Your job contains 1 sequence.
>040518
MSGSNQKQWSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLMEDLE
LIEFGFEPVSIDYHQQYKNED
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040518
(81 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2028461 - symbol:AT1G49010 species:3702 "Arabi... 155 8.6e-11 1
UNIPROTKB|Q58FS3 - symbol:RAD "Transcription factor RADIA... 127 2.6e-08 1
TAIR|locus:2074723 - symbol:AT3G11280 species:3702 "Arabi... 130 3.2e-08 1
TAIR|locus:2166459 - symbol:AT5G05790 species:3702 "Arabi... 127 8.0e-08 1
TAIR|locus:2042872 - symbol:AT2G38090 species:3702 "Arabi... 126 1.2e-07 1
UNIPROTKB|Q8S9H7 - symbol:DIVARICATA "Transcription facto... 126 1.3e-07 1
TAIR|locus:2025182 - symbol:RL6 "RAD-like 6" species:3702... 120 1.4e-07 1
TAIR|locus:2136283 - symbol:RL1 "RAD-like 1" species:3702... 117 2.9e-07 1
TAIR|locus:2150149 - symbol:AT5G01200 species:3702 "Arabi... 117 9.6e-07 1
TAIR|locus:2016417 - symbol:RL5 "RAD-like 5" species:3702... 112 1.0e-06 1
TAIR|locus:2171494 - symbol:AT5G47290 "AT5G47290" species... 112 1.0e-06 1
TAIR|locus:2154508 - symbol:AT5G58900 species:3702 "Arabi... 116 1.5e-06 1
TAIR|locus:2159607 - symbol:AT5G08520 species:3702 "Arabi... 116 1.6e-06 1
TAIR|locus:2049374 - symbol:MEE3 "MATERNAL EFFECT EMBRYO ... 106 4.3e-06 1
TAIR|locus:4010713631 - symbol:RL4 "RAD-like 4" species:3... 100 1.9e-05 1
TAIR|locus:2115260 - symbol:RL3 "RAD-like 3" species:3702... 100 1.9e-05 1
TAIR|locus:2171711 - symbol:AT5G23650 species:3702 "Arabi... 106 2.5e-05 1
WB|WBGene00018836 - symbol:F54F2.9 species:6239 "Caenorha... 100 0.00016 1
UNIPROTKB|P34454 - symbol:F54F2.9 "Uncharacterized protei... 100 0.00016 1
>TAIR|locus:2028461 [details] [associations]
symbol:AT1G49010 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0003677 GO:GO:0009651
GO:GO:0003700 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009739 EMBL:AC016041 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
EMBL:AY086906 EMBL:AY519528 EMBL:BT024862 IPI:IPI00544296
PIR:F96527 RefSeq:NP_564537.1 UniGene:At.38318
ProteinModelPortal:Q9M9A3 SMR:Q9M9A3 STRING:Q9M9A3 PRIDE:Q9M9A3
EnsemblPlants:AT1G49010.1 GeneID:841324 KEGG:ath:AT1G49010
TAIR:At1g49010 eggNOG:NOG253185 InParanoid:Q9M9A3 OMA:YVVPVAY
PhylomeDB:Q9M9A3 ProtClustDB:CLSN2688585 ArrayExpress:Q9M9A3
Genevestigator:Q9M9A3 Uniprot:Q9M9A3
Length = 314
Score = 155 (59.6 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 29/70 (41%), Positives = 50/70 (71%)
Query: 9 WSWEENKAFENGVALYYKEGQ--DEEWVKIHSLVPTKTIDEIKVHFKKLMEDLELIEFGF 66
WS EE KAFEN +AL+ E + +++W K+ S+VP+K ++E+K H++ L+ED++ IE G
Sbjct: 8 WSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIENGQ 67
Query: 67 EPVSIDYHQQ 76
P+ +H++
Sbjct: 68 VPLPRYHHRK 77
>UNIPROTKB|Q58FS3 [details] [associations]
symbol:RAD "Transcription factor RADIALIS" species:4151
"Antirrhinum majus" [GO:0009908 "flower development" evidence=IMP]
[GO:0048262 "determination of dorsal/ventral asymmetry"
evidence=IMP] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908 GO:GO:0048262
EMBL:AY954971 PDB:2CJJ PDBsum:2CJJ ProteinModelPortal:Q58FS3
SMR:Q58FS3 EvolutionaryTrace:Q58FS3 Uniprot:Q58FS3
Length = 93
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 3 GSNQKQWSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLMEDLELI 62
GS + WS +ENKAFE +A+Y K+ D W + V +T +E+K H++ L+ED++ I
Sbjct: 6 GSG-RPWSAKENKAFERALAVYDKDTPDR-WANVARAVEGRTPEEVKKHYEILVEDIKYI 63
Query: 63 EFGFEP 68
E G P
Sbjct: 64 ESGKVP 69
>TAIR|locus:2074723 [details] [associations]
symbol:AT3G11280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017884 PROSITE:PS51293 EMBL:AC073395
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 UniGene:At.23548 EMBL:AY056180 EMBL:AY091265
EMBL:AY550308 IPI:IPI00541857 RefSeq:NP_187737.1 RefSeq:NP_850558.1
ProteinModelPortal:Q9C773 SMR:Q9C773 STRING:Q9C773 PRIDE:Q9C773
DNASU:820299 EnsemblPlants:AT3G11280.1 EnsemblPlants:AT3G11280.2
GeneID:820299 KEGG:ath:AT3G11280 TAIR:At3g11280 InParanoid:Q9C773
OMA:FEAAINF PhylomeDB:Q9C773 ProtClustDB:CLSN2684400
ArrayExpress:Q9C773 Genevestigator:Q9C773 Uniprot:Q9C773
Length = 263
Score = 130 (50.8 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 1 MSGSNQKQWSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLMEDLE 60
+ S+ W+ EENK FE +A+Y ++ D W K+ S++P KT+ ++ + KL ED+
Sbjct: 25 LHSSSSGSWTKEENKMFERALAIYAEDSPDR-WFKVASMIPGKTVFDVMKQYSKLEEDVF 83
Query: 61 LIEFGFEPV 69
IE G P+
Sbjct: 84 DIEAGRVPI 92
>TAIR|locus:2166459 [details] [associations]
symbol:AT5G05790 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB005237
HOGENOM:HOG000237920 ProtClustDB:CLSN2684400 EMBL:AY519531
EMBL:BT026054 IPI:IPI00544524 RefSeq:NP_196198.1 UniGene:At.32952
ProteinModelPortal:Q9FFJ9 SMR:Q9FFJ9 EnsemblPlants:AT5G05790.1
GeneID:830464 KEGG:ath:AT5G05790 TAIR:At5g05790 eggNOG:NOG242423
InParanoid:Q9FFJ9 OMA:ISRNFVG PhylomeDB:Q9FFJ9 ArrayExpress:Q9FFJ9
Genevestigator:Q9FFJ9 Uniprot:Q9FFJ9
Length = 277
Score = 127 (49.8 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 9 WSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLMEDLELIEFGFEP 68
W+ EENK FE +A+Y + D W K+ +++P KTI ++ + KL EDL IE G P
Sbjct: 31 WTKEENKKFERALAVYADDTPDR-WFKVAAMIPGKTISDVMRQYSKLEEDLFDIEAGLVP 89
Query: 69 V 69
+
Sbjct: 90 I 90
>TAIR|locus:2042872 [details] [associations]
symbol:AT2G38090 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006122 EMBL:AY519529
EMBL:AK118135 IPI:IPI00542058 RefSeq:NP_181344.2 UniGene:At.46819
ProteinModelPortal:Q8GXN7 SMR:Q8GXN7 EnsemblPlants:AT2G38090.1
GeneID:818387 KEGG:ath:AT2G38090 TAIR:At2g38090
HOGENOM:HOG000237920 InParanoid:Q8GXN7 OMA:HRQFLMG PhylomeDB:Q8GXN7
ProtClustDB:CLSN2918198 Genevestigator:Q8GXN7 Uniprot:Q8GXN7
Length = 298
Score = 126 (49.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 8 QWSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLMEDLELIEFGFE 67
+W+ EENK FEN +A Y K+ D W ++ +++P KT+ ++ +++L ED+ IE G
Sbjct: 28 KWTAEENKKFENALAFYDKDTPDR-WSRVAAMLPGKTVGDVIKQYRELEEDVSDIEAGLI 86
Query: 68 PV 69
P+
Sbjct: 87 PI 88
>UNIPROTKB|Q8S9H7 [details] [associations]
symbol:DIVARICATA "Transcription factor DIVARICATA"
species:4151 "Antirrhinum majus" [GO:0009908 "flower development"
evidence=IMP] [GO:0048262 "determination of dorsal/ventral
asymmetry" evidence=IMP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048262 EMBL:AY077453
ProteinModelPortal:Q8S9H7 Uniprot:Q8S9H7
Length = 307
Score = 126 (49.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 8 QWSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLMEDLELIEFGFE 67
+W+ ENKAFEN +A++ E W ++ VP KT+ ++ +K+L +D+ IE GF
Sbjct: 25 RWTAAENKAFENALAVF-DENTPNRWERVAERVPGKTVGDVMRQYKELEDDVSSIEAGFV 83
Query: 68 PV 69
PV
Sbjct: 84 PV 85
>TAIR|locus:2025182 [details] [associations]
symbol:RL6 "RAD-like 6" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
SUPFAM:SSF46689 PROSITE:PS51293 EMBL:AC025814 HOGENOM:HOG000238103
EMBL:AY519525 EMBL:DQ395346 EMBL:BT026091 IPI:IPI00526625
IPI:IPI00775691 PIR:H96782 RefSeq:NP_001077825.1 RefSeq:NP_177661.1
UniGene:At.64902 ProteinModelPortal:Q1A173 SMR:Q1A173
EnsemblPlants:AT1G75250.2 GeneID:843862 KEGG:ath:AT1G75250
TAIR:At1g75250 eggNOG:NOG253755 InParanoid:Q9FRL6 OMA:PLPNYKT
ProtClustDB:CLSN2682492 ArrayExpress:Q1A173 Genevestigator:Q1A173
Uniprot:Q1A173
Length = 97
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 2 SGSNQKQWSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLMEDLEL 61
S S+ W++ +NK FE +A+Y K+ D W + V KT++E+K H+ L+EDL
Sbjct: 5 SRSSISPWTFSQNKMFERALAVYDKDTPDR-WHNVAKAVGGKTVEEVKRHYDILVEDLIN 63
Query: 62 IEFGFEPV 69
IE G P+
Sbjct: 64 IETGRVPL 71
>TAIR|locus:2136283 [details] [associations]
symbol:RL1 "RAD-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002687 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 EMBL:AL161594 EMBL:AL050351
EMBL:AY519527 EMBL:BT024650 EMBL:DQ375231 IPI:IPI00518965
PIR:T08573 RefSeq:NP_195636.2 UniGene:At.64218
ProteinModelPortal:F4JVB8 SMR:F4JVB8 EnsemblPlants:AT4G39250.1
GeneID:830081 KEGG:ath:AT4G39250 TAIR:At4g39250 eggNOG:NOG329125
HOGENOM:HOG000238103 InParanoid:Q0NZY1 OMA:RHYEILV Uniprot:F4JVB8
Length = 100
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 1 MSGSNQKQWSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLMEDLE 60
MS + W+ ++NKAFE +A Y ++ + W + +V KT +E+K H++ L++D+
Sbjct: 6 MSSQSSGSWTAKQNKAFEQALATYDQDTPNR-WQNVAKVVGGKTTEEVKRHYELLVQDIN 64
Query: 61 LIEFGFEP 68
IE G P
Sbjct: 65 SIENGHVP 72
>TAIR|locus:2150149 [details] [associations]
symbol:AT5G01200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL137189
HOGENOM:HOG000237920 EMBL:AY519530 IPI:IPI00517812 PIR:T45960
RefSeq:NP_195740.1 UniGene:At.27639 ProteinModelPortal:Q9LFB6
SMR:Q9LFB6 EnsemblPlants:AT5G01200.1 GeneID:831676
KEGG:ath:AT5G01200 TAIR:At5g01200 eggNOG:NOG260690
InParanoid:Q9LFB6 OMA:SAANSDY PhylomeDB:Q9LFB6
ProtClustDB:CLSN2916637 ArrayExpress:Q9LFB6 Genevestigator:Q9LFB6
Uniprot:Q9LFB6
Length = 267
Score = 117 (46.2 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 9 WSWEENKAFENGVALYYKEGQD--EEWVKIHSLVPTKTIDEIKVHFKKLMEDLELIEFGF 66
W+ EENK FE AL Y + +D E W KI L+P KT+ ++ +K+L +D+ IE G
Sbjct: 30 WTAEENKRFEK--ALAYLDDKDNLESWSKIADLIPGKTVADVIKRYKELEDDVSDIEAGL 87
Query: 67 EPV 69
P+
Sbjct: 88 IPI 90
>TAIR|locus:2016417 [details] [associations]
symbol:RL5 "RAD-like 5" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
SUPFAM:SSF46689 PROSITE:PS51293 InterPro:IPR017877 EMBL:AC025808
HOGENOM:HOG000238103 EMBL:AY519524 EMBL:DQ395347 EMBL:AK119034
EMBL:BT005657 IPI:IPI00517217 IPI:IPI00526097 RefSeq:NP_564087.2
UniGene:At.41742 ProteinModelPortal:Q8GW75 SMR:Q8GW75
EnsemblPlants:AT1G19510.1 GeneID:838537 KEGG:ath:AT1G19510
TAIR:At1g19510 eggNOG:NOG289750 InParanoid:Q8GW75 OMA:HFEQLVH
PhylomeDB:Q8GW75 Genevestigator:Q8GW75 Uniprot:Q8GW75
Length = 100
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 2 SGSNQKQWSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLMEDLEL 61
S S+ W+ ++NK FE +A+Y K+ D W + V +K+ +E+K H+ L+EDL
Sbjct: 5 SMSSSSSWTSKQNKMFERALAVYDKDTPDR-WQNVAKAVGSKSAEEVKRHYDILVEDLMN 63
Query: 62 IEFGFEPV 69
IE P+
Sbjct: 64 IEQDLVPL 71
>TAIR|locus:2171494 [details] [associations]
symbol:AT5G47290 "AT5G47290" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB018117
IPI:IPI00548425 RefSeq:NP_199540.1 UniGene:At.65655
ProteinModelPortal:Q9LVT0 SMR:Q9LVT0 EnsemblPlants:AT5G47290.1
GeneID:834776 KEGG:ath:AT5G47290 TAIR:At5g47290 PhylomeDB:Q9LVT0
ProtClustDB:CLSN2686360 Genevestigator:Q9LVT0 Uniprot:Q9LVT0
Length = 96
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 1 MSGSNQKQWSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLMEDLE 60
M+G+ +W+WEENKAFE VAL + I + + T ++DEIK H+ KL++D+
Sbjct: 1 MAGT--MKWTWEENKAFE--VALVQVPDSPAKLEIIAAQMRT-SVDEIKYHYDKLLQDIA 55
Query: 61 LIEFGFEPV 69
+IE G + V
Sbjct: 56 VIESGRDVV 64
>TAIR|locus:2154508 [details] [associations]
symbol:AT5G58900 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB016885
HOGENOM:HOG000237920 EMBL:BT005473 EMBL:AY519533 EMBL:AK118891
IPI:IPI00547099 RefSeq:NP_200698.1 UniGene:At.7757
ProteinModelPortal:Q9FIL9 SMR:Q9FIL9 DNASU:836007
EnsemblPlants:AT5G58900.1 GeneID:836007 KEGG:ath:AT5G58900
TAIR:At5g58900 eggNOG:NOG325121 InParanoid:Q9FIL9 OMA:PFTLDWA
PhylomeDB:Q9FIL9 ProtClustDB:CLSN2914846 ArrayExpress:Q9FIL9
Genevestigator:Q9FIL9 Uniprot:Q9FIL9
Length = 288
Score = 116 (45.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 9 WSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLMEDLELIEFGFEP 68
W+ ENKAFEN +A+Y + + W K+ +++P KT+ ++ + L D+ IE G P
Sbjct: 34 WTAAENKAFENALAVY-DDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVSSIEAGLIP 92
Query: 69 V 69
V
Sbjct: 93 V 93
>TAIR|locus:2159607 [details] [associations]
symbol:AT5G08520 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB006697
HOGENOM:HOG000237920 EMBL:AY072090 EMBL:AY096571 EMBL:AY519532
IPI:IPI00516280 RefSeq:NP_196469.1 UniGene:At.8762
ProteinModelPortal:Q9FNN6 SMR:Q9FNN6 STRING:Q9FNN6 PaxDb:Q9FNN6
PRIDE:Q9FNN6 EnsemblPlants:AT5G08520.1 GeneID:830751
KEGG:ath:AT5G08520 TAIR:At5g08520 eggNOG:NOG259915
InParanoid:Q9FNN6 OMA:NSMNRER PhylomeDB:Q9FNN6
ProtClustDB:CLSN2687300 ArrayExpress:Q9FNN6 Genevestigator:Q9FNN6
Uniprot:Q9FNN6
Length = 298
Score = 116 (45.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 4 SNQKQWSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLMEDLELIE 63
S+ WS E++ AFE +A E + E W KI + VP K++++IK H++ L+ED+ IE
Sbjct: 7 SDGSVWSREDDIAFERALANNTDESE-ERWEKIAADVPGKSVEQIKEHYELLVEDVTRIE 65
Query: 64 FGFEPV 69
G P+
Sbjct: 66 SGCVPL 71
>TAIR|locus:2049374 [details] [associations]
symbol:MEE3 "MATERNAL EFFECT EMBRYO ARREST 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IMP] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0010114 "response to red light" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0010114 GO:GO:0009630
GO:GO:0009793 SUPFAM:SSF46689 PROSITE:PS51293 InterPro:IPR017877
EMBL:AC007119 HOGENOM:HOG000238103 EMBL:AY519526 EMBL:BT008554
EMBL:BT008698 EMBL:AK229516 IPI:IPI00543218 PIR:G84603
RefSeq:NP_179759.1 UniGene:At.43298 ProteinModelPortal:Q9SIJ5
SMR:Q9SIJ5 IntAct:Q9SIJ5 PRIDE:Q9SIJ5 EnsemblPlants:AT2G21650.1
GeneID:816703 KEGG:ath:AT2G21650 TAIR:At2g21650 eggNOG:NOG308303
InParanoid:Q9SIJ5 OMA:KHIESGH PhylomeDB:Q9SIJ5
ProtClustDB:CLSN2683609 Genevestigator:Q9SIJ5 Uniprot:Q9SIJ5
Length = 101
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 1 MSGSNQKQWSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLMEDLE 60
MS W+ ++NKAFE +A+Y ++ D W + V KT +E K + L+ D+E
Sbjct: 6 MSSYGSGSWTVKQNKAFERALAVYDQDTPDR-WHNVARAVGGKTPEEAKRQYDLLVRDIE 64
Query: 61 LIEFGFEPVSIDY 73
IE G P DY
Sbjct: 65 SIENGHVPFP-DY 76
>TAIR|locus:4010713631 [details] [associations]
symbol:RL4 "RAD-like 4" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AC006439 EMBL:DQ487660 EMBL:DQ652756
EMBL:DQ395345 IPI:IPI00846254 RefSeq:NP_001077912.1
UniGene:At.49279 ProteinModelPortal:Q1G3C4 SMR:Q1G3C4 PRIDE:Q1G3C4
EnsemblPlants:AT2G18328.1 GeneID:5007884 KEGG:ath:AT2G18328
TAIR:At2g18328 eggNOG:NOG285168 OMA:EEDVGHI PhylomeDB:Q1G3C4
ProtClustDB:CLSN2920147 Genevestigator:Q1G3C4 Uniprot:Q1G3C4
Length = 77
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 2 SGSNQKQWSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLMEDLEL 61
S + W+ E+K FE +A + K+ D W KI V K+ +E+K H++ L+ D+
Sbjct: 4 SSMSTSSWTAREDKQFEMALAKFDKDTPDR-WQKIARAVGGKSTEEVKRHYELLLRDVND 62
Query: 62 IEFGFEP 68
IE G P
Sbjct: 63 IESGRYP 69
>TAIR|locus:2115260 [details] [associations]
symbol:RL3 "RAD-like 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AL161589 eggNOG:KOG0724 EMBL:Z99708
EMBL:BT010770 EMBL:BT011255 IPI:IPI00524086 IPI:IPI00944270
PIR:G85431 RefSeq:NP_195375.4 UniGene:At.47987
ProteinModelPortal:Q6NNN0 SMR:Q6NNN0 IntAct:Q6NNN0 PRIDE:Q6NNN0
GeneID:829809 KEGG:ath:AT4G36570 TAIR:At4g36570 PhylomeDB:Q6NNN0
Genevestigator:Q6NNN0 Uniprot:Q6NNN0
Length = 81
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 2 SGSNQKQWSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLMEDLEL 61
S S+ W+ +ENK FE +A Y ++ D W + V K+ +E++ H++ L+ D+
Sbjct: 5 SMSSSASWTRKENKLFERALATYDQDTPDR-WHNVARAVGGKSAEEVRRHYELLIRDVND 63
Query: 62 IEFGFEP 68
IE G P
Sbjct: 64 IESGRYP 70
>TAIR|locus:2171711 [details] [associations]
symbol:AT5G23650 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB025633
HOGENOM:HOG000237920 EMBL:DQ056685 IPI:IPI00534696
RefSeq:NP_197754.1 UniGene:At.54959 ProteinModelPortal:Q9LT00
SMR:Q9LT00 EnsemblPlants:AT5G23650.1 GeneID:832430
KEGG:ath:AT5G23650 TAIR:At5g23650 eggNOG:NOG311780
InParanoid:Q9LT00 OMA:HYNILAR PhylomeDB:Q9LT00
ProtClustDB:CLSN2914851 Genevestigator:Q9LT00 Uniprot:Q9LT00
Length = 337
Score = 106 (42.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 9 WSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLMEDLELIEFG 65
WS +++ AFE +A+Y + + W KI ++VP KT++++ H+ L D+ LIE G
Sbjct: 13 WSKDDDIAFEKALAIY-NDKTEIRWKKIATVVPGKTLEQVIEHYNILARDVMLIESG 68
>WB|WBGene00018836 [details] [associations]
symbol:F54F2.9 species:6239 "Caenorhabditis elegans"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0031072 "heat
shock protein binding" evidence=IEA] [GO:0006457 "protein folding"
evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
Pfam:PF00226 GO:GO:0016021 GO:GO:0006457 GO:GO:0003677
GO:GO:0031965 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 InterPro:IPR017877 PROSITE:PS50090 eggNOG:COG2214
HOGENOM:HOG000231867 KO:K09521 GeneTree:ENSGT00530000063419
EMBL:FO081385 PIR:S44823 RefSeq:NP_498949.2
ProteinModelPortal:P34454 SMR:P34454 PaxDb:P34454
EnsemblMetazoa:F54F2.9 GeneID:176241 KEGG:cel:CELE_F54F2.9
UCSC:F54F2.9 CTD:176241 WormBase:F54F2.9 InParanoid:P34454
OMA:IGTIAHY NextBio:891724 Uniprot:P34454
Length = 414
Score = 100 (40.3 bits), Expect = 0.00016, P = 0.00016
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 5 NQKQWSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLME 57
++ WS E KAFE + Y K G DE W +I + +KT ++ V FK+L E
Sbjct: 353 SEDDWSQAEQKAFETALQKYPK-GTDERWERISEEIGSKTKKQVMVRFKQLAE 404
>UNIPROTKB|P34454 [details] [associations]
symbol:F54F2.9 "Uncharacterized protein F54F2.9"
species:6239 "Caenorhabditis elegans" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
InterPro:IPR001623 Pfam:PF00226 GO:GO:0016021 GO:GO:0006457
GO:GO:0003677 GO:GO:0031965 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565
PROSITE:PS00636 PROSITE:PS50076 InterPro:IPR017877 PROSITE:PS50090
eggNOG:COG2214 HOGENOM:HOG000231867 KO:K09521
GeneTree:ENSGT00530000063419 EMBL:FO081385 PIR:S44823
RefSeq:NP_498949.2 ProteinModelPortal:P34454 SMR:P34454
PaxDb:P34454 EnsemblMetazoa:F54F2.9 GeneID:176241
KEGG:cel:CELE_F54F2.9 UCSC:F54F2.9 CTD:176241 WormBase:F54F2.9
InParanoid:P34454 OMA:IGTIAHY NextBio:891724 Uniprot:P34454
Length = 414
Score = 100 (40.3 bits), Expect = 0.00016, P = 0.00016
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 5 NQKQWSWEENKAFENGVALYYKEGQDEEWVKIHSLVPTKTIDEIKVHFKKLME 57
++ WS E KAFE + Y K G DE W +I + +KT ++ V FK+L E
Sbjct: 353 SEDDWSQAEQKAFETALQKYPK-GTDERWERISEEIGSKTKKQVMVRFKQLAE 404
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.132 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 81 81 0.00091 102 3 11 23 0.50 29
29 0.42 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 546 (58 KB)
Total size of DFA: 129 KB (2082 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.30u 0.12s 11.42t Elapsed: 00:00:01
Total cpu time: 11.31u 0.12s 11.43t Elapsed: 00:00:01
Start: Fri May 10 23:10:17 2013 End: Fri May 10 23:10:18 2013