Consensus 152 ~a~~~~-~~------------~~~~~~~~~v~~~k~~--~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~ 216 (251)
..++.+ |+ ....++.+||+...+. .||+. |+.+++++++||+...
T Consensus 301 ~~~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~---G~~~i~E~~~QLrG~a----------------- 360 (386)
T PRK07855 301 MQLEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLGEAYIH---GMNGIAEAVRQLRGTS----------------- 360 (386)
T ss_pred HHHHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccccCchh---hHHHHHHHHHHHhCCC-----------------
Confidence 777665 21 1223467999888875 48865 8999999999999853
Q ss_pred CCccccCCCCCCcEEEEecccccceeeeeEe
Q 040515 217 FMPLTASKDMPISAALSNSFGFGGTNASLLF 247 (251)
Q Consensus 217 ~~~~~~~~~~~~~~~lv~~~g~gG~~~~~vl 247 (251)
. .|..+.+.+|+++.|.. ..+++||
T Consensus 361 ----~-~QV~~a~~gl~~~~Gg~-~~~~~~~ 385 (386)
T PRK07855 361 ----V-NQVPGVENVLVTAGTGV-PTSGLIL 385 (386)
T ss_pred ----c-ccCCCCcEEEEECCCCc-cceeEEe
Confidence 1 23455788999987744 3344555
No 86
>PRK07937 lipid-transfer protein; Provisional
Probab=99.64 E-value=7.6e-15 Score=125.66 Aligned_cols=132 Identities=17% Similarity=0.084 Sum_probs=91.9
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHH-cCCCCCCccEEEecCCCCcCCcHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ-SGLQSHQVDYVNAHATSTPLGDTVEATAIRT 156 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~ 156 (251)
+.+.|++.+.++ ++|+|++...+.......+. ....++++++++ ||++|+|||++|+|+..+.. |...++.
T Consensus 215 s~~~A~~l~~~p-v~I~g~~~~~~~~~~~~~d~---~~~~~~~~a~~~aAgi~~~diD~~Ei~D~F~~~----~l~~~e~ 286 (352)
T PRK07937 215 AGDRARELRERP-AWITGIEHRIESPSLGARDL---TRSPSTALAAEAATGGDAGGVDVAELHAPFTHQ----ELILREA 286 (352)
T ss_pred cHHHHHHcCCCc-EEEEEEEEeeCCcccccccc---ccHHHHHHHHHHhcCCCHHHCCEEEEeCCChHH----HHHHHHH
Confidence 566777777777 89999988766543211111 112344556666 59999999999999777765 6655555
Q ss_pred HhhccCCCCceeeecccCCc-cchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEec
Q 040515 157 VFSDHATSGSLAFSSTKGAI-GHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNS 235 (251)
Q Consensus 157 ~~~~~~~~~~~~v~~~k~~~-Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~ 235 (251)
+- ..+.+||+...+.+ ||+.+|+|+.+++++++||+.+ ..+++|+++
T Consensus 287 lG----l~g~~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~g~----------------------------~a~~~l~~~ 334 (352)
T PRK07937 287 LG----LGDKTKVNPSGGALAANPMFAAGLERIGEAARHIWDG----------------------------SARRALAHA 334 (352)
T ss_pred cC----CCCCCCcCCCccchhcCchhHHHHHHHHHHHHHHhcc----------------------------CCCEEEEec
Confidence 41 11337888777722 9999999999999999999873 257899988
Q ss_pred ccc--cceeeeeEeee
Q 040515 236 FGF--GGTNASLLFTK 249 (251)
Q Consensus 236 ~g~--gG~~~~~vl~~ 249 (251)
.|. +..+..+||++
T Consensus 335 ~Gg~~~~~~~v~v~~~ 350 (352)
T PRK07937 335 TSGPALQQNLVAVLEG 350 (352)
T ss_pred ccccccceEEEEEEec
Confidence 774 35566666664
No 87
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=99.64 E-value=5.8e-16 Score=122.40 Aligned_cols=130 Identities=25% Similarity=0.334 Sum_probs=95.3
Q ss_pred chhhhhhcCCeEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
+++..++.+-+|+++|.++.... ..|..++.+...+++.+|+++|+...|||.||.+ |++|-+.+
T Consensus 263 sEdavK~~NlkPLARiVays~vG-----cdP~IMGIGPvPAI~~vLKksGlkl~DiDl~EvN----------EAFApQ~L 327 (396)
T KOG1391|consen 263 SEDAVKKHNLKPLARIVAYSVVG-----CDPSIMGIGPVPAISGVLKKSGLKLKDIDLVEVN----------EAFAPQYL 327 (396)
T ss_pred chhHHhhcCCchhhhhheeeeec-----cChhhccccCcHHHHHHHHHcCCcccccceEEec----------hhhchHHH
Confidence 44455566778899998887643 2344455667789999999999999999999999 88887777
Q ss_pred hhccCCCCc---eeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEe
Q 040515 158 FSDHATSGS---LAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSN 234 (251)
Q Consensus 158 ~~~~~~~~~---~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 234 (251)
...+..+.+ +.|+.-.=.+|||+++||..-....++-|+++. .++++-+
T Consensus 328 Av~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr~----------------------------~KYgiGS 379 (396)
T KOG1391|consen 328 AVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRRG----------------------------GKYGIGS 379 (396)
T ss_pred HHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHHcC----------------------------Ccccccc
Confidence 655544322 223222237899999999999999998887632 3555555
Q ss_pred cccccceeeeeEeeec
Q 040515 235 SFGFGGTNASLLFTKC 250 (251)
Q Consensus 235 ~~g~gG~~~~~vl~~~ 250 (251)
++=.||+..++++++.
T Consensus 380 ACIGGGQGIA~l~e~~ 395 (396)
T KOG1391|consen 380 ACIGGGQGIAVLIEST 395 (396)
T ss_pred ccccCCceEEEEEEec
Confidence 6666788888888864
No 88
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=99.63 E-value=1.5e-14 Score=129.23 Aligned_cols=137 Identities=16% Similarity=0.141 Sum_probs=98.5
Q ss_pred chhhhhhcCC--eEEEEEeeeeecCCCCCCC-CCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHH
Q 040515 78 ELEHAKKRGA--KIYAEVRGYGMSGDAHHIT-QPHI-DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATA 153 (251)
Q Consensus 78 ~~~~A~~~g~--~~~a~i~g~~~~~~~~~~~-~~~~-~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a 153 (251)
+++.|++.+. ....+|.|++..++..... .++. .......+.+++|++||++++|||++|+|.+.+.. |..+
T Consensus 253 S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~~----~~~~ 328 (498)
T PRK08257 253 SVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPSA----VQVA 328 (498)
T ss_pred eHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHHH----HHHH
Confidence 5667776662 2247899998887754321 1111 23345679999999999999999999999988876 7777
Q ss_pred HHHH-hhccCCCCceeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcE
Q 040515 154 IRTV-FSDHATSGSLAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISA 230 (251)
Q Consensus 154 ~~~~-~~~~~~~~~~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (251)
++.+ |+.. +++|++...+ .+||+.+++|+.+++++++|||.+ ..++
T Consensus 329 ~E~LGl~~~---g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~----------------------------~~~~ 377 (498)
T PRK08257 329 ARELGLDLD---DPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRAN----------------------------PGRR 377 (498)
T ss_pred HHHcCcCCC---CCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhc----------------------------CCCE
Confidence 7776 4433 2467877777 569999999999999999999962 1457
Q ss_pred EEEecccc-cceeeeeEeee
Q 040515 231 ALSNSFGF-GGTNASLLFTK 249 (251)
Q Consensus 231 ~lv~~~g~-gG~~~~~vl~~ 249 (251)
+|+++.|. ...++..|+++
T Consensus 378 gLv~~~GG~~~~~~~~vl~~ 397 (498)
T PRK08257 378 GLVTANGGYLTKHSVGVYST 397 (498)
T ss_pred EEEECCCChhhceEEEEEeC
Confidence 88887763 33455556554
No 89
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=99.62 E-value=7.1e-16 Score=111.50 Aligned_cols=119 Identities=26% Similarity=0.366 Sum_probs=86.4
Q ss_pred eEEEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCC-CCc
Q 040515 88 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHAT-SGS 166 (251)
Q Consensus 88 ~~~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~-~~~ 166 (251)
+|+++|.++.... ..|.....+...+++++|+++|++++|||++|+| |+++...+...+.. -.+
T Consensus 2 ~pla~i~~~~~~~-----~~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~----------EaFA~~~l~~~~~lg~~~ 66 (123)
T PF02803_consen 2 KPLARIVGYASAG-----VDPEDMGLGPVPAARKALERAGLTPDDIDVIEIN----------EAFAAQVLAFLEALGLDP 66 (123)
T ss_dssp -ESEEEEEEEEEE-------GGGGGGTHHHHHHHHHHHHT--GGGESEEEE------------SBHHHHHHHHHHHTTGG
T ss_pred CeEEEEEEEEEEe-----cCHHHhCchHHHHHHHHHHHhCCCccccchhhcc----------chhhhHHHHhhccccccc
Confidence 5778999988765 2344445567889999999999999999999999 77777666432111 122
Q ss_pred eeeecccC--CccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEecccccceeee
Q 040515 167 LAFSSTKG--AIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNAS 244 (251)
Q Consensus 167 ~~v~~~k~--~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~g~gG~~~~ 244 (251)
.+|+...+ .+|||.||||+..++.++++|+++ ..++++.+..+.||...+
T Consensus 67 ~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~~~----------------------------~~~~gla~~~~ggG~g~a 118 (123)
T PF02803_consen 67 EKVNPNGGALALGHPLGASGARLVVELAHQLRRR----------------------------GGRYGLAAICAGGGQGSA 118 (123)
T ss_dssp GGBSTT--HHHH-BHTTTHHHHHHHHHHHHHHHH----------------------------TTSEEEEEEEETTTEEEE
T ss_pred cccCcccccccccccccccccchhhhhHHHHHHh----------------------------chhhhhHHhcccceeeEE
Confidence 56777777 679999999999999999999862 246788989999999999
Q ss_pred eEeee
Q 040515 245 LLFTK 249 (251)
Q Consensus 245 ~vl~~ 249 (251)
+||||
T Consensus 119 ~ller 123 (123)
T PF02803_consen 119 VLLER 123 (123)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 99987
No 90
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=99.59 E-value=6.4e-16 Score=123.95 Aligned_cols=131 Identities=22% Similarity=0.266 Sum_probs=90.5
Q ss_pred chhhhhhcCCeEEEEEeeeee-cCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHH
Q 040515 78 ELEHAKKRGAKIYAEVRGYGM-SGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRT 156 (251)
Q Consensus 78 ~~~~A~~~g~~~~a~i~g~~~-~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~ 156 (251)
++|.|++.|-++.++++.+-. .+|.... ...+....+.+.|++||++..|||.+|.| |+++-+.
T Consensus 313 teekala~gykpkaylrdflyvsqdpkdq-----lllgpay~ipkll~kagltlkdid~feih----------eafagqi 377 (465)
T KOG1392|consen 313 TEEKALANGYKPKAYLRDFLYVSQDPKDQ-----LLLGPAYVIPKLLDKAGLTLKDIDVFEIH----------EAFAGQI 377 (465)
T ss_pred hHHHHHHcCCCchHHhhhheeeccCchhh-----eecccccccHHHHHHcCCcccccchhhhH----------HHHhHHH
Confidence 456677777777777777543 3433211 11234567889999999999999999999 8887554
Q ss_pred H----------hhcc-----CCCCceee-----ecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCC
Q 040515 157 V----------FSDH-----ATSGSLAF-----SSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDN 216 (251)
Q Consensus 157 ~----------~~~~-----~~~~~~~v-----~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~ 216 (251)
+ |+.. ..-+..|+ +.-.-.+|||+||+|+.-.......|+.
T Consensus 378 lanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgvrl~mh~anrl~~------------------- 438 (465)
T KOG1392|consen 378 LANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGVRLAMHSANRLKE------------------- 438 (465)
T ss_pred HhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccchhhHHHHHhHHHh-------------------
Confidence 3 2211 11112222 1111278999999999888887766654
Q ss_pred CCccccCCCCCCcEEEEecccccceeeeeEeeecC
Q 040515 217 FMPLTASKDMPISAALSNSFGFGGTNASLLFTKCQ 251 (251)
Q Consensus 217 ~~~~~~~~~~~~~~~lv~~~g~gG~~~~~vl~~~~ 251 (251)
...++++|-++..||+...+++|.|+
T Consensus 439 ---------e~gqygvvaacaaggqgvamlieayp 464 (465)
T KOG1392|consen 439 ---------EKGQYGVVAACAAGGQGVAMLIEAYP 464 (465)
T ss_pred ---------hcCceeEeehhhcCCcceEEEeeccC
Confidence 23578999999999999999999985
No 91
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.40 E-value=1e-12 Score=114.14 Aligned_cols=198 Identities=17% Similarity=0.171 Sum_probs=117.7
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchh
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELE 80 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~ 80 (251)
+|+++++.+|+|++.||..|+++|++|.+|.+||+++|.+.....+ . . + ....-|.+.+....++
T Consensus 146 ~~~~~v~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~---~------d-----~-~~~~lfGDgAaA~vL~ 210 (372)
T PRK07515 146 GFAFDMNVACSSATFGIQTAANAIRSGSARRVLVVNPEICSGHLNF---R------D-----R-DSHFIFGDVATAVIVE 210 (372)
T ss_pred CcEEEecchhHHHHHHHHHHHHHHHcCCCCEEEEEeeecccccccc---c------C-----C-CCCEEecCccEEEEEe
Confidence 4678999999999999999999999999999999999985422211 0 0 0 0112244443333222
Q ss_pred h---hhhcC-CeEEEEEe------------eeeecCCCCCCCCCCC----ChH--------HHHHHHHHHHHHcCCCCCC
Q 040515 81 H---AKKRG-AKIYAEVR------------GYGMSGDAHHITQPHI----DGK--------GAILAMTRALKQSGLQSHQ 132 (251)
Q Consensus 81 ~---A~~~g-~~~~a~i~------------g~~~~~~~~~~~~~~~----~~~--------~~~~a~~~al~~Agi~~~d 132 (251)
. +.+++ ..++.... |+....+......+.. ++. .+.++++++|+++|++++|
T Consensus 211 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~d 290 (372)
T PRK07515 211 RADTATSAGGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPAD 290 (372)
T ss_pred eccccccCCCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 1 11111 12333221 1110011111111110 121 2568899999999999999
Q ss_pred ccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCC
Q 040515 133 VDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPI 212 (251)
Q Consensus 133 Id~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~ 212 (251)
||+|.+|.+++...|.+ ++++|+-.......+. .-..+||+.+|+=.+.+.++ +. .
T Consensus 291 Id~~~~Hq~~~~~~d~~----~~~llg~~~~~~~~~~--~~~~~GNt~sasi~~~L~~~----~~-~------------- 346 (372)
T PRK07515 291 VKRFWLHQANINMNQLI----GKKVLGRDATPEEAPV--ILDEYANTSSAGSIIAFHKH----SD-D------------- 346 (372)
T ss_pred CCEEEECCCCHHHHHHH----HHHhccCCCChhhceE--eHHhcCCchhhHHHHHHHHH----hc-c-------------
Confidence 99999999999987765 3344442211111222 23578999999865544432 11 1
Q ss_pred CCCCCCccccCCCCCCcEEEEecccccceeeeeEeee
Q 040515 213 FNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTK 249 (251)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~lv~~~g~gG~~~~~vl~~ 249 (251)
..+.+.+++.+||.|-+..++||+|
T Consensus 347 ------------~~~Gd~vll~~~G~G~~~~~~ll~~ 371 (372)
T PRK07515 347 ------------LAAGDLGVICSFGAGYSIGSVIVRK 371 (372)
T ss_pred ------------CCCCCEEEEEEecccHHHHHHHhcc
Confidence 0123568888999888888888876
No 92
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=99.37 E-value=1.4e-12 Score=107.42 Aligned_cols=75 Identities=37% Similarity=0.655 Sum_probs=63.5
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchh
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELE 80 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~ 80 (251)
||+++++++|+||+.||..|+++|++|++|++||||+|..+++..+..|..++.++.. +.++||+..++|+...
T Consensus 167 G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~------~~~~pf~~~~~G~v~g 240 (254)
T PF00109_consen 167 GPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSAD------GPCRPFDPFADGFVLG 240 (254)
T ss_dssp SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TT------SGGGSTBTTB-SB-BB
T ss_pred Cccccccccccccccccchhcccccccccccccccccccccccccccccccccccccc------ccccccCCCCCCEEEE
Confidence 8999999999999999999999999999999999999988999999999999977642 6799999999999554
Q ss_pred h
Q 040515 81 H 81 (251)
Q Consensus 81 ~ 81 (251)
+
T Consensus 241 E 241 (254)
T PF00109_consen 241 E 241 (254)
T ss_dssp -
T ss_pred C
Confidence 4
No 93
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.24 E-value=7.1e-11 Score=100.48 Aligned_cols=189 Identities=16% Similarity=0.168 Sum_probs=110.9
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchhh
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELEH 81 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~~ 81 (251)
|.++|+.+|+|++.||..|+++|++|.+|.+||+|+|.+.....+. . + .....|.+.+....++.
T Consensus 105 ~~~~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~---------~-----~-~~~~~~gDGaaA~ll~~ 169 (319)
T PRK09352 105 AAFDLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIVDWT---------D-----R-STCVLFGDGAGAVVLGA 169 (319)
T ss_pred cEeeccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhccccCcc---------c-----C-CceEEEeccceEEEEEE
Confidence 6788999999999999999999999999999999999854322100 0 0 11123433333332221
Q ss_pred hhhcCCeEEEEEeeeeecCCCCC---CCCCC-------------CC--------hHHHHHHHHHHHHHcCCCCCCccEEE
Q 040515 82 AKKRGAKIYAEVRGYGMSGDAHH---ITQPH-------------ID--------GKGAILAMTRALKQSGLQSHQVDYVN 137 (251)
Q Consensus 82 A~~~g~~~~a~i~g~~~~~~~~~---~~~~~-------------~~--------~~~~~~a~~~al~~Agi~~~dId~i~ 137 (251)
-.. .. +.++...+++.. ...|. .. ...+.++++++|+++|++++||+++.
T Consensus 170 ~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~~ 243 (319)
T PRK09352 170 SEE--PG----ILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLTPEDIDWLV 243 (319)
T ss_pred cCC--CC----eEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 100 01 112222222110 00000 00 12345688999999999999999999
Q ss_pred ecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCC
Q 040515 138 AHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNF 217 (251)
Q Consensus 138 ~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~ 217 (251)
.|..+....+. +.+.++-... .+ ......+||..+|+-++.+..++ +.+.
T Consensus 244 ~h~~~~~~~~~-----~~~~lg~~~~--~~--~~~~~~~Gn~~~a~~~~~L~~~~---~~g~------------------ 293 (319)
T PRK09352 244 PHQANLRIIDA-----TAKKLGLPME--KV--VVTVDKYGNTSAASIPLALDEAV---RDGR------------------ 293 (319)
T ss_pred ECCCCHHHHHH-----HHHHhCCCHH--Hh--hhhHHhhCCHHHHHHHHHHHHHH---HcCC------------------
Confidence 99655433222 2222221110 11 12234799999999777776554 2222
Q ss_pred CccccCCCCCCcEEEEecccccceeeeeEee
Q 040515 218 MPLTASKDMPISAALSNSFGFGGTNASLLFT 248 (251)
Q Consensus 218 ~~~~~~~~~~~~~~lv~~~g~gG~~~~~vl~ 248 (251)
..+.+..++-++|.|-+-.+++|+
T Consensus 294 -------~~~Gd~vll~s~G~G~~~~~~ll~ 317 (319)
T PRK09352 294 -------IKRGDLVLLEGFGGGLTWGAALVR 317 (319)
T ss_pred -------CCCCCEEEEEEEchhheeEEEEEE
Confidence 123466778899998888888876
No 94
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=99.21 E-value=2.2e-10 Score=97.38 Aligned_cols=190 Identities=16% Similarity=0.190 Sum_probs=111.8
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchhh
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELEH 81 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~~ 81 (251)
|.++|+.+|+|++.||..|+.+|++|.++.+||+++|.+.....+. .......|.+.+....++.
T Consensus 104 ~~~~v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~~~~~---------------~~~~~~~~GDGAaA~lL~~ 168 (318)
T TIGR00747 104 PAFDLSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTLDWT---------------DRGTCVLFGDGAGAVVLGE 168 (318)
T ss_pred cEeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcCCcC---------------CCCeEEEEecceeEEEEee
Confidence 6788999999999999999999999999999999999854332100 0011122444433333221
Q ss_pred hhhcCCeEEEEEeeeeecCCCC---CCCCC----------------C-----CChHHHHHHHHHHHHHcCCCCCCccEEE
Q 040515 82 AKKRGAKIYAEVRGYGMSGDAH---HITQP----------------H-----IDGKGAILAMTRALKQSGLQSHQVDYVN 137 (251)
Q Consensus 82 A~~~g~~~~a~i~g~~~~~~~~---~~~~~----------------~-----~~~~~~~~a~~~al~~Agi~~~dId~i~ 137 (251)
....+ . |......+++. ....+ . ........+++++|+++|++++||+++.
T Consensus 169 ~~~~~-~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~di~~~~ 243 (318)
T TIGR00747 169 SEDPG-G----IISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPEDIDWFV 243 (318)
T ss_pred cCCCC-c----EEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 11111 1 11121111111 00000 0 0012345678899999999999999999
Q ss_pred ecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCC
Q 040515 138 AHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNF 217 (251)
Q Consensus 138 ~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~ 217 (251)
.|..+....+. +.+.++-... ++. ... ..+||+.+|+=++.+..++ +.+.+
T Consensus 244 ~h~~~~~~~~~-----~~~~lgi~~~--k~~-~~~-~~~Gn~~sas~~~~L~~~~---~~~~~----------------- 294 (318)
T TIGR00747 244 PHQANLRIIEA-----LAKRLELDMS--QVV-KTV-HKYGNTSAASIPLALDELL---RTGRI----------------- 294 (318)
T ss_pred ECCCCHHHHHH-----HHHHcCCCHH--Hee-ehH-hhhCCHHHHHHHHHHHHHH---HcCCC-----------------
Confidence 99776553222 2233322111 122 223 3599999999777765543 23221
Q ss_pred CccccCCCCCCcEEEEecccccceeeeeEee
Q 040515 218 MPLTASKDMPISAALSNSFGFGGTNASLLFT 248 (251)
Q Consensus 218 ~~~~~~~~~~~~~~lv~~~g~gG~~~~~vl~ 248 (251)
.+.+.+++-++|.|.+..+++|+
T Consensus 295 --------~~Gd~vll~~~G~G~t~~~~~l~ 317 (318)
T TIGR00747 295 --------KPGDLLLLVAFGGGLTWGAALVR 317 (318)
T ss_pred --------CCCCEEEEEEEehhheeeEEEEE
Confidence 22356777789999888888876
No 95
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.20 E-value=3e-10 Score=97.08 Aligned_cols=194 Identities=17% Similarity=0.202 Sum_probs=115.3
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchhh
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELEH 81 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~~ 81 (251)
|+++|+.+|+|++.||..|..+|++|.++.+||+++|.......+... ....-|.+.+....++.
T Consensus 107 ~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~~~~~~~---------------~~~~lfGDGAaA~ll~~ 171 (329)
T PRK07204 107 PCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSVGLNWGQN---------------ESCILFGDGAAAVVITK 171 (329)
T ss_pred eEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccCCCCcccC---------------cceEEEecccEEEEEEE
Confidence 678899999999999999999999999999999999985432111000 01122333333332221
Q ss_pred hhhcCCeE-------------EEEEeeeeecCCCCCCCCC-------CCC--------hHHHHHHHHHHHHHcCCCCCCc
Q 040515 82 AKKRGAKI-------------YAEVRGYGMSGDAHHITQP-------HID--------GKGAILAMTRALKQSGLQSHQV 133 (251)
Q Consensus 82 A~~~g~~~-------------~a~i~g~~~~~~~~~~~~~-------~~~--------~~~~~~a~~~al~~Agi~~~dI 133 (251)
- ..+.++ +..+.+.+...+....... ..+ .....++++++|+++|++++||
T Consensus 172 ~-~~~~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~di 250 (329)
T PRK07204 172 G-DHSSRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTLADI 250 (329)
T ss_pred c-CCCCcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 0 000111 1222222211111000000 001 1124578999999999999999
Q ss_pred cEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCC
Q 040515 134 DYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIF 213 (251)
Q Consensus 134 d~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~ 213 (251)
|+|..|..+... ..++.+.++-... .+......+||+.+|+=.+.+..+ ++.+.
T Consensus 251 d~~~~H~~~~~~-----~~~i~~~l~l~~e----~~~~~~~~~Gn~~sas~~~~L~~~---~~~g~-------------- 304 (329)
T PRK07204 251 DLIVPHQASGPA-----MRLIRKKLGVDEE----RFVTIFEDHGNMIAASIPVALFEA---IKQKK-------------- 304 (329)
T ss_pred CEEEeCCCCHHH-----HHHHHHHcCCCHH----HhhhhHhhhCcHHHHHHHHHHHHH---HHcCC--------------
Confidence 999999877654 2344444432211 122455688999988866555543 23322
Q ss_pred CCCCCccccCCCCCCcEEEEecccccceeeeeEee
Q 040515 214 NDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 248 (251)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~lv~~~g~gG~~~~~vl~ 248 (251)
..+.+.+++.++|.|-+..+++|+
T Consensus 305 -----------~~~Gd~vll~~~G~G~s~~~~ll~ 328 (329)
T PRK07204 305 -----------VQRGNKILLLGTSAGLSIGGILLE 328 (329)
T ss_pred -----------CCCCCEEEEEEEchhhhheeeEEe
Confidence 123467888899999999988886
No 96
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.07 E-value=3.7e-09 Score=90.15 Aligned_cols=194 Identities=18% Similarity=0.149 Sum_probs=110.1
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchhh
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELEH 81 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~~ 81 (251)
+.+.++.+|+|++.||..|.++|++|.++.+||+++|.+........ + .....|.+.+..+.++.
T Consensus 106 ~~~~v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~~~~~~--------------~-~~~~~~GDgAaA~ll~~ 170 (325)
T PRK12879 106 AAFDINAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKVTDYTD--------------R-TTCILFGDGAGAVVLEA 170 (325)
T ss_pred cEEEECccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcCCccc--------------c-CceEEEeecceEEEEEe
Confidence 56788999999999999999999999999999999998543221100 0 01112333333332211
Q ss_pred hhhcCCeEE-------------EEEeeeeecCCC---CCCCCCCCC--------hHHHHHHHHHHHHHcCCCCCCccEEE
Q 040515 82 AKKRGAKIY-------------AEVRGYGMSGDA---HHITQPHID--------GKGAILAMTRALKQSGLQSHQVDYVN 137 (251)
Q Consensus 82 A~~~g~~~~-------------a~i~g~~~~~~~---~~~~~~~~~--------~~~~~~a~~~al~~Agi~~~dId~i~ 137 (251)
... +..+. ..+.+.+...+. ........+ ...+..+++++|+++|++++|||+|.
T Consensus 171 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~did~~~ 249 (325)
T PRK12879 171 TEN-EPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTKDDIDWVI 249 (325)
T ss_pred cCC-CCCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 000 00010 011111110000 000000001 12345678999999999999999999
Q ss_pred ecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCC
Q 040515 138 AHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNF 217 (251)
Q Consensus 138 ~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~ 217 (251)
.|-.+... ...+.+.++-... ++.. ....+||+.+|+=.+.+..+ ++.+.
T Consensus 250 ~h~~~~~~-----~~~~~~~lg~~~~--~~~~--~~~~~Gn~~sas~~~~L~~~---~~~g~------------------ 299 (325)
T PRK12879 250 PHQANLRI-----IESLCEKLGIPME--KTLV--SVEYYGNTSAATIPLALDLA---LEQGK------------------ 299 (325)
T ss_pred ECCCCHHH-----HHHHHHHcCCCHH--Hhhh--hHhhhCchHHHHHHHHHHHH---HHcCC------------------
Confidence 99655333 2233343332111 1222 34679999999877666554 33322
Q ss_pred CccccCCCCCCcEEEEecccccceeeeeEee
Q 040515 218 MPLTASKDMPISAALSNSFGFGGTNASLLFT 248 (251)
Q Consensus 218 ~~~~~~~~~~~~~~lv~~~g~gG~~~~~vl~ 248 (251)
..+...+++-++|.|-+..++|++
T Consensus 300 -------~~~Gd~vll~~~G~G~~~~~~l~~ 323 (325)
T PRK12879 300 -------IKPGDTLLLYGFGAGLTWAALLVK 323 (325)
T ss_pred -------CCCCCEEEEEEEchhhhhEEEEEE
Confidence 123456788899998888888876
No 97
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=99.04 E-value=2.4e-09 Score=89.93 Aligned_cols=194 Identities=19% Similarity=0.196 Sum_probs=111.2
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchhh
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELEH 81 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~~ 81 (251)
+.|.+..+|++.++||..|..+|++|.++.+||+|.|.++....+... ..+.-|.+++....++.
T Consensus 105 ~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~ld~~dR---------------~t~vlFgDGAgAvvl~~ 169 (323)
T COG0332 105 PAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRILDWTDR---------------DTCVLFGDGAGAVVLEA 169 (323)
T ss_pred ceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhccCCHhhc---------------cceEEEcCCceEEEEec
Confidence 678999999999999999999999999999999999986444333221 34445555555543322
Q ss_pred hh-hc----------CCe-EEEEEeeeeecC------------CCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 040515 82 AK-KR----------GAK-IYAEVRGYGMSG------------DAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVN 137 (251)
Q Consensus 82 A~-~~----------g~~-~~a~i~g~~~~~------------~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~ 137 (251)
.. +. +.. ..-.+.+....+ +|+.... .....+..+++++|++++++++|||++.
T Consensus 170 ~~~~~~i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk--~av~~~~~~~~~~L~~~~l~~~dId~~v 247 (323)
T COG0332 170 TEDDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFK--FAVRAMPKAIEEVLEKAGLTPEDIDWFV 247 (323)
T ss_pred CCCCcCeeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHH--HHHHHHHHHHHHHHHHcCCCHHHCCEEc
Confidence 21 10 000 000111110000 1100000 0123567889999999999999999999
Q ss_pred ecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCC
Q 040515 138 AHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNF 217 (251)
Q Consensus 138 ~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~ 217 (251)
+|=...+ =.+++.+.++-. . -.+...-..+|++.+||=.+.|.+++ +.+.
T Consensus 248 pHQan~r-----i~~~i~~~l~~~--~--~k~~~~~~~yGNtsaAsiplaL~~~~---~~g~------------------ 297 (323)
T COG0332 248 PHQANLR-----IIEAIAKKLGIP--E--EKVVVTVDKYGNTSAASIPLALDEAL---REGR------------------ 297 (323)
T ss_pred cccccHH-----HHHHHHHHcCCC--H--HHHhhHHHHhcccccchHHHHHHHHh---hhCC------------------
Confidence 9922211 112222222211 0 11112223578888887555554432 3322
Q ss_pred CccccCCCCCCcEEEEecccccceeeeeEeee
Q 040515 218 MPLTASKDMPISAALSNSFGFGGTNASLLFTK 249 (251)
Q Consensus 218 ~~~~~~~~~~~~~~lv~~~g~gG~~~~~vl~~ 249 (251)
-.+....++..||.|=+-.+++++.
T Consensus 298 -------ik~Gd~ill~~fG~Gltwg~~~~r~ 322 (323)
T COG0332 298 -------IKPGDLVLLEAFGGGLTWGAALVRW 322 (323)
T ss_pred -------CCCCCEEEEEeecCcceeeeEEEEe
Confidence 1233677788888877777777753
No 98
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=99.02 E-value=2.3e-09 Score=91.19 Aligned_cols=188 Identities=16% Similarity=0.171 Sum_probs=108.9
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchhh
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELEH 81 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~~ 81 (251)
|+++|+.+|+|++.||..|.++|++|.++.+||+++|.+..... +.. ......|.+.+....++.
T Consensus 103 ~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~---~~~------------~~~~~~~GDgAaA~ll~~ 167 (320)
T cd00830 103 AAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRILD---WTD------------RSTAVLFGDGAGAVVLEA 167 (320)
T ss_pred cEeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhccccC---ccc------------CCceEEEeccceEEEEEe
Confidence 67889999999999999999999999999999999998543321 000 011122333333332221
Q ss_pred hhhcCCeEEEEEeeeeecCCCCC-----CC-------------------CCCC-----ChHHHHHHHHHHHHHcCCCCCC
Q 040515 82 AKKRGAKIYAEVRGYGMSGDAHH-----IT-------------------QPHI-----DGKGAILAMTRALKQSGLQSHQ 132 (251)
Q Consensus 82 A~~~g~~~~a~i~g~~~~~~~~~-----~~-------------------~~~~-----~~~~~~~a~~~al~~Agi~~~d 132 (251)
... +.. |.++...+++.. .. .... ......++++++|+++|++++|
T Consensus 168 ~~~-~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~d 242 (320)
T cd00830 168 TEE-DPG----ILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTPDD 242 (320)
T ss_pred cCC-CCc----EEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCHHH
Confidence 110 111 122222221110 00 0000 0123457889999999999999
Q ss_pred ccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCC
Q 040515 133 VDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPI 212 (251)
Q Consensus 133 Id~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~ 212 (251)
||+|..|..+....+. +.+.++-... .+ ...-..+||+.+|+=.+.|..++ +.+.
T Consensus 243 i~~~~~h~~~~~~~~~-----~~~~lgl~~~--~~--~~~~~~~Gn~~sas~~~~L~~~~---~~~~------------- 297 (320)
T cd00830 243 IDWFVPHQANLRIIEA-----VAKRLGLPEE--KV--VVNLDRYGNTSAASIPLALDEAI---EEGK------------- 297 (320)
T ss_pred CCEEEECCCCHHHHHH-----HHHHhCCCHH--Hh--hhhHHhhCcHHHHHHHHHHHHHH---HcCC-------------
Confidence 9999999776554332 2333332111 12 12334799999999777766553 2222
Q ss_pred CCCCCCccccCCCCCCcEEEEecccccceeeeeE
Q 040515 213 FNDNFMPLTASKDMPISAALSNSFGFGGTNASLL 246 (251)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~lv~~~g~gG~~~~~v 246 (251)
..+...+++.++|.|-+..+++
T Consensus 298 ------------~~~G~~vll~~~G~G~~~~~~l 319 (320)
T cd00830 298 ------------LKKGDLVLLLGFGAGLTWGAAL 319 (320)
T ss_pred ------------CCCCCEEEEEEEchHHhhHHhh
Confidence 1234567777888876655544
No 99
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=98.98 E-value=5.8e-09 Score=89.47 Aligned_cols=205 Identities=20% Similarity=0.157 Sum_probs=112.0
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCC---CcccccccCCCccc
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ---EASRPFDCGRDGFE 78 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~f~~~~~g~~ 78 (251)
+.+.|..+|+|++.||..|..+|++|.++.+||+++|....... ..+. ..........+. .....|.+.+....
T Consensus 115 ~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~GDGA~A~l 191 (338)
T PRK09258 115 ANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESAREIVE-ATID--RLLAPETTREDFAQSFATLTLGSGAAAAV 191 (338)
T ss_pred ceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccchhcc-chhh--hhccCccchhhhhhccceEEecccceEEE
Confidence 46789999999999999999999999999999999998543221 1110 000000000000 00112333333333
Q ss_pred hhhhhhcCCeEEEEEeeeeecCCCCC--CCCC-----CCCh--------HHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q 040515 79 LEHAKKRGAKIYAEVRGYGMSGDAHH--ITQP-----HIDG--------KGAILAMTRALKQSGLQSHQVDYVNAHATST 143 (251)
Q Consensus 79 ~~~A~~~g~~~~a~i~g~~~~~~~~~--~~~~-----~~~~--------~~~~~a~~~al~~Agi~~~dId~i~~h~~gt 143 (251)
++....... ...+.+....+++.. .... ..+. .....+++++|+++|++++|||++..|-.+.
T Consensus 192 l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~~ 269 (338)
T PRK09258 192 LTRGSLHPR--GHRLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQVGA 269 (338)
T ss_pred EecCCCCCC--cceeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCCH
Confidence 322111000 012333222222211 0000 0111 2334578899999999999999999997665
Q ss_pred cCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccC
Q 040515 144 PLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTAS 223 (251)
Q Consensus 144 ~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~ 223 (251)
+..+ .+.+.++-.. ..++. +. ..+||+.+|+=.+.|..++ +.+.
T Consensus 270 ~~~~-----~~~~~lgl~~--~k~~~-~~-~~~GN~~sas~~~~L~~~~---~~g~------------------------ 313 (338)
T PRK09258 270 AHTR-----AILKALGIDP--EKVFT-TF-PTLGNMGPASLPITLAMAA---EEGF------------------------ 313 (338)
T ss_pred HHHH-----HHHHHhCCCH--HHcee-hH-hhhCCcHHhHHHHHHHHHH---HhCC------------------------
Confidence 5433 3333332211 11222 33 3699999998666665543 2222
Q ss_pred CCCCCcEEEEecccccceeeeeEee
Q 040515 224 KDMPISAALSNSFGFGGTNASLLFT 248 (251)
Q Consensus 224 ~~~~~~~~lv~~~g~gG~~~~~vl~ 248 (251)
..+...+++.++|.|-+...++++
T Consensus 314 -~~~Gd~vll~~~G~G~s~~~~~~~ 337 (338)
T PRK09258 314 -LKPGDRVALLGIGSGLNCSMLEVK 337 (338)
T ss_pred -CCCCCEEEEEEechhHhhHhHeee
Confidence 123467888899988777666654
No 100
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=98.97 E-value=3.3e-08 Score=86.05 Aligned_cols=72 Identities=17% Similarity=0.172 Sum_probs=51.0
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhh-hhhcccccCCCCCCcccccccCCCcc
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCK-SRALTTKYNGTPQEASRPFDCGRDGF 77 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~f~~~~~g~ 77 (251)
|++.|+.+|+|++.||..|.++|++|.++.+||+++|.++.......+.. .+.+... +...+.+|+....++
T Consensus 116 ~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 188 (378)
T PRK06816 116 EVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAEL----EENPEIAFEKDFLRW 188 (378)
T ss_pred ceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhcC----cccCCCCCCCCCCCE
Confidence 56889999999999999999999999999999999999766554332221 2222211 223456666666555
No 101
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=98.96 E-value=1.2e-08 Score=87.12 Aligned_cols=189 Identities=15% Similarity=0.182 Sum_probs=106.8
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchhh
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELEH 81 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~~ 81 (251)
|++.|+.+|+|++.||..|.++|++|.++.+||+|+|.++....+... ....-|.+.+.++.++.
T Consensus 103 ~~~~v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~~~~~~~---------------~~~~~fgDga~A~ll~~ 167 (326)
T CHL00203 103 VAFDITAACSGFILALVTATQFIQNGSYKNILVVGADTLSKWIDWSDR---------------KTCILFGDGAGAAIIGA 167 (326)
T ss_pred ceeeecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCcCCcccC---------------CceEEEcceeeEEEEEE
Confidence 568899999999999999999999999999999999985433211100 00112333333332211
Q ss_pred hhhcCCeEEEEEeeeeecCCCC-----------------C-CCCCC-------CC--------hHHHHHHHHHHHHHcCC
Q 040515 82 AKKRGAKIYAEVRGYGMSGDAH-----------------H-ITQPH-------ID--------GKGAILAMTRALKQSGL 128 (251)
Q Consensus 82 A~~~g~~~~a~i~g~~~~~~~~-----------------~-~~~~~-------~~--------~~~~~~a~~~al~~Agi 128 (251)
... ..+ .++...+++. . ...+. .. ......+++++|+++|+
T Consensus 168 ~~~--~~~----~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~ 241 (326)
T CHL00203 168 SYE--NSI----LGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKCLNALNI 241 (326)
T ss_pred cCC--CCe----EEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 000 000 0100000000 0 00000 00 01244578999999999
Q ss_pred CCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCC
Q 040515 129 QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAK 208 (251)
Q Consensus 129 ~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~ 208 (251)
+++|||++..|-.+.... .++.+.++-... .++ ..-..+||+.+|+=.+.|.++ ++.+.+
T Consensus 242 ~~~did~~~~hq~~~~~~-----~~~~~~lgl~~~--k~~--~~l~~~Gn~~sasi~~~L~~~---~~~g~~-------- 301 (326)
T CHL00203 242 SIDEVDWFILHQANKRIL-----EAIANRLSVPNS--KMI--TNLEKYGNTSAASIPLALDEA---IQNNKI-------- 301 (326)
T ss_pred CHHHCCEEEECCCCHHHH-----HHHHHHhCCCHH--Hhh--hHHHhhCcHHHHHHHHHHHHH---HHhCCC--------
Confidence 999999999996664432 223333331111 122 123578999998866665544 333321
Q ss_pred CCCCCCCCCCccccCCCCCCcEEEEecccccceeeeeEee
Q 040515 209 PDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 248 (251)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~lv~~~g~gG~~~~~vl~ 248 (251)
.+.+.+++.++|.|=+..++|++
T Consensus 302 -----------------~~Gd~vll~~~G~G~s~~~~v~~ 324 (326)
T CHL00203 302 -----------------QPGQIIVLSGFGAGLTWGAIVLK 324 (326)
T ss_pred -----------------CCCCEEEEEEEchhhhheEEEEE
Confidence 23467777788888777777765
No 102
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=98.94 E-value=1.4e-08 Score=88.48 Aligned_cols=191 Identities=17% Similarity=0.176 Sum_probs=108.0
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchhh
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELEH 81 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~~ 81 (251)
|++.|+.+|+|++.||..|.++|++|.++.+||+++|.+.....+... ....-|.+.+..+.++.
T Consensus 148 ~~~dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~~~~~d~---------------~~~~lfGDGAaAvlL~~ 212 (379)
T PLN02326 148 LAFDLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSRYVDWTDR---------------GTCILFGDGAGAVVLQA 212 (379)
T ss_pred ceeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcCCCCcccc---------------CceEEEcceeEEEEEEE
Confidence 568899999999999999999999999999999999985432211100 01112333333322211
Q ss_pred hhhcCCeEEEEEeeeeecCCC------------C-----------CCCC---------CCCC--------hHHHHHHHHH
Q 040515 82 AKKRGAKIYAEVRGYGMSGDA------------H-----------HITQ---------PHID--------GKGAILAMTR 121 (251)
Q Consensus 82 A~~~g~~~~a~i~g~~~~~~~------------~-----------~~~~---------~~~~--------~~~~~~a~~~ 121 (251)
.......+ .++...+++ . .... .... ...+.+++++
T Consensus 213 ~~~~~~~i----~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~ 288 (379)
T PLN02326 213 CDDDEDGL----LGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIES 288 (379)
T ss_pred cCCCCCce----EEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHHH
Confidence 00000000 000000000 0 0000 0000 1123467889
Q ss_pred HHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCcc
Q 040515 122 ALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAP 201 (251)
Q Consensus 122 al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip 201 (251)
+|+++|++++|||+|..|-.+....| .+.+.++-.. ..++ .+. ..+||+.+|+=.+.|.+++ +.+.
T Consensus 289 ~L~~~gl~~~dId~~v~Hq~n~~~~~-----~~~~~Lgl~~--ek~~-~~l-~~~GNt~sAsi~~~L~~~~---~~g~-- 354 (379)
T PLN02326 289 ALQKAGLTAESIDWLLLHQANQRIID-----AVAQRLGIPP--EKVI-SNL-ANYGNTSAASIPLALDEAV---RSGK-- 354 (379)
T ss_pred HHHHcCCCHHHCCEEEECCCCHHHHH-----HHHHHcCCCH--HHee-ecH-hhcCcHHHHHHHHHHHHHH---HcCC--
Confidence 99999999999999999965544322 2333332111 1132 233 5799999998666655442 2222
Q ss_pred CcCCCCCCCCCCCCCCCccccCCCCCCcEEEEecccccceeeeeEee
Q 040515 202 LTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 248 (251)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~g~gG~~~~~vl~ 248 (251)
..+.+.+++.+||.|-+..++||+
T Consensus 355 -----------------------~~~Gd~vll~~~G~G~t~~~~ll~ 378 (379)
T PLN02326 355 -----------------------VKKGDVIATAGFGAGLTWGSAIVR 378 (379)
T ss_pred -----------------------CCCCCEEEEEEEChhheeeEEEEE
Confidence 123467888899998888888875
No 103
>PRK06840 hypothetical protein; Validated
Probab=98.83 E-value=4.2e-08 Score=84.22 Aligned_cols=190 Identities=15% Similarity=0.124 Sum_probs=105.7
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHh-CCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcc-cccccCCCccch
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQF-GDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS-RPFDCGRDGFEL 79 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~-G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~f~~~~~g~~~ 79 (251)
+++.|..+|++++.||..|.++|++ |.++.+||++.|.......+.. +.... ..|.+.+....+
T Consensus 107 ~~~~v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~~~~~~~--------------~~~~~~~~~GDgAaA~ll 172 (339)
T PRK06840 107 WAFDIMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNSDLVDYDN--------------PRTRFMFNFAAGGSAALL 172 (339)
T ss_pred ccccccccchHHHHHHHHHHHHHhcCCCccEEEEEeecccccccCcCC--------------CCeeeeccCCCceeEEEE
Confidence 4677899999999999999999999 9999999999887433211100 00000 012333333222
Q ss_pred hhhhhcCCeEEEEEeeeeecCCC------------CC-C----C---------CCCCC----------hHHHHHHHHHHH
Q 040515 80 EHAKKRGAKIYAEVRGYGMSGDA------------HH-I----T---------QPHID----------GKGAILAMTRAL 123 (251)
Q Consensus 80 ~~A~~~g~~~~a~i~g~~~~~~~------------~~-~----~---------~~~~~----------~~~~~~a~~~al 123 (251)
+.. ..+.. |.+....+++ .. . . ...+. .....++++++|
T Consensus 173 ~~~-~~~~~----il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L 247 (339)
T PRK06840 173 KKD-AGKNR----ILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIREAL 247 (339)
T ss_pred Eec-CCCCc----eEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHHHHH
Confidence 110 00011 1111111111 00 0 0 00000 113457889999
Q ss_pred HHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCc
Q 040515 124 KQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLT 203 (251)
Q Consensus 124 ~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~ 203 (251)
+++|++++|||++..|-.+... ...+.+.++-... +.. ....+||+.+|+=++.|..++ +.+.
T Consensus 248 ~~~gl~~~did~~~~h~~~~~~-----~~~~~~~Lgl~~~--~~~---~~~~~Gn~~sas~~~~L~~~~---~~~~---- 310 (339)
T PRK06840 248 RKSGYTPKDIDYLAILHMKRSA-----HIALLEGLGLTEE--QAI---YLDEYGHLGQLDQILSLHLAL---EQGK---- 310 (339)
T ss_pred HHcCCCHHHCCEEEECCcCHHH-----HHHHHHHcCCCHH--HeE---eHHhccchhhhhHHHHHHHHH---HcCC----
Confidence 9999999999999887443222 1223333321111 122 235789999988666655442 2221
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCcEEEEecccccceeeeeEee
Q 040515 204 LNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 248 (251)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~g~gG~~~~~vl~ 248 (251)
..+...+++.++|.|.+..+++|+
T Consensus 311 ---------------------~~~Gd~ill~~~G~G~s~~~~~l~ 334 (339)
T PRK06840 311 ---------------------LKDGDLVVLVSAGTGYTWAATVIR 334 (339)
T ss_pred ---------------------CCCCCEEEEEEEehhhheeEEEEE
Confidence 123467888899999998888886
No 104
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=98.75 E-value=4.7e-07 Score=77.91 Aligned_cols=187 Identities=14% Similarity=0.115 Sum_probs=104.0
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchhh
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELEH 81 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~~ 81 (251)
+.+.|..+|+++..||..|..+|++|.++.+||++.|.+..... +.....|...+....++.
T Consensus 104 ~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~~~~------------------~~~~~~~GDGAaA~vl~~ 165 (345)
T TIGR00748 104 TAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQGAPG------------------DALEYTAGAGGAAYIIGE 165 (345)
T ss_pred eEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCC------------------ccCcccCCCceEEEEEcc
Confidence 46788999999999999999999999999999999998531100 000001111111111111
Q ss_pred hhhcCCeEEEEEeeee-ecCCCCC------------CCCCCC---ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcC
Q 040515 82 AKKRGAKIYAEVRGYG-MSGDAHH------------ITQPHI---DGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 145 (251)
Q Consensus 82 A~~~g~~~~a~i~g~~-~~~~~~~------------~~~~~~---~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~ 145 (251)
. . ....+.+.. ...|+.. ...... -......+++++|+++|++++|||++..|-.+...
T Consensus 166 ~----~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~~~ 240 (345)
T TIGR00748 166 K----N-TVAYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNGKF 240 (345)
T ss_pred C----C-cceEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCChHH
Confidence 0 0 001111110 0011000 000000 11233477889999999999999999999544332
Q ss_pred CcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCC
Q 040515 146 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 225 (251)
Q Consensus 146 ~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~ 225 (251)
...+.+.++-.. ...+.+-.-..+||+.+||=.+.|..++..+
T Consensus 241 -----~~~~~~~lgl~~--ek~~~~~~~~~~GNt~sAsipl~L~~~~~~~------------------------------ 283 (345)
T TIGR00748 241 -----YLVAARMLGFPK--EQVKPGLLTPRIGNTYSGATPVGLSAVLDIA------------------------------ 283 (345)
T ss_pred -----HHHHHHHcCCCH--HHeeccccccccCchhhhHHHHHHHHHHHhc------------------------------
Confidence 112223332111 1122211125799999999777776654211
Q ss_pred CCCcEEEEecccccceeeeeEee
Q 040515 226 MPISAALSNSFGFGGTNASLLFT 248 (251)
Q Consensus 226 ~~~~~~lv~~~g~gG~~~~~vl~ 248 (251)
.+.+.+++.+||.|-+...++++
T Consensus 284 ~~Gd~vll~~~G~G~s~~~~~~~ 306 (345)
T TIGR00748 284 EPGDRILAVSYGSGAGSDAFSIV 306 (345)
T ss_pred CCCCEEEEEEecCCcceeEEEEE
Confidence 12346777889988888888774
No 105
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=98.73 E-value=3.9e-08 Score=83.82 Aligned_cols=43 Identities=16% Similarity=0.180 Sum_probs=39.3
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChh
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL 44 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~ 44 (251)
|+++|+.+|+|++.||..|.++|++|.++.+||+++|.+....
T Consensus 101 ~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~ 143 (324)
T cd00827 101 EAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLL 143 (324)
T ss_pred ceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhcc
Confidence 6788999999999999999999999999999999999865444
No 106
>PRK04262 hypothetical protein; Provisional
Probab=98.67 E-value=5.5e-07 Score=77.59 Aligned_cols=187 Identities=17% Similarity=0.171 Sum_probs=104.0
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchhh
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELEH 81 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~~ 81 (251)
+.+.++.+|++++.+|..|..+|++|.++.+||++.|.....+. .. ....|.+.+....++.
T Consensus 105 ~~~dv~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~~~~-------~~-----------~~~~~GDGA~A~ll~~ 166 (347)
T PRK04262 105 TAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQGAPG-------DA-----------LEYTAAAGGAAFIIGK 166 (347)
T ss_pred eEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeeccCCC-------CC-----------CCCcCCCCcEEEEEec
Confidence 35778999999999999999999999999999999997311000 00 0001111111111111
Q ss_pred hhhcCCeEEEEEeeee-ecCCCCCC--------C----CCC---CChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcC
Q 040515 82 AKKRGAKIYAEVRGYG-MSGDAHHI--------T----QPH---IDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 145 (251)
Q Consensus 82 A~~~g~~~~a~i~g~~-~~~~~~~~--------~----~~~---~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~ 145 (251)
.. ....|.+.. ...+.... . ... ........+++++|+++|++++|||++..|-.+...
T Consensus 167 --~~---~~~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~ 241 (347)
T PRK04262 167 --EE---VIAEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAVFHQPNGKF 241 (347)
T ss_pred --Cc---ccceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceeecCCCchHH
Confidence 00 001122111 00111000 0 000 011356678899999999999999999999544443
Q ss_pred CcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccCcCCCCCCCCCCCCCCCccccCCC
Q 040515 146 GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPLTLNLAKPDPIFNDNFMPLTASKD 225 (251)
Q Consensus 146 ~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~ 225 (251)
.+. +.+.++-.. ..++.+..-..+||+.+|+=.+.+..++. . .
T Consensus 242 ~~~-----~~~~Lgl~~--ek~~~~~~~~~~GNt~sAsi~~~L~~~~~---~-~-------------------------- 284 (347)
T PRK04262 242 PLR-----VAKMLGFTK--EQVKPGLLTPYIGNTYSGSALLGLAAVLD---V-A-------------------------- 284 (347)
T ss_pred HHH-----HHHHcCCCH--HHhhccchhhhhCChHHHHHHHHHHHHHH---h-C--------------------------
Confidence 222 222222111 11222212367999999997766655431 1 0
Q ss_pred CCCcEEEEecccccceeeeeEee
Q 040515 226 MPISAALSNSFGFGGTNASLLFT 248 (251)
Q Consensus 226 ~~~~~~lv~~~g~gG~~~~~vl~ 248 (251)
.+...+++.+||.|-+...++++
T Consensus 285 ~~Gd~vll~~~G~G~~~~~~~~~ 307 (347)
T PRK04262 285 KPGDRILVVSFGSGAGSDAFSIT 307 (347)
T ss_pred CCCCEEEEEecCCCcceeeEEEE
Confidence 12356788888888777666664
No 107
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.53 E-value=1.3e-06 Score=74.55 Aligned_cols=39 Identities=10% Similarity=-0.032 Sum_probs=34.5
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCc
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 41 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~ 41 (251)
+++.|..+|++++.||..|..+|+++. +.+||+++|...
T Consensus 105 ~~~di~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~~s 143 (326)
T PRK05963 105 GAIDLAGACAGFLYALVLADGFVRAQG-KPVLVVAANILS 143 (326)
T ss_pred ceeeccchhhHHHHHHHHHHHHHHcCC-CeEEEEEechhh
Confidence 467888999999999999999999985 899999999743
No 108
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.46 E-value=1.4e-07 Score=78.05 Aligned_cols=43 Identities=37% Similarity=0.540 Sum_probs=38.6
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChh
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL 44 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~ 44 (251)
|.++|+..|+||+.||.+|+++|++|++|++||+|+|++++.+
T Consensus 80 p~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p 122 (264)
T PF00108_consen 80 PATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVP 122 (264)
T ss_dssp EEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSC
T ss_pred ceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEeccccccccc
Confidence 7899999999999999999999999999999999999987654
No 109
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=98.33 E-value=1.8e-05 Score=68.99 Aligned_cols=38 Identities=8% Similarity=0.112 Sum_probs=35.6
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCC
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTES 39 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~ 39 (251)
+++.+..+|++++.||..|..+|++|..+.+||+++|.
T Consensus 101 ~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~ 138 (379)
T TIGR01835 101 RSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDI 138 (379)
T ss_pred eEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeeh
Confidence 46778999999999999999999999999999999997
No 110
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=98.25 E-value=3.3e-06 Score=73.14 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=36.2
Q ss_pred eeecc-hhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcC
Q 040515 3 NHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSID 42 (251)
Q Consensus 3 ~~tv~-~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~ 42 (251)
++.|. .+|++++.||..|..+|++|..+.+||+++|..+.
T Consensus 139 ~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s~ 179 (361)
T cd00831 139 RYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSL 179 (361)
T ss_pred hhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeecccc
Confidence 56787 89999999999999999999999999999998544
No 111
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=98.19 E-value=1.3e-05 Score=67.11 Aligned_cols=143 Identities=17% Similarity=0.204 Sum_probs=88.0
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchhh
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELEH 81 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~~ 81 (251)
|.+.|+++|+|++.||..|..+|++|.+|.+||++.|...+......+ .......+| ..+.-|..++..+.++.
T Consensus 97 P~fdV~~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErqfr~-----p~eyg~q~~-~ta~~tgdGAGA~vl~~ 170 (327)
T TIGR02845 97 PFLGLYGACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQFRY-----PTEYGVQKP-PTAQWTVTGAGAVLLAS 170 (327)
T ss_pred CEEEEeccCHHHHHHHHHHHHHHhCCCCCEEEEEEecccchhhhhccc-----ccccccCCC-CeeeEEEcccEEEEEee
Confidence 678999999999999999999999999999999999875544322111 100000011 23334555655554433
Q ss_pred hhhcCCeE----EEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 82 AKKRGAKI----YAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 82 A~~~g~~~----~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
. ..+.++ .+.|..+++. |...+. ..+.++....+.+=|++-|.+|+|-|.|..-+.|.. -...+..+
T Consensus 171 ~-~~~~~i~~~t~gkv~d~g~~-d~~nmg--aamapaa~dti~~h~~d~~~~~~~yd~i~tgdlg~v-----g~~i~~~l 241 (327)
T TIGR02845 171 T-GGGPRITSATIGKVVDYGIT-DPLDMG--AAMAPAAADTIEAHFKDTGRSVDDYDLIVTGDLARV-----GSEILRKL 241 (327)
T ss_pred c-CCCCceEEEEEEEEEecCCC-Ccccch--hhhhHHHHHHHHHHHHHcCCChhhccEEEecchHHH-----HHHHHHHH
Confidence 2 122222 1444444442 221111 112345667788889999999999999999876643 33445555
Q ss_pred hh
Q 040515 158 FS 159 (251)
Q Consensus 158 ~~ 159 (251)
+.
T Consensus 242 l~ 243 (327)
T TIGR02845 242 LK 243 (327)
T ss_pred HH
Confidence 53
No 112
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=98.13 E-value=3.3e-05 Score=66.70 Aligned_cols=39 Identities=18% Similarity=0.024 Sum_probs=34.7
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCc
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 41 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~ 41 (251)
+++.|..+|++++.+|..|..+|++|..+ +||++.|..+
T Consensus 114 ~~~di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S 152 (353)
T PRK12880 114 IAFDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLS 152 (353)
T ss_pred eEEehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhh
Confidence 35788999999999999999999999999 8888888743
No 113
>PLN03172 chalcone synthase family protein; Provisional
Probab=97.98 E-value=0.00014 Score=63.72 Aligned_cols=208 Identities=12% Similarity=0.082 Sum_probs=107.7
Q ss_pred eecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchhhhh
Q 040515 4 HAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELEHAK 83 (251)
Q Consensus 4 ~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~~A~ 83 (251)
+.+..+|++++.+|..|..+++++....+||+++|.++.............+ ....-|.+++....++...
T Consensus 158 ~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~---------v~~~LFGDGAaAvVl~~~~ 228 (393)
T PLN03172 158 MMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSL---------VGQALFGDGAAAVIIGADP 228 (393)
T ss_pred eeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhh---------hccchhcCceEEEEEecCC
Confidence 4568999999999999999999999999999999985421100000000000 0122344443333222100
Q ss_pred hcC-CeEEEEEeeee----ecCC----------CCC--CC--CCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCc
Q 040515 84 KRG-AKIYAEVRGYG----MSGD----------AHH--IT--QPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 144 (251)
Q Consensus 84 ~~g-~~~~a~i~g~~----~~~~----------~~~--~~--~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~ 144 (251)
..+ .++.-.|.+.. ..++ |.. +. .|......+...+++.|++.|+++.||++|-+|--|-.
T Consensus 229 ~~~~~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqgg~~ 308 (393)
T PLN03172 229 DTKIERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGGPA 308 (393)
T ss_pred CCcccCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCccccceEEecCCcHH
Confidence 000 01111222221 1111 110 00 01111245567788899999999999999999955544
Q ss_pred CCcHHHHHHHHHHhhccCCCCceee-ecccCCccchhhhhhHHHHHHHHHH-HhhCCccCcCCCCCCCCCCCCCCCcccc
Q 040515 145 LGDTVEATAIRTVFSDHATSGSLAF-SSTKGAIGHLLGAAGAVEAIFAVLT-IHHGVAPLTLNLAKPDPIFNDNFMPLTA 222 (251)
Q Consensus 145 ~~D~~E~~a~~~~~~~~~~~~~~~v-~~~k~~~Gh~~~AsG~~~l~~~~~~-l~~~~ip~~~~~~~~~~~~~~~~~~~~~ 222 (251)
. ..++.+.++-...+ +.. ..+-..+|++.+||=++-|-+.... ++.+.
T Consensus 309 I-----l~~v~~~Lgl~~~~--~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~----------------------- 358 (393)
T PLN03172 309 I-----LDQVEIKLDLKEEK--LRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGK----------------------- 358 (393)
T ss_pred H-----HHHHHHHcCCCHHH--HHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCC-----------------------
Confidence 3 33344433321111 110 0122357888877733333322110 11111
Q ss_pred CCC-CCCcEEEEecccccceeeeeEeeec
Q 040515 223 SKD-MPISAALSNSFGFGGTNASLLFTKC 250 (251)
Q Consensus 223 ~~~-~~~~~~lv~~~g~gG~~~~~vl~~~ 250 (251)
.+. .+..+++..+||.|=+...++|+..
T Consensus 359 ~~~G~~~~~~ll~afGpG~t~~~~ll~~~ 387 (393)
T PLN03172 359 GSTGEGLEWGVLFGFGPGLTVETVVLHSV 387 (393)
T ss_pred CCCCCCcceEEEEEeCCcceeeeeeeEec
Confidence 001 1225788889999988888988863
No 114
>PRK08304 stage V sporulation protein AD; Validated
Probab=97.94 E-value=8.1e-05 Score=62.56 Aligned_cols=143 Identities=17% Similarity=0.189 Sum_probs=83.8
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchhh
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELEH 81 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~~ 81 (251)
|.+.|+++|+|+..||..|..+|++|.+|.+||++.+.+.+....+.|- .+.....|. ...-+...+..+.++.
T Consensus 103 Pa~dV~gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerqfr~P-----~eyg~qrp~-taqwtvtGAGA~i~~~ 176 (337)
T PRK08304 103 PFLGLYGACSTMMESLALGSMLIDGGFADRVLAATSSHFATAERQFRFP-----TEYGGQRPP-TAQWTVTGAGAVLLSR 176 (337)
T ss_pred cEEEEeccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhhccCc-----hhccccCCC-cceEEeeccEEEEEec
Confidence 7889999999999999999999999999999999999865553222110 000001111 1111222333332221
Q ss_pred hhhcCCeE----EEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 82 AKKRGAKI----YAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 82 A~~~g~~~----~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
. ..+.++ .+.|..+++. |...+. ..+.++....+.+=|++-|.+|+|-|.|..-+.|.. -...+.++
T Consensus 177 ~-~~~~~i~~~t~Gkv~D~g~~-d~~nmg--aaMapAa~dti~~h~~d~~~~~~~yDli~tGDlg~v-----G~~i~~~l 247 (337)
T PRK08304 177 E-GSGPRITHATIGKVVDLGIK-DPNDMG--AAMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLGRV-----GREILKEL 247 (337)
T ss_pred C-CCCceEEEEeEEEEEecCCC-Ccccch--hhhhHHHHHHHHHHHHHcCCChhhccEEEEcchHHH-----HHHHHHHH
Confidence 1 111111 1334444432 211111 122445667788889999999999999999876643 33445555
Q ss_pred hh
Q 040515 158 FS 159 (251)
Q Consensus 158 ~~ 159 (251)
+.
T Consensus 248 l~ 249 (337)
T PRK08304 248 LK 249 (337)
T ss_pred HH
Confidence 53
No 115
>PLN03169 chalcone synthase family protein; Provisional
Probab=97.93 E-value=3e-05 Score=67.86 Aligned_cols=38 Identities=11% Similarity=0.158 Sum_probs=35.2
Q ss_pred eeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCC
Q 040515 3 NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESS 40 (251)
Q Consensus 3 ~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~ 40 (251)
.+.+..+|++++.+|..|..+|++|..+.+||+++|..
T Consensus 161 ~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~ 198 (391)
T PLN03169 161 VMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETT 198 (391)
T ss_pred eecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcC
Confidence 46778999999999999999999999999999999984
No 116
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=97.90 E-value=0.00038 Score=59.49 Aligned_cols=160 Identities=17% Similarity=0.154 Sum_probs=94.8
Q ss_pred ecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchhhhhh
Q 040515 5 AAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELEHAKK 84 (251)
Q Consensus 5 tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~~A~~ 84 (251)
-+..+|-+|..||+.|..+|.+|..+-+||+|.|........ . .-+..++.+... ...
T Consensus 108 d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~~~~-------~-------------~E~t~GAGavA~--lIg 165 (377)
T COG3425 108 DVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYAPGD-------A-------------LEYTAGAGAVAF--LIG 165 (377)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccCCCc-------c-------------cCccCCCceEEE--EEc
Confidence 366799999999999999999999999999999973222110 0 001112222100 011
Q ss_pred cCCeEEEEEeeeeecC-CCCCCCC----CCC--C--------hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHH
Q 040515 85 RGAKIYAEVRGYGMSG-DAHHITQ----PHI--D--------GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTV 149 (251)
Q Consensus 85 ~g~~~~a~i~g~~~~~-~~~~~~~----~~~--~--------~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~ 149 (251)
.+..+.+.+.+..... |-..... +.| . ...+..+.+..+++.|++|+|.||+..|-+...+
T Consensus 166 ~n~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k~---- 241 (377)
T COG3425 166 KNPPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGKF---- 241 (377)
T ss_pred cCCCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCch----
Confidence 1123334443433222 1111000 111 1 2356678888899999999999999999877765
Q ss_pred HHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHH
Q 040515 150 EATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAV 192 (251)
Q Consensus 150 E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~ 192 (251)
-..++..+.-... + -.|=-.....+|.+..+|..++|+.++
T Consensus 242 ~~ka~k~l~~~~e-~-v~~~l~~~~~vGN~YtgS~~L~Las~L 282 (377)
T COG3425 242 PKKAAKSLGFKEE-Q-VKPGLVYPQRIGNTYTGSLLLGLASLL 282 (377)
T ss_pred HHHHHHHhCccHh-h-cCccchhhhhcCcccchhHHHHHHHHH
Confidence 5555555532211 0 011112223689999999999888876
No 117
>PLN03171 chalcone synthase-like protein; Provisional
Probab=97.84 E-value=0.00013 Score=64.05 Aligned_cols=38 Identities=13% Similarity=0.215 Sum_probs=34.3
Q ss_pred eecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCc
Q 040515 4 HAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 41 (251)
Q Consensus 4 ~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~ 41 (251)
+.+..+|++++.+|..|..+|++|..+.+||+++|..+
T Consensus 164 ~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s 201 (399)
T PLN03171 164 MLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITL 201 (399)
T ss_pred eccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEeccc
Confidence 45567999999999999999999999999999999844
No 118
>PLN03170 chalcone synthase; Provisional
Probab=97.78 E-value=0.00013 Score=63.94 Aligned_cols=210 Identities=10% Similarity=0.049 Sum_probs=106.7
Q ss_pred eeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCccchhhh
Q 040515 3 NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFELEHA 82 (251)
Q Consensus 3 ~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~~~~~A 82 (251)
.+.+..+|++++.+|..|.++++++....+||+++|..+..+..........+ ....-|.+++....++..
T Consensus 161 ~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~---------~~~~LFGDGAaAvVl~~~ 231 (401)
T PLN03170 161 LMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSM---------VGQALFGDGAAAVIVGAD 231 (401)
T ss_pred HHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhh---------hhhhhhhceeEEEEEecC
Confidence 46788999999999999999999999999999999985422100000000000 011123222222211100
Q ss_pred hhcC-CeEEEEEee--------------eeecCCCCCCC----CCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q 040515 83 KKRG-AKIYAEVRG--------------YGMSGDAHHIT----QPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATST 143 (251)
Q Consensus 83 ~~~g-~~~~a~i~g--------------~~~~~~~~~~~----~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt 143 (251)
...+ ..+...+.+ +.+...|.... .|......+...++++|+++|++++||+++.+|--|.
T Consensus 232 ~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqgg~ 311 (401)
T PLN03170 232 PDERVERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGP 311 (401)
T ss_pred CcccccCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEecCCcH
Confidence 0000 000001111 01111111000 0111224566788999999999999999999995443
Q ss_pred cCCcHHHHHHHHHHhhccCCCCcee-eecccCCccchhhhhhHHHHHHHHHH-HhhCCccCcCCCCCCCCCCCCCCCccc
Q 040515 144 PLGDTVEATAIRTVFSDHATSGSLA-FSSTKGAIGHLLGAAGAVEAIFAVLT-IHHGVAPLTLNLAKPDPIFNDNFMPLT 221 (251)
Q Consensus 144 ~~~D~~E~~a~~~~~~~~~~~~~~~-v~~~k~~~Gh~~~AsG~~~l~~~~~~-l~~~~ip~~~~~~~~~~~~~~~~~~~~ 221 (251)
.. ..++.+.++-... .+. -..+-..+||+.+++=++-|-+.... ++.+.+.
T Consensus 312 ~i-----l~~v~~~Lgl~~~--~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~-------------------- 364 (401)
T PLN03170 312 AI-----LDQVEAKVGLEKE--RMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQAT-------------------- 364 (401)
T ss_pred HH-----HHHHHHHcCCChH--HHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCC--------------------
Confidence 32 3333333321110 011 00122368899888755444443211 1122110
Q ss_pred cCCCCCCcEEEEecccccceeeeeEeeec
Q 040515 222 ASKDMPISAALSNSFGFGGTNASLLFTKC 250 (251)
Q Consensus 222 ~~~~~~~~~~lv~~~g~gG~~~~~vl~~~ 250 (251)
.......+++.+||.|=+...+||+++
T Consensus 365 --~G~~~~~~ll~afGpG~t~~~~ll~~~ 391 (401)
T PLN03170 365 --TGEGFDWGVLFGFGPGLTVETVVLHSV 391 (401)
T ss_pred --CCCCccEEEEEEeCchHhHHhHHheec
Confidence 001125678889998888888888763
No 119
>PLN02854 3-ketoacyl-CoA synthase
Probab=97.74 E-value=0.00038 Score=62.55 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=35.8
Q ss_pred eeecc-hhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCc
Q 040515 3 NHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 41 (251)
Q Consensus 3 ~~tv~-~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~ 41 (251)
++.++ .+|++++.+|..|.++|+.+....+||+++|..+
T Consensus 242 afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S 281 (521)
T PLN02854 242 SYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENIT 281 (521)
T ss_pred EEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeee
Confidence 56677 7999999999999999999999999999999854
No 120
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=97.74 E-value=0.00014 Score=49.75 Aligned_cols=89 Identities=18% Similarity=0.215 Sum_probs=53.0
Q ss_pred HHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHhhCCccC
Q 040515 123 LKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAPL 202 (251)
Q Consensus 123 l~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~ 202 (251)
|+++|++++|||++..|-..... ...+.+.++-... ..+ ... ..+||+.+|+-.+.+..++ +.+.
T Consensus 1 L~~~g~~~~did~~i~hq~~~~~-----~~~~~~~lgi~~~--~~~-~~~-~~~Gn~~sa~~~~~L~~~~---~~g~--- 65 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKKI-----LDSIAKRLGIPPE--RFP-DNL-AEYGNTGSASIPINLADAL---EEGR--- 65 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHHH-----HHHHHHHHTS-GG--GBE--TH-HHH-B-GGGHHHHHHHHHH---HTTS---
T ss_pred CccccCCHHHCCEEEeCCCCHHH-----HHHHHHHcCCcHH--HHH-HHH-hccCcchhhhHHHHHHHHH---HcCC---
Confidence 68999999999999999555332 2223333332111 122 223 6789999999777765543 3322
Q ss_pred cCCCCCCCCCCCCCCCccccCCCCCCcEEEEecccccceeeeeEee
Q 040515 203 TLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFT 248 (251)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~g~gG~~~~~vl~ 248 (251)
..+...+++.++|.|.+.++++++
T Consensus 66 ----------------------~~~Gd~vl~~~~G~G~~~~~~~~~ 89 (90)
T PF08541_consen 66 ----------------------IKPGDRVLLVGFGAGFSWGAAVLR 89 (90)
T ss_dssp ----------------------SCTTEEEEEEEEETTTEEEEEEEE
T ss_pred ----------------------CCCCCEEEEEEEEhhheeEEEEEE
Confidence 234567888899999999988876
No 121
>PLN03173 chalcone synthase; Provisional
Probab=97.61 E-value=0.00015 Score=63.41 Aligned_cols=38 Identities=11% Similarity=0.105 Sum_probs=34.9
Q ss_pred eecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCc
Q 040515 4 HAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 41 (251)
Q Consensus 4 ~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~ 41 (251)
+.+..+|++++.+|..|.++++++..+.+||+++|.++
T Consensus 158 ~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S 195 (391)
T PLN03173 158 MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITA 195 (391)
T ss_pred ehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhh
Confidence 45789999999999999999999999999999999844
No 122
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=97.51 E-value=0.00014 Score=48.75 Aligned_cols=39 Identities=21% Similarity=0.170 Sum_probs=34.0
Q ss_pred eecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcC
Q 040515 4 HAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID 42 (251)
Q Consensus 4 ~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~ 42 (251)
|.|+.+|++.+.||..|..+|++|.++.+||++.|....
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~ 39 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR 39 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc
Confidence 568899999999999999999999999999999998544
No 123
>PRK12404 stage V sporulation protein AD; Provisional
Probab=97.48 E-value=0.0021 Score=53.94 Aligned_cols=139 Identities=14% Similarity=0.232 Sum_probs=81.6
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCccccccc----CCCc-
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC----GRDG- 76 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~----~~~g- 76 (251)
|.+.|.++|+|+..||..|..+|++|.+|.+||+......+....+.| -.+. +..||... ...|
T Consensus 101 P~~gV~gACSTg~eAL~lAa~~VaSG~Ad~VLavtsSH~~~aErqfR~-----P~ey------G~Qrp~taqwTvTgaga 169 (334)
T PRK12404 101 PYLGLFGACSTSMEGLALAALIVNSGGAKYVLTGASSHNAAVEKQFRY-----PTEY------GGQKPPTAQWTVTGAGA 169 (334)
T ss_pred CccceeecCHHHHHHHHHHHHHHHcCCCCEEEEEeCcccchhhhhccC-----cccc------cCcCCCcccEEEEceEE
Confidence 678899999999999999999999999999999987664443322211 1111 12222211 1111
Q ss_pred cchhhhhhcCCeE----EEEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHH
Q 040515 77 FELEHAKKRGAKI----YAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEAT 152 (251)
Q Consensus 77 ~~~~~A~~~g~~~----~a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~ 152 (251)
+.+... ..+.++ .+.|..+++. |...+. ..+.++....+.+=|++-|.+|+|-|.|..-+.|.. -..
T Consensus 170 ~~l~~~-~~~~~i~~~T~Gkv~D~g~~-d~~nMG--aaMAPAA~dti~~h~~d~~~~~~~yDlI~TGDLg~v-----G~~ 240 (334)
T PRK12404 170 AILSKT-GDGPRVTSATIGRVVDMGLT-DPFNMG--GAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLGHV-----GRE 240 (334)
T ss_pred EEEecC-CCCceEEEEEEEEEEecCCC-Ccccch--hhhhHHHHHHHHHHHHHhCCChhhccEEEEcchHHH-----HHH
Confidence 122110 111111 1334444432 211111 112345667788889999999999999999876643 344
Q ss_pred HHHHHhhc
Q 040515 153 AIRTVFSD 160 (251)
Q Consensus 153 a~~~~~~~ 160 (251)
.+..++.+
T Consensus 241 i~~~ll~~ 248 (334)
T PRK12404 241 IAKDLLHK 248 (334)
T ss_pred HHHHHHHH
Confidence 45555543
No 124
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=97.29 E-value=0.0015 Score=58.14 Aligned_cols=39 Identities=10% Similarity=0.158 Sum_probs=35.3
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCc--CEEEEeCcCCC
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDS--DVMVAGGTESS 40 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~--d~alvgg~e~~ 40 (251)
+++-+..+|.++..||..|..+|++|.. +.+||+++|..
T Consensus 109 ~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a 149 (459)
T PLN02577 109 EGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSA 149 (459)
T ss_pred EEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechh
Confidence 3677899999999999999999999985 99999999973
No 125
>PLN03168 chalcone synthase; Provisional
Probab=97.27 E-value=0.0012 Score=57.79 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=36.3
Q ss_pred eeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCc
Q 040515 3 NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 41 (251)
Q Consensus 3 ~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~ 41 (251)
++.+..+|++++.+|..|..+|++|....|||+++|.++
T Consensus 156 ~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~S 194 (389)
T PLN03168 156 VMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTA 194 (389)
T ss_pred eeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehhh
Confidence 577899999999999999999999999999999999854
No 126
>PLN02377 3-ketoacyl-CoA synthase
Probab=97.22 E-value=0.003 Score=56.75 Aligned_cols=39 Identities=21% Similarity=0.242 Sum_probs=36.0
Q ss_pred eeecc-hhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCc
Q 040515 3 NHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 41 (251)
Q Consensus 3 ~~tv~-~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~ 41 (251)
++.++ .+|++++.+|..|.++|+.+....+||+++|..+
T Consensus 226 afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S 265 (502)
T PLN02377 226 SFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENIT 265 (502)
T ss_pred EEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEeccc
Confidence 57788 6999999999999999999999999999999854
No 127
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.38 E-value=0.14 Score=42.73 Aligned_cols=130 Identities=15% Similarity=0.170 Sum_probs=76.8
Q ss_pred chhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccccccCCCcc---------
Q 040515 7 VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF--------- 77 (251)
Q Consensus 7 ~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~~~~~g~--------- 77 (251)
.-||+.+..+|..|.+..+..--..++|+.+|.++-......-.+...+. ..-|.++.-..
T Consensus 135 glGCaaga~glara~~y~ra~P~~~vlvV~vELCSLt~~~~d~t~s~lVg----------taLF~DG~AA~vv~gd~~~~ 204 (356)
T COG3424 135 GLGCAAGAAGLARARDYCRAAPDANVLVVCVELCSLTYVFADDTKSNLVG----------TALFGDGAAAVVVSGDRRAE 204 (356)
T ss_pred cchhhhhhhHHHHHHHHHhhCccceEEEEEeeeeeeeeecCCCCccccee----------eeeecCCeeEEEEecccccc
Confidence 35899999999999999999999999999999754221111111111111 11122211111
Q ss_pred -----------chhhhhhcCCeEEEEEeeeeecCCCCCCCC----CCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 040515 78 -----------ELEHAKKRGAKIYAEVRGYGMSGDAHHITQ----PHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATS 142 (251)
Q Consensus 78 -----------~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~----~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~g 142 (251)
+.+.-..++ -.+.|+.+..+|.+... |..-...+...+...|...+++.+||+.|.+|=-|
T Consensus 205 ~~~~~~p~i~~s~StL~~ds----e~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~w~~HPGG 280 (356)
T COG3424 205 GKRPLRPDILDSFSTLYPDS----EDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGG 280 (356)
T ss_pred ccCCCCceecccccccCCcc----ccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCchhhhceeeeCCCC
Confidence 000001111 12456666666654222 11112345667889999999999999999999766
Q ss_pred CcCCcHHH
Q 040515 143 TPLGDTVE 150 (251)
Q Consensus 143 t~~~D~~E 150 (251)
-..-|.+|
T Consensus 281 ~KVida~~ 288 (356)
T COG3424 281 PKVIDAYE 288 (356)
T ss_pred chHHHHHH
Confidence 66555554
No 128
>PLN02932 3-ketoacyl-CoA synthase
Probab=94.57 E-value=0.045 Score=49.05 Aligned_cols=41 Identities=17% Similarity=0.234 Sum_probs=36.9
Q ss_pred eeecc-hhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcCh
Q 040515 3 NHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDA 43 (251)
Q Consensus 3 ~~tv~-~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~ 43 (251)
++.++ .+|++++.+|..|.++|+.+....+||+++|.++..
T Consensus 202 ~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~ 243 (478)
T PLN02932 202 SLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQN 243 (478)
T ss_pred EEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecccc
Confidence 56787 899999999999999999999999999999985443
No 129
>PLN02192 3-ketoacyl-CoA synthase
Probab=94.31 E-value=0.051 Score=49.04 Aligned_cols=40 Identities=18% Similarity=0.152 Sum_probs=36.5
Q ss_pred Ceeecc-hhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCc
Q 040515 2 PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 41 (251)
Q Consensus 2 p~~tv~-~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~ 41 (251)
+++.++ .+|++++.+|..|.++|+.+....+||+++|.++
T Consensus 229 ~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S 269 (511)
T PLN02192 229 LSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENIT 269 (511)
T ss_pred eEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEecc
Confidence 367788 6999999999999999999999999999999854
No 130
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=93.12 E-value=0.12 Score=46.13 Aligned_cols=37 Identities=14% Similarity=0.138 Sum_probs=34.2
Q ss_pred eeecchhhHHHHHHHHHHHHHHHhCCc--CEEEEeCcCC
Q 040515 3 NHAAVTACATGAHSIGDAARMIQFGDS--DVMVAGGTES 39 (251)
Q Consensus 3 ~~tv~~~casgl~Al~~A~~~I~~G~~--d~alvgg~e~ 39 (251)
++.+..+|+++..||..|..+|++|.. +.+||++.|.
T Consensus 107 ~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 107 GIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred EEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence 567899999999999999999999974 9999999997
No 131
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=92.04 E-value=0.99 Score=39.70 Aligned_cols=99 Identities=18% Similarity=0.198 Sum_probs=56.7
Q ss_pred EEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHH-HHHHHHHHhhccCCCCceee
Q 040515 91 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTV-EATAIRTVFSDHATSGSLAF 169 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~-E~~a~~~~~~~~~~~~~~~v 169 (251)
+.|.|++...-+.... ....+...++++++|+++||+++|||.+....+........ -...+...++.. +.|.
T Consensus 11 vaIvG~g~t~~~~~~~--~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~----~~~~ 84 (392)
T PRK06065 11 VAVIGAGLTLFRRRLL--ETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI----RKPV 84 (392)
T ss_pred eEEEEecccCCcCCCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC----CCCe
Confidence 5678887665443211 11244567899999999999999999987642211111000 111121212211 1222
Q ss_pred ecccCCccchhhhhhHHHHHHHHHHHhhCCc
Q 040515 170 SSTKGAIGHLLGAAGAVEAIFAVLTIHHGVA 200 (251)
Q Consensus 170 ~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~i 200 (251)
..+ +..+++|...+..+...++.|..
T Consensus 85 ~~V-----~~~gasG~~al~~A~~~I~sG~a 110 (392)
T PRK06065 85 SRV-----YVGGATGVMTAIAGWYHVASGLC 110 (392)
T ss_pred EEE-----ecCchhHHHHHHHHHHHHhCCCC
Confidence 221 33478888889999999998753
No 132
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=91.26 E-value=1 Score=39.49 Aligned_cols=98 Identities=15% Similarity=0.128 Sum_probs=56.9
Q ss_pred EEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCc-HHHHHHHHHHhhccCCCCceee
Q 040515 91 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD-TVEATAIRTVFSDHATSGSLAF 169 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D-~~E~~a~~~~~~~~~~~~~~~v 169 (251)
+.|.|++...-+.... ....+...++++++|+++||+++|||.+... +....++ ......+...++-.. ..+
T Consensus 3 v~IvG~g~t~~~~~~~--~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~~---~~~- 75 (385)
T PRK12578 3 VAVIGVGNSKFGRRDD--VSVQELAWESIKEALNDAGVSQTDIELVVVG-STAYRGIELYPAPIVAEYSGLTG---KVP- 75 (385)
T ss_pred eEEEeecccceeecCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccccccCChHHHHHHHhCCCC---CCe-
Confidence 3567777554332211 1123456789999999999999999998764 3222111 112222333333211 111
Q ss_pred ecccCCccchhhhhhHHHHHHHHHHHhhCCc
Q 040515 170 SSTKGAIGHLLGAAGAVEAIFAVLTIHHGVA 200 (251)
Q Consensus 170 ~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~i 200 (251)
..+ +..+++|+..+..+...++.|..
T Consensus 76 ~~v-----~~~casg~~al~~A~~~I~sG~~ 101 (385)
T PRK12578 76 LRV-----EAMCATGLAASLTAYTAVASGLV 101 (385)
T ss_pred eEE-----eccCHHHHHHHHHHHHHHHCCCC
Confidence 111 34678999999999999988864
No 133
>PLN00415 3-ketoacyl-CoA synthase
Probab=91.19 E-value=0.29 Score=43.64 Aligned_cols=39 Identities=21% Similarity=0.243 Sum_probs=35.3
Q ss_pred eeecch-hhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCc
Q 040515 3 NHAAVT-ACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 41 (251)
Q Consensus 3 ~~tv~~-~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~ 41 (251)
.+.|+. +|++++.+|..|.++++++....+||+++|..+
T Consensus 188 ~~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S 227 (466)
T PLN00415 188 TYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMT 227 (466)
T ss_pred EEEeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEeccc
Confidence 466776 999999999999999999999999999999844
No 134
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=91.04 E-value=1.9 Score=38.40 Aligned_cols=101 Identities=15% Similarity=0.005 Sum_probs=56.7
Q ss_pred EEEeeeeecCCCCCCCCC--CCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH-HHHHHHHHHhhccCCCCce
Q 040515 91 AEVRGYGMSGDAHHITQP--HIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT-VEATAIRTVFSDHATSGSL 167 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~~~--~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~-~E~~a~~~~~~~~~~~~~~ 167 (251)
++|.|.+...-+...... ....+-...+++++|+++|++++|||.+... +.+...+. .....+....+-. .+.
T Consensus 5 v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~---~~~ 80 (426)
T PRK08170 5 VYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILG-CAMPSPDEANIARVVALRLGCG---EKV 80 (426)
T ss_pred EEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCcChHHHHHHHHhCcC---CCc
Confidence 456666654433321111 1224556789999999999999999987753 22222221 1111122222211 113
Q ss_pred eeecccCCccchhhhhhHHHHHHHHHHHhhCCc
Q 040515 168 AFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVA 200 (251)
Q Consensus 168 ~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~i 200 (251)
|...+. ..++||+..+..+..+++.|..
T Consensus 81 p~~~v~-----~~CaSg~~al~~A~~~I~sG~~ 108 (426)
T PRK08170 81 PAWTVQ-----RNCASGMQALDSAAANIALGRA 108 (426)
T ss_pred eeeecc-----chhhHHHHHHHHHHHHHHCCCC
Confidence 333332 2388999999999999987764
No 135
>PRK06059 lipid-transfer protein; Provisional
Probab=91.00 E-value=1.9 Score=38.03 Aligned_cols=98 Identities=19% Similarity=0.109 Sum_probs=57.2
Q ss_pred EEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC-CcCCcHHHHHHHHHHhhccCCCCceee
Q 040515 91 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATS-TPLGDTVEATAIRTVFSDHATSGSLAF 169 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~g-t~~~D~~E~~a~~~~~~~~~~~~~~~v 169 (251)
+.|.|++...-+.. .....+...++++++|+++||+++|||.|....+. ...........+...++-. +.+.
T Consensus 6 v~Ivg~~~t~~~r~---~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~----~~~~ 78 (399)
T PRK06059 6 VYILGAGMHPWGKW---GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN----GAPV 78 (399)
T ss_pred EEEEEecccccCCC---CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC----CCce
Confidence 45777766543332 11224566789999999999999999998742111 1111112222233333321 1222
Q ss_pred ecccCCccchhhhhhHHHHHHHHHHHhhCCc
Q 040515 170 SSTKGAIGHLLGAAGAVEAIFAVLTIHHGVA 200 (251)
Q Consensus 170 ~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~i 200 (251)
.. =+..+++|+..|..+...++.|..
T Consensus 79 ~~-----v~~~Casg~~al~~A~~~I~sG~~ 104 (399)
T PRK06059 79 SS-----SYAACASGSQALQSARAQILAGLC 104 (399)
T ss_pred ec-----ccchhHHHHHHHHHHHHHHHCCCC
Confidence 22 245678889999999999988753
No 136
>PRK06158 thiolase; Provisional
Probab=90.78 E-value=1.8 Score=38.01 Aligned_cols=94 Identities=15% Similarity=0.058 Sum_probs=56.2
Q ss_pred EEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeee
Q 040515 91 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS 170 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~ 170 (251)
+.|.|++....+.+. .....+-..+++++||++|||+++|||.+.... ..... ....+...++-. +.++.
T Consensus 10 vaIvG~g~t~~~~~~--~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~-~~~~~---~~~~la~~lGl~----~~~~~ 79 (384)
T PRK06158 10 TAIVGAATAGLGEAP--GLSAMELLAQAAHRALADAGLTMADVDGLFTAS-PDDAL---WGLSVAEYLGIR----PRFVD 79 (384)
T ss_pred EEEEEeeeccceeCC--CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-CCCCC---cHHHHHHHcCCC----Ceeec
Confidence 567888776543321 111235667899999999999999999987642 21111 111232323221 12221
Q ss_pred cccCCccchhhhhhHHHHHHHHHHHhhCC
Q 040515 171 STKGAIGHLLGAAGAVEAIFAVLTIHHGV 199 (251)
Q Consensus 171 ~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 199 (251)
.-+..+++++..+..+...++.|.
T Consensus 80 -----~~~~g~~s~~~al~~A~~~I~sG~ 103 (384)
T PRK06158 80 -----GTMIGGSSFLAHLLPAALALEAGL 103 (384)
T ss_pred -----cccCccHHHHHHHHHHHHHHHcCC
Confidence 124567788888888888888775
No 137
>PRK05790 putative acyltransferase; Provisional
Probab=90.34 E-value=2.2 Score=37.44 Aligned_cols=101 Identities=14% Similarity=0.057 Sum_probs=54.5
Q ss_pred EEEeeeeecCCCCCCC--CCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCC-cHHHHHHHHHHhhccCCCCce
Q 040515 91 AEVRGYGMSGDAHHIT--QPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSL 167 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~--~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~-D~~E~~a~~~~~~~~~~~~~~ 167 (251)
+.|.|.+...-+.... ......+-..++++++|+++||+++|||.+... +.+..+ .......+....+- ... .
T Consensus 4 v~IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g-~~~~~~~~~~~~~~~~~~~gl-~~~--~ 79 (393)
T PRK05790 4 VVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMG-QVLQAGAGQNPARQAALKAGL-PVE--V 79 (393)
T ss_pred eEEEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEE-EecCCCCCCcHHHHHHHHcCC-CCC--C
Confidence 4566766554333211 111224456788999999999999999988642 211111 11111111111111 000 1
Q ss_pred eeecccCCccchhhhhhHHHHHHHHHHHhhCCc
Q 040515 168 AFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVA 200 (251)
Q Consensus 168 ~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~i 200 (251)
|...+ +..+++|+..+..+..+++.|..
T Consensus 80 ~~~~v-----~~~Casg~~al~~A~~~I~sG~~ 107 (393)
T PRK05790 80 PALTI-----NKVCGSGLKAVALAAQAIRAGDA 107 (393)
T ss_pred ceeee-----cccchHHHHHHHHHHHHHHcCCC
Confidence 21111 23678899999999999988753
No 138
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=89.77 E-value=0.84 Score=38.24 Aligned_cols=138 Identities=20% Similarity=0.243 Sum_probs=66.9
Q ss_pred CeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcChhhHHHHhhhhhcccccCCCCCCcccc----cccCCCcc
Q 040515 2 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRP----FDCGRDGF 77 (251)
Q Consensus 2 p~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----f~~~~~g~ 77 (251)
|-+-+..+|++...+|.+|..+|..|.+|.+|++......+....+.| -.+. +..|| |-....|.
T Consensus 98 Pf~GlygACST~~e~l~laa~~vdgg~a~~vla~tSSH~~tAERQfR~-----P~Ey------G~Qrp~tAqwTVTGaGa 166 (329)
T PF07451_consen 98 PFLGLYGACSTMMESLALAAMLVDGGFADYVLAATSSHFATAERQFRF-----PTEY------GGQRPPTAQWTVTGAGA 166 (329)
T ss_dssp -EEEB--CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE-CCHHHHHT--------GGG------T----TT--EE--EEEE
T ss_pred CccchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeccccchhhhhccC-----chhc------cCCCCCcccEEEeceEE
Confidence 456688999999999999999999999999999987764443322211 1111 11111 11111111
Q ss_pred -chhhhhhcCCeEEEEEeeeeec--CCCCCCCCCCCCh----HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHH
Q 040515 78 -ELEHAKKRGAKIYAEVRGYGMS--GDAHHITQPHIDG----KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVE 150 (251)
Q Consensus 78 -~~~~A~~~g~~~~a~i~g~~~~--~~~~~~~~~~~~~----~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E 150 (251)
.++ +.+..+ +|.+..+. -| .....|..++ ++....+.+=|++-|.+|+|-|.|..-+-|.. -
T Consensus 167 ~il~---~~~~~p--~It~~T~GkVvD-~G~~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTGDLg~v-----G 235 (329)
T PF07451_consen 167 AILS---KEGSGP--RITHATIGKVVD-MGIKDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVTGDLGKV-----G 235 (329)
T ss_dssp EEEE---SS--SE--EEEEEE----B--SS---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEESS-HHH-----H
T ss_pred EEEe---cCCCCc--EEEEEEEEEEEE-cCCCCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEecchHHH-----H
Confidence 111 111122 22222111 01 1122333333 34456677889999999999999999866533 4
Q ss_pred HHHHHHHhhcc
Q 040515 151 ATAIRTVFSDH 161 (251)
Q Consensus 151 ~~a~~~~~~~~ 161 (251)
..-+..++.+.
T Consensus 236 ~~il~~Ll~~~ 246 (329)
T PF07451_consen 236 RKILRDLLKEK 246 (329)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 45556665443
No 139
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=89.40 E-value=3.4 Score=36.47 Aligned_cols=101 Identities=12% Similarity=0.020 Sum_probs=55.5
Q ss_pred EEEeeeeecCCCCCCCC--CCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCc-HHHHHHHHHHhhccCCCCce
Q 040515 91 AEVRGYGMSGDAHHITQ--PHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD-TVEATAIRTVFSDHATSGSL 167 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~~--~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D-~~E~~a~~~~~~~~~~~~~~ 167 (251)
++|.|.+...-+..... .....+-...+++++|+++||+++|||.|... +.+.... ..-...+....+-. ..+
T Consensus 4 v~Ivg~~rTpfgk~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g-~~~~~~~~~~~a~~va~~~Gl~---~~~ 79 (404)
T PRK06205 4 AVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFG-QGYPNGEAPAIGRVAALDAGLP---VTV 79 (404)
T ss_pred eEEEEeecCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCCChHHHHHHHHcCCC---CCC
Confidence 34556555444332111 11124556789999999999999999988653 2221111 11111111111211 012
Q ss_pred eeecccCCccchhhhhhHHHHHHHHHHHhhCCc
Q 040515 168 AFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVA 200 (251)
Q Consensus 168 ~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~i 200 (251)
|...+ ...++||+..+..+...++.|..
T Consensus 80 p~~~V-----~~~CaSg~~Al~~A~~~I~sG~~ 107 (404)
T PRK06205 80 PGMQL-----DRRCGSGLQAVITAAMQVQTGAA 107 (404)
T ss_pred ceeeh-----hhhhhHHHHHHHHHHHHHHcCCC
Confidence 33222 34588999999999999987753
No 140
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=89.31 E-value=2 Score=37.81 Aligned_cols=98 Identities=15% Similarity=0.140 Sum_probs=56.1
Q ss_pred EEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCc-CCcHHHHHHHHHHhhccCCCCceee
Q 040515 91 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTP-LGDTVEATAIRTVFSDHATSGSLAF 169 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~-~~D~~E~~a~~~~~~~~~~~~~~~v 169 (251)
+.|.|++...-+... .....+-..++++++|+++||+++|||.+.. ++... .........+...++-. +.|.
T Consensus 9 v~IvG~g~tp~~~~~--~~~~~~L~~ea~~~AL~dagl~~~dID~v~v-g~~~~~~~~~~~~~~~a~~lGl~----~~~~ 81 (398)
T PRK06157 9 VAILGMGCTKFGERW--DAGAEDLMVEAFLEALADAGIEPKDIDAAWF-GTHYDEIGSGKSGTPLSRALRLP----NIPV 81 (398)
T ss_pred eEEEEeccccccccC--CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeccccccccchhHHHHHHcCCC----CCCE
Confidence 456676655433211 1112456778999999999999999998765 22111 00011112222222211 0121
Q ss_pred ecccCCccchhhhhhHHHHHHHHHHHhhCCc
Q 040515 170 SSTKGAIGHLLGAAGAVEAIFAVLTIHHGVA 200 (251)
Q Consensus 170 ~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~i 200 (251)
. .=+..++||+..+..++..++.|..
T Consensus 82 ~-----~v~~~c~sg~~ai~~A~~~I~sG~~ 107 (398)
T PRK06157 82 T-----RVENFCATGSEAFRGAVYAVASGAY 107 (398)
T ss_pred E-----EEecccHHHHHHHHHHHHHHHCCCC
Confidence 1 1245688999999999999998753
No 141
>PRK08304 stage V sporulation protein AD; Validated
Probab=89.29 E-value=1.5 Score=37.45 Aligned_cols=75 Identities=19% Similarity=0.188 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 191 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~ 191 (251)
.....+++++||++||++++|||++..... .+-..-...+.+.++ +|.-.+- .-+++++..+..+
T Consensus 57 seLa~eAa~~ALekAGI~~~DID~lI~Gdl---l~Q~~sAs~vA~~LG-------IPa~dV~-----gACST~~~AL~lA 121 (337)
T PRK08304 57 RKMMEDAIQQALQKANLKKSDIDYLLAGDL---LNQIISANFAARELG-------IPFLGLY-----GACSTMMESLALG 121 (337)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECC---CCCcchHHHHHHHhC-------CcEEEEe-----ccCHHHHHHHHHH
Confidence 346789999999999999999999987643 111221211212111 2222221 2356677788888
Q ss_pred HHHHhhCCcc
Q 040515 192 VLTIHHGVAP 201 (251)
Q Consensus 192 ~~~l~~~~ip 201 (251)
...++.|..-
T Consensus 122 a~lI~SG~ad 131 (337)
T PRK08304 122 SMLIDGGFAD 131 (337)
T ss_pred HHHHhcCCCC
Confidence 8888877643
No 142
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=89.24 E-value=3.8 Score=33.21 Aligned_cols=78 Identities=17% Similarity=0.065 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAV 192 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~ 192 (251)
+....+++++|+++|++++|||.|....+........-+..+...++-. . .+... + ....++++..|..+.
T Consensus 9 ~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~---~~~~~----i-~~~C~s~~~al~~A~ 79 (254)
T cd00327 9 ELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-G---GPAYS----V-NQACATGLTALALAV 79 (254)
T ss_pred HHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-C---CCcce----e-ccHhHHHHHHHHHHH
Confidence 4567889999999999999999988663322111122223344444321 1 11111 2 245677888888888
Q ss_pred HHHhhCC
Q 040515 193 LTIHHGV 199 (251)
Q Consensus 193 ~~l~~~~ 199 (251)
..++.+.
T Consensus 80 ~~i~~g~ 86 (254)
T cd00327 80 QQVQNGK 86 (254)
T ss_pred HHHHCCC
Confidence 8888764
No 143
>PRK09051 beta-ketothiolase; Provisional
Probab=88.86 E-value=4 Score=35.95 Aligned_cols=80 Identities=18% Similarity=0.077 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCC--cHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG--DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAI 189 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~--D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~ 189 (251)
.+....+++++|+++|++|+|||.|... +.+... +......+....+-. ...|...+ +..++||+..+.
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID~vi~g-~~~~~~~~~~~~a~~~~~~~Gl~---~~~p~~~V-----~~aCaSg~~Al~ 98 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVGHVVFG-HVIPTEPRDMYLSRVAAINAGVP---QETPAFNV-----NRLCGSGLQAIV 98 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEe-eeccccCCCccHHHHHHHHcCCC---CCCceEEe-----cccchHHHHHHH
Confidence 4456789999999999999999987753 222211 222222222211211 01333333 345789999999
Q ss_pred HHHHHHhhCCc
Q 040515 190 FAVLTIHHGVA 200 (251)
Q Consensus 190 ~~~~~l~~~~i 200 (251)
.+...++.|..
T Consensus 99 ~A~~~I~sG~~ 109 (394)
T PRK09051 99 SAAQAILLGDA 109 (394)
T ss_pred HHHHHHHcCCC
Confidence 99999987764
No 144
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=88.81 E-value=3.4 Score=36.32 Aligned_cols=81 Identities=16% Similarity=0.111 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 191 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~ 191 (251)
.+-...+++++|+++||+++|||.+..-..............+....+- ...+|...+ +..++||+..+..+
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl---~~~~p~~~v-----~~~caSg~~av~~A 97 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGL---PPSTICTTV-----NKVCASGMKAVMLA 97 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCC---CCCCceEEE-----eccchHHHHHHHHH
Confidence 4556789999999999999999998762111001011111111111121 111333322 34689999999999
Q ss_pred HHHHhhCCc
Q 040515 192 VLTIHHGVA 200 (251)
Q Consensus 192 ~~~l~~~~i 200 (251)
..+++.|..
T Consensus 98 a~~I~sG~~ 106 (394)
T PLN02644 98 AQSIQLGIN 106 (394)
T ss_pred HHHHHcCCC
Confidence 999987743
No 145
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=88.55 E-value=1.7 Score=36.97 Aligned_cols=74 Identities=19% Similarity=0.192 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAV 192 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~ 192 (251)
....+++++||++||++++|||++..... .....-+..+.+.++ +|.-.+ ..-+++++..+..+.
T Consensus 52 eLa~eAa~~ALekAGL~~~DID~IIvGdl---~~Q~~~As~vA~~LG-------IP~fdV-----~~ACSTf~~AL~lAa 116 (327)
T TIGR02845 52 KLMEDAVNLALKKANLKKDDVDFFLAGDL---LNQIITANFVARDLG-------IPFLGL-----YGACSTSMETLALGA 116 (327)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEeCC---CCcccHHHHHHHHhC-------CCEEEE-----eccCHHHHHHHHHHH
Confidence 46778999999999999999999987532 111222222222222 222111 123567788888888
Q ss_pred HHHhhCCcc
Q 040515 193 LTIHHGVAP 201 (251)
Q Consensus 193 ~~l~~~~ip 201 (251)
..++.|..-
T Consensus 117 ~lI~SG~ad 125 (327)
T TIGR02845 117 MLVDGGFAD 125 (327)
T ss_pred HHHhCCCCC
Confidence 888887643
No 146
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=88.29 E-value=0.8 Score=36.75 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=37.9
Q ss_pred CCeeecchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCcCh
Q 040515 1 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDA 43 (251)
Q Consensus 1 Gp~~tv~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~~~ 43 (251)
+|+.+|..+-.|...||..|+..+..| ++.||++.+|.....
T Consensus 105 ~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~ 146 (218)
T PF13723_consen 105 GPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPE 146 (218)
T ss_pred CceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCCh
Confidence 588999999999999999999999999 999999999985543
No 147
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=88.22 E-value=3.9 Score=35.79 Aligned_cols=78 Identities=10% Similarity=0.123 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCC----cHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG----DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVE 187 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~----D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~ 187 (251)
.+-...+++++|+++||+++|||.+.. |+....+ .......+ ..... ..+|...+ +..++||+..
T Consensus 27 ~~L~~~a~~~al~dagl~~~~ID~vv~-g~~~~~~~~~~~~~~~~~l---~~gl~--~~~p~~~v-----~~acaSg~~A 95 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPAAVDDVIF-GCVDTIGPQAGNIARTSWL---AAGLP--EEVPGVTV-----DRQCGSSQQA 95 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEE-EeeccCCcccccHHHHHHH---HcCCC--CCCceeee-----cchhhhHHHH
Confidence 445678999999999999999998876 3211111 11111111 11110 01222111 3458899999
Q ss_pred HHHHHHHHhhCCc
Q 040515 188 AIFAVLTIHHGVA 200 (251)
Q Consensus 188 l~~~~~~l~~~~i 200 (251)
+..++.+++.|..
T Consensus 96 v~~Aa~~I~sG~~ 108 (382)
T PRK07801 96 IHFAAQAVMSGTQ 108 (382)
T ss_pred HHHHHHHHHCCCC
Confidence 9999999988764
No 148
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=88.22 E-value=3.9 Score=36.05 Aligned_cols=81 Identities=21% Similarity=0.273 Sum_probs=48.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 191 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~ 191 (251)
.+....+++++|+++||+++|||.+..- +....+.. -..+.....+. ....+.|...+ +..++||+..+..+
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~dID~vi~G-~~~~~~~~-~~~~~~~~l~a-g~~~~~p~~~V-----~~aCaSG~~Av~~A 103 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQIDEVVMG-CVLPAGQG-QAPARQAALGA-GLPLSVGCTTV-----NKMCGSGMRAAMFA 103 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEE-ecCCCccc-hHHHHHHHHcC-CCCCCccEeec-----cccchHHHHHHHHH
Confidence 4456789999999999999999987653 22222221 11111111211 11111333333 34579999999999
Q ss_pred HHHHhhCCc
Q 040515 192 VLTIHHGVA 200 (251)
Q Consensus 192 ~~~l~~~~i 200 (251)
..+++.|..
T Consensus 104 ~~~I~sG~~ 112 (397)
T PRK06954 104 HDMLVAGSV 112 (397)
T ss_pred HHHHHCCCC
Confidence 999988764
No 149
>PRK08256 lipid-transfer protein; Provisional
Probab=87.96 E-value=2.1 Score=37.54 Aligned_cols=97 Identities=14% Similarity=0.048 Sum_probs=54.2
Q ss_pred EEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEec-CCCCcCCcHHHHHHHHHHhhccCCCCceee
Q 040515 91 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAH-ATSTPLGDTVEATAIRTVFSDHATSGSLAF 169 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h-~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v 169 (251)
+.|.|++...-+.. .......+-...+++++|+++|++++|||.+... ..+..... ..+...++-.. ++.
T Consensus 3 v~IvG~~~t~~~~~-~~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~~----~~~~~~lGl~~----~~~ 73 (391)
T PRK08256 3 VFVAGVGMTPFEKP-GASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTSG----QRALYEVGMTG----IPI 73 (391)
T ss_pred EEEEeccccccccC-CCCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcchh----HHHHHHcCCCC----CCC
Confidence 34666654433321 1111123456788999999999999999976542 11111111 11111112110 111
Q ss_pred ecccCCccchhhhhhHHHHHHHHHHHhhCCcc
Q 040515 170 SSTKGAIGHLLGAAGAVEAIFAVLTIHHGVAP 201 (251)
Q Consensus 170 ~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip 201 (251)
..=...++||+..+..+...++.|..-
T Consensus 74 -----~~v~~~caSg~~ai~~A~~~I~sG~~d 100 (391)
T PRK08256 74 -----VNVNNNCSTGSTALFLARQAVRSGAAD 100 (391)
T ss_pred -----cccccccHHHHHHHHHHHHHHHCCCCC
Confidence 122456889999999999999988753
No 150
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=87.92 E-value=1.7 Score=38.72 Aligned_cols=98 Identities=13% Similarity=-0.026 Sum_probs=56.0
Q ss_pred EEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH--HHHHHHHHHhhccCCCCcee
Q 040515 91 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT--VEATAIRTVFSDHATSGSLA 168 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~--~E~~a~~~~~~~~~~~~~~~ 168 (251)
+.|.|++...-+.+... ....+-...++++||+++||+++|||.+....... ..+. .-...+....+-. +.|
T Consensus 18 VaIvG~g~Tpfgr~~~~-~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~-~~~g~~~~~~~~~~~lGl~----~~~ 91 (430)
T PRK06365 18 VYMVAAGVTKFDKASPY-MDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSD-HFQRQLLAGIMVQDYLGLV----PKP 91 (430)
T ss_pred EEEEEeeecCccccCCC-CCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccc-cccccchhhHHHHHhcCCC----CCc
Confidence 56777776554432111 11135567889999999999999999876532111 1110 0011111111110 122
Q ss_pred eecccCCccchhhhhhHHHHHHHHHHHhhCC
Q 040515 169 FSSTKGAIGHLLGAAGAVEAIFAVLTIHHGV 199 (251)
Q Consensus 169 v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 199 (251)
.. .-+..++||...+..++..++.|.
T Consensus 92 ~~-----~v~~~~aSg~~ai~~A~~~I~sG~ 117 (430)
T PRK06365 92 SK-----RIEGGGATGGLAFQAGYEEIASGR 117 (430)
T ss_pred eE-----EEeCCcHHHHHHHHHHHHHHHcCC
Confidence 22 223468999999999999998875
No 151
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=87.65 E-value=3.4 Score=36.35 Aligned_cols=80 Identities=16% Similarity=0.090 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHH-HHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTV-EATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~-E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.+....+++++|+++|++|+|||.|... +.+..+|.. =...+....+-. ...|...+ +..++||+..+..
T Consensus 27 ~eLa~~A~~~aL~~agl~~~dID~vi~g-~~~~~~~~~~~~~~~~~~~Gl~---~~~p~~~V-----~~~CaSg~~Al~~ 97 (393)
T PRK08235 27 TELGGIAIKEALERANVSAEDVEEVIMG-TVLQGGQGQIPSRQAARAAGIP---WEVQTETV-----NKVCASGLRAVTL 97 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccCCCCCCHHHHHHHHcCCC---CCcceeeh-----hhhhhHHHHHHHH
Confidence 4456789999999999999999988764 222211210 011111111110 01333333 3457899999999
Q ss_pred HHHHHhhCCc
Q 040515 191 AVLTIHHGVA 200 (251)
Q Consensus 191 ~~~~l~~~~i 200 (251)
+...++.|..
T Consensus 98 A~~~I~sG~~ 107 (393)
T PRK08235 98 ADQIIRAGDA 107 (393)
T ss_pred HHHHHHCCCC
Confidence 9999987753
No 152
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=87.36 E-value=2.2 Score=36.41 Aligned_cols=79 Identities=18% Similarity=0.101 Sum_probs=46.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 191 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~ 191 (251)
.+-..++++++|+++|++|+|||++... +.++..-......+...++-. +.+...+. ..+++|+..+..+
T Consensus 52 ~~la~~A~~~aL~~ag~~~~dId~vi~~-s~~~~~~~~~~~~v~~~Lg~~----~~~~~~v~-----~~Casg~~al~~A 121 (326)
T CHL00203 52 TKLAAEAANKALDKAHMDPLEIDLIILA-TSTPDDLFGSASQLQAEIGAT----RAVAFDIT-----AACSGFILALVTA 121 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCCCCchHHHHHHHhCCC----CCceeeec-----ccchhHHHHHHHH
Confidence 3456789999999999999999998864 322221111122233333321 12222221 2357778888778
Q ss_pred HHHHhhCCc
Q 040515 192 VLTIHHGVA 200 (251)
Q Consensus 192 ~~~l~~~~i 200 (251)
...++.+..
T Consensus 122 ~~~i~sg~~ 130 (326)
T CHL00203 122 TQFIQNGSY 130 (326)
T ss_pred HHHHHcCCC
Confidence 788877653
No 153
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=87.04 E-value=3.5 Score=36.14 Aligned_cols=98 Identities=20% Similarity=0.214 Sum_probs=53.7
Q ss_pred EEEeeeeecCC-CCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH-HHHHHHHHHhhccCCCCcee
Q 040515 91 AEVRGYGMSGD-AHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT-VEATAIRTVFSDHATSGSLA 168 (251)
Q Consensus 91 a~i~g~~~~~~-~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~-~E~~a~~~~~~~~~~~~~~~ 168 (251)
+.|.|++.... +.+.. ....+...+++++||++|||+++|||.|....+.....+. .-...+...++-. +.+
T Consensus 5 v~IvG~g~t~~~~~~~~--~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~----~~~ 78 (386)
T PRK08313 5 AAVLGTGQTKYVAKRQD--VSMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT----GKP 78 (386)
T ss_pred EEEEEeecCCcCccCCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC----CCc
Confidence 45778876553 32211 1124567789999999999999999988754211111000 0001122222211 112
Q ss_pred eecccCCccchhhhhhHHHHHHHHHHHhhCC
Q 040515 169 FSSTKGAIGHLLGAAGAVEAIFAVLTIHHGV 199 (251)
Q Consensus 169 v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 199 (251)
...+ +..+++|...+..+...++.|.
T Consensus 79 ~~~v-----~~~casg~~al~~A~~~I~sG~ 104 (386)
T PRK08313 79 LIRV-----HTAGSVGGSTAVVAASLVQSGV 104 (386)
T ss_pred eEEE-----eccCHHHHHHHHHHHHHHHCCC
Confidence 1111 3346677778888888888764
No 154
>PLN02932 3-ketoacyl-CoA synthase
Probab=87.02 E-value=1.7 Score=39.12 Aligned_cols=77 Identities=13% Similarity=0.100 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHH
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVL 193 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~ 193 (251)
-...+++++|+++|++|+|||++... |.|..--+.-+.-+..-++-+.. +.- =.++....++|+..+-.+-.
T Consensus 151 la~~Aa~~aL~~agi~p~dId~lIv~-tst~~~~Pslaa~V~~~lGlr~~---i~~----fdL~gmGCSggl~aL~lA~~ 222 (478)
T PLN02932 151 VIIGAVDNLFRNTGISPSDIGILVVN-SSTFNPTPSLSSILVNKFKLRDN---IKS----LNLGGMGCSAGVIAIDAAKS 222 (478)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEE-ccCCCCCCcHHHHHHHHhCCCCC---ceE----EEeccchhhhHHHHHHHHHH
Confidence 34578899999999999999998754 34433333333334343432111 111 12344556777777777777
Q ss_pred HHhhC
Q 040515 194 TIHHG 198 (251)
Q Consensus 194 ~l~~~ 198 (251)
.|+.+
T Consensus 223 ll~~~ 227 (478)
T PLN02932 223 LLQVH 227 (478)
T ss_pred HHHcC
Confidence 77764
No 155
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=86.83 E-value=5.4 Score=35.07 Aligned_cols=95 Identities=15% Similarity=0.002 Sum_probs=56.8
Q ss_pred EEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeee
Q 040515 91 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFS 170 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~ 170 (251)
+.|.|++...-+.+.. ....+-..+++++||++|||+++|||.+...+ .. ..+ ....+...++-. +.++.
T Consensus 7 vaIvG~g~t~~~~~~~--~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~-~~-~~~--~~~~~~~~lGl~----~~~~~ 76 (388)
T PRK08142 7 AYIVGAYEHPTRKAPD--KSVAQLHAEVAKGALADAGLSLADVDGYFCAG-DA-PGL--GPASMVDYLGLK----LRHVD 76 (388)
T ss_pred EEEEEEeeccceeCCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcC-CC-CCc--cHHHHHHhCCCC----Ceeec
Confidence 4578888765443211 11245677899999999999999999876521 11 111 111122222221 12332
Q ss_pred cccCCccchhhhhhHHHHHHHHHHHhhCCc
Q 040515 171 STKGAIGHLLGAAGAVEAIFAVLTIHHGVA 200 (251)
Q Consensus 171 ~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~i 200 (251)
. .+..+++|...+..++..++.|..
T Consensus 77 ~-----v~~gg~s~~~a~~~A~~~I~sG~~ 101 (388)
T PRK08142 77 S-----TETGGSSYLAHVGHAAQAIAAGKC 101 (388)
T ss_pred c-----ccCCcHHHHHHHHHHHHHHHcCCC
Confidence 2 245688888889999999988853
No 156
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=86.48 E-value=3.6 Score=34.83 Aligned_cols=79 Identities=14% Similarity=0.098 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 191 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~ 191 (251)
......+++++|+++|++++|||.+....+......+.-+..+...++-.. .+...+ ...+++|+..|..+
T Consensus 52 ~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~----~~~~~v-----~~~C~s~~~al~~A 122 (318)
T TIGR00747 52 STMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKG----IPAFDL-----SAACAGFIYALSVA 122 (318)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCCC----CcEeeh-----hhhhHHHHHHHHHH
Confidence 445678999999999999999998875432211112222223334343211 222222 23467788888888
Q ss_pred HHHHhhCC
Q 040515 192 VLTIHHGV 199 (251)
Q Consensus 192 ~~~l~~~~ 199 (251)
...++.+.
T Consensus 123 ~~~i~~g~ 130 (318)
T TIGR00747 123 KQYIESGK 130 (318)
T ss_pred HHHHHcCC
Confidence 88887664
No 157
>PRK07937 lipid-transfer protein; Provisional
Probab=86.40 E-value=5 Score=34.78 Aligned_cols=46 Identities=7% Similarity=0.159 Sum_probs=32.1
Q ss_pred EEEeeeeecCCCCCCCCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEE
Q 040515 91 AEVRGYGMSGDAHHITQPHID-GKGAILAMTRALKQSGLQSHQVDYVN 137 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~~~~~~-~~~~~~a~~~al~~Agi~~~dId~i~ 137 (251)
+.|.|++...-+.... .... .+-..+++++||++|||+++|||.+.
T Consensus 4 vaIvG~g~t~~~~~~~-~~~~~~el~~eA~~~Al~DAgl~~~dID~~~ 50 (352)
T PRK07937 4 VAVVGFAQAPHVRRTD-GTTNGVEMLMPCFAELYAELGITKSDIGFWC 50 (352)
T ss_pred EEEEEeeccccccCCC-CCCcHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 4577877665433211 0112 45678899999999999999999884
No 158
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=86.28 E-value=5.1 Score=35.25 Aligned_cols=100 Identities=16% Similarity=0.042 Sum_probs=56.2
Q ss_pred EEEeeeeecCCCCCCC--CCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCc--HHHHHHHHHHhhccCCCCc
Q 040515 91 AEVRGYGMSGDAHHIT--QPHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD--TVEATAIRTVFSDHATSGS 166 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~--~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D--~~E~~a~~~~~~~~~~~~~ 166 (251)
++|.|.+...-+.+.. ......+....+++++|+++|++++|||.|... +.+...+ ..-.. +....+-. ..
T Consensus 4 v~Ivg~~rTpfgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g-~~~~~~~~~~~a~~-va~~lGl~---~~ 78 (393)
T PRK05656 4 VVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILG-QVLTAGAGQNPARQ-AAIKAGLP---HS 78 (393)
T ss_pred EEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-EecCCCCCCcHHHH-HHHHcCCC---CC
Confidence 4566666554443211 111123456789999999999999999987763 2211111 11111 11212211 01
Q ss_pred eeeecccCCccchhhhhhHHHHHHHHHHHhhCCc
Q 040515 167 LAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVA 200 (251)
Q Consensus 167 ~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~i 200 (251)
.|...+ +..+++|+..+..+...++.|..
T Consensus 79 ~p~~~V-----~~~Casg~~ai~~A~~~I~sG~~ 107 (393)
T PRK05656 79 VPAMTL-----NKVCGSGLKALHLAAQAIRCGDA 107 (393)
T ss_pred cceEEe-----cccchhHHHHHHHHHHHHHcCCC
Confidence 233233 34678999999999999988764
No 159
>PRK12404 stage V sporulation protein AD; Provisional
Probab=86.25 E-value=2 Score=36.53 Aligned_cols=74 Identities=14% Similarity=0.141 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAV 192 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~ 192 (251)
....+++++||+++||+++|||++.....- +..+=..-+.+-++ +|...+ ..-+++++..+..+.
T Consensus 56 ~L~~EA~~~AL~kAGI~~~DID~i~vGdL~---nQ~ipssfvar~LG-------IP~~gV-----~gACSTg~eAL~lAa 120 (334)
T PRK12404 56 KLLEEACSRAIEKAKLRKEDIQFFLAGDLM---NQITPTSFAARTLG-------IPYLGL-----FGACSTSMEGLALAA 120 (334)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecC---CCcCcHHHHHHHhC-------CCccce-----eecCHHHHHHHHHHH
Confidence 456789999999999999999999986433 11111111112122 232111 223567788888888
Q ss_pred HHHhhCCcc
Q 040515 193 LTIHHGVAP 201 (251)
Q Consensus 193 ~~l~~~~ip 201 (251)
+.++.|..-
T Consensus 121 ~~VaSG~Ad 129 (334)
T PRK12404 121 LIVNSGGAK 129 (334)
T ss_pred HHHHcCCCC
Confidence 888887653
No 160
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=86.25 E-value=6.6 Score=34.67 Aligned_cols=81 Identities=16% Similarity=0.148 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHHHHc-CCCCCCccEEEec-CCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHH
Q 040515 112 GKGAILAMTRALKQS-GLQSHQVDYVNAH-ATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAI 189 (251)
Q Consensus 112 ~~~~~~a~~~al~~A-gi~~~dId~i~~h-~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~ 189 (251)
.+-...+++++|+++ ||+++|||.|..- .... ..+.....-+........ .++|...+ +..++||+..+.
T Consensus 32 ~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~-~~~~~~~ar~~~~~~Gl~--~~~p~~~V-----~~aCaSg~~Al~ 103 (399)
T PRK09052 32 DDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPE-AEQGLNVARIGALLAGLP--NSVGGVTV-----NRFCASGLQAVA 103 (399)
T ss_pred HHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCC-CCCCchHHHHHHHHcCCC--CCCceeee-----cchhhHHHHHHH
Confidence 455678999999997 9999999987653 2221 111111111111111111 11333333 346789999999
Q ss_pred HHHHHHhhCCc
Q 040515 190 FAVLTIHHGVA 200 (251)
Q Consensus 190 ~~~~~l~~~~i 200 (251)
.+...++.|..
T Consensus 104 ~A~~~I~sG~~ 114 (399)
T PRK09052 104 MAADRIRVGEA 114 (399)
T ss_pred HHHHHHHCCCC
Confidence 99999988764
No 161
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=86.14 E-value=2.7 Score=34.82 Aligned_cols=79 Identities=20% Similarity=0.230 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecC-CCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHA-TSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 191 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~-~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~ 191 (251)
+-...+++.+|++++|+|++||.+..-- .....+..+-..+. +..... ..+|...+ +-.++||+..+..+
T Consensus 28 ~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~--l~aGl~--~~vp~~~V-----~~~CaSG~~Av~~a 98 (264)
T PF00108_consen 28 DLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAA--LAAGLP--ESVPATTV-----NRACASGLQAVHLA 98 (264)
T ss_dssp HHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHH--HHTTS---TTSEEEEE-----E-GGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhh--hhcccc--cccceeee-----hhhhhHHHHHHHHh
Confidence 4567889999999999999999876632 22222222212111 111111 12555554 45589999999999
Q ss_pred HHHHhhCCc
Q 040515 192 VLTIHHGVA 200 (251)
Q Consensus 192 ~~~l~~~~i 200 (251)
..+++.|..
T Consensus 99 ~~~I~sG~~ 107 (264)
T PF00108_consen 99 AMAIASGEA 107 (264)
T ss_dssp HHHHHTTS-
T ss_pred hhhhcCCCc
Confidence 999998764
No 162
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=86.08 E-value=1.1 Score=34.40 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=31.8
Q ss_pred eecchhhHHHHHHHHHHHHHHHhCCcC--EEEEeCcCC
Q 040515 4 HAAVTACATGAHSIGDAARMIQFGDSD--VMVAGGTES 39 (251)
Q Consensus 4 ~tv~~~casgl~Al~~A~~~I~~G~~d--~alvgg~e~ 39 (251)
+-+-.+|-+|..||..|+.+|+++..| .+||++.|.
T Consensus 111 ~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDi 148 (174)
T PF01154_consen 111 VEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDI 148 (174)
T ss_dssp EEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEE
T ss_pred eehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccc
Confidence 445789999999999999999998765 899999986
No 163
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=86.04 E-value=3.8 Score=34.98 Aligned_cols=80 Identities=16% Similarity=0.085 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 191 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~ 191 (251)
.+...++++++|+++|++++|||.+...........+.-+.-+...++-.. .++...+ . ..+++|+..+..+
T Consensus 62 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~---~~~~~~v----~-~~C~~~~~al~~A 133 (338)
T PRK09258 62 SDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPK---SCANFDV----S-NACLGFLNGMLDA 133 (338)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCC---CCceeeh----h-hhhHHHHHHHHHH
Confidence 356678999999999999999999875322112222222222333333210 1222222 1 2466777777777
Q ss_pred HHHHhhCC
Q 040515 192 VLTIHHGV 199 (251)
Q Consensus 192 ~~~l~~~~ 199 (251)
...++.+.
T Consensus 134 ~~~i~~g~ 141 (338)
T PRK09258 134 ANMIELGQ 141 (338)
T ss_pred HHHHHcCC
Confidence 77776653
No 164
>PLN03168 chalcone synthase; Provisional
Probab=86.00 E-value=2.9 Score=36.70 Aligned_cols=75 Identities=16% Similarity=0.044 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeeccc-CCccchhhhhhHHHHHHHHH
Q 040515 115 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTK-GAIGHLLGAAGAVEAIFAVL 193 (251)
Q Consensus 115 ~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k-~~~Gh~~~AsG~~~l~~~~~ 193 (251)
-.+++++||+++|++++|||+|... |.|...-+.-..-+...++-... ++ ....+..+++++..|-.+..
T Consensus 105 a~~Aa~~AL~~ag~~~~dId~lI~~-T~Tg~~~Ps~a~~l~~~LGl~~~--------~~r~~d~~~gC~g~~~aL~~A~~ 175 (389)
T PLN03168 105 AAEAAQKAIKEWGGRKSDITHIVFA-TTSGVNMPGADHALAKLLGLKPT--------VKRVMMYQTGCFGGASVLRVAKD 175 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCccHHHHHHHHhCcCCc--------ceeeeeeCCccHHHHHHHHHHHH
Confidence 3578899999999999999998654 33333223333333333332110 11 12234455666777766666
Q ss_pred HHhhC
Q 040515 194 TIHHG 198 (251)
Q Consensus 194 ~l~~~ 198 (251)
.++.+
T Consensus 176 ~i~~~ 180 (389)
T PLN03168 176 LAENN 180 (389)
T ss_pred HHHhC
Confidence 66654
No 165
>PLN02287 3-ketoacyl-CoA thiolase
Probab=85.94 E-value=5.7 Score=35.67 Aligned_cols=100 Identities=9% Similarity=0.011 Sum_probs=55.5
Q ss_pred EEEeeeeecCCCCC-CCC--CCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCc--HHHHHHHHHHhhccCCCC
Q 040515 91 AEVRGYGMSGDAHH-ITQ--PHIDGKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD--TVEATAIRTVFSDHATSG 165 (251)
Q Consensus 91 a~i~g~~~~~~~~~-~~~--~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D--~~E~~a~~~~~~~~~~~~ 165 (251)
++|.|.+...-+.. ... .....+-..++++++|+++|++++|||.|.. |+...... .....-+....+-. .
T Consensus 48 V~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~-G~~~~~~~~~~~~~r~~a~~~Gl~---~ 123 (452)
T PLN02287 48 VVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVV-GTVLAPGSQRANECRMAAFYAGFP---E 123 (452)
T ss_pred EEEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeecCcccccchHHHHHHHHCCCC---C
Confidence 55777775544431 111 1112445678899999999999999998864 22221111 11111111111111 0
Q ss_pred ceeeecccCCccchhhhhhHHHHHHHHHHHhhCC
Q 040515 166 SLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGV 199 (251)
Q Consensus 166 ~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 199 (251)
.+|...+ +..++||+..+..+..+++.|.
T Consensus 124 ~~pa~~V-----~~~CaSG~~Ai~~Aa~~I~sG~ 152 (452)
T PLN02287 124 TVPVRTV-----NRQCSSGLQAVADVAAAIKAGF 152 (452)
T ss_pred CcceEEE-----eccCchHHHHHHHHHHHHHcCC
Confidence 1333222 3567899999999999988764
No 166
>PLN02377 3-ketoacyl-CoA synthase
Probab=85.90 E-value=3.8 Score=37.24 Aligned_cols=76 Identities=8% Similarity=0.078 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHH
Q 040515 115 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLT 194 (251)
Q Consensus 115 ~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~ 194 (251)
...+++++|+++|++|+|||++....++.. --+.-+.-+...++-+.. +.-. .++-...++|+..+-.+-..
T Consensus 176 ~~~A~~~aL~kaGi~p~dID~LVv~cS~~~-~~PSlaa~V~~~LGlr~~---v~af----dL~gmGCsggl~aL~lA~~l 247 (502)
T PLN02377 176 MFGALDNLFANTNVNPKDIGILVVNCSLFN-PTPSLSAMIVNKYKLRGN---IRSF----NLGGMGCSAGVIAVDLAKDM 247 (502)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCC-CCCcHHHHHHHHhCCCCC---CeEE----ecccchhhHHHHHHHHHHHH
Confidence 346788999999999999999987544431 122233334444442211 1111 23334456677777666666
Q ss_pred HhhC
Q 040515 195 IHHG 198 (251)
Q Consensus 195 l~~~ 198 (251)
|+.+
T Consensus 248 l~~~ 251 (502)
T PLN02377 248 LQVH 251 (502)
T ss_pred HHcC
Confidence 6654
No 167
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=85.90 E-value=2.5 Score=37.18 Aligned_cols=80 Identities=11% Similarity=0.148 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCC--cHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG--DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAI 189 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~--D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~ 189 (251)
.+...++++++|+++||+++|||.+..- +....+ ........ .+...... ++|.. .=+..++||+..+.
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID~vi~g-~~~~~~~~~~~~~~~~-~l~a~~~~--~~p~~-----~V~~~CaSg~~ai~ 103 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEIDDIITG-CALQVGENWLYGGRHP-IFLARLPY--NIPAM-----AVDRQCASSLTTVS 103 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeeEEE-eecCCCcccccHHHHH-HHHcCCCC--CCcch-----hhhhhhHHHHHHHH
Confidence 4456789999999999999999987653 322211 11112211 12222111 12222 22566899999999
Q ss_pred HHHHHHhhCCc
Q 040515 190 FAVLTIHHGVA 200 (251)
Q Consensus 190 ~~~~~l~~~~i 200 (251)
.++.+++.|..
T Consensus 104 ~A~~~I~sG~~ 114 (394)
T PRK06445 104 IGAMEIATGMA 114 (394)
T ss_pred HHHHHHHcCCC
Confidence 99999998764
No 168
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=85.88 E-value=3.7 Score=36.04 Aligned_cols=80 Identities=18% Similarity=0.097 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCc-HHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD-TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D-~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.....++++++|+++|++++|||.+... +.++..+ ......+....+-. ...|...+. ..+++|+..+..
T Consensus 22 ~~La~~A~~~Al~dAgl~~~dID~vv~g-~~~~~~~~~~~a~~va~~lGl~---~~~~~~~v~-----~~Casg~~al~~ 92 (386)
T TIGR01930 22 EDLGAAVIKELLERNPLDPELIDDVIFG-NVLQAGEQQNIARQAALLAGLP---ESVPAYTVN-----RQCASGLQAVIL 92 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCCChHHHHHHHHcCCC---CCceeeeec-----chhhHHHHHHHH
Confidence 3456789999999999999999998763 3222211 21121122222211 112332222 457888989999
Q ss_pred HHHHHhhCCc
Q 040515 191 AVLTIHHGVA 200 (251)
Q Consensus 191 ~~~~l~~~~i 200 (251)
+...++.|..
T Consensus 93 A~~~I~sG~~ 102 (386)
T TIGR01930 93 AAQLIRAGEA 102 (386)
T ss_pred HHHHHHCCCC
Confidence 9999988764
No 169
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=85.74 E-value=5.7 Score=34.89 Aligned_cols=80 Identities=13% Similarity=0.026 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEec-CCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAH-ATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h-~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.+-...+++++|+++||+++|||.+..- ......+...... +....+- ...+|..++. ..++||+..+..
T Consensus 27 ~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~-~~~~~Gl---~~~~p~~~v~-----~~caSg~~av~~ 97 (388)
T PRK06366 27 PQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQ-AAYHAGL---PFGVTKYTVN-----VVCASGMLAVES 97 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHH-HHHHCCC---CCCCcceeee-----chhhHHHHHHHH
Confidence 3456789999999999999999987652 1101111111111 1111111 0112333332 468999999999
Q ss_pred HHHHHhhCCc
Q 040515 191 AVLTIHHGVA 200 (251)
Q Consensus 191 ~~~~l~~~~i 200 (251)
++.+++.|..
T Consensus 98 Aa~~I~sG~~ 107 (388)
T PRK06366 98 AAREIMLGER 107 (388)
T ss_pred HHHHHhcCCC
Confidence 9999988764
No 170
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=85.63 E-value=2.1 Score=36.60 Aligned_cols=66 Identities=17% Similarity=0.151 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE-ecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhh
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVN-AHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGA 182 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~-~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~A 182 (251)
+.+..+++++|++||++.+|||.|- +.|.|-.-.=.+-+.+-+.+--.. ..|+..+....||.+.+
T Consensus 52 e~i~~li~~al~eA~~~~~dID~IA~T~gPGL~gaL~VG~~~Ak~LA~a~----~kPli~VnH~~gHi~a~ 118 (342)
T COG0533 52 ENIPPLIEEALAEAGVSLEDIDAIAVTAGPGLGGALLVGATAAKALALAL----NKPLIPVNHLEGHIEAA 118 (342)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEecCCCchhHHHHHHHHHHHHHHHh----CCCEeecchHHHHHHHH
Confidence 4566789999999999999999975 556666544343333333321111 15777777788888765
No 171
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=85.58 E-value=3 Score=36.12 Aligned_cols=79 Identities=13% Similarity=0.039 Sum_probs=45.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCc-CCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTP-LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~-~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.....++++++|+++|++++|||++... +.++ ..-+.-+..+...++-... ++.-- + ....++++..|..
T Consensus 61 ~~la~~Aa~~aL~~a~~~~~dId~lI~~-t~t~d~~~P~~a~~v~~~Lg~~~~---~~~~d----i-~~~C~g~~~aL~~ 131 (353)
T PRK12880 61 SDLGKHAANTLLQGLNIDKNSLDALIVV-TQSPDFFMPSTACYLHQLLNLSSK---TIAFD----L-GQACAGYLYGLFV 131 (353)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-cCCCCCCCCcHHHHHHHHhCCCCC---ceEEe----h-hhhhHHHHHHHHH
Confidence 3456789999999999999999999865 3332 2333344444444443211 11111 1 1234555666666
Q ss_pred HHHHHhhCC
Q 040515 191 AVLTIHHGV 199 (251)
Q Consensus 191 ~~~~l~~~~ 199 (251)
+...++.+.
T Consensus 132 A~~~i~~~~ 140 (353)
T PRK12880 132 AHSLIQSGL 140 (353)
T ss_pred HHHHHHcCC
Confidence 666666554
No 172
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=85.49 E-value=5.4 Score=33.97 Aligned_cols=80 Identities=13% Similarity=0.031 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCC-cHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~-D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.+...++++++|+++|++++|||++.. ++.++.. -+.-..-+...++-... ..+...+. ..+++++..+..
T Consensus 53 ~~la~~Aa~~aL~~ag~~~~dId~li~-~~~~~~~~~p~~a~~v~~~lgl~~~--~~~~~~v~-----~~C~~~~~al~~ 124 (329)
T PRK07204 53 SYMGAEAAKKAVEDAKLTLDDIDCIIC-ASGTIQQAIPCTASLIQEQLGLQHS--GIPCFDIN-----STCLSFITALDT 124 (329)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCccHHHHHHHHhCCCCC--CceEEEcc-----chhHHHHHHHHH
Confidence 345678999999999999999998753 3443321 12233334444432110 02222221 245666777766
Q ss_pred HHHHHhhCC
Q 040515 191 AVLTIHHGV 199 (251)
Q Consensus 191 ~~~~l~~~~ 199 (251)
+...++.+.
T Consensus 125 a~~~l~~g~ 133 (329)
T PRK07204 125 ISYAIECGR 133 (329)
T ss_pred HHHHHHCCC
Confidence 766666654
No 173
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=85.48 E-value=3 Score=36.86 Aligned_cols=79 Identities=15% Similarity=0.135 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHHHHc-CCCCCCccEEEecCCCCcCCc--HHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHH
Q 040515 112 GKGAILAMTRALKQS-GLQSHQVDYVNAHATSTPLGD--TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEA 188 (251)
Q Consensus 112 ~~~~~~a~~~al~~A-gi~~~dId~i~~h~~gt~~~D--~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l 188 (251)
.+-..++++++|+++ ||+++|||.+.. ++..+... ..-..-+....+-. ++|...+ +..++||+..+
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID~vv~-g~~~~~~~~g~~~~~~~a~~lGl~----~~p~~~v-----~~~caSG~~av 97 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDIDDLML-GCGLPGGEQGFNMARVVAVLLGYD----FLPGTTV-----NRYCSSSLQTT 97 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCEEEE-EcccccccccCCHHHHHHHHcCCC----CCCeeee-----eccchhHHHHH
Confidence 345678999999997 999999998865 32221111 10011111111110 1222222 34689999999
Q ss_pred HHHHHHHhhCCc
Q 040515 189 IFAVLTIHHGVA 200 (251)
Q Consensus 189 ~~~~~~l~~~~i 200 (251)
..+...++.|..
T Consensus 98 ~~Aa~~I~sG~~ 109 (406)
T PRK07851 98 RMAFHAIKAGEG 109 (406)
T ss_pred HHHHHHHHCCCC
Confidence 999999988754
No 174
>PRK07855 lipid-transfer protein; Provisional
Probab=84.58 E-value=7 Score=34.33 Aligned_cols=93 Identities=23% Similarity=0.224 Sum_probs=54.4
Q ss_pred EEEeeeeecCCCCCCCCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceee
Q 040515 91 AEVRGYGMSGDAHHITQPHID-GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAF 169 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~~~~~~-~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v 169 (251)
+.|.|++...-+.+ +... .+-..+++++||+.|||+++|||.+...... ... . ..+...++-.. ..++
T Consensus 6 v~IvG~g~t~~~r~---~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~--~-~~l~~~lGl~~---~~~~ 74 (386)
T PRK07855 6 AAIVGIGATEFSKN---SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNP--E-IAVARALGIGE---LKFF 74 (386)
T ss_pred EEEEEeeecccccC---CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--ccc--H-HHHHHHCCCCC---Ccce
Confidence 46788887543332 1222 3456789999999999999999988752211 111 1 11222222110 0121
Q ss_pred ecccCCccchhhhhhHHHHHHHHHHHhhCC
Q 040515 170 SSTKGAIGHLLGAAGAVEAIFAVLTIHHGV 199 (251)
Q Consensus 170 ~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 199 (251)
..+ +..+++|...+..+...++.|.
T Consensus 75 ~~v-----~~gg~sg~~~~~~A~~~I~sG~ 99 (386)
T PRK07855 75 SRI-----HYGGGAACATVQQAAMAVATGV 99 (386)
T ss_pred eee-----cCCcHHHHHHHHHHHHHHHCCC
Confidence 111 3457888888888988888774
No 175
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=84.55 E-value=8.3 Score=33.86 Aligned_cols=94 Identities=16% Similarity=0.134 Sum_probs=52.2
Q ss_pred EEEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcC-CCC-CCccEEEecCCCCcCCc--HHHHHHHHHHhhccCCCCc
Q 040515 91 AEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSG-LQS-HQVDYVNAHATSTPLGD--TVEATAIRTVFSDHATSGS 166 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Ag-i~~-~dId~i~~h~~gt~~~D--~~E~~a~~~~~~~~~~~~~ 166 (251)
+.|.|++...-+.+.. .....+...+++++||+.|| |++ +|||.+... +...... ..... +...++.. .
T Consensus 6 vaIvG~g~t~~~~~~~-~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~-~~~~~~~~~~~~~~-~~~~lg~~----~ 78 (385)
T PRK06066 6 VAIVGIGWYGFRPTTP-EVSFREMMFEAASRAYKDAGNINPRRDVDSFISC-QEDFWEGIAIADEF-APDQIGGA----M 78 (385)
T ss_pred EEEEEeeecCCcCCCC-CCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEe-cCcccCcccccchh-HHHHcccC----C
Confidence 4577877665442111 11124567889999999999 997 799987652 2111100 00001 11222221 0
Q ss_pred eeeecccCCccchhhhhhHHHHHHHHHHHhhCC
Q 040515 167 LAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGV 199 (251)
Q Consensus 167 ~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ 199 (251)
.|...+ +++|...+..++.+++.|.
T Consensus 79 ~~~~~v--------~~sg~~a~~~A~~aV~sG~ 103 (385)
T PRK06066 79 RPTMTV--------AGDGLQGLAHAVMHINSGL 103 (385)
T ss_pred CCeEEE--------eCcHHHHHHHHHHHHHcCC
Confidence 122221 5678888888999888874
No 176
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=84.55 E-value=4.9 Score=33.97 Aligned_cols=78 Identities=19% Similarity=0.120 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCC-cHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~-D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.+....+++++|+++|++++|||.+.. ++.++.. .+.-...+...++-. ..+...+ . ..+++|+..|..
T Consensus 53 ~~la~~A~~~al~~agl~~~~id~vi~-~~~~~~~~~~~~~~~i~~~lG~~----~~~~~~v----~-~~Casg~~al~~ 122 (319)
T PRK09352 53 SDLATEAAKKALEAAGIDPEDIDLIIV-ATTTPDYAFPSTACLVQARLGAK----NAAAFDL----S-AACSGFVYALST 122 (319)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCchHHHHHHHHhCCC----CCcEeec----c-ccchhHHHHHHH
Confidence 345678899999999999999998765 3333221 122222333333321 1232222 1 347788888888
Q ss_pred HHHHHhhCC
Q 040515 191 AVLTIHHGV 199 (251)
Q Consensus 191 ~~~~l~~~~ 199 (251)
+...++.|.
T Consensus 123 A~~~i~~g~ 131 (319)
T PRK09352 123 ADQFIRSGA 131 (319)
T ss_pred HHHHHHcCC
Confidence 888888764
No 177
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=84.41 E-value=8.1 Score=33.99 Aligned_cols=81 Identities=15% Similarity=0.108 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEec-CCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAH-ATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h-~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.+-...+++++|++++|+++|||.+..- .......+. . .+....+.... ...+|...+ +..++||+..+..
T Consensus 27 ~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~-~-~ar~~~l~~gl-~~~vP~~tV-----~~~CaSG~~Ai~~ 98 (390)
T PRK06504 27 ADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQAT-N-VARNAVLASKL-PESVPGTSI-----DRQCGSSQQALHF 98 (390)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccc-c-HHHHHHHHcCC-CCCCceEEE-----echhhHHHHHHHH
Confidence 3456788999999999999999987763 221110001 0 11111111111 112444444 4558999999999
Q ss_pred HHHHHhhCCc
Q 040515 191 AVLTIHHGVA 200 (251)
Q Consensus 191 ~~~~l~~~~i 200 (251)
++.+++.|..
T Consensus 99 A~~~I~sG~~ 108 (390)
T PRK06504 99 AAQAVMSGTM 108 (390)
T ss_pred HHHHHHCCCC
Confidence 9999998865
No 178
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=84.13 E-value=5.3 Score=35.61 Aligned_cols=80 Identities=18% Similarity=0.076 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecC-CCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHA-TSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~-~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.+-...+++++|+++|++++|||.+..-- .+. ..+...... ..+..... ...|..++ +..++||+..+..
T Consensus 32 ~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~-~~~~~~~r~--~~l~~gl~-~~~p~~~V-----~~~CaSG~~ai~~ 102 (427)
T PRK09268 32 QDMLTAALDGLVDRFGLQGERLGEVVAGAVLKH-SRDFNLTRE--CVLGSALS-PYTPAYDL-----QQACGTGLEAAIL 102 (427)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccC-CccccHHHH--HHHHcCCC-CCCceeee-----echhhHHHHHHHH
Confidence 34567889999999999999999877631 111 112111111 11111100 01233333 3468999999999
Q ss_pred HHHHHhhCCc
Q 040515 191 AVLTIHHGVA 200 (251)
Q Consensus 191 ~~~~l~~~~i 200 (251)
+..+++.|..
T Consensus 103 A~~~I~sG~~ 112 (427)
T PRK09268 103 VANKIALGQI 112 (427)
T ss_pred HHHHHHCCCC
Confidence 9999988764
No 179
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=84.05 E-value=7 Score=34.22 Aligned_cols=80 Identities=18% Similarity=0.174 Sum_probs=46.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCc-HHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD-TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D-~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.+...++++++|+++|++++|||.+... +.+...+ ..-+..+...++-.. .+|...+ +..+++|+..+..
T Consensus 23 ~~La~~A~~~AL~dAgl~~~dID~vi~~-~~~~~~~~~~~a~~v~~~lGl~~---~~~~~~v-----~~~c~s~~~al~~ 93 (386)
T cd00751 23 DDLGAAVIKALLERAGLDPEEVDDVIMG-NVLQAGEGQNPARQAALLAGLPE---SVPATTV-----NRVCGSGLQAVAL 93 (386)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCCEEEEE-eccCCCCCChHHHHHHHHcCCCC---CCchhhh-----ccccHHHHHHHHH
Confidence 4556789999999999999999998753 2221111 111111222222110 0222211 3457888888989
Q ss_pred HHHHHhhCCc
Q 040515 191 AVLTIHHGVA 200 (251)
Q Consensus 191 ~~~~l~~~~i 200 (251)
+...++.|..
T Consensus 94 A~~~I~sG~~ 103 (386)
T cd00751 94 AAQSIAAGEA 103 (386)
T ss_pred HHHHHHCCCC
Confidence 9888887753
No 180
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=83.97 E-value=5.1 Score=33.97 Aligned_cols=78 Identities=23% Similarity=0.145 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCc-CCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTP-LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~-~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.+....+++++|+++|++++|||++... +.++ ...+.-+.-+...++-. +.+...+ . ..+++|+..|..
T Consensus 54 ~~la~~A~~~al~~ag~~~~~Id~li~~-~~~~~~~~~~~a~~l~~~lg~~----~~~~~~v----~-~~C~~~~~al~~ 123 (325)
T PRK12879 54 SDLAIKAAERALARAGLDAEDIDLIIVA-TTTPDYLFPSTASQVQARLGIP----NAAAFDI----N-AACAGFLYGLET 123 (325)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-cCCCCCCCChHHHHHHHHhCCC----CCcEEEE----C-ccchHHHHHHHH
Confidence 4456789999999999999999987643 2221 11122222233333321 1122111 1 245677777777
Q ss_pred HHHHHhhCC
Q 040515 191 AVLTIHHGV 199 (251)
Q Consensus 191 ~~~~l~~~~ 199 (251)
+...|+.+.
T Consensus 124 A~~~l~~g~ 132 (325)
T PRK12879 124 ANGLITSGL 132 (325)
T ss_pred HHHHHHcCC
Confidence 877787653
No 181
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=83.82 E-value=1.1 Score=37.55 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=32.0
Q ss_pred chhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCc
Q 040515 7 VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 41 (251)
Q Consensus 7 ~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~ 41 (251)
..||++|+.+|..|.++++.-....+||+.+|..+
T Consensus 142 GMGCsAgliai~lA~~lL~~~p~~~ALVVstE~~s 176 (290)
T PF08392_consen 142 GMGCSAGLIAIDLAKDLLQAHPNSYALVVSTENIS 176 (290)
T ss_pred CCcchhhHHHHHHHHHHHHhCCCcEEEEEEEeecc
Confidence 35899999999999999999999999999999844
No 182
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=83.58 E-value=8.5 Score=34.01 Aligned_cols=82 Identities=20% Similarity=0.171 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 191 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~ 191 (251)
.+-...+++++|+++||+++|||.+..--......+.... +...+.... ....+|..++ +..++||+..+..+
T Consensus 27 ~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~-ar~~~~~~G-lp~~~p~~tV-----~~~CaSG~~Ai~~A 99 (401)
T PRK08131 27 DDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNV-ARNALLLAG-LPVTVPGQTV-----NRLCASGLAAVIDA 99 (401)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccH-HHHHHHhcC-CCCCCceeee-----echhhhHHHHHHHH
Confidence 3456788999999999999999987663221000110001 111111111 1111444444 34689999999999
Q ss_pred HHHHhhCCc
Q 040515 192 VLTIHHGVA 200 (251)
Q Consensus 192 ~~~l~~~~i 200 (251)
..+++.|..
T Consensus 100 ~~~I~sG~~ 108 (401)
T PRK08131 100 ARAITCGEG 108 (401)
T ss_pred HHHHHCCCC
Confidence 999997764
No 183
>PLN02192 3-ketoacyl-CoA synthase
Probab=83.51 E-value=4.8 Score=36.62 Aligned_cols=76 Identities=8% Similarity=0.074 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHH
Q 040515 115 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLT 194 (251)
Q Consensus 115 ~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~ 194 (251)
...+++++|+++|++|+|||++....+ .-.--+.-+.-+..-++-+.. +.-- .++....++|+..+-.+-..
T Consensus 180 ~~~Aa~~aL~kaGi~p~DIDiLIv~~S-~~~~~PSlaa~I~n~lGlr~~---i~af----dLsgmGCSggl~aLdlA~~l 251 (511)
T PLN02192 180 MFGAIDQLLAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGN---ILSY----NLGGMGCSAGLISIDLAKHL 251 (511)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECC-CCCCCchHHHHHHHHhCCCCC---ceEE----EcccchhhhHHHHHHHHHHH
Confidence 346788999999999999999987633 222223333434444442211 1111 23344566777777666666
Q ss_pred HhhC
Q 040515 195 IHHG 198 (251)
Q Consensus 195 l~~~ 198 (251)
|+.+
T Consensus 252 L~a~ 255 (511)
T PLN02192 252 LQVH 255 (511)
T ss_pred HHcC
Confidence 6654
No 184
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=83.50 E-value=11 Score=33.49 Aligned_cols=79 Identities=9% Similarity=0.011 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhh-ccCCCCceeeecccCCccchhhhhhHHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS-DHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 191 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~-~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~ 191 (251)
+-...+++++|+++||+|+|||.+..--. ...+.. ..+.+... .......+|..++ +..++||+..+..+
T Consensus 31 eL~~~a~~~al~~agl~~~~ID~vi~G~~-~~~~~~---~~~ar~~a~~aGl~~~~P~~tV-----~~aCaSG~~Ai~~A 101 (428)
T PRK08963 31 DLGKMVVGELLARSEIDPELIEQLVFGQV-VQMPEA---PNIAREIVLGTGMNVHTDAYSV-----SRACATSFQAVANV 101 (428)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecc-CCCCCc---cHHHHHHHHHCCCCCCCcceee-----hhhhHHHHHHHHHH
Confidence 44578999999999999999998766421 111110 11111110 0000001344333 34689999999999
Q ss_pred HHHHhhCCc
Q 040515 192 VLTIHHGVA 200 (251)
Q Consensus 192 ~~~l~~~~i 200 (251)
+..++.|..
T Consensus 102 a~~I~sG~~ 110 (428)
T PRK08963 102 AESIMAGTI 110 (428)
T ss_pred HHHHHCCCC
Confidence 999987754
No 185
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=83.35 E-value=3.7 Score=35.54 Aligned_cols=78 Identities=19% Similarity=0.137 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAV 192 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~ 192 (251)
....++++++|+++|++++|||++... +.+....+.-..-+...++-.. .++... +.+..+++++..|..+.
T Consensus 87 ~la~~Aa~~aL~~a~~~~~~Id~li~~-s~~~~~~P~~a~~i~~~lgl~~---~~~~~d----v~~~~C~~~~~al~~A~ 158 (361)
T cd00831 87 ELAEEAARGALDEAGLRPSDIDHLVVN-TSTGNPTPSLDAMLINRLGLRP---DVKRYN----LGGMGCSAGAIALDLAK 158 (361)
T ss_pred HHHHHHHHHHHHHhCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCCCc---ccchhc----cccccchhHHHHHHHHH
Confidence 345688999999999999999998753 3343333333333333333210 011111 22234566677776666
Q ss_pred HHHhhC
Q 040515 193 LTIHHG 198 (251)
Q Consensus 193 ~~l~~~ 198 (251)
..++.+
T Consensus 159 ~~~~~~ 164 (361)
T cd00831 159 DLLEAN 164 (361)
T ss_pred HHHHHC
Confidence 666654
No 186
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=83.13 E-value=5.1 Score=34.99 Aligned_cols=78 Identities=19% Similarity=0.219 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCc-CCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTP-LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~-~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.+...++++++|+++|++++|||.+... +.++ ...+.-...+...++-. +.+... + ...+++|+..+..
T Consensus 64 ~~La~~A~~~aL~~agi~~~dId~li~~-s~~~~~~~p~~a~~v~~~Lgl~----~~~~~~----v-~~~Cas~~~al~~ 133 (378)
T PRK06816 64 AQMAAEAIRDLLDDAGFSLGDIELLACG-TSQPDQLMPGHASMVHGELGAP----PIEVVS----S-AGVCAAGMMALKY 133 (378)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-ECCCCcCChHHHHHHHhhCCCC----CCceee----e-cCcCHHHHHHHHH
Confidence 3456788999999999999999987653 3222 12222222233333211 122211 1 2336788888888
Q ss_pred HHHHHhhCC
Q 040515 191 AVLTIHHGV 199 (251)
Q Consensus 191 ~~~~l~~~~ 199 (251)
+...++.+.
T Consensus 134 A~~~i~sg~ 142 (378)
T PRK06816 134 AYLSVKAGE 142 (378)
T ss_pred HHHHHHCCC
Confidence 877777654
No 187
>PRK04262 hypothetical protein; Provisional
Probab=83.09 E-value=4.1 Score=35.11 Aligned_cols=79 Identities=18% Similarity=0.214 Sum_probs=45.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCc-HHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD-TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D-~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.+....+++++|+++|++++|||.+.. ++.++... +.-+.-+...++-. ...+... + ...+++++..+..
T Consensus 52 ~~la~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~~p~~a~~v~~~Lgl~---~~~~~~d----v-~~~C~~~~~aL~~ 122 (347)
T PRK04262 52 ATIAVEAARNALKRAGIDPKEIGAVYV-GSESHPYAVKPTATIVAEALGAT---PDLTAAD----L-EFACKAGTAALQA 122 (347)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EecCCCcccccHHHHHHHHcCCC---CCceEEE----H-HHhHHHHHHHHHH
Confidence 456678999999999999999999864 33333211 11112222222211 0122111 1 2356777788888
Q ss_pred HHHHHhhCC
Q 040515 191 AVLTIHHGV 199 (251)
Q Consensus 191 ~~~~l~~~~ 199 (251)
+...++.+.
T Consensus 123 A~~~i~sg~ 131 (347)
T PRK04262 123 AMGLVKSGM 131 (347)
T ss_pred HHHHHHcCC
Confidence 888887654
No 188
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=82.83 E-value=4.9 Score=34.66 Aligned_cols=79 Identities=14% Similarity=0.158 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCc-HHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD-TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D-~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.+...++++++|+++|++++|||.+.. ++.++... +.-+.-+...++-.. . .+... + ...+++++..+..
T Consensus 51 ~~la~~Aa~~aL~~agl~~~dID~li~-~s~~~~~~~p~~a~~v~~~LGl~~-~--~~~~d----v-~~aC~g~~~al~~ 121 (345)
T TIGR00748 51 ATIGVEAARNALKRAKIDPKDIGAVYV-GSESHPYAVKPTATIVAEAIGATP-D--LTAAD----L-EFACKAGTAGIQA 121 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EecCCCccccchHHHHHHHcCCCC-C--ceEEE----H-HHhHHHHHHHHHH
Confidence 456678999999999999999999875 34333211 112222333333210 0 11111 1 1234446777777
Q ss_pred HHHHHhhCC
Q 040515 191 AVLTIHHGV 199 (251)
Q Consensus 191 ~~~~l~~~~ 199 (251)
+...++.|.
T Consensus 122 A~~~i~sg~ 130 (345)
T TIGR00748 122 CMGLVASGM 130 (345)
T ss_pred HHHHHHcCC
Confidence 777777764
No 189
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=82.59 E-value=4.5 Score=35.34 Aligned_cols=78 Identities=19% Similarity=0.103 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 191 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~ 191 (251)
.+...++++++|+++|++++|||++... +.+...-..-...+...++-. ..+...+. ..+++++..|..+
T Consensus 97 ~~La~~Aa~~aL~~agi~~~dId~li~~-s~~~~~~~~~a~~v~~~LG~~----~~~~~dv~-----~~Ca~~~~aL~~A 166 (379)
T PLN02326 97 TSLAVEAAKKALEMAGVDPEDVDLVLLC-TSSPDDLFGSAPQVQAALGCT----NALAFDLT-----AACSGFVLGLVTA 166 (379)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCccCcHHHHHHHHhCCC----CCceeecc-----ccchHHHHHHHHH
Confidence 3456789999999999999999987653 222211111122233434321 12322222 2467777777777
Q ss_pred HHHHhhCC
Q 040515 192 VLTIHHGV 199 (251)
Q Consensus 192 ~~~l~~~~ 199 (251)
...++.+.
T Consensus 167 ~~~l~~g~ 174 (379)
T PLN02326 167 ARFIRGGG 174 (379)
T ss_pred HHHHHcCC
Confidence 77777664
No 190
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=82.48 E-value=9.4 Score=33.54 Aligned_cols=79 Identities=10% Similarity=0.098 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH--h-hccCCCCceeeecccCCccchhhhhhHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV--F-SDHATSGSLAFSSTKGAIGHLLGAAGAVEA 188 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~--~-~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l 188 (251)
.+-...+++++|+++|++|+|||.+..--.. ..+.. ...+.+. + .... ..+|...+ +..++||+..+
T Consensus 27 ~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~-~~~~q--~~~~ar~~~l~~Gl~--~~~p~~tV-----~~~CaSG~~A~ 96 (387)
T PRK07850 27 AELLGAVQRAVLDRAGIDPGDVEQVIGGCVT-QAGEQ--SNNITRTAWLHAGLP--YHVGATTI-----DCQCGSAQQAN 96 (387)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecc-ccccc--cchHHHHHHHhCCCC--CCCceEEE-----ecccccHHHHH
Confidence 3445788999999999999999987764221 11110 0001111 1 1110 01333333 45589999999
Q ss_pred HHHHHHHhhCCc
Q 040515 189 IFAVLTIHHGVA 200 (251)
Q Consensus 189 ~~~~~~l~~~~i 200 (251)
..++..++.|..
T Consensus 97 ~~A~~~I~sG~~ 108 (387)
T PRK07850 97 HLVAGLIAAGAI 108 (387)
T ss_pred HHHHHHHHCCCC
Confidence 999999998765
No 191
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=82.37 E-value=5.9 Score=34.87 Aligned_cols=79 Identities=16% Similarity=0.092 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCc-HH-HHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD-TV-EATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAI 189 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D-~~-E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~ 189 (251)
.+....+++++|++++|+|+|||.|... +...... .. -..++....+.. ..|...+ ...++||+..+.
T Consensus 24 ~el~~~a~~~Al~~agl~p~dID~vi~g-~~~~~~~g~~~~~~~~~~~lg~~----~~p~~~V-----~~~Casg~~al~ 93 (393)
T cd00826 24 HEAGAKAIAAALEPAGVAAGAVEEACLG-QVLGAGEGQNCAQQAAMHAGGLQ----EAPAIGM-----NNLCGSGLRALA 93 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-EccCCcccCcHHHHHHHHcCCCC----CCcEEEe-----cchhHHHHHHHH
Confidence 4566788999999999999999987653 2221110 11 111122211211 1333333 346789999999
Q ss_pred HHHHHHhhCCc
Q 040515 190 FAVLTIHHGVA 200 (251)
Q Consensus 190 ~~~~~l~~~~i 200 (251)
.+...++.|..
T Consensus 94 ~A~~~I~sG~~ 104 (393)
T cd00826 94 LAMQLIAGGDA 104 (393)
T ss_pred HHHHHHHCCCC
Confidence 99999988754
No 192
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=81.81 E-value=10 Score=33.81 Aligned_cols=99 Identities=10% Similarity=-0.001 Sum_probs=56.5
Q ss_pred EEEeeeeecCCCCCC-CCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHH--h-hccCCCC
Q 040515 91 AEVRGYGMSGDAHHI-TQPHID-GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTV--F-SDHATSG 165 (251)
Q Consensus 91 a~i~g~~~~~~~~~~-~~~~~~-~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~--~-~~~~~~~ 165 (251)
++|.|.+..--+... ...+.. .+-...+++++|++++|+++|||.+..--. ...+.. ..+.+. + ... ..
T Consensus 9 V~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~-~~~~~~---~~~ar~~~l~aGl--~~ 82 (430)
T TIGR02446 9 IAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQV-VQMPEA---PNIAREIVLGTGM--NV 82 (430)
T ss_pred EEEEecccCccccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEec-cCcCcc---chHHHHHHHhCCC--CC
Confidence 456666655444321 111222 345578999999999999999998766311 111110 111111 1 111 01
Q ss_pred ceeeecccCCccchhhhhhHHHHHHHHHHHhhCCc
Q 040515 166 SLAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVA 200 (251)
Q Consensus 166 ~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~i 200 (251)
.+|...+ +..++||+..+..++.+++.|..
T Consensus 83 ~~p~~~V-----~~~CaSG~~A~~~a~~~I~sG~~ 112 (430)
T TIGR02446 83 HTDAYSV-----TRACATSFQSAVNVAESIMAGAI 112 (430)
T ss_pred CCchhhh-----hhhhhHHHHHHHHHHHHHHCCCC
Confidence 1344333 45589999999999999997753
No 193
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=81.72 E-value=6.8 Score=34.06 Aligned_cols=77 Identities=17% Similarity=0.100 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcC-CcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPL-GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 191 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~-~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~ 191 (251)
.....+++++|+++|++++|||.+... +.++. ..+.-+..+...++-. .+...+ ...+++|+..+..+
T Consensus 97 ~la~~Aa~~aL~~agl~~~~Id~li~~-~~~~~~~~p~~a~~v~~~Lgl~-----~~~~~v-----~~aCasg~~al~~A 165 (372)
T PRK07515 97 EMGVAAARQALARAGRTAEDIDAVIVA-CSNMQRAYPAMAIEIQQALGIE-----GFAFDM-----NVACSSATFGIQTA 165 (372)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCcHHHHHHHHhcCCC-----CcEEEe-----cchhHHHHHHHHHH
Confidence 345678999999999999999987653 33321 1111122233333321 122111 23578888888888
Q ss_pred HHHHhhCCc
Q 040515 192 VLTIHHGVA 200 (251)
Q Consensus 192 ~~~l~~~~i 200 (251)
...++.|..
T Consensus 166 ~~~i~~g~~ 174 (372)
T PRK07515 166 ANAIRSGSA 174 (372)
T ss_pred HHHHHcCCC
Confidence 888887653
No 194
>PLN03172 chalcone synthase family protein; Provisional
Probab=81.38 E-value=7.1 Score=34.37 Aligned_cols=74 Identities=11% Similarity=0.031 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE-ecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccC-CccchhhhhhHHHHHHHH
Q 040515 115 AILAMTRALKQSGLQSHQVDYVN-AHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKG-AIGHLLGAAGAVEAIFAV 192 (251)
Q Consensus 115 ~~~a~~~al~~Agi~~~dId~i~-~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~-~~Gh~~~AsG~~~l~~~~ 192 (251)
-.+++++||+++|++++|||+|. +..|+.. -+.-..-+...++-... ++. ...+..+++++..|-.+.
T Consensus 106 a~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~--~P~~a~~l~~~LGl~~~--------~~~~~~~~~gC~g~~~aL~~A~ 175 (393)
T PLN03172 106 GKEAAAKAIKEWGQPKSKITHLVFCTTSGVD--MPGADYQLTKLLGLKPS--------VKRFMMYQQGCFAGGTVLRLAK 175 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEccCCCc--CchHHHHHHHHhCCCCC--------ceEEeeeCCchHHHHHHHHHHH
Confidence 35788999999999999999875 4434421 22222223333332110 111 122345566666776666
Q ss_pred HHHhhC
Q 040515 193 LTIHHG 198 (251)
Q Consensus 193 ~~l~~~ 198 (251)
..++.+
T Consensus 176 ~~~~~~ 181 (393)
T PLN03172 176 DLAENN 181 (393)
T ss_pred HHHHcC
Confidence 666654
No 195
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=81.34 E-value=1 Score=38.33 Aligned_cols=28 Identities=21% Similarity=0.379 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEec
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAH 139 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h 139 (251)
...-.++.++||++||++|+|||+|..-
T Consensus 53 s~la~~Aa~~AL~~Agi~~~dIDlII~a 80 (323)
T COG0332 53 SDLAVEAARKALEDAGISPDDIDLIIVA 80 (323)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 3456789999999999999999998875
No 196
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=81.01 E-value=7.5 Score=32.84 Aligned_cols=78 Identities=17% Similarity=0.201 Sum_probs=46.0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCC-cHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~-D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.+....+++++|+++|++++|||.+..- +.+... .+.-..-+...++-. ..+...+ +..+++|+..+..
T Consensus 49 ~~l~~~a~~~aL~~ag~~~~~Id~li~~-~~~~~~~~~~~~~~i~~~lg~~----~~~~~~v-----~~~C~s~~~al~~ 118 (324)
T cd00827 49 PTMAVEAARRALERAGIDPDDIGLLIVA-TESPIDKGKSAATYLAELLGLT----NAEAFDL-----KQACYGGTAALQL 118 (324)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-cCCCCCCCccHHHHHHHHcCCC----CCceeeh-----hhhhHHHHHHHHH
Confidence 4566789999999999999999998752 322221 111122233333221 1121111 1345677888888
Q ss_pred HHHHHhhCC
Q 040515 191 AVLTIHHGV 199 (251)
Q Consensus 191 ~~~~l~~~~ 199 (251)
+...++.+.
T Consensus 119 A~~~i~~g~ 127 (324)
T cd00827 119 AANLVESGP 127 (324)
T ss_pred HHHHHHcCC
Confidence 888887765
No 197
>PLN00415 3-ketoacyl-CoA synthase
Probab=80.93 E-value=8.4 Score=34.62 Aligned_cols=77 Identities=12% Similarity=0.134 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHH
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVL 193 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~ 193 (251)
.+..+.+++|+++|++|+|||++....++... -+.-...+...++-+..-.... ++....++|+.++-.+-.
T Consensus 137 ~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~-~Pslaa~l~~~LGLr~~v~~~d-------L~gmGCsggv~aL~lA~~ 208 (466)
T PLN00415 137 VIFGALNSLFKKTGIEPREVGIFIVNCSLFNP-NPSLSSMIVNRYKLKTDVKTYN-------LSGMGCSAGAISVDLATN 208 (466)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECcCCCC-CchHHHHHHHHhCCCCCceEEE-------eccccchHHHHHHHHHHH
Confidence 45567889999999999999998776554311 2333333444443221101122 223345566666666666
Q ss_pred HHhhC
Q 040515 194 TIHHG 198 (251)
Q Consensus 194 ~l~~~ 198 (251)
.++.+
T Consensus 209 ll~a~ 213 (466)
T PLN00415 209 LLKAN 213 (466)
T ss_pred HHHhC
Confidence 66553
No 198
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=80.86 E-value=6 Score=34.82 Aligned_cols=81 Identities=12% Similarity=0.026 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEec-CCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAH-ATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h-~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.+-...+++++|+++|++++|||.|..- .......-..-+..+....+- ...+|...+ +..++||+..+..
T Consensus 28 ~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl---~~~~p~~~V-----~~aCaSg~~Al~~ 99 (392)
T PRK07108 28 ATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGL---PVTVPGMTV-----NRFCSSGLQTIAL 99 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCC---CCCCceeee-----cchhhHHHHHHHH
Confidence 3456789999999999999999987653 221111001111111111111 011333333 4558999999999
Q ss_pred HHHHHhhCCc
Q 040515 191 AVLTIHHGVA 200 (251)
Q Consensus 191 ~~~~l~~~~i 200 (251)
+..+++.|..
T Consensus 100 A~~~I~sG~~ 109 (392)
T PRK07108 100 AAQRVIAGEG 109 (392)
T ss_pred HHHHHHCCCC
Confidence 9999998764
No 199
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=80.67 E-value=7.2 Score=33.88 Aligned_cols=78 Identities=19% Similarity=0.161 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCC-cHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~-D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.+...++++++|+++|++++|||.+... +..... ......-+...++-. +.+...+ ...+++|+..+..
T Consensus 17 ~eL~~~A~~~Al~dagl~~~~Id~vi~g-~~~~~~~~~~~a~~va~~lGl~----~~~~~~v-----~~~c~sg~~al~~ 86 (375)
T cd00829 17 LELAAEAARAALDDAGLEPADIDAVVVG-NAAGGRFQSFPGALIAEYLGLL----GKPATRV-----EAAGASGSAAVRA 86 (375)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEe-cccccccccchHHHHHHHcCCC----CcceeeE-----eCccHHHHHHHHH
Confidence 3456788999999999999999988753 221111 011112122222211 1222211 3457888888999
Q ss_pred HHHHHhhCC
Q 040515 191 AVLTIHHGV 199 (251)
Q Consensus 191 ~~~~l~~~~ 199 (251)
+...++.|.
T Consensus 87 Aa~~I~sG~ 95 (375)
T cd00829 87 AAAAIASGL 95 (375)
T ss_pred HHHHHHhCC
Confidence 998888874
No 200
>PRK06840 hypothetical protein; Validated
Probab=80.46 E-value=8 Score=33.07 Aligned_cols=76 Identities=18% Similarity=0.034 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCc--CCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTP--LGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAI 189 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~--~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~ 189 (251)
.+...++++++|+++|++|+|||++....+.++ .... -..-+...++-.. .+...+ .+ .+++++..+.
T Consensus 54 ~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~-~a~~l~~~lGl~~----~~~~~v----~~-~C~~~~~al~ 123 (339)
T PRK06840 54 SDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWS-SAPKIQHEIGAKN----AWAFDI----MA-VCASFPIALK 123 (339)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCc-hHHHHHHHhCCCC----cccccc----cc-cchHHHHHHH
Confidence 456678999999999999999999864322111 1111 1222333333211 222211 22 3566777777
Q ss_pred HHHHHHhh
Q 040515 190 FAVLTIHH 197 (251)
Q Consensus 190 ~~~~~l~~ 197 (251)
.+...++.
T Consensus 124 ~A~~~l~~ 131 (339)
T PRK06840 124 VAKDLLYS 131 (339)
T ss_pred HHHHHHhc
Confidence 77777765
No 201
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=80.41 E-value=9.7 Score=33.38 Aligned_cols=79 Identities=18% Similarity=0.158 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCc--C-CcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTP--L-GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEA 188 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~--~-~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l 188 (251)
.+...++++++|+++|++++|||.+... +..+ . ....-..-+...++-. ..+...+ ...+++|+..+
T Consensus 23 ~eLa~~a~~~Al~dagl~~~~Id~vi~g-~~~~~~~~~~~~~a~~va~~lGl~----~~~~~~v-----~~aCasg~~ai 92 (389)
T PRK06064 23 RDLAVEAGLEALEDAGIDGKDIDAMYVG-NMSAGLFVSQEHIAALIADYAGLA----PIPATRV-----EAACASGGAAL 92 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccccccccccHHHHHHHHcCCC----CCCeeEE-----eCCcHHHHHHH
Confidence 3456788999999999999999988753 2211 1 0111111112222211 0122211 23477888888
Q ss_pred HHHHHHHhhCCc
Q 040515 189 IFAVLTIHHGVA 200 (251)
Q Consensus 189 ~~~~~~l~~~~i 200 (251)
..+...++.|..
T Consensus 93 ~~A~~~I~sG~~ 104 (389)
T PRK06064 93 RQAYLAVASGEA 104 (389)
T ss_pred HHHHHHHHCCCC
Confidence 889888887764
No 202
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=80.33 E-value=6 Score=34.83 Aligned_cols=79 Identities=13% Similarity=0.083 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEec-CCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAH-ATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 191 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h-~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~ 191 (251)
+-...+++++|+++||+++|||.+..- ......+...-..+. ..... ...+|...+ +..++||+..+..+
T Consensus 29 ~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~--~~~Gl--~~~~p~~~V-----~~~CaSG~~Ai~~A 99 (392)
T PRK06633 29 MLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTL--IHAGI--PKEVPGYTI-----NKVCGSGLKSVALA 99 (392)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHH--HHCCC--CCCccchhh-----cchhHHHHHHHHHH
Confidence 455788999999999999999987763 222111221111111 11111 112454444 34689999999999
Q ss_pred HHHHhhCCc
Q 040515 192 VLTIHHGVA 200 (251)
Q Consensus 192 ~~~l~~~~i 200 (251)
...++.|..
T Consensus 100 ~~~I~sG~~ 108 (392)
T PRK06633 100 ANSIMTGDN 108 (392)
T ss_pred HHHHHcCCC
Confidence 999987764
No 203
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=80.09 E-value=3.8 Score=34.84 Aligned_cols=70 Identities=19% Similarity=0.247 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHcCC-CCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHH
Q 040515 113 KGAILAMTRALKQSGL-QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 191 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi-~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~ 191 (251)
...+.++++++++||| +|+||-||..-..=-.. ..+... ..++..+.....-..++..-||| .++++.+
T Consensus 132 ~~vA~aV~~aM~~AGI~dpaDVH~VQvKcPLLT~------~~i~~A---~~RG~~~~t~dt~~SM~~SrgAS-ALGvAvA 201 (365)
T PF09663_consen 132 EEVAAAVRAAMADAGITDPADVHFVQVKCPLLTS------ERIADA---KARGKTVATEDTYESMAYSRGAS-ALGVAVA 201 (365)
T ss_pred HHHHHHHHHHHHHcCCCChhheeeEEecCCcCCH------HHHHHH---HhCCCceeecccccccccccchh-HHHHHHH
Confidence 4567889999999999 79999999998432211 112221 12222244444455788888888 5566666
Q ss_pred H
Q 040515 192 V 192 (251)
Q Consensus 192 ~ 192 (251)
+
T Consensus 202 L 202 (365)
T PF09663_consen 202 L 202 (365)
T ss_pred h
Confidence 4
No 204
>PLN03170 chalcone synthase; Provisional
Probab=79.89 E-value=5.1 Score=35.37 Aligned_cols=29 Identities=14% Similarity=0.156 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEE-ecCCC
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVN-AHATS 142 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~-~h~~g 142 (251)
.-.+++++||+++|++++|||+|. +..++
T Consensus 109 La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg 138 (401)
T PLN03170 109 LGKAAAQKAIKEWGQPKSKITHLVFCTTSG 138 (401)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEccCC
Confidence 345788999999999999999864 44444
No 205
>PLN03173 chalcone synthase; Provisional
Probab=79.87 E-value=5.4 Score=35.11 Aligned_cols=24 Identities=17% Similarity=0.141 Sum_probs=20.7
Q ss_pred HHHHHHHHHHcCCCCCCccEEEec
Q 040515 116 ILAMTRALKQSGLQSHQVDYVNAH 139 (251)
Q Consensus 116 ~~a~~~al~~Agi~~~dId~i~~h 139 (251)
.+++++||+++|++++|||+|...
T Consensus 107 ~~Aa~~AL~~ag~~~~dId~li~~ 130 (391)
T PLN03173 107 KEAAAKAIKEWGQPKSKITHLVFC 130 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEE
Confidence 478899999999999999987543
No 206
>TIGR02714 amido_AtzD_TrzD ring-opening amidohydrolases. Members of this family are are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC 3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC 3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyzes the ring-opening of barbituric acid to ureidomalonic acid (see Soong, et al., PubMed:11485332).
Probab=79.86 E-value=3.9 Score=34.72 Aligned_cols=70 Identities=20% Similarity=0.341 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHcCC-CCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHH
Q 040515 113 KGAILAMTRALKQSGL-QSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 191 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi-~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~ 191 (251)
...+.++++++++||| +|+||-||+.-..=-.. | .+... ..++..+...-.-..+|..-||| .++++.+
T Consensus 133 ~~vA~aV~~AM~~AGI~dpaDVH~VQvKcPlLt~----~--~i~~A---~~RG~~~~t~dt~~SM~~SrgaS-ALGvAvA 202 (366)
T TIGR02714 133 TETAAAVKRAMRDAGIADPADVHFVQVKCPLLTI----H--TIRDA---KSRGKTVWTEDTYESMGYSRGAS-ALGIALA 202 (366)
T ss_pred HHHHHHHHHHHHHcCCCChhHeeEEEecCcccCH----H--HHHHH---HhcCCceeecCcccccccccchh-HHHHHHH
Confidence 3556789999999999 79999999998542221 1 11111 11222344544555788888888 4465555
Q ss_pred H
Q 040515 192 V 192 (251)
Q Consensus 192 ~ 192 (251)
+
T Consensus 203 L 203 (366)
T TIGR02714 203 L 203 (366)
T ss_pred h
Confidence 4
No 207
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=79.74 E-value=4.1 Score=32.85 Aligned_cols=24 Identities=21% Similarity=0.394 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEe
Q 040515 115 AILAMTRALKQSGLQSHQVDYVNA 138 (251)
Q Consensus 115 ~~~a~~~al~~Agi~~~dId~i~~ 138 (251)
....++.+|++++++++|||+|.-
T Consensus 53 il~Lv~~al~ea~v~~~diD~icy 76 (336)
T KOG2708|consen 53 ILGLVKQALEEAGVTSDDIDCICY 76 (336)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEE
Confidence 345678999999999999999864
No 208
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=79.55 E-value=9 Score=32.29 Aligned_cols=78 Identities=21% Similarity=0.138 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCC-cHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTPLG-DTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~-D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
.+....+++++|+++|++++|||.+.. ++.++.. .+.-...+...++-. +.+...+ ...+++|+..+..
T Consensus 51 ~~la~~A~~~al~~ag~~~~~Id~li~-~~~~~~~~~~~~~~~l~~~lg~~----~~~~~~v-----~~~C~s~~~al~~ 120 (320)
T cd00830 51 SDLAVEAAKKALEDAGIDADDIDLIIV-ATSTPDYLFPATACLVQARLGAK----NAAAFDI-----NAACSGFLYGLST 120 (320)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCCcHHHHHHHHhCCC----CCcEeec-----cccchHHHHHHHH
Confidence 445678999999999999999998854 3433221 111222233333321 1222222 1346777888888
Q ss_pred HHHHHhhCC
Q 040515 191 AVLTIHHGV 199 (251)
Q Consensus 191 ~~~~l~~~~ 199 (251)
+...++.+.
T Consensus 121 A~~~i~~g~ 129 (320)
T cd00830 121 AAGLIRSGG 129 (320)
T ss_pred HHHHHHcCC
Confidence 888887764
No 209
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=79.44 E-value=14 Score=33.71 Aligned_cols=99 Identities=14% Similarity=0.023 Sum_probs=56.0
Q ss_pred EEEeeeeecCCCCCCCCC-CCChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCC-cCCcHHHHHHHHHHhhccCCCCc
Q 040515 91 AEVRGYGMSGDAHHITQP-HIDGKGAILAMTRALKQSGLQ--SHQVDYVNAHATST-PLGDTVEATAIRTVFSDHATSGS 166 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~~~-~~~~~~~~~a~~~al~~Agi~--~~dId~i~~h~~gt-~~~D~~E~~a~~~~~~~~~~~~~ 166 (251)
.+|.|++....+...... ....+-..+++++||++||++ ++|||.+..-.... ...+. . ..+...++-. +
T Consensus 6 ~~IVGvG~t~~~~~~~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~-~-~~la~~lGl~----p 79 (498)
T PRK08257 6 PVIVGVGQVTERPDDPAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDP-P-GLLAERLGAD----P 79 (498)
T ss_pred EEEEEeeecccccCCcccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCH-H-HHHHHHcCCC----C
Confidence 457888876554321110 012356678999999999999 99999876421111 11122 1 1122222211 1
Q ss_pred eeeecccCCccchhhhhhHHHHHHHHHHHhhCCc
Q 040515 167 LAFSSTKGAIGHLLGAAGAVEAIFAVLTIHHGVA 200 (251)
Q Consensus 167 ~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~~~~i 200 (251)
.+.. ..+..|.++...+..++..+..|.-
T Consensus 80 ~~~~-----~~~~GG~s~~~~v~~Aa~~IasG~a 108 (498)
T PRK08257 80 ARTV-----YSPVGGNSPQRLVNEAALRIAAGEA 108 (498)
T ss_pred ccee-----EecCCCHHHHHHHHHHHHHHHCCCC
Confidence 1111 1345677888888899999887753
No 210
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=79.41 E-value=8.1 Score=33.90 Aligned_cols=80 Identities=14% Similarity=0.017 Sum_probs=45.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCC-CCcCCc-HHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHAT-STPLGD-TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAI 189 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~-gt~~~D-~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~ 189 (251)
.+-..++++++|+++||+++|||.|..--+ +....+ ......+....+- . ..|...+ +..++||+..+.
T Consensus 23 ~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl--~--~~p~~~v-----~~~CaSg~~Al~ 93 (389)
T PRK07516 23 ESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPAL--R--FKPATRV-----ENACATGSAAVY 93 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCC--C--CCceeee-----ccccHHHHHHHH
Confidence 345678999999999999999998765211 111111 1111111111110 0 1221111 345788999999
Q ss_pred HHHHHHhhCCc
Q 040515 190 FAVLTIHHGVA 200 (251)
Q Consensus 190 ~~~~~l~~~~i 200 (251)
.+...++.|..
T Consensus 94 ~A~~~I~sG~~ 104 (389)
T PRK07516 94 AALDAIEAGRA 104 (389)
T ss_pred HHHHHHHCCCC
Confidence 99999988753
No 211
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=79.37 E-value=9.5 Score=32.39 Aligned_cols=32 Identities=31% Similarity=0.305 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCCc
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATSTP 144 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~ 144 (251)
.....++++++|+++|++++|||++.. ++.++
T Consensus 53 ~~la~~Aa~~aL~~ag~~~~~Id~li~-~t~~~ 84 (326)
T PRK05963 53 SDLAASAGDMALSDAGIERSDIALTLL-ATSTP 84 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCC
Confidence 345678999999999999999999874 34443
No 212
>PLN03171 chalcone synthase-like protein; Provisional
Probab=79.34 E-value=4.9 Score=35.44 Aligned_cols=30 Identities=17% Similarity=0.125 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCc
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAHATSTP 144 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h~~gt~ 144 (251)
.-.++.+++|+++|++++|||.|... |.|.
T Consensus 111 la~~Aa~~aL~~ag~~~~dId~li~~-t~t~ 140 (399)
T PLN03171 111 LAAEAAKKAIAEWGRPAADITHLVVT-TNSG 140 (399)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEE-cCCC
Confidence 44678999999999999999998753 4443
No 213
>PLN03169 chalcone synthase family protein; Provisional
Probab=77.33 E-value=5.8 Score=34.90 Aligned_cols=26 Identities=15% Similarity=0.046 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEec
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAH 139 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h 139 (251)
.-.++++++|+++|++++|||++...
T Consensus 109 La~~Aa~~aL~~ag~~~~dId~lI~~ 134 (391)
T PLN03169 109 MAVEASLACIKEWGRPVSDITHLVYV 134 (391)
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEEE
Confidence 34678999999999999999987644
No 214
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=75.81 E-value=20 Score=30.32 Aligned_cols=27 Identities=22% Similarity=0.188 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHHHcCCC----CCCccEEEe
Q 040515 112 GKGAILAMTRALKQSGLQ----SHQVDYVNA 138 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~----~~dId~i~~ 138 (251)
......+++++|+++|++ ++|||.|..
T Consensus 12 ~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~ 42 (332)
T cd00825 12 SILGFEAAERAIADAGLSREYQKNPIVGVVV 42 (332)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCCEEEEE
Confidence 345678899999999999 999988764
No 215
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=75.22 E-value=19 Score=31.66 Aligned_cols=79 Identities=14% Similarity=0.116 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCc-CCc-HHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTP-LGD-TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~-~~D-~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
+-...+++++|+++|+.++|||.+... +.++ ..+ ..-..-+....+ . ...+|...+ +..++||+..+..
T Consensus 29 eLa~~A~~~AL~~ag~~~~dID~vi~g-~~~~~~~~g~~~a~~~~~~lG-l--~~~~p~~~V-----~~aCaSG~~Al~~ 99 (391)
T PRK07661 29 DLGALVVKETLKRAGNYEGPIDDLIIG-CAMPEAEQGLNMARNIGALAG-L--PYTVPAITI-----NRYCSSGLQSIAY 99 (391)
T ss_pred HHHHHHHHHHHHhcCCChhHCCEEEEE-eccccccccchHHHHHHHHcC-C--CCCcceeeh-----hhhhhHHHHHHHH
Confidence 455788999999999888999988774 2211 111 110110111111 1 111444444 3468999999999
Q ss_pred HHHHHhhCCc
Q 040515 191 AVLTIHHGVA 200 (251)
Q Consensus 191 ~~~~l~~~~i 200 (251)
+...++.|..
T Consensus 100 A~~~I~sG~~ 109 (391)
T PRK07661 100 GAERIMLGHS 109 (391)
T ss_pred HHHHHHcCCC
Confidence 9999988754
No 216
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=75.02 E-value=25 Score=31.13 Aligned_cols=78 Identities=21% Similarity=0.213 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcH---HHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDT---VEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAI 189 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~---~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~ 189 (251)
+-...+++++|+++||+|+|||.|.. |+.++.++. .-..+. ...+- ....|...+ +..++||+..+.
T Consensus 30 dLa~~A~~~al~~agi~p~~ID~vi~-G~~~~~~~~~~~~~r~a~-~~~Gl---~~~~pa~~V-----n~aCaSg~~Ai~ 99 (402)
T PRK08242 30 RLAAGLLEALRDRNGLDTAAVDDVVL-GCVTPVGDQGADIARTAV-LAAGL---PETVPGVQI-----NRFCASGLEAVN 99 (402)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEE-EecCCCccccccHHHHHH-HHcCC---CCCCCeEEE-----cchhhhHHHHHH
Confidence 44567899999999999999999876 344332221 111111 11111 011333333 345789999999
Q ss_pred HHHHHHhhCCc
Q 040515 190 FAVLTIHHGVA 200 (251)
Q Consensus 190 ~~~~~l~~~~i 200 (251)
.+..+++.|..
T Consensus 100 ~A~~~I~sG~~ 110 (402)
T PRK08242 100 LAAAKVRSGWD 110 (402)
T ss_pred HHHHHHHcCCC
Confidence 99999987754
No 217
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=74.19 E-value=24 Score=31.19 Aligned_cols=79 Identities=16% Similarity=0.123 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHH-cCCCCCCccEEEecCCCCcCCc--HHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHH
Q 040515 113 KGAILAMTRALKQ-SGLQSHQVDYVNAHATSTPLGD--TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAI 189 (251)
Q Consensus 113 ~~~~~a~~~al~~-Agi~~~dId~i~~h~~gt~~~D--~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~ 189 (251)
+-...+++++|++ +||+++|||.+..--. ...++ ..-...+. ..... ...+|...+ +..++||+..+.
T Consensus 28 ~L~~~a~~~al~~~agi~~~~Id~v~~G~~-~~~~~~~~~~ar~~~-~~~Gl--~~~vP~~tV-----~~aCaSG~~Ai~ 98 (401)
T PRK09050 28 DLGAVPLKALMARNPGVDWEAVDDVIYGCA-NQAGEDNRNVARMSA-LLAGL--PVSVPGTTI-----NRLCGSGMDAVG 98 (401)
T ss_pred HHHHHHHHHHHHhccCCCHHHCCEEEEEec-cccccccchHHHHHH-HHcCC--CCCCceEEE-----ecccccHHHHHH
Confidence 4567889999996 7999999998777321 11121 11111011 11111 112454444 455899999999
Q ss_pred HHHHHHhhCCc
Q 040515 190 FAVLTIHHGVA 200 (251)
Q Consensus 190 ~~~~~l~~~~i 200 (251)
.++..++.|..
T Consensus 99 ~A~~~I~sG~~ 109 (401)
T PRK09050 99 TAARAIKAGEA 109 (401)
T ss_pred HHHHHHHCCCC
Confidence 99999998764
No 218
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=73.60 E-value=25 Score=31.10 Aligned_cols=80 Identities=18% Similarity=0.060 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHH-cCCCCCCccEEEec-CCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 113 KGAILAMTRALKQ-SGLQSHQVDYVNAH-ATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 113 ~~~~~a~~~al~~-Agi~~~dId~i~~h-~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
+-...+++++|++ ++|+++|||.+..- .......-..-...+.... .. ...+|...+ +..++||+..+..
T Consensus 27 ~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~-Gl--~~~~p~~~V-----~~~CaSG~~Ai~~ 98 (400)
T TIGR02430 27 DLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLA-GL--PVSVPGTTV-----NRLCGSGLDAIGM 98 (400)
T ss_pred HHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHc-CC--CCCCceEEe-----echhhhHHHHHHH
Confidence 4567889999995 79999999987773 2211110010111011111 11 111444444 4558999999999
Q ss_pred HHHHHhhCCc
Q 040515 191 AVLTIHHGVA 200 (251)
Q Consensus 191 ~~~~l~~~~i 200 (251)
++..++.|..
T Consensus 99 a~~~I~sG~~ 108 (400)
T TIGR02430 99 AARAIKAGEA 108 (400)
T ss_pred HHHHHHCCCC
Confidence 9999998864
No 219
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=72.91 E-value=6.3 Score=34.76 Aligned_cols=48 Identities=17% Similarity=0.062 Sum_probs=31.5
Q ss_pred EEEeeeeecCCCCCCC-CCCCChHHHHHHHHHHHHHcCCCCCCccEEEe
Q 040515 91 AEVRGYGMSGDAHHIT-QPHIDGKGAILAMTRALKQSGLQSHQVDYVNA 138 (251)
Q Consensus 91 a~i~g~~~~~~~~~~~-~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~ 138 (251)
+.|.|.+...-+++.. ......+...++++++|++|||+++|||.+..
T Consensus 5 v~Ivg~~~t~~~r~~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~ 53 (403)
T PRK06289 5 VWVLGGYQSDFARNWTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHV 53 (403)
T ss_pred EEEEeCCcCccccccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 4566666544333211 11122455678999999999999999998765
No 220
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=71.84 E-value=4.7 Score=32.57 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=30.8
Q ss_pred cchhhHHHHHHHHHHHHHHHhCCcCEEEEeCcCCCc
Q 040515 6 AVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 41 (251)
Q Consensus 6 v~~~casgl~Al~~A~~~I~~G~~d~alvgg~e~~~ 41 (251)
...||.+|..+|..|....++..-..|||+.+|.++
T Consensus 158 ~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vElcs 193 (226)
T PF00195_consen 158 FGMGCAGGAAGLRRAKDIARANPGARVLVVCVELCS 193 (226)
T ss_dssp ES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEEGG
T ss_pred eccchhhHHHHHHHHHHHHhCCccceEEEEEEEeeE
Confidence 356999999999999999999999999999999744
No 221
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=71.01 E-value=42 Score=25.23 Aligned_cols=109 Identities=15% Similarity=0.121 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAV 192 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~ 192 (251)
..+...+.+.|++.+++..|+.++-+|--|...-|.+| +.++=...+ -.+-..+-..+|..-+++ ++-+.+-+
T Consensus 40 ~~i~~~~~~~L~~~g~~~~~~~~wavHPGG~~ILd~v~-----~~L~L~~~~-l~~Sr~vLr~yGNmSSaT-VlfVL~~~ 112 (151)
T PF02797_consen 40 DNIPPFVEDLLARHGLSDWDILFWAVHPGGRKILDAVE-----EALGLSPEQ-LRASREVLREYGNMSSAT-VLFVLERM 112 (151)
T ss_dssp HHHHHHHHHHHHGGTCCSGGGSEEEEE-SSHHHHHHHH-----HHHTS-GGG-GHHHHHHHHHH-B-GGGH-HHHHHHHH
T ss_pred HHHHHHHHHHHhhhcccccccceeeecCChHHHHHHHH-----HHcCCCHHH-HHHHHHHHHhcCCCCCcc-hHHHHHHH
Confidence 45677888999999999878889999966665544443 222210000 000111122567887777 33333333
Q ss_pred HH--HhhCCccCcCCCCCCCCCCCCCCCccccCCCCCCcEEEEecccccceeeeeEeeec
Q 040515 193 LT--IHHGVAPLTLNLAKPDPIFNDNFMPLTASKDMPISAALSNSFGFGGTNASLLFTKC 250 (251)
Q Consensus 193 ~~--l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~g~gG~~~~~vl~~~ 250 (251)
+. .+.+. .........++..+||.|=+.-.++|++.
T Consensus 113 ~~~~~~~g~----------------------~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 113 RRKSAEEGA----------------------PPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp HHHHHHTTT----------------------SBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred Hhhhhhhcc----------------------cCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 22 11221 00112246788889999988888888875
No 222
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=69.66 E-value=13 Score=30.13 Aligned_cols=74 Identities=18% Similarity=0.088 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE-ecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHH
Q 040515 115 AILAMTRALKQSGLQSHQVDYVN-AHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVL 193 (251)
Q Consensus 115 ~~~a~~~al~~Agi~~~dId~i~-~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~ 193 (251)
..+++++||+++|++++||+.+. +.-||. ..=..+..-++++ +-+..-..+++ ++...+.|+..|-.+..
T Consensus 104 ~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~-~~PglD~~l~~~L-gL~~~v~R~~i-------~~~GC~gg~~~L~~A~~ 174 (226)
T PF00195_consen 104 AEEAARKALAEAGLDPSDITHLVTVSCTGI-AAPGLDARLINRL-GLRPDVQRTPI-------FGMGCAGGAAGLRRAKD 174 (226)
T ss_dssp HHHHHHHHHHHHTS-GGGECEEEEEESSSS-ECS-HHHHHHHHH-T--TTSEEEEE-------ES-GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCcccceEEEEecCCc-CCCchhHHHHhcC-CCCCCcEEEEE-------eccchhhHHHHHHHHHH
Confidence 35778899999999999999866 333442 2222344444443 21111112444 34445555555544444
Q ss_pred HHhh
Q 040515 194 TIHH 197 (251)
Q Consensus 194 ~l~~ 197 (251)
-.+.
T Consensus 175 ~~~~ 178 (226)
T PF00195_consen 175 IARA 178 (226)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 4443
No 223
>PLN02854 3-ketoacyl-CoA synthase
Probab=69.14 E-value=20 Score=32.90 Aligned_cols=74 Identities=9% Similarity=0.109 Sum_probs=42.2
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHh
Q 040515 117 LAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIH 196 (251)
Q Consensus 117 ~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~ 196 (251)
.+++++|+++|++|+|||++...-++.. --+.-+.-+..-++-+.. +.-. .++-...++|+.++-.+-..|+
T Consensus 194 ~~~~~lL~kaGi~p~dID~LIv~cS~~~-p~PSlAa~I~n~LGlr~~---i~af----dLsgmGCSggl~aL~lA~~lL~ 265 (521)
T PLN02854 194 GALDSLFSKTGVKPRDIGILIVNCSLFN-PTPSLSAMIVNHYKLRTD---IKSY----NLGGMGCSAGLISIDLANDLLK 265 (521)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECCCCC-CCCCHHHHHHHHhCCCCC---ceEE----ecccchhhhHHHHHHHHHHHHH
Confidence 5677899999999999999987533321 122222323333332210 1111 2334456677777777766676
Q ss_pred hC
Q 040515 197 HG 198 (251)
Q Consensus 197 ~~ 198 (251)
.+
T Consensus 266 ~~ 267 (521)
T PLN02854 266 AN 267 (521)
T ss_pred hC
Confidence 54
No 224
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=69.09 E-value=41 Score=29.56 Aligned_cols=80 Identities=13% Similarity=-0.003 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHH-cCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhh-ccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 113 KGAILAMTRALKQ-SGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS-DHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 113 ~~~~~a~~~al~~-Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~-~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
+-...+++++|++ +|++|+|||.+.+--.. ..++. . ..+.+... ......++|...+ +..++||+..+..
T Consensus 27 ~L~~~a~~~al~~~agl~~~~Id~v~~G~~~-~~~~~-g-~~~ar~~~~~~g~~~~~p~~tV-----~~~CaSG~~Ai~~ 98 (385)
T TIGR02445 27 DLSAHLMSKLLARNPKVDPAEVEDIYWGCVQ-QTLEQ-G-FNIARNAALLAQIPHTSAAVTV-----NRLCGSSMQALHD 98 (385)
T ss_pred HHHHHHHHHHHHhccCCCHHHcCEEEEeccc-ccccc-c-chHHHHHHHHCCCCCCcchhhh-----hhhhHHHHHHHHH
Confidence 4567889999997 59999999987664221 11110 0 01111111 1111111333333 3568999999999
Q ss_pred HHHHHhhCCc
Q 040515 191 AVLTIHHGVA 200 (251)
Q Consensus 191 ~~~~l~~~~i 200 (251)
+..+++.|..
T Consensus 99 Aa~~I~sG~~ 108 (385)
T TIGR02445 99 AARAIMTGDA 108 (385)
T ss_pred HHHHHHCCCC
Confidence 9999987764
No 225
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=68.90 E-value=5.3 Score=33.66 Aligned_cols=28 Identities=36% Similarity=0.442 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecC
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHA 140 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~ 140 (251)
..+.++++.+|++++++++||||+.+-+
T Consensus 53 ~m~~~A~~~al~Ka~l~~~dId~~~aGD 80 (329)
T PF07451_consen 53 KMQKEAVELALKKAGLKKEDIDYLFAGD 80 (329)
T ss_dssp HHHHHHHHHHHHHTT--GGG-SEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCeEEEehh
Confidence 4577899999999999999999999864
No 226
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=68.80 E-value=9.4 Score=32.97 Aligned_cols=65 Identities=11% Similarity=0.120 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE-ecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhh
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVN-AHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLG 181 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~-~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~ 181 (251)
+.+...++++|+++|++++|||.|- ..|.|...+=.+-....+.+--.. .+|+..+-..-||.+.
T Consensus 51 ~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl~~~LrVG~~~Ak~LA~a~----~~PligV~HlegHi~a 116 (345)
T PTZ00340 51 EHILSLVKEALEEAKITPSDISLICYTKGPGMGAPLSVGAVVARTLSLLW----GKPLVGVNHCVAHIEM 116 (345)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHhhHHHHHHHHHHHHHHc----CCCEeecchHHHHHHH
Confidence 4566788999999999999999865 567776555555444433332221 1678778888888874
No 227
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=67.49 E-value=18 Score=32.40 Aligned_cols=83 Identities=17% Similarity=0.056 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHcCCCCCC--ccEEEecC-CCCcC---CcHHHHHHHHHHhhccCCC-CceeeecccCCccchhhhhhH
Q 040515 113 KGAILAMTRALKQSGLQSHQ--VDYVNAHA-TSTPL---GDTVEATAIRTVFSDHATS-GSLAFSSTKGAIGHLLGAAGA 185 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~d--Id~i~~h~-~gt~~---~D~~E~~a~~~~~~~~~~~-~~~~v~~~k~~~Gh~~~AsG~ 185 (251)
+-...+++++|+++||+++| ||.+...- .+... .......++..-+...... ...|...+ +..++||+
T Consensus 50 eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V-----~~~caSG~ 124 (438)
T PTZ00455 50 ELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRV-----EGACASGG 124 (438)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEE-----ECcCHHHH
Confidence 45678899999999999999 99876531 11111 1111111111101100000 11233222 34689999
Q ss_pred HHHHHHHHHHhhCCc
Q 040515 186 VEAIFAVLTIHHGVA 200 (251)
Q Consensus 186 ~~l~~~~~~l~~~~i 200 (251)
..+..++..++.|..
T Consensus 125 ~Ai~~A~~~I~sG~~ 139 (438)
T PTZ00455 125 LAVQSAWEALLAGTS 139 (438)
T ss_pred HHHHHHHHHHHCCCC
Confidence 999999999988753
No 228
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=66.15 E-value=8.5 Score=33.49 Aligned_cols=29 Identities=24% Similarity=0.430 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecC
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHA 140 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~ 140 (251)
+....+++++.++++++++++||+|=.||
T Consensus 70 g~~~a~av~~~~~~~~l~~~~id~IgsHG 98 (365)
T PRK09585 70 GRLFAEAVNALLAEAGLSPEDIDAIGSHG 98 (365)
T ss_pred HHHHHHHHHHHHHHcCCCccCccEEEeCC
Confidence 45667889999999999999999999998
No 229
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=65.64 E-value=5.5 Score=33.36 Aligned_cols=27 Identities=15% Similarity=0.262 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecC
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAHA 140 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h~ 140 (251)
.+..+++++|+++|++|+|||++.++-
T Consensus 86 v~f~av~~LL~ktgv~p~dIdiLVvnc 112 (290)
T PF08392_consen 86 VIFGAVDDLLAKTGVKPSDIDILVVNC 112 (290)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEC
Confidence 345678999999999999999987763
No 230
>PRK14878 UGMP family protein; Provisional
Probab=65.55 E-value=11 Score=32.31 Aligned_cols=32 Identities=19% Similarity=0.226 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEec-CCCCcC
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAH-ATSTPL 145 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h-~~gt~~ 145 (251)
.+...++++|+++|++++|||.|-.. |.|...
T Consensus 47 ~l~~~i~~~l~~a~~~~~did~Iavt~gPG~~~ 79 (323)
T PRK14878 47 VAPELLRKALEKAGISIEDIDAVAVSQGPGLGP 79 (323)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecCCCccc
Confidence 45678899999999999999997765 444443
No 231
>COG3360 Uncharacterized conserved protein [Function unknown]
Probab=61.62 E-value=6.4 Score=25.00 Aligned_cols=27 Identities=11% Similarity=0.163 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecC
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAHA 140 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h~ 140 (251)
++..+++.|+.+|.-+.++++++|.-.
T Consensus 18 S~d~Ai~~Ai~RA~~t~~~l~wfeV~~ 44 (71)
T COG3360 18 SIDAAIANAIARAADTLDNLDWFEVVE 44 (71)
T ss_pred cHHHHHHHHHHHHHhhhhcceEEEEEe
Confidence 577899999999999999999999874
No 232
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=61.39 E-value=58 Score=28.80 Aligned_cols=78 Identities=12% Similarity=0.092 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHH-cCCCCCCccEEEecCCC-CcC--CcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHH
Q 040515 113 KGAILAMTRALKQ-SGLQSHQVDYVNAHATS-TPL--GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEA 188 (251)
Q Consensus 113 ~~~~~a~~~al~~-Agi~~~dId~i~~h~~g-t~~--~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l 188 (251)
+-...+++++|++ +||+++|||.+..--.. ... .......++ .... ...+|..++ +..++||+..+
T Consensus 28 ~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l---~~Gl--~~~vp~~tV-----~~~CaSG~~Av 97 (400)
T PRK13359 28 DLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLL---LAGL--PHGVPGSTI-----NRLCGSGMDAV 97 (400)
T ss_pred HHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHH---HcCC--CCCCceEEE-----eccchhHHHHH
Confidence 3456789999997 59999999998774221 110 111111111 1111 111444444 34589999999
Q ss_pred HHHHHHHhhCCc
Q 040515 189 IFAVLTIHHGVA 200 (251)
Q Consensus 189 ~~~~~~l~~~~i 200 (251)
..+..+++.|..
T Consensus 98 ~~A~~~I~sG~~ 109 (400)
T PRK13359 98 GVAARAIKSGEA 109 (400)
T ss_pred HHHHHHHHcCCC
Confidence 999999998775
No 233
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=61.20 E-value=36 Score=29.89 Aligned_cols=79 Identities=13% Similarity=-0.016 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHH-cCCCCCCccEEEecCCCCcCCc--HHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHH
Q 040515 113 KGAILAMTRALKQ-SGLQSHQVDYVNAHATSTPLGD--TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAI 189 (251)
Q Consensus 113 ~~~~~a~~~al~~-Agi~~~dId~i~~h~~gt~~~D--~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~ 189 (251)
.-...+++++|++ +||+++|||.+..- +....++ ..=...+....+ . ...+|...+ +..++||+..+.
T Consensus 29 ~L~~~~~~~al~~~agl~~~~Id~vi~g-~~~~~~~~g~~~ar~~~~~~G-l--~~~~p~~~V-----~~~caSG~~Ai~ 99 (387)
T PRK08947 29 DLSAHLMRSLLARNPALDPAEIDDIIWG-CVQQTLEQGFNIARNAALLAG-I--PHSVPAVTV-----NRLCGSSMQALH 99 (387)
T ss_pred HHHHHHHHHHHHhccCcChHHhCeEEEE-eccccccccccHHHHHHHHcC-C--CCCCcceee-----echhHHHHHHHH
Confidence 3456678999996 79999999987663 1111111 100110111111 1 111333333 346899999999
Q ss_pred HHHHHHhhCCc
Q 040515 190 FAVLTIHHGVA 200 (251)
Q Consensus 190 ~~~~~l~~~~i 200 (251)
.+..+++.|..
T Consensus 100 ~A~~~I~sG~~ 110 (387)
T PRK08947 100 DAARAIMTGDG 110 (387)
T ss_pred HHHHHHHCCCC
Confidence 99999988764
No 234
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=58.91 E-value=17 Score=30.75 Aligned_cols=41 Identities=20% Similarity=0.185 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE-ecCCCCcCCcHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVN-AHATSTPLGDTVEATA 153 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~-~h~~gt~~~D~~E~~a 153 (251)
+.+...++++|+++|++++|||.|- ..|.|...+=++....
T Consensus 50 ~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tglrvg~~~ 91 (305)
T TIGR00329 50 ENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGSLRVGATF 91 (305)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhhHHHHHHH
Confidence 4556778999999999999999865 4566665554444433
No 235
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=58.61 E-value=24 Score=30.41 Aligned_cols=40 Identities=23% Similarity=0.343 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEe-cCCCCcCCcHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNA-HATSTPLGDTVEAT 152 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~-h~~gt~~~D~~E~~ 152 (251)
..+.+.++++|..||++|.|+|.|-+ -+.|-+..=.+-..
T Consensus 84 ~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~ 124 (405)
T KOG2707|consen 84 ENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLS 124 (405)
T ss_pred HHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHH
Confidence 35678899999999999999999765 45666654444333
No 236
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=57.65 E-value=15 Score=31.32 Aligned_cols=26 Identities=23% Similarity=0.266 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEec
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAH 139 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h 139 (251)
.+...++++|+++|++++|||.|-..
T Consensus 48 ~l~~~i~~~l~~~~~~~~did~Iavt 73 (322)
T TIGR03722 48 VAPKLIKEALEEAGVSLEDIDAVAFS 73 (322)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 45677999999999999999998765
No 237
>PF01890 CbiG_C: Cobalamin synthesis G C-terminus; InterPro: IPR002750 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CbiG proteins are specific for anaerobic cobalamin biosynthesis. CbiG, which shows homology with CobE of the aerobic pathway, participates in the conversion of cobalt-precorrin 5 into cobalt-precorrin 6 []. CbiG is responsible for the opening of the delta-lactone ring and extrusion of the C2-unit []. The aerobic pathway uses molecular oxygen to trigger the events at C-20 leading to contraction and expulsion of the C2-unit as acetic acid from a metal-free intermediate, whereas the anaerobic route involves the internal delivery of oxygen from a carboxylic acid terminus to C-20 followed by extrusion of the C2-unit as acetaldehyde, using cobalt complexes as substrates []. This entry represents the core domain of CibG.; GO: 0009236 cobalamin biosynthetic process; PDB: 3BY5_A 2W6K_A 2W6L_A 3EEQ_B.
Probab=57.43 E-value=22 Score=25.62 Aligned_cols=40 Identities=20% Similarity=0.263 Sum_probs=28.3
Q ss_pred EEeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 040515 92 EVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAH 139 (251)
Q Consensus 92 ~i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h 139 (251)
.+.|++...+ ...+.+..+++++|++.++++.+|+.|-.-
T Consensus 2 l~~GiGcrr~--------~~~~~i~~ai~~~l~~~~~~~~~i~~iasi 41 (121)
T PF01890_consen 2 LVLGIGCRRG--------APAEEIEEAIEQALAEAGLSPRSIAAIASI 41 (121)
T ss_dssp EEEEEEE-SS----------HHHHHHHHHHHHHHCT--GGGEEEEEES
T ss_pred EEEEeCcCCC--------CCHHHHHHHHHHHHHHcCCChhhccEEEec
Confidence 3567777653 246678999999999999999999888765
No 238
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=56.86 E-value=26 Score=29.71 Aligned_cols=71 Identities=25% Similarity=0.245 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEe---cCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHH
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNA---HATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~---h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~ 190 (251)
-..++.+++|+.+++.|+|||.|.. .|..++.-| +.-+.++ +-......+|++. +|=..||+|+.....
T Consensus 79 l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~d---ari~~~L-gl~p~~~Rvpv~g----lGCaaga~glara~~ 150 (356)
T COG3424 79 LGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLD---ARIVGEL-GLSPDTRRVPVWG----LGCAAGAAGLARARD 150 (356)
T ss_pred HHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChh---HHHHhhc-CCCCccceeeeec----chhhhhhhHHHHHHH
Confidence 3457889999999999999998654 334455433 3333333 2111123366653 344455666655444
Q ss_pred HH
Q 040515 191 AV 192 (251)
Q Consensus 191 ~~ 192 (251)
-+
T Consensus 151 y~ 152 (356)
T COG3424 151 YC 152 (356)
T ss_pred HH
Confidence 44
No 239
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=56.73 E-value=75 Score=28.66 Aligned_cols=80 Identities=11% Similarity=0.161 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCc-HHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGD-TVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 191 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D-~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~ 191 (251)
.....+.+++|++++++|++||.|+. +|-++... +.-+.-+..+++..... .+..-.++. . +++|...|..+
T Consensus 52 tma~~AA~~lL~~a~id~~~Id~Liv-~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~~---A--C~G~t~AL~~A 124 (454)
T TIGR01833 52 SLCLTVVSKLMERYNIDYNQIGRLEV-GTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTTN---A--CYGGTAALFNA 124 (454)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCCchHHHHHHHHHhcCCC-CceEEeccc---c--chhHHHHHHHH
Confidence 45577899999999999999999996 56555422 22233344544321111 122222332 2 33445555556
Q ss_pred HHHHhhCC
Q 040515 192 VLTIHHGV 199 (251)
Q Consensus 192 ~~~l~~~~ 199 (251)
...++.+.
T Consensus 125 ~~~i~s~~ 132 (454)
T TIGR01833 125 INWIESSS 132 (454)
T ss_pred HHHHHcCC
Confidence 55565543
No 240
>PRK09604 UGMP family protein; Validated
Probab=55.01 E-value=22 Score=30.50 Aligned_cols=38 Identities=18% Similarity=0.220 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEec-CCCCcCCcHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAH-ATSTPLGDTVE 150 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h-~~gt~~~D~~E 150 (251)
+.+...++++|++++++++|||.|-.- |.|...+=.+-
T Consensus 53 ~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg 91 (332)
T PRK09604 53 ENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVG 91 (332)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHH
Confidence 456677999999999999999987654 55555444433
No 241
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=54.95 E-value=96 Score=26.74 Aligned_cols=82 Identities=20% Similarity=0.089 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHcC-CCCCCccEEEecCCCC---cCCcHHHH--HHHHHHhhccCCCCceeeecccCCccchhhhhhHH
Q 040515 113 KGAILAMTRALKQSG-LQSHQVDYVNAHATST---PLGDTVEA--TAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAV 186 (251)
Q Consensus 113 ~~~~~a~~~al~~Ag-i~~~dId~i~~h~~gt---~~~D~~E~--~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~ 186 (251)
.-...+++++|++++ +++++|++|..-.+.. ...|.... ..+...++-.. . .+.. .+ -...++|+.
T Consensus 67 ~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~-~--~~~~----~i-~~~casg~~ 138 (348)
T PRK06147 67 EMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRL-E--PGSA----VI-ARGRVSGAV 138 (348)
T ss_pred HHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCC-C--CCcc----cc-cccchHHHH
Confidence 345688999999999 7999999988743311 11122111 12222222100 0 0000 01 123578889
Q ss_pred HHHHHHHHHhhCCccC
Q 040515 187 EAIFAVLTIHHGVAPL 202 (251)
Q Consensus 187 ~l~~~~~~l~~~~ip~ 202 (251)
.|..+...|+.|....
T Consensus 139 Al~~A~~~i~~G~~~~ 154 (348)
T PRK06147 139 ALAQARRLIAAGGCPR 154 (348)
T ss_pred HHHHHHHHHHcCCCCE
Confidence 9999999999877543
No 242
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=54.02 E-value=43 Score=29.82 Aligned_cols=76 Identities=18% Similarity=0.175 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCcC----CcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHH
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAHATSTPL----GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAI 189 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~----~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~ 189 (251)
-...+++.++++++++|++||.|..- +.... ....-..++..-+.. .+|-.++ .-.++||+-.+.
T Consensus 32 L~~~~~~~~l~r~~i~~~~id~vi~G-~~~~~g~~g~n~aR~~al~aglp~-----~vp~~tv-----nr~C~Sgl~ai~ 100 (417)
T PRK06025 32 LAATVLKALAERNGLNTADVDDIIWS-TSSQRGKQGGDLGRMAALDAGYDI-----KASGVTL-----DRFCGGGITSVN 100 (417)
T ss_pred HHHHHHHHHHHhcCCCHHHCCEEEEE-cCCCcCcccCcHHHHHHHhCCCCC-----CCCeeee-----ccccchHHHHHH
Confidence 44668899999999999999887663 22222 223222232221211 1333333 245789999999
Q ss_pred HHHHHHhhCCc
Q 040515 190 FAVLTIHHGVA 200 (251)
Q Consensus 190 ~~~~~l~~~~i 200 (251)
.+..+++-|..
T Consensus 101 ~aa~~I~~G~~ 111 (417)
T PRK06025 101 LAAAQIMSGME 111 (417)
T ss_pred HHHHHHHcCCC
Confidence 99999997765
No 243
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=51.64 E-value=24 Score=32.39 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEec-CCCCc
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAH-ATSTP 144 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h-~~gt~ 144 (251)
+.+...++++|+++|++++|||.|-.- |.|..
T Consensus 50 ~~l~~~i~~~l~~~~~~~~~id~iav~~gPg~~ 82 (535)
T PRK09605 50 EAIPKVIKEALEEAGLKPEDIDLVAFSQGPGLG 82 (535)
T ss_pred HHHHHHHHHHHHHcCCCHhhCCEEEECCCCCcH
Confidence 345678899999999999999997765 44543
No 244
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=50.29 E-value=11 Score=33.84 Aligned_cols=31 Identities=10% Similarity=0.209 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCc
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTP 144 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~ 144 (251)
..-..+.+++|+++|++|++||.|.. +|.|+
T Consensus 55 tmA~~AA~~aL~~agid~~~Idlliv-aTeT~ 85 (459)
T PLN02577 55 SMSLTVVKSLLEKYNIDPKQIGRLEV-GSETV 85 (459)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCC
Confidence 34567899999999999999999986 35555
No 245
>PRK07027 cobalamin biosynthesis protein CbiG; Provisional
Probab=50.10 E-value=31 Score=25.01 Aligned_cols=39 Identities=26% Similarity=0.238 Sum_probs=30.2
Q ss_pred EeeeeecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 040515 93 VRGYGMSGDAHHITQPHIDGKGAILAMTRALKQSGLQSHQVDYVNAH 139 (251)
Q Consensus 93 i~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~dId~i~~h 139 (251)
+.|.+...+ .....+..+++++|+++++.+.+|+.|-..
T Consensus 5 ~vGIGcr~~--------~~~e~i~~ai~~~L~~~~l~~~si~~lasi 43 (126)
T PRK07027 5 ALGIGCRRG--------VPAEQIEAAIRAALAQRPLASADVRVVATL 43 (126)
T ss_pred EEeeccCCC--------CCHHHHHHHHHHHHHHcCCCHHHhheeEeh
Confidence 456665542 235568899999999999999999888776
No 246
>PF04422 FrhB_FdhB_N: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; InterPro: IPR007516 Coenzyme F420 hydrogenase (1.12.99.1 from EC) reduces the low-potential two-electron acceptor coenzyme F420. This entry contains the N termini of F420 hydrogenase and dehydrogenase beta subunits [, ]. The N terminus of Methanobacterium formicicum formate dehydrogenase beta chain (1.2.1.2 from EC, P06130 from SWISSPROT) is also represented in this entry []. This region is often found in association with the 4Fe-4S binding domain, fer4 (IPR001450 from INTERPRO), and the C terminus IPR007525 from INTERPRO.
Probab=48.30 E-value=25 Score=23.33 Aligned_cols=32 Identities=19% Similarity=0.176 Sum_probs=26.9
Q ss_pred chhhHHHHHHHHHHHHHHHhCCcCEEEEeCcC
Q 040515 7 VTACATGAHSIGDAARMIQFGDSDVMVAGGTE 38 (251)
Q Consensus 7 ~~~casgl~Al~~A~~~I~~G~~d~alvgg~e 38 (251)
-..++||...-.++..+|+.|..|.+|+.+.+
T Consensus 14 r~~~~sGG~vTaLl~~lLe~g~Vd~vv~~~~~ 45 (82)
T PF04422_consen 14 REKSQSGGVVTALLAYLLESGLVDGVVVVGRD 45 (82)
T ss_pred cccCCcHHHHHHHHHHHHHcCCceEEEEEeec
Confidence 34677888888889999999999999999843
No 247
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=47.16 E-value=19 Score=31.37 Aligned_cols=29 Identities=24% Similarity=0.452 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecC
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHA 140 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~ 140 (251)
+....+++.+.++++++++++||+|=.||
T Consensus 67 g~~~a~av~~~l~~~~i~~~~I~~IgsHG 95 (364)
T PF03702_consen 67 GELFADAVNQFLKKNGISPSDIDLIGSHG 95 (364)
T ss_dssp HHHHHHHHHHHHHHCT--GGGEEEEEE--
T ss_pred HHHHHHHHHHHHHHcCCCcccccEEEeCC
Confidence 34567889999999999999999999997
No 248
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=43.69 E-value=1.2e+02 Score=26.59 Aligned_cols=23 Identities=26% Similarity=0.062 Sum_probs=19.4
Q ss_pred hhhhhhHHHHHHHHHHHhhCCcc
Q 040515 179 LLGAAGAVEAIFAVLTIHHGVAP 201 (251)
Q Consensus 179 ~~~AsG~~~l~~~~~~l~~~~ip 201 (251)
+.++||+..|..+...|+.|...
T Consensus 159 ~acaSg~~Al~~A~~~I~~G~~d 181 (407)
T TIGR03150 159 TACATGTHAIGDAFRLIQRGDAD 181 (407)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCC
Confidence 35788999999999999998754
No 249
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=40.95 E-value=1.4e+02 Score=26.20 Aligned_cols=23 Identities=30% Similarity=0.018 Sum_probs=19.3
Q ss_pred hhhhhhHHHHHHHHHHHhhCCcc
Q 040515 179 LLGAAGAVEAIFAVLTIHHGVAP 201 (251)
Q Consensus 179 ~~~AsG~~~l~~~~~~l~~~~ip 201 (251)
+..+||+..|..++.+++.|..-
T Consensus 160 ~acaSgl~Al~~A~~~I~~G~~d 182 (411)
T PRK07314 160 TACATGAHAIGDAARLIAYGDAD 182 (411)
T ss_pred hhhHHHHHHHHHHHHHHhcCCCC
Confidence 34788899999999999998753
No 250
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=40.69 E-value=20 Score=29.74 Aligned_cols=42 Identities=14% Similarity=0.187 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE-ecCCCCcCCcHHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVN-AHATSTPLGDTVEATAI 154 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~-~h~~gt~~~D~~E~~a~ 154 (251)
+.+...++++|++++++++|||.|- .-|.|...+=++-....
T Consensus 31 ~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~A 73 (268)
T PF00814_consen 31 ENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFA 73 (268)
T ss_dssp HHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHH
Confidence 4566788999999999999999865 45667665445444333
No 251
>KOG3605 consensus Beta amyloid precursor-binding protein [General function prediction only]
Probab=40.36 E-value=30 Score=32.36 Aligned_cols=46 Identities=24% Similarity=0.393 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHHHHcCCCC----CCccEEEecCCCCcCCcHHHHHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQS----HQVDYVNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~----~dId~i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
++++..+..+.|+..||++ .++||=|.-.+-...+|..|.++=...
T Consensus 596 GQAFqVAY~EFLrANGI~~e~l~~q~dYqevlNsQei~gDeLe~FakkE~ 645 (829)
T KOG3605|consen 596 GQAFQVAYMEFLRANGIEPEDLVSQMDYQEVLNSQEIFGDELEHFAKKEN 645 (829)
T ss_pred HHHHHHHHHHHHHHcCCCchHhhhhcchhhccchhhhhccHHHHhhhhcc
Confidence 5667788889999999999 677999999999999999999986554
No 252
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=40.11 E-value=52 Score=28.00 Aligned_cols=63 Identities=14% Similarity=0.124 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE-ecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccch
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVN-AHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHL 179 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~-~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~ 179 (251)
+.+...++++|++++++++|||.|- .-|.|.-.+=++-....+.+--.. .+|+..+....+|.
T Consensus 51 ~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~----~~p~~~v~h~~aha 114 (314)
T TIGR03723 51 EAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALAL----NKPLIGVNHLEGHL 114 (314)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHh----CCCEEecccHHHHH
Confidence 4566788999999999999998865 456676655555444433332111 14555555444443
No 253
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=39.52 E-value=69 Score=28.80 Aligned_cols=94 Identities=19% Similarity=0.125 Sum_probs=58.7
Q ss_pred HHHHHHHHcCCCC-CCccEEEecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHHHHHh
Q 040515 118 AMTRALKQSGLQS-HQVDYVNAHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAVLTIH 196 (251)
Q Consensus 118 a~~~al~~Agi~~-~dId~i~~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~~~l~ 196 (251)
+++-|-+-+.+.| .+++.|.--.+|+...|..=-.+++-......++...-++--.++-|.++++.++-++...-..+-
T Consensus 89 a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~ 168 (449)
T COG0161 89 AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFY 168 (449)
T ss_pred HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhc
Confidence 3444555566777 569998888888754443322333222222222333467777789999999998888766665666
Q ss_pred hCCccCcCCCCCCCC
Q 040515 197 HGVAPLTLNLAKPDP 211 (251)
Q Consensus 197 ~~~ip~~~~~~~~~~ 211 (251)
...+|.+.+...|.+
T Consensus 169 ~~ll~~~~~~~~P~~ 183 (449)
T COG0161 169 DPLLPEVLHLPAPYA 183 (449)
T ss_pred cccccCceecCCCcc
Confidence 666676666666553
No 254
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=39.24 E-value=91 Score=27.44 Aligned_cols=22 Identities=14% Similarity=0.157 Sum_probs=18.4
Q ss_pred hhhhhHHHHHHHHHHHhhCCcc
Q 040515 180 LGAAGAVEAIFAVLTIHHGVAP 201 (251)
Q Consensus 180 ~~AsG~~~l~~~~~~l~~~~ip 201 (251)
..+||+..|..+..+++.|..-
T Consensus 169 acasg~~Al~~A~~~I~~G~~d 190 (424)
T smart00825 169 ACSSSLVALHLACQSLRSGECD 190 (424)
T ss_pred HhHHHHHHHHHHHHHHHcCCCC
Confidence 5788899999999999988754
No 255
>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=38.67 E-value=36 Score=28.73 Aligned_cols=28 Identities=21% Similarity=0.297 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEec
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAH 139 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h 139 (251)
...+.+++++++.++|++|++|+...+-
T Consensus 48 ~~ni~~ai~~A~~~aG~~~~~i~~~~ag 75 (301)
T COG2971 48 VRNIKDAIREALDEAGLKPDEIAAIVAG 75 (301)
T ss_pred HHHHHHHHHHHHHhcCCCHHHhCceeee
Confidence 4678899999999999999999876653
No 256
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=38.27 E-value=1.5e+02 Score=25.82 Aligned_cols=75 Identities=12% Similarity=0.022 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcC-CcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPL-GDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFA 191 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~-~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~ 191 (251)
.....+++++|+++ +++|||.+.. +|-++. ..+.-+..+...++-.. .++..-++ .-+++|+..+..+
T Consensus 51 ~la~~Aa~~aL~~a--~~~~Id~li~-~t~s~~~~~~s~a~~v~~~Lgl~~---~~~~~dv~-----~aC~gg~~aL~~A 119 (379)
T TIGR01835 51 TMAASAAKPILDRN--DKQKIDMVIF-GTESGIDQSKAAAVYVHGLLGLQP---FCRSFELK-----QACYGATAALQMA 119 (379)
T ss_pred HHHHHHHHHHHHhC--CHhhCCEEEE-EeCCCCCCCCCHHHHHHHHhCCCC---CceEEEec-----cccHHHHHHHHHH
Confidence 45567899999998 8999999884 444433 22334444555554221 12222222 2345556666666
Q ss_pred HHHHhhC
Q 040515 192 VLTIHHG 198 (251)
Q Consensus 192 ~~~l~~~ 198 (251)
...++.+
T Consensus 120 ~~~i~s~ 126 (379)
T TIGR01835 120 KGHVALS 126 (379)
T ss_pred HHHHHcC
Confidence 5555543
No 257
>PF07311 Dodecin: Dodecin; InterPro: IPR009923 This entry represents proteins with a Dodecin-like topology. Dodecin flavoprotein is a small dodecameric flavin-binding protein from Halobacterium salinarium (Halobacterium halobium) that contains two flavins stacked in a single binding pocket between two tryptophan residues to form an aromatic tetrade []. Dodecin binds riboflavin, although it appears to have a broad specificity for flavins. Lumichrome, a molecule associated with flavin metabolism, appears to be a ligand of dodecin, which could act as a waste-trapping device. ; PDB: 2VYX_L 2DEG_F 2V18_K 2V19_D 2UX9_B 2CZ8_E 2V21_F 2CC8_A 2CCB_A 2VX9_A ....
Probab=37.08 E-value=20 Score=22.79 Aligned_cols=26 Identities=8% Similarity=0.091 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEec
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAH 139 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h 139 (251)
++..|++.|+++|.-+..+|..+|.-
T Consensus 15 S~edAv~~Av~~A~kTl~ni~~~eV~ 40 (66)
T PF07311_consen 15 SWEDAVQNAVARASKTLRNIRWFEVK 40 (66)
T ss_dssp HHHHHHHHHHHHHHHHSSSEEEEEEE
T ss_pred CHHHHHHHHHHHHhhchhCcEEEEEE
Confidence 68899999999999999999998875
No 258
>PF14804 Jag_N: Jag N-terminus; PDB: 3GKU_B.
Probab=36.23 E-value=31 Score=20.79 Aligned_cols=26 Identities=23% Similarity=0.362 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEec
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAH 139 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h 139 (251)
.+..|++.|+++-+++.++++|=.+.
T Consensus 6 t~eeAi~~A~~~l~~~~~~~~~eVi~ 31 (52)
T PF14804_consen 6 TVEEAIEKALKELGVPREELEYEVIE 31 (52)
T ss_dssp SHHHHHHHHHHHTT--GGGEEEEEEE
T ss_pred CHHHHHHHHHHHhCCChHHEEEEEEE
Confidence 46789999999999999999875554
No 259
>PRK05788 cobalamin biosynthesis protein CbiG; Validated
Probab=36.12 E-value=57 Score=27.84 Aligned_cols=29 Identities=17% Similarity=0.223 Sum_probs=25.2
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 040515 111 DGKGAILAMTRALKQSGLQSHQVDYVNAH 139 (251)
Q Consensus 111 ~~~~~~~a~~~al~~Agi~~~dId~i~~h 139 (251)
..+.+..+++++|+++|+++++|+.+-..
T Consensus 206 ~~e~i~~ai~~~L~~~~i~~~~i~~iati 234 (315)
T PRK05788 206 SAEEIAEAVERALEALNIDPRAVKAIASI 234 (315)
T ss_pred CHHHHHHHHHHHHHHcCCCHHHccEEeee
Confidence 45678999999999999999999888665
No 260
>PF03990 DUF348: Domain of unknown function (DUF348) ; InterPro: IPR007137 This domain normally occurs as tandem repeats; however it is found as a single copy in the Saccharomyces cerevisiae (Baker's yeast) DNA-binding nuclear protein YCR593 (P25357 from SWISSPROT).
Probab=34.85 E-value=53 Score=18.65 Aligned_cols=22 Identities=27% Similarity=0.345 Sum_probs=18.7
Q ss_pred HHHHHHHHcCCCCCCccEEEec
Q 040515 118 AMTRALKQSGLQSHQVDYVNAH 139 (251)
Q Consensus 118 a~~~al~~Agi~~~dId~i~~h 139 (251)
.+.++|++.||...+-|.|+..
T Consensus 19 tV~~~L~~~gI~l~~~D~v~p~ 40 (43)
T PF03990_consen 19 TVGDALKELGITLGEEDKVSPS 40 (43)
T ss_pred CHHHHHHhCCCCCCCCCEEecC
Confidence 4778999999999888888764
No 261
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=33.37 E-value=90 Score=24.53 Aligned_cols=46 Identities=11% Similarity=0.146 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccE-EEecCCCCcCCcHHHHHHHHHH
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDY-VNAHATSTPLGDTVEATAIRTV 157 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~-i~~h~~gt~~~D~~E~~a~~~~ 157 (251)
.+.+...++++|++++++++|||. ...-|.|.-.+=++-....+.+
T Consensus 34 ~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTGlRig~~~akgl 80 (202)
T TIGR03725 34 SEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTGLRIGLATAKGL 80 (202)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHH
Confidence 345677889999999999999986 5567788777766665555444
No 262
>cd01817 RGS12_RBD Ubiquitin domain of RGS12 and RGS14. RGS12 (regulator of G signalling 12), and RGS14, are members of a family of GTPase-activating proteins (GAP's) specific for the G-alpha subunit, which act as key inhibitors of G-protein-mediated cell responses in eukaryotes. Their domain architecture includes tandem RBD domains as well as PDZ , PTB, and RGS, and GoLoco domains.
Probab=33.29 E-value=24 Score=22.92 Aligned_cols=27 Identities=15% Similarity=0.192 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEe
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNA 138 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~ 138 (251)
+..+.+++.+++++-|+.++.++++-.
T Consensus 19 G~ti~d~L~kllekRgl~~~~~~vf~~ 45 (73)
T cd01817 19 GESIRDLLSGLCEKRGINYAAVDLFLV 45 (73)
T ss_pred CCCHHHHHHHHHHHcCCChhHEEEEEe
Confidence 556788999999999999999999888
No 263
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=32.76 E-value=55 Score=28.46 Aligned_cols=27 Identities=22% Similarity=0.354 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEec
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAH 139 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h 139 (251)
+..+..+.+++++|+++.+|+|||.=.
T Consensus 67 elV~dtl~e~~k~A~l~i~DL~FVVRS 93 (445)
T TIGR03285 67 ELVKDTLKESLKKAGLDIDDLDFVVRS 93 (445)
T ss_pred HHHHHHHHHHHHHcCCChhhccEEEec
Confidence 455677788999999999999998643
No 264
>PRK13410 molecular chaperone DnaK; Provisional
Probab=32.22 E-value=53 Score=31.25 Aligned_cols=44 Identities=27% Similarity=0.382 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhh
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS 159 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~ 159 (251)
.....++++|+++|++++||+.|++-|-++.. +.=...+...|+
T Consensus 310 r~~~~i~~~L~~ag~~~~dId~VvLVGGssRi--P~V~~~l~~~fg 353 (668)
T PRK13410 310 RLLRPVKRALKDAGLSPEDIDEVVLVGGSTRM--PMVQQLVRTLIP 353 (668)
T ss_pred HHHHHHHHHHHHcCCChhhCcEEEEECCcccc--HHHHHHHHHHcC
Confidence 44566889999999999999999999887765 222334555565
No 265
>TIGR00114 lumazine-synth 6,7-dimethyl-8-ribityllumazine synthase. Archaeal members of this family are considered putative, although included in the seed and scoring above the trusted cutoff.
Probab=30.57 E-value=2.2e+02 Score=21.00 Aligned_cols=79 Identities=15% Similarity=0.149 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHH-HHHhhccCCCCceeeecc-cCCccchhhhhhHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAI-RTVFSDHATSGSLAFSST-KGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~-~~~~~~~~~~~~~~v~~~-k~~~Gh~~~AsG~~~l~~ 190 (251)
..+.....+.|++.|+..++|+.++.=|.. |.-.. +++......+.-+.++.+ |+-+-|-.--+-...-..
T Consensus 16 ~~L~~ga~~~l~~~g~~~~~i~v~~VPGa~-------EiP~a~~~l~~~~~~DavI~LG~VIrG~T~H~e~v~~~v~~gl 88 (138)
T TIGR00114 16 DMLLKGAIDALKRLGAEVDNIDVIWVPGAF-------ELPLAVKKLAETGKYDAVIALGCVIRGGTPHFEYVADEAAKGI 88 (138)
T ss_pred HHHHHHHHHHHHHcCCCccceEEEECCcHH-------HHHHHHHHHHhcCCCCEEEEEeeEEeCCCchhHHHHHHHHHHH
Confidence 456777888999999999999999887655 65443 344333334444566654 556667554443333333
Q ss_pred HHHHHhhC
Q 040515 191 AVLTIHHG 198 (251)
Q Consensus 191 ~~~~l~~~ 198 (251)
.-++|+.+
T Consensus 89 ~~~sl~~~ 96 (138)
T TIGR00114 89 ADLALDYD 96 (138)
T ss_pred HHHHhhhC
Confidence 33445543
No 266
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=29.63 E-value=3.3e+02 Score=24.01 Aligned_cols=24 Identities=42% Similarity=0.206 Sum_probs=20.2
Q ss_pred hhhhhhHHHHHHHHHHHhhCCccC
Q 040515 179 LLGAAGAVEAIFAVLTIHHGVAPL 202 (251)
Q Consensus 179 ~~~AsG~~~l~~~~~~l~~~~ip~ 202 (251)
+..+||+..+..+...|+.|...-
T Consensus 160 ~acas~~~Al~~A~~~i~~G~~d~ 183 (406)
T PRK08439 160 TACAAGTHAIIEAVKTIMLGGADK 183 (406)
T ss_pred cHhHHHHHHHHHHHHHHHcCCCCE
Confidence 347899999999999999988654
No 267
>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=28.83 E-value=54 Score=30.95 Aligned_cols=42 Identities=14% Similarity=0.245 Sum_probs=30.8
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhc
Q 040515 117 LAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSD 160 (251)
Q Consensus 117 ~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~ 160 (251)
.-+.++|++++++.+||+.||.-|.+++. ++=-+-|..+|+.
T Consensus 318 ~p~~~~l~d~~l~~edi~~VEiVGg~sri--paike~Is~~Fgk 359 (727)
T KOG0103|consen 318 VPLLKALADAKLKVEDIHAVEIVGGLSRI--PAIKEMISDFFGK 359 (727)
T ss_pred HHHHHHHHHhcCccccceeEEEecCcccc--hHHHHHHHHHhCC
Confidence 34678899999999999999999988876 2222334455553
No 268
>cd06155 eu_AANH_C_1 A group of hypothetical eukaryotic proteins, characterized by the presence of an adenine nucleotide alpha hydrolase (AANH)-like domain located N-terminal to two distinctly different YjgF-YER057c-UK114-like domains. This CD contains the first of these domains. The YjgF-YER057c-UK114 protein family is a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.
Probab=27.33 E-value=1.1e+02 Score=20.98 Aligned_cols=38 Identities=18% Similarity=0.342 Sum_probs=26.6
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhh
Q 040515 117 LAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS 159 (251)
Q Consensus 117 ~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~ 159 (251)
+-+++.|+.+|.+++||-.+..+= .|......+.+++.
T Consensus 33 ~ni~~~L~~aG~~~~dVv~~~iyl-----~d~~~~~~~n~~~~ 70 (101)
T cd06155 33 SKLREILQSNGLSLSDILYVTLYL-----RDMSDFAEVNSVYG 70 (101)
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEE-----CCHHHHHHHHHHHH
Confidence 456789999999999987766662 34445555665554
No 269
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X.
Probab=26.89 E-value=66 Score=28.62 Aligned_cols=40 Identities=18% Similarity=0.158 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHH
Q 040515 115 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAI 154 (251)
Q Consensus 115 ~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~ 154 (251)
+...++-.|+++|++++||+-|.+-|..-..-|...+..+
T Consensus 310 i~aGi~~Ll~~agi~~~di~~v~lAG~FG~~l~~~~a~~i 349 (412)
T PF14574_consen 310 IRAGIEILLEEAGISPEDIDRVYLAGGFGNYLDPESAIRI 349 (412)
T ss_dssp HHHHHHHHHHHTT--GGG--EEEEECSS-SEEEHHHHHHT
T ss_pred HHHHHHHHHHHcCCCHHHccEEEEeCcccccCCHHHHhhc
Confidence 3455677899999999999999999887777677555554
No 270
>PRK11530 hypothetical protein; Provisional
Probab=26.45 E-value=17 Score=27.89 Aligned_cols=18 Identities=33% Similarity=0.663 Sum_probs=16.0
Q ss_pred HHHcCCCCCCccEEEecC
Q 040515 123 LKQSGLQSHQVDYVNAHA 140 (251)
Q Consensus 123 l~~Agi~~~dId~i~~h~ 140 (251)
|.-.|++|++++||-+|+
T Consensus 156 LrLsGitPeQLGfVRvH~ 173 (183)
T PRK11530 156 LRLSGITPEQLGFVRIHD 173 (183)
T ss_pred EEeCCCCHHHcceEEEee
Confidence 556799999999999996
No 271
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=25.51 E-value=2.4e+02 Score=24.99 Aligned_cols=23 Identities=30% Similarity=0.046 Sum_probs=19.9
Q ss_pred hhhhhHHHHHHHHHHHhhCCccC
Q 040515 180 LGAAGAVEAIFAVLTIHHGVAPL 202 (251)
Q Consensus 180 ~~AsG~~~l~~~~~~l~~~~ip~ 202 (251)
..+||+..+..+..+|+.|...-
T Consensus 167 aCaSg~~Al~~A~~~I~~G~~d~ 189 (421)
T PTZ00050 167 ACATGAHCIGEAFRWIKYGEADI 189 (421)
T ss_pred HhHHHHHHHHHHHHHHHcCCCCE
Confidence 58899999999999999988643
No 272
>PRK13411 molecular chaperone DnaK; Provisional
Probab=25.45 E-value=72 Score=30.26 Aligned_cols=45 Identities=31% Similarity=0.422 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhc
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSD 160 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~ 160 (251)
.....++++|++++++++||+.|++-|-++.. +.=...++..|+.
T Consensus 309 ~~~~~i~~~L~~a~~~~~~id~ViLvGGssri--P~v~~~l~~~f~~ 353 (653)
T PRK13411 309 ATIEPMQQALKDAGLKPEDIDRVILVGGSTRI--PAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHHcCCCHHHCcEEEEECCCCCc--chHHHHHHHHcCC
Confidence 34567889999999999999999999877765 2223445566653
No 273
>PRK00061 ribH 6,7-dimethyl-8-ribityllumazine synthase; Provisional
Probab=24.98 E-value=3.1e+02 Score=20.72 Aligned_cols=79 Identities=18% Similarity=0.247 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHH-HHHHhhccCCCCceeeecc-cCCccchhhhhhHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATA-IRTVFSDHATSGSLAFSST-KGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a-~~~~~~~~~~~~~~~v~~~-k~~~Gh~~~AsG~~~l~~ 190 (251)
..+.....+.|++.|++.++|+.++.=|.. |.-. ++++......+.-+.++.+ ++-+-|-.--+....-..
T Consensus 28 ~~l~~ga~~~l~~~gv~~~~i~v~~VPGa~-------EiP~a~~~l~~~~~~DavIalG~VIrG~T~H~e~V~~~v~~gl 100 (154)
T PRK00061 28 DALLEGALDALKRHGVSEENIDVVRVPGAF-------EIPLAAKKLAESGKYDAVIALGAVIRGETPHFDYVANEVAKGL 100 (154)
T ss_pred HHHHHHHHHHHHHcCCCccceEEEECCCHH-------HHHHHHHHHHHcCCCCEEEEEeeEEcCCCchHHHHHHHHHHHH
Confidence 356677788899999999999999987654 6543 3444433333445666665 666667555443333222
Q ss_pred HHHHHhhC
Q 040515 191 AVLTIHHG 198 (251)
Q Consensus 191 ~~~~l~~~ 198 (251)
.-.+|+.+
T Consensus 101 ~~v~l~~~ 108 (154)
T PRK00061 101 ADVSLETG 108 (154)
T ss_pred HHHHhccC
Confidence 33344443
No 274
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=24.80 E-value=3.7e+02 Score=23.34 Aligned_cols=23 Identities=30% Similarity=0.063 Sum_probs=18.9
Q ss_pred hhhhhhHHHHHHHHHHHhhCCcc
Q 040515 179 LLGAAGAVEAIFAVLTIHHGVAP 201 (251)
Q Consensus 179 ~~~AsG~~~l~~~~~~l~~~~ip 201 (251)
..++|++..|..+..+|+.|..-
T Consensus 159 ~acas~~~Al~~A~~~i~~G~~d 181 (406)
T cd00834 159 TACASGAHAIGDAARLIRLGRAD 181 (406)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCC
Confidence 35677899999999999988754
No 275
>PF00885 DMRL_synthase: 6,7-dimethyl-8-ribityllumazine synthase; InterPro: IPR002180 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase) catalyses the biosynthesis of riboflavin according to the reaction: 2 6,7-dimethyl-8-(1-D-ribityl)lumazine = riboflavin + 4-(1-D-ribitylamino)-5-amino-2,6-dihydroxypyrimidine. The biosynthesis of one riboflavin molecule requires one molecule of GTP and two molecules of ribulose 5-phosphate as substrates. The final step in the biosynthesis of the vitamin involves the dismutation of 6,7-dimethyl-8-ribityllumazine catalyzed by riboflavin synthase. The second product, 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione, is recycled in the biosynthetic pathway by 6,7-dimethyl-8-ribityllumazine synthase []. N-[2,4-dioxo-6-d-ribitylamino-1,2,3,4-tetrahydropyrimidin-5-yl]oxalamic acid derivatives inhibit riboflavin synthase []. This family includes the beta chain of 6,7-dimethyl-8-ribityllumazine synthase 2.5.1.9 from EC. The family also includes a subfamily of distant archaebacterial proteins that may also have the same function for example O28856 from SWISSPROT.; GO: 0009231 riboflavin biosynthetic process, 0009349 riboflavin synthase complex; PDB: 2O6H_D 1C41_C 2OBX_H 1VSX_H 1VSW_3 3JV8_C 3MK3_r 3NQ4_G 2A58_A 2A57_D ....
Probab=24.67 E-value=3e+02 Score=20.46 Aligned_cols=79 Identities=16% Similarity=0.232 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHH-HHHHHHhhccCCCCceeeec-ccCCccchhhhhhHHHHHH
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEA-TAIRTVFSDHATSGSLAFSS-TKGAIGHLLGAAGAVEAIF 190 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~-~a~~~~~~~~~~~~~~~v~~-~k~~~Gh~~~AsG~~~l~~ 190 (251)
..+.+...+.|++.|++.++|+.+..-|.. |. .+++++......+.-+.++. .|+-+=|-.=.+-...-..
T Consensus 19 ~~ll~~a~~~l~~~g~~~~~i~~~~VPGa~-------ElP~a~~~l~~~~~~Davi~lG~VI~G~T~H~~~v~~~v~~gl 91 (144)
T PF00885_consen 19 DRLLEGALEELKRHGVAEENIEVIRVPGAF-------ELPLAAKRLAESGRYDAVIALGCVIRGETDHFEYVANAVSRGL 91 (144)
T ss_dssp HHHHHHHHHHHHHTTTTGGCEEEEEESSGG-------GHHHHHHHHHHCSTESEEEEEEEEE--SSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCccceEEEEcCCHH-------HHHHHHHHHhcccCccEEEEeccccCCCchHHHHHHHHHHHHH
Confidence 355666788899999999999999998766 54 44555554433344456665 5676667665554433333
Q ss_pred HHHHHhhC
Q 040515 191 AVLTIHHG 198 (251)
Q Consensus 191 ~~~~l~~~ 198 (251)
.-++|+++
T Consensus 92 ~~lsl~~~ 99 (144)
T PF00885_consen 92 MDLSLEYG 99 (144)
T ss_dssp HHHHHHHT
T ss_pred HHHhccCC
Confidence 34455554
No 276
>cd01760 RBD Ubiquitin-like domain of RBD-like S/T kinases. The ras-binding domain (RBD) of the serine/threonine kinase raf is structurally quite similar to the beta-grasp fold of ubiquitin. A raf-like RBD is also present in RGS12 and other members of a family of GTPase activating proteins and TIAM1, a guanine nucleotide exchange protein.
Probab=23.75 E-value=81 Score=20.40 Aligned_cols=31 Identities=19% Similarity=0.192 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 040515 112 GKGAILAMTRALKQSGLQSHQVDYVNAHATS 142 (251)
Q Consensus 112 ~~~~~~a~~~al~~Agi~~~dId~i~~h~~g 142 (251)
+..+.+++.+++++-|+.|++.++.-.++..
T Consensus 19 g~ti~d~L~~~c~kr~l~~~~~~v~~~~~~~ 49 (72)
T cd01760 19 GMSVRDVLAKACKKRGLNPECCDVFLLGLDE 49 (72)
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEEEecCCC
Confidence 4457889999999999999999988887543
No 277
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=23.41 E-value=1.1e+02 Score=29.21 Aligned_cols=44 Identities=14% Similarity=0.280 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhc
Q 040515 115 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSD 160 (251)
Q Consensus 115 ~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~ 160 (251)
....+.++|++++++++|||-|.+-|-++.. +.=...+...|+.
T Consensus 336 ~~~~v~~~L~~a~~~~~dId~VvLVGGssri--P~V~~~l~~~fg~ 379 (657)
T PTZ00186 336 SIAPCKQCMKDAGVELKEINDVVLVGGMTRM--PKVVEEVKKFFQK 379 (657)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEECCcccC--hHHHHHHHHHhCC
Confidence 3456788999999999999999999877765 2233455566653
No 278
>PLN02404 6,7-dimethyl-8-ribityllumazine synthase
Probab=23.30 E-value=2.7e+02 Score=20.72 Aligned_cols=64 Identities=14% Similarity=0.183 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHH-HHHHHhhccCCCCceeeecc-cCCccchhhhh
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEAT-AIRTVFSDHATSGSLAFSST-KGAIGHLLGAA 183 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~-a~~~~~~~~~~~~~~~v~~~-k~~~Gh~~~As 183 (251)
..+.....+.|++.|++.++|+.++.=|.. |.- +++++......+.-+.++.+ |+-+-|-.--+
T Consensus 23 ~~Ll~ga~~~l~~~gv~~~~i~v~~VPGa~-------EiP~a~~~l~~s~~~DavIaLG~VIrGeT~H~e~V~ 88 (141)
T PLN02404 23 KNLLEGALETFKRYSVKEENIDVVWVPGSF-------EIPVVAQRLAKSGKYDAILCIGAVIRGDTTHYDAVA 88 (141)
T ss_pred HHHHHHHHHHHHHcCCCccceEEEEcCcHH-------HHHHHHHHHHhcCCCCEEEEEEEEEeCCCchhHHHH
Confidence 456777888999999999999999987654 653 33444333333434555543 45566655443
No 279
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=22.54 E-value=98 Score=28.90 Aligned_cols=44 Identities=23% Similarity=0.310 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhh
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS 159 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~ 159 (251)
.....++++|++++++++|||.|++-|-++.. +.=...+...|+
T Consensus 306 ~~~~~i~~~l~~a~~~~~~i~~V~LvGGssri--P~v~~~i~~~f~ 349 (595)
T TIGR02350 306 RTKEPVRQALKDAGLSASDIDEVILVGGSTRI--PAVQELVKDFFG 349 (595)
T ss_pred HHHHHHHHHHHHcCCCHhHCcEEEEECCcccC--hHHHHHHHHHhC
Confidence 44566789999999999999999999877765 222344555565
No 280
>PLN03184 chloroplast Hsp70; Provisional
Probab=22.46 E-value=95 Score=29.59 Aligned_cols=44 Identities=16% Similarity=0.171 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhh
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS 159 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~ 159 (251)
.....++++|++++++++|||.|++-|-++.. +.=...+...|+
T Consensus 347 r~~~~i~~~L~~a~~~~~dId~ViLvGGssri--P~V~~~i~~~fg 390 (673)
T PLN03184 347 RCKTPVENALRDAKLSFKDIDEVILVGGSTRI--PAVQELVKKLTG 390 (673)
T ss_pred HHHHHHHHHHHHcCCChhHccEEEEECCcccc--HHHHHHHHHHhC
Confidence 34456788999999999999999999877765 223344556664
No 281
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=22.38 E-value=4.5e+02 Score=22.89 Aligned_cols=23 Identities=13% Similarity=0.131 Sum_probs=18.9
Q ss_pred hhhhhhHHHHHHHHHHHhhCCcc
Q 040515 179 LLGAAGAVEAIFAVLTIHHGVAP 201 (251)
Q Consensus 179 ~~~AsG~~~l~~~~~~l~~~~ip 201 (251)
...+||+..|..+...++.|...
T Consensus 168 ~acas~~~Al~~A~~~I~~G~~d 190 (421)
T cd00833 168 TACSSSLVALHLACQSLRSGECD 190 (421)
T ss_pred cHhHHHHHHHHHHHHHHHcCCCC
Confidence 35788899999999999988754
No 282
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=22.32 E-value=1.2e+02 Score=28.54 Aligned_cols=45 Identities=27% Similarity=0.389 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhc
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSD 160 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~ 160 (251)
.....++++|++++++++||+.|++-|-++.. +.=...+...|+.
T Consensus 310 ~~~~~i~~~L~~a~~~~~~i~~ViLvGGssri--P~v~~~l~~~fg~ 354 (616)
T PRK05183 310 RTLLACRRALRDAGVEADEVKEVVMVGGSTRV--PLVREAVGEFFGR 354 (616)
T ss_pred HHHHHHHHHHHHcCCCcccCCEEEEECCcccC--hHHHHHHHHHhcc
Confidence 44566789999999999999999999877765 2223345555653
No 283
>PF09861 DUF2088: Domain of unknown function (DUF2088); InterPro: IPR018657 This domain, found in various hypothetical proteins, has no known function. ; PDB: 2YJG_B.
Probab=21.98 E-value=2.3e+02 Score=22.50 Aligned_cols=33 Identities=18% Similarity=0.365 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCcC
Q 040515 113 KGAILAMTRALKQSGLQSHQVDYVNAHATSTPL 145 (251)
Q Consensus 113 ~~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~ 145 (251)
..+...+-+-|+.+|+..++|.+|.+.|+--+.
T Consensus 71 ~~il~~ll~~L~~~Gv~~~~i~ii~A~G~Hr~~ 103 (204)
T PF09861_consen 71 DLILPALLEELEEAGVKDEDITIIIALGTHRPM 103 (204)
T ss_dssp HHHHHHHHHHHHT-T-TT-EEEEEEE-TTS---
T ss_pred HHHHHHHHHHHHhcCCCccCEEEEEeCCCCCCC
Confidence 456678888899999999999999988776555
No 284
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=21.96 E-value=1.2e+02 Score=26.64 Aligned_cols=46 Identities=22% Similarity=0.216 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhh
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS 159 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~ 159 (251)
.-..+.+++|++++++|++|+.|+.--...+.....-+.-+..+++
T Consensus 54 maveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg 99 (377)
T COG3425 54 MAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALG 99 (377)
T ss_pred HHHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhC
Confidence 4567889999999999999999988644444433333334444444
No 285
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=21.93 E-value=1.1e+02 Score=28.75 Aligned_cols=44 Identities=25% Similarity=0.323 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhh
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS 159 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~ 159 (251)
.....++++|++++++++||+.|++-|-++.. +.=...++..|+
T Consensus 308 ~~~~~i~~~l~~a~~~~~~id~ViLvGGssri--P~v~~~l~~~fg 351 (627)
T PRK00290 308 RTIEPCKQALKDAGLSVSDIDEVILVGGSTRM--PAVQELVKEFFG 351 (627)
T ss_pred HHHHHHHHHHHHcCCChhhCcEEEEECCcCCC--hHHHHHHHHHhC
Confidence 44566789999999999999999999877765 222344555664
No 286
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=21.73 E-value=1.2e+02 Score=28.42 Aligned_cols=45 Identities=22% Similarity=0.325 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhc
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSD 160 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~ 160 (251)
.....++++|++++++++|||.|++-|-++.. +.=...+...|+.
T Consensus 294 ~i~~~i~~~L~~a~~~~~~id~ViLvGGssri--P~V~~~l~~~f~~ 338 (599)
T TIGR01991 294 KTLSICRRALRDAGLSVEEIKGVVLVGGSTRM--PLVRRAVAELFGQ 338 (599)
T ss_pred HHHHHHHHHHHHcCCChhhCCEEEEECCcCCC--hHHHHHHHHHhCC
Confidence 44566789999999999999999998877765 2223445556653
No 287
>CHL00094 dnaK heat shock protein 70
Probab=21.38 E-value=1.1e+02 Score=28.73 Aligned_cols=43 Identities=19% Similarity=0.268 Sum_probs=31.3
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhc
Q 040515 116 ILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSD 160 (251)
Q Consensus 116 ~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~ 160 (251)
...++++|++++++++||+.|++-|-++.. +.=...+...|+.
T Consensus 312 ~~~i~~~L~~a~~~~~~i~~ViLvGGssri--P~v~~~l~~~fg~ 354 (621)
T CHL00094 312 RIPVENALKDAKLDKSDIDEVVLVGGSTRI--PAIQELVKKLLGK 354 (621)
T ss_pred HHHHHHHHHHcCCChhhCcEEEEECCccCC--hHHHHHHHHHhCC
Confidence 345678999999999999999999877765 2223345556653
No 288
>KOG0104 consensus Molecular chaperones GRP170/SIL1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=21.26 E-value=85 Score=30.14 Aligned_cols=28 Identities=21% Similarity=0.301 Sum_probs=25.5
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCCcC
Q 040515 118 AMTRALKQSGLQSHQVDYVNAHATSTPL 145 (251)
Q Consensus 118 a~~~al~~Agi~~~dId~i~~h~~gt~~ 145 (251)
=+.+||++++++.+||+-|++-|-+|+.
T Consensus 350 Pi~dAl~~a~l~ldeIn~ViL~Gg~TRV 377 (902)
T KOG0104|consen 350 PINDALKKAQLSLDEINQVILFGGATRV 377 (902)
T ss_pred hHHHHHHhcCCChhhhheeEEecCcccC
Confidence 3788999999999999999999999983
No 289
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=21.03 E-value=4.8e+02 Score=22.59 Aligned_cols=77 Identities=22% Similarity=0.243 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEE-ecCCCCcCCcHHHHHHHHHHhhccCCCCceeeecccCCccchhhhhhHHHHHHHH
Q 040515 114 GAILAMTRALKQSGLQSHQVDYVN-AHATSTPLGDTVEATAIRTVFSDHATSGSLAFSSTKGAIGHLLGAAGAVEAIFAV 192 (251)
Q Consensus 114 ~~~~a~~~al~~Agi~~~dId~i~-~h~~gt~~~D~~E~~a~~~~~~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~l~~~~ 192 (251)
--..+++.+|+++.++++|++-+. -|-..--.+ ..-+-+..++...+ ..++.+++ .-..+|||=.++.+.
T Consensus 33 Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlG---QapaRQaalgAGlp-~sv~~tTv-----NkvCaSgmKAv~laa 103 (396)
T KOG1390|consen 33 LGSVAIKAALERAVVPPSDVAEVIFGNVLSANLG---QAPARQAALGAGLP-YSVPATTV-----NKVCASGMKAVILAA 103 (396)
T ss_pred HHHHHHHHHHHhcCCCHHHhhhhhhccccccccC---cchHHHHHhhcCCC-cceeeEee-----hhhhhhhHHHHHHHH
Confidence 345789999999999998874322 211111111 11222222332211 11344443 346799999999999
Q ss_pred HHHhhCC
Q 040515 193 LTIHHGV 199 (251)
Q Consensus 193 ~~l~~~~ 199 (251)
++++-|.
T Consensus 104 QsI~~G~ 110 (396)
T KOG1390|consen 104 QSIQTGH 110 (396)
T ss_pred HHHhcCC
Confidence 9998765
No 290
>TIGR02706 P_butyryltrans phosphate butyryltransferase. Members of this family are phosphate butyryltransferase, also called phosphotransbutyrylase. In general, this enzyme is found in butyrate-producing anaerobic bacteria, encoded next to the gene for butyrate kinase. Together, these two enzymes represent what may be the less common of two pathways for butyrate production from butyryl-CoA. The alternative is transfer of the CoA group to acetate by butyryl-CoA:acetate CoA transferase. Cutoffs for this model are set such that the homolog from Thermotoga maritima, whose activity on butyryl-CoA is only 30 % of its activity with acetyl-CoA, scores in the zone between trusted and noice cutoffs.
Probab=20.54 E-value=1e+02 Score=25.91 Aligned_cols=25 Identities=20% Similarity=0.381 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhCCcCEEEEeCcCC
Q 040515 15 HSIGDAARMIQFGDSDVMVAGGTES 39 (251)
Q Consensus 15 ~Al~~A~~~I~~G~~d~alvgg~e~ 39 (251)
.++..|.++++.|++|.++.||+++
T Consensus 74 ~s~~~a~~lv~~G~aD~~vsg~~~T 98 (294)
T TIGR02706 74 KAALLAVRLVSTGKADMLMKGLVDT 98 (294)
T ss_pred HHHHHHHHHHHCCCCCEEEeCCcCH
Confidence 3677899999999999999988753
No 291
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=20.34 E-value=1.1e+02 Score=28.92 Aligned_cols=44 Identities=20% Similarity=0.329 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhc
Q 040515 115 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSD 160 (251)
Q Consensus 115 ~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~ 160 (251)
....++++|++++++++||+.|++-|-++.. +.=...++..|+.
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGGssri--P~v~~~i~~~f~~ 358 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGGSTRI--PKVQSLIKDFFNG 358 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCCCCC--hhHHHHHHHHhCC
Confidence 3456789999999999999999999877765 2233445666653
No 292
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=20.23 E-value=1.1e+02 Score=29.00 Aligned_cols=44 Identities=14% Similarity=0.308 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhhc
Q 040515 115 AILAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFSD 160 (251)
Q Consensus 115 ~~~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~~ 160 (251)
....+.++|++++++++||+.|++-|-++.. +.=...+...|+.
T Consensus 350 ~~~~i~~~L~~a~~~~~~i~~ViLvGGssri--P~v~~~l~~~f~~ 393 (663)
T PTZ00400 350 TIEPCEKCIKDAGVKKDELNDVILVGGMTRM--PKVSETVKKIFGK 393 (663)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCccCC--hHHHHHHHHHhCC
Confidence 3456788999999999999999999877665 3233445666653
No 293
>cd06150 YjgF_YER057c_UK114_like_2 This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.
Probab=20.15 E-value=1.6e+02 Score=20.18 Aligned_cols=38 Identities=13% Similarity=0.232 Sum_probs=25.9
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCCCcCCcHHHHHHHHHHhh
Q 040515 117 LAMTRALKQSGLQSHQVDYVNAHATSTPLGDTVEATAIRTVFS 159 (251)
Q Consensus 117 ~a~~~al~~Agi~~~dId~i~~h~~gt~~~D~~E~~a~~~~~~ 159 (251)
+-+++.|+.+|.+.+||-.+..+= .|..+...+.+++.
T Consensus 36 ~nl~~~L~~~G~~~~dvvk~~vyl-----~d~~~~~~~~~~~~ 73 (105)
T cd06150 36 AKIDALLAEAGSDKSRILSATIWL-----ADMADFAAMNAVWD 73 (105)
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEE-----ccHHHHHHHHHHHH
Confidence 456788999999999987766662 34445555555544
Done!