Query 040529
Match_columns 806
No_of_seqs 657 out of 3489
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 14:56:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040529.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040529hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 100.0 3.1E-40 1.1E-44 351.9 21.5 253 326-608 11-273 (279)
2 3hve_A Gigaxonin; ubiquitin, c 100.0 2.3E-39 8E-44 340.7 11.7 242 326-597 10-255 (256)
3 3htm_A Speckle-type POZ protei 99.9 6.9E-25 2.4E-29 215.9 16.7 152 332-492 19-170 (172)
4 3hqi_A Speckle-type POZ protei 99.9 8.7E-23 3E-27 220.7 16.0 152 333-493 160-311 (312)
5 4eoz_A Speckle-type POZ protei 99.9 7.8E-23 2.7E-27 195.2 7.9 136 332-475 10-145 (145)
6 2if5_A Zinc finger and BTB dom 99.8 4.9E-21 1.7E-25 176.6 12.3 116 326-448 4-119 (120)
7 2z8h_A Transcription regulator 99.8 7.4E-21 2.5E-25 180.0 13.4 123 325-456 14-137 (138)
8 1r29_A B-cell lymphoma 6 prote 99.8 1.2E-20 4.2E-25 175.8 13.7 117 326-450 8-125 (127)
9 2vkp_A BTB/POZ domain-containi 99.8 2.5E-20 8.5E-25 168.8 11.6 107 340-452 1-109 (109)
10 2ppi_A Gigaxonin; BTB domain, 99.8 1.7E-20 5.7E-25 178.8 10.8 117 326-449 26-144 (144)
11 3b84_A Zinc finger and BTB dom 99.8 8.6E-21 2.9E-25 174.7 8.2 111 329-450 6-116 (119)
12 2yy9_A Zinc finger and BTB dom 99.8 1.6E-20 5.4E-25 176.9 9.5 117 329-456 7-123 (135)
13 1buo_A POZ domain, protein (pr 99.8 7E-20 2.4E-24 169.2 12.4 113 327-451 8-120 (121)
14 1buo_A POZ domain, protein (pr 99.8 1.4E-20 4.8E-25 173.8 7.3 111 187-299 7-119 (121)
15 2vpk_A Myoneurin; transcriptio 99.8 4.1E-20 1.4E-24 169.4 10.0 109 331-450 6-116 (116)
16 3b84_A Zinc finger and BTB dom 99.8 1.7E-20 5.9E-25 172.7 6.5 109 189-299 5-116 (119)
17 2if5_A Zinc finger and BTB dom 99.8 2.9E-20 1E-24 171.4 8.1 109 188-298 5-120 (120)
18 1r29_A B-cell lymphoma 6 prote 99.8 5E-20 1.7E-24 171.7 9.4 113 185-299 6-125 (127)
19 2vpk_A Myoneurin; transcriptio 99.8 2.6E-20 8.8E-25 170.7 6.6 107 190-298 4-115 (116)
20 2z8h_A Transcription regulator 99.8 7.2E-20 2.5E-24 173.2 9.2 113 184-298 12-130 (138)
21 3ohu_A Transcription regulator 99.8 2.9E-20 1E-24 172.7 5.6 114 326-448 11-125 (125)
22 2yy9_A Zinc finger and BTB dom 99.8 3.4E-20 1.2E-24 174.6 6.1 109 189-299 6-117 (135)
23 2q81_A MIZ-1 protein; BTB/POZ 99.8 4.7E-20 1.6E-24 169.8 6.7 110 328-449 8-117 (119)
24 2q81_A MIZ-1 protein; BTB/POZ 99.8 1.6E-20 5.4E-25 172.9 3.4 108 189-298 8-117 (119)
25 3m5b_A Zinc finger and BTB dom 99.8 8.9E-20 3.1E-24 167.6 7.6 102 192-299 16-117 (119)
26 2ihc_A Transcription regulator 99.8 5E-20 1.7E-24 170.9 5.6 114 327-449 9-123 (124)
27 3ga1_A Nucleus accumbens-assoc 99.8 8.4E-20 2.9E-24 170.6 7.0 115 326-451 12-127 (129)
28 2ppi_A Gigaxonin; BTB domain, 99.8 1.1E-19 3.9E-24 172.9 7.2 111 186-298 25-144 (144)
29 3ga1_A Nucleus accumbens-assoc 99.8 7.2E-20 2.5E-24 171.1 4.9 110 188-299 13-126 (129)
30 3ohu_A Transcription regulator 99.8 8.7E-20 3E-24 169.5 4.7 110 186-297 10-125 (125)
31 2ihc_A Transcription regulator 99.8 1.2E-19 4.1E-24 168.3 4.2 110 187-298 8-123 (124)
32 3htm_A Speckle-type POZ protei 99.8 3.1E-18 1.1E-22 168.1 11.9 107 191-299 17-130 (172)
33 3i3n_A Kelch-like protein 11; 99.7 1.5E-17 5.2E-22 176.5 15.4 114 186-299 10-137 (279)
34 2vkp_A BTB/POZ domain-containi 99.7 1.5E-18 5E-23 157.1 6.3 97 202-299 2-107 (109)
35 3m5b_A Zinc finger and BTB dom 99.7 5.2E-18 1.8E-22 155.8 9.8 105 328-450 13-117 (119)
36 3fkc_A Transcriptional regulat 99.7 7.6E-18 2.6E-22 154.1 10.6 105 326-442 10-115 (116)
37 3fkc_A Transcriptional regulat 99.7 1.5E-18 5.3E-23 158.8 5.2 102 188-291 11-115 (116)
38 4eoz_A Speckle-type POZ protei 99.7 1.4E-18 4.8E-23 165.6 3.6 113 191-305 8-128 (145)
39 3hve_A Gigaxonin; ubiquitin, c 99.7 9.2E-18 3.2E-22 175.9 6.9 117 187-305 10-136 (256)
40 3hqi_A Speckle-type POZ protei 99.7 4E-17 1.4E-21 176.2 10.9 107 191-299 157-270 (312)
41 2eqx_A Kelch repeat and BTB do 99.5 2.6E-15 9E-20 134.4 4.7 96 448-569 4-99 (105)
42 2ast_A S-phase kinase-associat 99.2 2.3E-11 7.9E-16 117.2 11.0 105 350-462 3-135 (159)
43 4ajy_C Transcription elongatio 98.9 2.7E-09 9.1E-14 93.6 9.4 81 350-437 4-97 (97)
44 1fs1_B SKP1, cyclin A/CDK2-ass 98.8 1.9E-08 6.5E-13 94.6 9.0 101 350-462 4-130 (141)
45 2ast_A S-phase kinase-associat 98.7 7.5E-09 2.6E-13 99.5 5.2 87 211-299 3-124 (159)
46 2p1m_A SKP1-like protein 1A; F 98.6 2.2E-08 7.4E-13 96.3 4.0 102 350-462 6-134 (160)
47 4ajy_C Transcription elongatio 98.5 1.2E-07 4.2E-12 83.0 5.1 74 210-285 3-96 (97)
48 1fs1_B SKP1, cyclin A/CDK2-ass 98.4 2.2E-07 7.4E-12 87.3 4.3 87 211-299 4-119 (141)
49 2p1m_A SKP1-like protein 1A; F 98.3 1.6E-07 5.4E-12 90.2 2.3 87 211-299 6-123 (160)
50 1hv2_A Elongin C, ELC1; protei 98.1 1.1E-05 3.7E-10 70.7 9.8 86 349-437 5-99 (99)
51 3v7d_A Suppressor of kinetocho 98.0 3.1E-05 1.1E-09 74.7 10.9 106 349-456 8-137 (169)
52 2fnj_C Transcription elongatio 98.0 1.8E-05 6.1E-10 68.8 8.0 81 350-437 3-96 (96)
53 2j1a_A Hyaluronidase, CBM32; p 97.9 7.3E-05 2.5E-09 70.3 12.3 98 697-803 50-150 (150)
54 3f2z_A Uncharacterized protein 97.9 7.5E-05 2.6E-09 71.4 12.4 96 698-804 53-148 (159)
55 3ggl_A Putative chitobiase; X- 97.9 9.5E-05 3.3E-09 71.5 12.4 97 697-804 62-158 (169)
56 3drz_A BTB/POZ domain-containi 97.9 9.4E-05 3.2E-09 65.7 11.2 95 349-450 7-106 (107)
57 2jda_A Yecbm32; hypothetical p 97.7 0.00037 1.3E-08 65.1 13.6 93 700-804 44-136 (145)
58 2zwa_A Leucine carboxyl methyl 97.6 2.8E-05 9.6E-10 92.6 4.2 138 554-708 321-487 (695)
59 4a41_A GH89_CBM32-5, alpha-N-a 97.6 0.0003 1E-08 67.4 10.5 92 698-802 69-160 (161)
60 2xn4_A Kelch-like protein 2; s 97.5 0.00037 1.3E-08 73.4 11.7 70 638-708 109-192 (302)
61 4gwi_A Lectinolysin, platelet 97.5 0.00038 1.3E-08 66.0 9.3 97 694-805 49-147 (153)
62 2vpj_A Kelch-like protein 12; 97.4 0.0013 4.5E-08 69.0 14.3 70 638-708 160-241 (301)
63 2vpj_A Kelch-like protein 12; 97.4 0.00066 2.2E-08 71.4 11.5 70 638-708 63-147 (301)
64 2xn4_A Kelch-like protein 2; s 97.4 0.00082 2.8E-08 70.7 11.8 70 638-708 156-239 (302)
65 3ii7_A Kelch-like protein 7; p 97.4 0.00086 2.9E-08 70.7 12.0 70 638-708 150-235 (306)
66 1zgk_A Kelch-like ECH-associat 97.4 0.001 3.4E-08 70.5 12.1 70 638-708 169-250 (308)
67 1vcb_B Protein (elongin C); tu 97.3 0.00057 2E-08 61.0 8.3 87 349-437 18-112 (112)
68 3ii7_A Kelch-like protein 7; p 97.3 0.001 3.5E-08 70.2 11.8 70 638-708 102-188 (306)
69 4a3z_A GH89_CBM32, alpha-N-ace 97.2 0.0019 6.4E-08 61.7 11.3 94 698-802 65-160 (161)
70 1zgk_A Kelch-like ECH-associat 97.1 0.0012 4E-08 69.9 9.8 70 638-708 216-297 (308)
71 3v7d_A Suppressor of kinetocho 97.1 0.00027 9.3E-09 68.1 4.3 88 210-299 8-131 (169)
72 4asc_A Kelch repeat and BTB do 97.1 0.0012 4.3E-08 69.9 9.9 69 639-708 150-231 (315)
73 2fnj_C Transcription elongatio 97.1 0.00034 1.2E-08 60.7 4.3 74 211-286 3-96 (96)
74 3drz_A BTB/POZ domain-containi 97.1 0.0016 5.3E-08 57.7 8.1 85 211-298 8-105 (107)
75 2woz_A Kelch repeat and BTB do 97.0 0.001 3.5E-08 70.6 7.6 66 638-704 207-293 (318)
76 2yfu_A Carbohydrate binding fa 96.9 0.0015 5.1E-08 61.6 7.1 92 699-804 44-139 (155)
77 4asc_A Kelch repeat and BTB do 96.8 0.0041 1.4E-07 65.8 10.4 69 639-708 100-184 (315)
78 4a42_A GH89_CBM32-4, alpha-N-a 96.8 0.0054 1.8E-07 57.7 10.0 88 698-803 61-148 (149)
79 1hv2_A Elongin C, ELC1; protei 96.8 0.00081 2.8E-08 58.6 3.6 74 211-286 6-99 (99)
80 2woz_A Kelch repeat and BTB do 96.7 0.0041 1.4E-07 65.9 9.8 70 638-708 110-194 (318)
81 3hnm_A Putative chitobiase; PS 96.7 0.005 1.7E-07 59.4 9.2 94 698-802 63-161 (172)
82 4a4a_A Alpha-N-acetylglucosami 96.7 0.0093 3.2E-07 71.2 12.9 94 697-804 60-153 (914)
83 2uvk_A YJHT; unknown function, 96.7 0.0019 6.6E-08 69.6 6.7 70 639-708 67-187 (357)
84 2wuh_A Discoidin domain recept 96.5 0.0076 2.6E-07 58.5 9.2 95 699-804 72-173 (178)
85 3drx_A BTB/POZ domain-containi 96.4 0.0077 2.6E-07 58.9 8.5 95 349-450 13-112 (202)
86 2v5d_A O-GLCNACASE NAGJ; famil 96.4 0.008 2.7E-07 71.4 10.0 98 697-803 637-737 (737)
87 1k12_A Lectin; beta barrel, pr 96.4 0.0079 2.7E-07 57.2 8.1 96 694-804 53-153 (158)
88 2zwa_A Leucine carboxyl methyl 96.4 0.022 7.5E-07 67.6 13.7 65 639-706 453-530 (695)
89 3bn6_A Lactadherin; anticoagul 96.4 0.0056 1.9E-07 58.2 7.0 94 698-803 56-157 (158)
90 2v72_A CBM32, EXO-alpha-sialid 96.3 0.0093 3.2E-07 55.1 8.2 92 698-802 51-142 (143)
91 3lei_A Platelet aggregation fa 96.3 0.014 4.6E-07 55.2 9.3 94 694-804 49-146 (153)
92 1w8o_A Bacterial sialidase; 3D 96.3 0.019 6.6E-07 66.8 12.3 96 698-804 504-600 (601)
93 3hny_M Coagulation factor VIII 96.3 0.0074 2.5E-07 57.4 7.2 95 697-803 56-156 (159)
94 1czt_A Protein (coagulation fa 96.2 0.0066 2.2E-07 57.9 6.7 98 697-804 54-157 (160)
95 4deq_A Neuropilin-1, vascular 96.2 0.0087 3E-07 59.9 7.5 96 697-804 52-155 (218)
96 2j1v_A Fucolectin-related prot 96.1 0.024 8.1E-07 53.4 9.6 94 694-804 55-150 (151)
97 1k3i_A Galactose oxidase precu 96.1 0.0079 2.7E-07 70.9 7.8 67 637-704 253-329 (656)
98 2uvk_A YJHT; unknown function, 95.9 0.009 3.1E-07 64.3 6.7 70 638-707 20-104 (357)
99 2j22_A Fucolectin-related prot 95.5 0.035 1.2E-06 52.0 8.1 92 694-804 52-147 (148)
100 1k3i_A Galactose oxidase precu 95.5 0.04 1.4E-06 64.7 10.6 96 698-804 68-165 (656)
101 1vcb_B Protein (elongin C); tu 95.3 0.0073 2.5E-07 53.7 2.4 75 210-286 18-112 (112)
102 2w1s_A Hyaluronoglucosaminidas 95.0 0.14 4.7E-06 50.2 11.0 81 696-783 62-147 (192)
103 2qqi_A Neuropilin-1; VEGF rece 95.0 0.059 2E-06 57.3 8.9 96 697-804 53-156 (318)
104 2qqj_A Neuropilin-2; VEGF rece 94.8 0.094 3.2E-06 55.9 10.1 97 696-804 212-322 (325)
105 2qqj_A Neuropilin-2; VEGF rece 94.8 0.07 2.4E-06 56.9 8.9 96 697-804 54-157 (325)
106 2qqi_A Neuropilin-1; VEGF rece 94.6 0.077 2.6E-06 56.4 8.8 96 697-804 212-315 (318)
107 3cqo_A FBP32; F-lectin, fucole 94.6 0.038 1.3E-06 58.1 6.2 93 695-804 192-290 (293)
108 4ag4_A Epithelial discoidin do 94.5 0.066 2.3E-06 57.3 7.9 98 696-804 56-160 (351)
109 2vm9_A Discoidin-2, discoidin 94.3 0.083 2.9E-06 54.3 7.9 94 696-804 57-154 (257)
110 3drx_A BTB/POZ domain-containi 94.2 0.091 3.1E-06 51.3 7.5 86 211-299 14-112 (202)
111 3cqo_A FBP32; F-lectin, fucole 93.5 0.095 3.3E-06 55.0 6.7 95 694-804 45-146 (293)
112 1s1g_A Potassium voltage-gated 93.4 0.16 5.5E-06 45.8 7.1 83 210-295 14-106 (124)
113 3kvt_A Potassium channel prote 93.4 0.087 3E-06 46.9 5.1 85 349-440 6-92 (115)
114 2qqm_A Neuropilin-1; VEGF rece 93.1 0.23 7.7E-06 55.5 9.3 94 697-804 344-447 (450)
115 1s1g_A Potassium voltage-gated 93.0 0.1 3.5E-06 47.1 5.1 83 349-441 14-100 (124)
116 2yc2_A IFT25, intraflagellar t 92.7 1.1 3.9E-05 41.1 11.9 94 694-804 43-138 (139)
117 2qqo_A Neuropilin-2; VEGF rece 92.5 0.36 1.2E-05 54.0 9.9 97 696-804 341-451 (460)
118 3eyp_A Putative alpha-L-fucosi 92.4 0.39 1.3E-05 53.6 9.8 93 697-804 363-456 (469)
119 4gz9_A Neuropilin-1, A5 protei 92.2 0.21 7.3E-06 57.6 7.7 98 696-803 302-405 (577)
120 1t1d_A Protein (potassium chan 91.6 0.2 7E-06 43.3 5.0 85 350-441 3-90 (100)
121 2qqm_A Neuropilin-1; VEGF rece 91.6 0.44 1.5E-05 53.1 9.2 96 697-804 185-288 (450)
122 2nz0_B Potassium voltage-gated 91.5 0.27 9.4E-06 45.3 6.0 82 210-294 36-127 (140)
123 2nz0_B Potassium voltage-gated 91.2 0.15 5.1E-06 47.1 4.0 83 348-440 35-121 (140)
124 2r7e_B Coagulation factor VIII 91.2 0.21 7.2E-06 59.5 6.2 96 697-804 663-764 (770)
125 1nn7_A Potassium channel KV4.2 91.0 0.098 3.4E-06 45.8 2.4 81 350-440 2-86 (105)
126 2qqo_A Neuropilin-2; VEGF rece 90.9 0.6 2.1E-05 52.1 9.5 96 697-804 183-286 (460)
127 2qqk_A Neuropilin-2; VEGF rece 90.9 0.58 2E-05 54.0 9.6 97 696-804 460-570 (579)
128 4gz9_A Neuropilin-1, A5 protei 90.9 0.35 1.2E-05 55.8 7.6 50 696-747 461-513 (577)
129 1tvg_A LOC51668 protein; cell 90.8 3.3 0.00011 38.6 12.9 94 694-804 51-146 (153)
130 1nn7_A Potassium channel KV4.2 90.8 0.18 6.1E-06 44.1 3.9 82 211-295 2-93 (105)
131 2zxq_A Endo-alpha-N-acetylgala 90.7 0.046 1.6E-06 66.8 0.0 100 698-804 1270-1374(1376)
132 2qqk_A Neuropilin-2; VEGF rece 90.5 0.4 1.4E-05 55.3 7.7 96 697-804 302-405 (579)
133 3kvt_A Potassium channel prote 88.6 0.65 2.2E-05 41.2 5.8 77 211-290 7-93 (115)
134 1sdd_B Coagulation factor V; c 88.3 0.74 2.5E-05 53.8 7.8 94 699-804 383-484 (647)
135 2cho_A Glucosaminidase, hexosa 88.0 0.25 8.5E-06 58.1 3.5 89 697-804 626-714 (716)
136 2r7e_B Coagulation factor VIII 87.2 0.7 2.4E-05 55.0 6.7 95 696-804 503-607 (770)
137 1sdd_B Coagulation factor V; c 87.2 0.45 1.5E-05 55.7 5.0 98 697-804 541-644 (647)
138 1t1d_A Protein (potassium chan 87.0 0.99 3.4E-05 38.9 5.9 77 211-290 3-90 (100)
139 4b1m_A Levanase; hydrolase, CB 84.3 11 0.00039 36.0 12.8 98 42-158 82-184 (185)
140 3ues_A Alpha-1,3/4-fucosidase; 83.8 6.2 0.00021 43.9 11.9 88 697-802 388-476 (478)
141 2wn3_A Discoidin-1 subunit A; 83.0 2.2 7.6E-05 43.4 7.3 91 697-804 57-153 (254)
142 1oq1_A Protein YESU; structura 82.1 4.7 0.00016 39.4 8.7 92 64-160 113-220 (223)
143 4dxt_A SUN domain-containing p 79.3 31 0.0011 33.4 13.7 106 690-804 80-195 (198)
144 3gdb_A Endo-D, putative unchar 74.0 0.66 2.2E-05 55.1 0.0 79 697-785 841-927 (937)
145 4azz_A Levanase; hydrolase; 1. 75.6 0.7 2.4E-05 44.0 0.0 94 61-164 71-169 (172)
146 2r9r_B Paddle chimera voltage 46.9 23 0.00078 39.9 6.2 86 349-441 53-141 (514)
147 2eqx_A Kelch repeat and BTB do 46.1 24 0.00084 30.1 5.0 28 425-452 13-40 (105)
148 2r9r_B Paddle chimera voltage 44.7 37 0.0013 38.1 7.5 77 211-290 54-141 (514)
149 2lg7_A Uncharacterized protein 44.1 12 0.00041 30.8 2.4 45 50-102 5-60 (129)
150 2y9w_C Lectin-like fold protei 29.9 1.4E+02 0.0046 25.2 6.6 70 692-777 63-133 (150)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=3.1e-40 Score=351.86 Aligned_cols=253 Identities=17% Similarity=0.263 Sum_probs=229.8
Q ss_pred cCCCCcchHHHHHHhhhcCCCceeEEEEEc---CeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeC------CC
Q 040529 326 VFPFGLPINSQRLKQLASNCEYADVNIYVE---SHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLR------DV 396 (806)
Q Consensus 326 ~~~~~~~~~l~~l~~l~~~~~~sDV~l~v~---~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~------~v 396 (806)
..+.+...+++.|++++.++.+|||+|.++ |+ .|+|||.||+++|+||++||+++|.|+...+|.++ ++
T Consensus 11 ~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~--~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v 88 (279)
T 3i3n_A 11 ECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGR--EFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGP 88 (279)
T ss_dssp ECTTHHHHHHHHHHHHHHHTTTCCEEEECC----C--EEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCS
T ss_pred CCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCe--EEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCC
Confidence 345566778899999999999999999998 54 59999999999999999999999999999999998 89
Q ss_pred CHHHHHHHHhHHhcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCcHHHHHHHhhhcCCHHHHHH
Q 040529 397 SLKAFKIMLEFMYSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLECFSEDSVCPILQVVTPISSCKLIEET 476 (806)
Q Consensus 397 ~~~~f~~lL~fiYtg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~~l~~~n~~~~l~~~a~~~~~~~L~~~ 476 (806)
++++|+.+|+|+|||++.++. ++ +.+++.+|++|+++.|++.|+++|.+.++++| |..++.+|..|++..|.+.
T Consensus 89 ~~~~f~~ll~~~Ytg~~~i~~-~~----v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n-~~~i~~~A~~~~~~~L~~~ 162 (279)
T 3i3n_A 89 EPDTVEAVIEYMYTGRIRVST-GS----VHEVLELADRFLLIRLKEFCGEFLKKKLHLSN-CVAIHSLAHMYTLSQLALK 162 (279)
T ss_dssp CHHHHHHHHHHHHHSEEEEET-TT----HHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTT-HHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHhhCcCCcccCH-HH----HHHHHHHHHHHCcHHHHHHHHHHHHHcCCcch-HHHHHHHHHHcCcHHHHHH
Confidence 999999999999999999886 55 99999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHhchhhhhccccccccCCHHHHHhhccCCCCCCCCHHHHHHHHHHHHhccccccCcchhhHHHhhcCchhhHHHH
Q 040529 477 CERKFALHFDYCTTASLDFVFLDEATFSSIIRHPDLTVTSEERVLNAILMWGMKAKELCGWEEMDELIIKLTPELVFEER 556 (806)
Q Consensus 477 ~~~~I~~nf~~l~~~~~~F~~L~~~~l~~IL~sd~L~V~sE~~v~~avl~Wi~~~~~~~~w~~~~~~l~~~~p~~~~~~r 556 (806)
|.+||..||.++ ..+++|.+|+.+.+..||++++|+|.+|.+||+++++|+++++ +.|
T Consensus 163 ~~~~i~~~f~~v-~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~~---------------------~~r 220 (279)
T 3i3n_A 163 AADMIRRNFHKV-IQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNA---------------------EER 220 (279)
T ss_dssp HHHHHHHTHHHH-TTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTTH---------------------HHH
T ss_pred HHHHHHHHHHHH-hcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcCH---------------------HHH
Confidence 999999999999 8999999999999999999999999999999999999999985 678
Q ss_pred HHhHhhccccccccccChHHHhh-cccccccccchhHHHHHHHHHHHHhcCCC
Q 040529 557 LQSVNYLLPFVRFPLLPHALLKK-MENSCLNRQIPIFDNLVKEAIIFIESGLA 608 (806)
Q Consensus 557 ~~~l~~Ll~~IRf~lls~~~L~~-v~~~~l~~~~~~~~~~l~ea~~~~~~~~~ 608 (806)
.+++..||++||||+|++.+|.. +..++++...+.|++++.+|++||..+..
T Consensus 221 ~~~~~~ll~~VRf~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~~~~~e 273 (279)
T 3i3n_A 221 ERYFEELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE 273 (279)
T ss_dssp TTTHHHHHTTSCGGGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHhhccchhcCCHHHHHHHHHHHHhccCchh
Confidence 89999999999999999998864 88899999999999999999999988654
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=2.3e-39 Score=340.72 Aligned_cols=242 Identities=17% Similarity=0.284 Sum_probs=202.1
Q ss_pred cCCCCcchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCC--CCCcceEEeCCCCHHHHHH
Q 040529 326 VFPFGLPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMS--ESYSSDVHLRDVSLKAFKI 403 (806)
Q Consensus 326 ~~~~~~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~--Es~~~~I~l~~v~~~~f~~ 403 (806)
..+.+...++++|++++.++.+|||+|.++|+. |+|||.||+++|+||++||++++. |+...+|.++++++++|+.
T Consensus 10 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~--f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ 87 (256)
T 3hve_A 10 SDPQHAARLLRALSSFREESRFCDAHLVLDGEE--IPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMRE 87 (256)
T ss_dssp CCTTTHHHHHHHHHTCCC--CCCCEEEEETTEE--EEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhcCCCcceEEEECCEE--EechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHH
Confidence 345566778999999999999999999999865 999999999999999999999887 6778899999999999999
Q ss_pred HHhHHhcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCcHHHHHHHhhhcCCHHHHHHHHHHHHh
Q 040529 404 MLEFMYSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLECFSEDSVCPILQVVTPISSCKLIEETCERKFAL 483 (806)
Q Consensus 404 lL~fiYtg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~~l~~~n~~~~l~~~a~~~~~~~L~~~~~~~I~~ 483 (806)
+++|+|||++.++. ++ +.+++.+|++|+++.|++.|+++|.+.++++| |..++.+|..|++..|.+.|.+||..
T Consensus 88 ll~~~Yt~~~~i~~-~~----v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n-~~~i~~~A~~~~~~~L~~~~~~~i~~ 161 (256)
T 3hve_A 88 ILDYIFSGQIRLNE-DT----IQDVVQAADLLLLTDLKTLCCEFLEGCIAAEN-CIGIRDFALHYCLHHVHYLATEYLET 161 (256)
T ss_dssp HHHHHHHSCCCCC--CC----HHHHHHHHHHHTCHHHHHHHHHHHHHTCCSST-THHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhhccCCCCcccH-hH----HHHHHHHHHHHChHHHHHHHHHHHHhhCCHhh-HHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 99999999999886 55 99999999999999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhccccccccCCHHHHHhhccCCCCCCCCHHHHHHHHHHHHhccccccCcchhhHHHhhcCchhhHHHHHHhHhhc
Q 040529 484 HFDYCTTASLDFVFLDEATFSSIIRHPDLTVTSEERVLNAILMWGMKAKELCGWEEMDELIIKLTPELVFEERLQSVNYL 563 (806)
Q Consensus 484 nf~~l~~~~~~F~~L~~~~l~~IL~sd~L~V~sE~~v~~avl~Wi~~~~~~~~w~~~~~~l~~~~p~~~~~~r~~~l~~L 563 (806)
||.++ ..+++|.+|+.+.+..||++|+|+|.+|.+||+++++|+++++ ++|.+++..|
T Consensus 162 ~f~~v-~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~---------------------~~R~~~~~~l 219 (256)
T 3hve_A 162 HFRDV-SSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDT---------------------EIRKVHMKDV 219 (256)
T ss_dssp HHHHH-TTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC-----------------------CCSTTTHHHH
T ss_pred HHHHH-hCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcCH---------------------HHHHHHHHHH
Confidence 99999 8999999999999999999999999999999999999999974 5688899999
Q ss_pred cccccccccChHHHh-hcccccccccc-hhHHHHHH
Q 040529 564 LPFVRFPLLPHALLK-KMENSCLNRQI-PIFDNLVK 597 (806)
Q Consensus 564 l~~IRf~lls~~~L~-~v~~~~l~~~~-~~~~~~l~ 597 (806)
+++||||+|++.+|. .++.++++... +.|++++.
T Consensus 220 l~~VRf~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~ 255 (256)
T 3hve_A 220 MSALWVSGLDSSYLREQMLNEPLVREIVKECSNIPL 255 (256)
T ss_dssp HHHHHHHTTCC-CHHHHHHTSTTHHHHHCC------
T ss_pred HHhCCCCCCCHHHHHHHHhcChHHHhhHHHHHHHhh
Confidence 999999999999886 58899999988 78988774
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.92 E-value=6.9e-25 Score=215.88 Aligned_cols=152 Identities=24% Similarity=0.313 Sum_probs=139.1
Q ss_pred chHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCCCCHHHHHHHHhHHhcC
Q 040529 332 PINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIMLEFMYSG 411 (806)
Q Consensus 332 ~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~v~~~~f~~lL~fiYtg 411 (806)
..+.+++.+++.++.+|||+|.++++. |+|||.||+++|+||++||.+++.|+...+|.++++++++|+.+|+|||+|
T Consensus 19 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~--~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~ 96 (172)
T 3htm_A 19 CRLADELGGLWENSRFTDCCLCVAGQE--FQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTG 96 (172)
T ss_dssp CCHHHHHHHHHHHTCSCCEEEEETTEE--EEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCCcceEEEECCEE--EEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhCC
Confidence 345789999999999999999999875 999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCcHHHHHHHhhhcCCHHHHHHHHHHHHhchhhhhcc
Q 040529 412 ELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLECFSEDSVCPILQVVTPISSCKLIEETCERKFALHFDYCTTA 491 (806)
Q Consensus 412 ~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~~l~~~n~~~~l~~~a~~~~~~~L~~~~~~~I~~nf~~l~~~ 491 (806)
.+.++. ++ +.+++.+|++|+++.|++.|+++|.+.++.+| |..++.+|..|++..|.+.|.+||.+||.++ .+
T Consensus 97 ~~~~~~-~~----~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n-~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v-~~ 169 (172)
T 3htm_A 97 KAPNLD-KM----ADDLLAAADKYALERLKVMCEDALCSNLSVEN-AAEILILADLHSADQLKTQAVDFINYHATDV-LE 169 (172)
T ss_dssp CCTTGG-GT----HHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTT-HHHHHHHHHHTTCHHHHHHHHHHHHHTC------
T ss_pred CCCCcH-HH----HHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHH-HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH-Hc
Confidence 998775 54 99999999999999999999999999999999 9999999999999999999999999999998 44
Q ss_pred c
Q 040529 492 S 492 (806)
Q Consensus 492 ~ 492 (806)
+
T Consensus 170 s 170 (172)
T 3htm_A 170 T 170 (172)
T ss_dssp -
T ss_pred C
Confidence 4
No 4
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.89 E-value=8.7e-23 Score=220.69 Aligned_cols=152 Identities=24% Similarity=0.328 Sum_probs=132.7
Q ss_pred hHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCCCCHHHHHHHHhHHhcCc
Q 040529 333 INSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIMLEFMYSGE 412 (806)
Q Consensus 333 ~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~v~~~~f~~lL~fiYtg~ 412 (806)
.+.++|.+++.++.+|||+|.++|+. |+|||.|||++|+||++||.++|.|+...+|.|+++++++|+.+|+|||++.
T Consensus 160 ~l~~~l~~l~~~~~~~Dv~l~v~~~~--f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~ 237 (312)
T 3hqi_A 160 RLADELGGLWENSRFTDCCLCVAGQE--FQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGK 237 (312)
T ss_dssp CHHHHHHHHHHTTCSCCEEEEETTEE--EEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHhCCCCCceEEEECCEE--EeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCCC
Confidence 35688999999999999999999875 9999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCcHHHHHHHhhhcCCHHHHHHHHHHHHhchhhhhccc
Q 040529 413 LNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLECFSEDSVCPILQVVTPISSCKLIEETCERKFALHFDYCTTAS 492 (806)
Q Consensus 413 l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~~l~~~n~~~~l~~~a~~~~~~~L~~~~~~~I~~nf~~l~~~~ 492 (806)
+.+.. + .+.+|+.+|++|+++.|+..|+++|.+.++.+| |..++.+|..|++..|.+.|.+||..||.++ .++
T Consensus 238 ~~~~~-~----~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n-~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v-~~s 310 (312)
T 3hqi_A 238 APNLD-K----MADDLLAAADKYALERLKVMCEDALCSNLSVEN-AAEILILADLHSADQLKTQAVDFINYHATDV-LET 310 (312)
T ss_dssp CTTHH-H----HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTT-HHHHHHHHHHTTCHHHHHHHHHHHHHTC-------
T ss_pred CCChH-H----HHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH-hhC
Confidence 88764 3 399999999999999999999999999999999 9999999999999999999999999999998 554
Q ss_pred c
Q 040529 493 L 493 (806)
Q Consensus 493 ~ 493 (806)
+
T Consensus 311 ~ 311 (312)
T 3hqi_A 311 S 311 (312)
T ss_dssp -
T ss_pred C
Confidence 3
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.87 E-value=7.8e-23 Score=195.23 Aligned_cols=136 Identities=26% Similarity=0.357 Sum_probs=102.4
Q ss_pred chHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCCCCHHHHHHHHhHHhcC
Q 040529 332 PINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIMLEFMYSG 411 (806)
Q Consensus 332 ~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~v~~~~f~~lL~fiYtg 411 (806)
+.+.+++++++.++.+|||+|.++|+. |+|||.||+++|+||++||.+++.|+...+|.++++++++|+.+|+|+|+|
T Consensus 10 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~--~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~ 87 (145)
T 4eoz_A 10 CRLADELGGLWENSRFTDCCLCVAGQE--FQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTG 87 (145)
T ss_dssp CCHHHHHHHHHHHTCSCCEEEEETTEE--EEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCCcceEEEECCEE--EEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccC
Confidence 345799999999999999999999875 999999999999999999999999988899999999999999999999999
Q ss_pred ccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCcHHHHHHHhhhcCCHHHHH
Q 040529 412 ELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLECFSEDSVCPILQVVTPISSCKLIEE 475 (806)
Q Consensus 412 ~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~~l~~~n~~~~l~~~a~~~~~~~L~~ 475 (806)
.+.++. ++ +.+++.+|++|+++.|++.|+++|.+.++.+| |..++.+|..|++.+|++
T Consensus 88 ~~~~~~-~~----~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n-~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 88 KAPNLD-KM----ADDLLAAADKYALERLKVMCEDALCSNLSVEN-AAEILILADLHSADQLKT 145 (145)
T ss_dssp CCTTGG-GT----HHHHHHHHHHTTCHHHHHHHHCC----------------------------
T ss_pred ccCCcH-HH----HHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHH-HHHHHHHHHHhCHHHhcC
Confidence 998775 44 89999999999999999999999999999999 999999999999988863
No 6
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.85 E-value=4.9e-21 Score=176.64 Aligned_cols=116 Identities=22% Similarity=0.326 Sum_probs=103.3
Q ss_pred cCCCCcchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCCCCHHHHHHHH
Q 040529 326 VFPFGLPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIML 405 (806)
Q Consensus 326 ~~~~~~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~v~~~~f~~lL 405 (806)
..+.+...+++.+++++.++.+|||+|.++++. |+|||.||+++|+||++||.+++.|+....|.++++++++|+.+|
T Consensus 4 ~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~--~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll 81 (120)
T 2if5_A 4 PFPDHSSDILSGLNEQRTQGLLCDVVILVEGRE--FPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALM 81 (120)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEE--EEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHhcCCCCCeEEEECCEE--EeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHH
Confidence 345666778899999999999999999999865 999999999999999999999999999999999999999999999
Q ss_pred hHHhcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHH
Q 040529 406 EFMYSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLL 448 (806)
Q Consensus 406 ~fiYtg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L 448 (806)
+|+|||++.++. ++ +.+++.+|++|+++.|++.|+++|
T Consensus 82 ~~~Yt~~~~~~~-~~----~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 82 DFAYTATLTVST-AN----VGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp HHHHHSCCCCCG-GG----HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHcCCCCccCH-HH----HHHHHHHHHHhCCHHHHHHHHHHh
Confidence 999999999875 55 999999999999999999999987
No 7
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.84 E-value=7.4e-21 Score=179.98 Aligned_cols=123 Identities=17% Similarity=0.243 Sum_probs=112.5
Q ss_pred ccCCCCcchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeC-CCCHHHHHH
Q 040529 325 TVFPFGLPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLR-DVSLKAFKI 403 (806)
Q Consensus 325 ~~~~~~~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~-~v~~~~f~~ 403 (806)
+..+.+...+++.|++++.++.+|||+|.++|+. |+|||.||+++|+||++||.+++.|. ..|.++ ++++++|+.
T Consensus 14 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~--f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~~~v~~~~~~~ 89 (138)
T 2z8h_A 14 YESSVHSTNVLLSLNDQRKKDVLCDVTVLVEGQR--FRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLPEEVTVKGFEP 89 (138)
T ss_dssp CCCSSHHHHHHHHHHHHHHHTCSCCEEEEETTEE--EEECHHHHHHHCHHHHHHHTTCCCTT--EEEECCTTSCHHHHHH
T ss_pred ecCCchHHHHHHHHHHHHhhCCCcCeEEEECCEE--EechHHHHHHcCHHHHHHHhcCCCCC--ceEEeCCCCCHHHHHH
Confidence 3455667778899999999999999999999865 99999999999999999999988774 578895 899999999
Q ss_pred HHhHHhcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCC
Q 040529 404 MLEFMYSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLECFSEDS 456 (806)
Q Consensus 404 lL~fiYtg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~~l~~~n 456 (806)
+|+|||||++.++. +| +.+|+.+|++|+++.|++.|+++|.+.++.+|
T Consensus 90 lL~~~Ytg~~~i~~-~~----v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 90 LIQFAYTAKLILSK-DN----VDEVCRCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp HHHHHHHSCCCCCT-TT----HHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred HHHHhcCCCcccCH-HH----HHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 99999999999886 55 99999999999999999999999999999887
No 8
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.84 E-value=1.2e-20 Score=175.78 Aligned_cols=117 Identities=23% Similarity=0.354 Sum_probs=108.3
Q ss_pred cCCCCcchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEe-CCCCHHHHHHH
Q 040529 326 VFPFGLPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHL-RDVSLKAFKIM 404 (806)
Q Consensus 326 ~~~~~~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l-~~v~~~~f~~l 404 (806)
..+.+...+++.|++++.++.+|||+|.++++. |+|||.||+++|+||++||.+++.| ....|.| +++++++|+.+
T Consensus 8 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~--~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f~~l 84 (127)
T 1r29_A 8 QFTRHASDVLLNLNRLRSRDILTDVVIVVSREQ--FRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEINPEGFNIL 84 (127)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEE--EEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhcCCCCCEEEEECCEE--EehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHHHHH
Confidence 445566778899999999999999999999864 9999999999999999999999999 7789999 99999999999
Q ss_pred HhHHhcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhh
Q 040529 405 LEFMYSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLE 450 (806)
Q Consensus 405 L~fiYtg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~ 450 (806)
|+|||||.+.++. ++ +.+|+.+|++|+++.|++.|+++|.+
T Consensus 85 l~~~Ytg~~~~~~-~~----~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 85 LDFMYTSRLNLRE-GN----IMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp HHHHHHSCCCCCT-TT----HHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHcCCCcCcCH-HH----HHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 9999999999876 55 99999999999999999999999975
No 9
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.82 E-value=2.5e-20 Score=168.78 Aligned_cols=107 Identities=30% Similarity=0.464 Sum_probs=92.6
Q ss_pred hhhcCCCceeEEEEEcCe--eeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCCCCHHHHHHHHhHHhcCccccCC
Q 040529 340 QLASNCEYADVNIYVESH--GLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIMLEFMYSGELNIED 417 (806)
Q Consensus 340 ~l~~~~~~sDV~l~v~~~--~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~v~~~~f~~lL~fiYtg~l~i~~ 417 (806)
++++++.+|||+|.++++ +..|+|||.||+++|+||++||.+++.|+. .+|.++++++++|+.+|+|||||.+.++.
T Consensus 1 ~l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~ 79 (109)
T 2vkp_A 1 SMFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEA 79 (109)
T ss_dssp CCTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCT
T ss_pred CcccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCH
Confidence 367899999999999982 124999999999999999999999999998 99999999999999999999999999886
Q ss_pred CCchhHHHHHHHHHHHhhCchHHHHHHHHHHhhcC
Q 040529 418 SLDFGSLLLQLLILSDQFGVTLLHQECCKLLLECF 452 (806)
Q Consensus 418 ~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~~l 452 (806)
++ +.+++.+|++|+++.|++.|+++|.+.+
T Consensus 80 -~~----~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 80 -DT----VLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp -TT----HHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred -HH----HHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 55 9999999999999999999999998754
No 10
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.82 E-value=1.7e-20 Score=178.76 Aligned_cols=117 Identities=15% Similarity=0.294 Sum_probs=102.7
Q ss_pred cCCCCcchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCC--CCcceEEeCCCCHHHHHH
Q 040529 326 VFPFGLPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSE--SYSSDVHLRDVSLKAFKI 403 (806)
Q Consensus 326 ~~~~~~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~E--s~~~~I~l~~v~~~~f~~ 403 (806)
..+.+...+++.|++++.++.+|||+|.++|+. |+|||.||+++|+||++||.+++.+ +...+|.|+++++++|+.
T Consensus 26 ~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~--f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~ 103 (144)
T 2ppi_A 26 SDPQHAARLLRALSSFREESRFCDAHLVLDGEE--IPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMRE 103 (144)
T ss_dssp CCTTHHHHHHHHHHHTTC--CCCCEEEEETTEE--EEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHH
T ss_pred cCcchHHHHHHHHHHHHhcCCCcceEEEECCEE--EehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHH
Confidence 455666778899999999999999999999864 9999999999999999999998876 667899999999999999
Q ss_pred HHhHHhcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHh
Q 040529 404 MLEFMYSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLL 449 (806)
Q Consensus 404 lL~fiYtg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~ 449 (806)
+|+|||||++.++. ++ +.+|+.+|++|+++.|++.|+++|.
T Consensus 104 lL~fiYtg~~~i~~-~~----v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 104 ILDYIFSGQIRLNE-DT----IQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp HHHHHTTSCCCCCT-TT----HHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred HHHHHhCCCCCCCH-HH----HHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 99999999999876 55 9999999999999999999999863
No 11
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.82 E-value=8.6e-21 Score=174.72 Aligned_cols=111 Identities=20% Similarity=0.263 Sum_probs=100.5
Q ss_pred CCcchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCCCCHHHHHHHHhHH
Q 040529 329 FGLPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIMLEFM 408 (806)
Q Consensus 329 ~~~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~v~~~~f~~lL~fi 408 (806)
.+...+++.|++++.++.+|||+|.++|+. |+|||.||+++|+||++||.+++ ..+|.++++++++|+.+|+||
T Consensus 6 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~--f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~~i 79 (119)
T 3b84_A 6 QHSVRVLQELNKQREKGQYCDATLDVGGLV--FKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLDFF 79 (119)
T ss_dssp HHHHHHHHHHHHHHHHTCSCCEEEEETTEE--EEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCcceEEEECCEE--EEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHHHH
Confidence 344567899999999999999999999865 99999999999999999999876 568999999999999999999
Q ss_pred hcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhh
Q 040529 409 YSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLE 450 (806)
Q Consensus 409 Ytg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~ 450 (806)
|||++.++. +| +.+++.+|++|+++.|++.|+++|.+
T Consensus 80 Ytg~~~~~~-~~----v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 80 YTGHLALTS-GN----RDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp HHSCCCCCT-TT----HHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred cCCCCccCH-HH----HHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 999999886 55 99999999999999999999999875
No 12
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.82 E-value=1.6e-20 Score=176.94 Aligned_cols=117 Identities=19% Similarity=0.248 Sum_probs=99.2
Q ss_pred CCcchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCCCCHHHHHHHHhHH
Q 040529 329 FGLPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIMLEFM 408 (806)
Q Consensus 329 ~~~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~v~~~~f~~lL~fi 408 (806)
.+...+++.|+++++++.+|||+|.++++. |+|||.||+++|+||++||.+++ ..+|.|+++++++|+.+|+||
T Consensus 7 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~--f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~fi 80 (135)
T 2yy9_A 7 GHSVRVLQELNKQREKGQYCDATLDVGGLV--FKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDFF 80 (135)
T ss_dssp CHHHHHHHHHHHHHHTTTTCCEEEEETTEE--EEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCCcceEEEECCEE--EehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHHH
Confidence 445667899999999999999999999865 99999999999999999999876 568999999999999999999
Q ss_pred hcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCC
Q 040529 409 YSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLECFSEDS 456 (806)
Q Consensus 409 Ytg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~~l~~~n 456 (806)
|||++.++. ++ +.+|+.+|++|+++.|++.|+++|.+.+...+
T Consensus 81 Ytg~~~i~~-~~----v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~ 123 (135)
T 2yy9_A 81 YTGHLALTS-GN----RDQVLLAAKELRVPEAVELCQSFQPQTSVGQA 123 (135)
T ss_dssp HHSCCCCCT-TT----HHHHHHHHHHTTCHHHHHHHHHCCC-------
T ss_pred hCCCCCCCH-HH----HHHHHHHHHHhCcHHHHHHHHHHHHHhccCCC
Confidence 999999886 55 99999999999999999999999998776543
No 13
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.81 E-value=7e-20 Score=169.16 Aligned_cols=113 Identities=26% Similarity=0.334 Sum_probs=102.8
Q ss_pred CCCCcchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCCCCHHHHHHHHh
Q 040529 327 FPFGLPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIMLE 406 (806)
Q Consensus 327 ~~~~~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~v~~~~f~~lL~ 406 (806)
.+.+...+++.+++++.++.+|||+|.++|+. |+|||.||+++|+||++||.++ ..+|.++++++++|+.+|+
T Consensus 8 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~--f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~ 80 (121)
T 1buo_A 8 NPSHPTGLLCKANQMRLAGTLCDVVIMVDSQE--FHAHRTVLACTSKMFEILFHRN-----SQHYTLDFLSPKTFQQILE 80 (121)
T ss_dssp CTTHHHHHHHHHHHHHHHTTTCCEEEEESSCE--EEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHhcCCCCCEEEEECCEE--EehhHHHHhhcCHHHHHHHcCC-----CcEEEeCCCCHHHHHHHHH
Confidence 44556677899999999999999999999865 9999999999999999999863 5689999999999999999
Q ss_pred HHhcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhhc
Q 040529 407 FMYSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLEC 451 (806)
Q Consensus 407 fiYtg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~~ 451 (806)
|+|||++.++. ++ +.+++.+|++|+++.|++.|+++|.+.
T Consensus 81 ~~Ytg~~~~~~-~~----~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 81 YAYTATLQAKA-ED----LDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp HHHHSCCCCCG-GG----HHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hhcCCCcCCCH-HH----HHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 99999999876 55 999999999999999999999999864
No 14
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.81 E-value=1.4e-20 Score=173.83 Aligned_cols=111 Identities=16% Similarity=0.159 Sum_probs=102.9
Q ss_pred ccccchhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCCC--CCCceEEeCCCCHHHHHHHHHhhcc
Q 040529 187 MIDERTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLSL--TGEGIVQLQEVIYPILHALLQFIYT 264 (806)
Q Consensus 187 ~~~~~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~~--~~~~~i~l~~v~~~~f~~lL~fiYt 264 (806)
....+++.+++.|+++++++.+|||+|.|+ |++|+|||+||||||+||+.+ ++..+|.++++++++|+.+|+|+||
T Consensus 7 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~f~aHk~vLaa~S~yF~~~f~~~~~~i~l~~~~~~~f~~ll~~~Yt 84 (121)
T 1buo_A 7 QNPSHPTGLLCKANQMRLAGTLCDVVIMVD--SQEFHAHRTVLACTSKMFEILFHRNSQHYTLDFLSPKTFQQILEYAYT 84 (121)
T ss_dssp CCTTHHHHHHHHHHHHHHHTTTCCEEEEES--SCEEEECHHHHHHHCHHHHHHTTSCCSEEEECSSCHHHHHHHHHHHHH
T ss_pred cCcchHHHHHHHHHHHHhcCCCCCEEEEEC--CEEEehhHHHHhhcCHHHHHHHcCCCcEEEeCCCCHHHHHHHHHhhcC
Confidence 345678889999999999999999999996 789999999999999999653 4577999999999999999999999
Q ss_pred CcccCCCCCchhHHHhhhhccchhhHHHHHHHHHh
Q 040529 265 GRTQISEPLLGPLWALSSQFQVMPLVKQCEETMER 299 (806)
Q Consensus 265 g~~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~~ 299 (806)
|.+.++.+++.+++.+|++|+++.|++.|+++|.+
T Consensus 85 g~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 85 ATLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp SCCCCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999875
No 15
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.81 E-value=4.1e-20 Score=169.38 Aligned_cols=109 Identities=20% Similarity=0.354 Sum_probs=99.1
Q ss_pred cchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeC--CCCHHHHHHHHhHH
Q 040529 331 LPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLR--DVSLKAFKIMLEFM 408 (806)
Q Consensus 331 ~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~--~v~~~~f~~lL~fi 408 (806)
...+++.|++++.++.+|||+|.++|+. |+|||.||+++|+||++||.++ ....|.|+ ++++++|+.+|+||
T Consensus 6 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~--~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~ 79 (116)
T 2vpk_A 6 CEHLLERLNKQREAGFLCDCTIVIGEFQ--FKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFI 79 (116)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEE--EEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEECCEE--EeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHH
Confidence 4556899999999999999999999875 9999999999999999999986 35678888 99999999999999
Q ss_pred hcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhh
Q 040529 409 YSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLE 450 (806)
Q Consensus 409 Ytg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~ 450 (806)
|||++.++. ++ +.+++.+|++|+++.|++.|+++|.+
T Consensus 80 Yt~~~~~~~-~~----v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (116)
T 2vpk_A 80 YTGTLNLDS-WN----VKEIHQAADYLKVEEVVTKCKIKMED 116 (116)
T ss_dssp HHSCCCCCT-TT----HHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred cCCCcccCH-HH----HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999876 55 99999999999999999999999853
No 16
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.81 E-value=1.7e-20 Score=172.70 Aligned_cols=109 Identities=22% Similarity=0.234 Sum_probs=99.8
Q ss_pred ccchhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCCC---CCCceEEeCCCCHHHHHHHHHhhccC
Q 040529 189 DERTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLSL---TGEGIVQLQEVIYPILHALLQFIYTG 265 (806)
Q Consensus 189 ~~~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~~---~~~~~i~l~~v~~~~f~~lL~fiYtg 265 (806)
..|+..+++.|+++++++.+|||+|.|+ |++|+|||+||||||+||+.+ .....|.|+++++++|+.+|+|||||
T Consensus 5 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~f~aHk~vLaa~S~yF~~~f~~~~~~~i~l~~~~~~~f~~ll~~iYtg 82 (119)
T 3b84_A 5 VQHSVRVLQELNKQREKGQYCDATLDVG--GLVFKAHWSVLACCSHFFQSLYGDGSGGSVVLPAGFAEIFGLLLDFFYTG 82 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEET--TEEEEECHHHHHHHCHHHHHHHTTTTCCCEEECGGGHHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHHHHHhcCCCcceEEEEC--CEEEEeeHHHHhhcCHHHHHHHCCCCCCeEEeCCCCHHHHHHHHHHHcCC
Confidence 4577889999999999999999999996 799999999999999999543 33678999999999999999999999
Q ss_pred cccCCCCCchhHHHhhhhccchhhHHHHHHHHHh
Q 040529 266 RTQISEPLLGPLWALSSQFQVMPLVKQCEETMER 299 (806)
Q Consensus 266 ~~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~~ 299 (806)
.+.++.+++.+++.+|++|+++.|++.|+++|.+
T Consensus 83 ~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 83 HLALTSGNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred CCccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999875
No 17
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.81 E-value=2.9e-20 Score=171.42 Aligned_cols=109 Identities=17% Similarity=0.321 Sum_probs=100.2
Q ss_pred cccchhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCC-------CCCCceEEeCCCCHHHHHHHHH
Q 040529 188 IDERTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLS-------LTGEGIVQLQEVIYPILHALLQ 260 (806)
Q Consensus 188 ~~~~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~-------~~~~~~i~l~~v~~~~f~~lL~ 260 (806)
...|++.+++.|+++++++.+|||+|.|+ |++|+|||+|||+||+||+. ++....|.++++++++|+.+|+
T Consensus 5 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~ 82 (120)
T 2if5_A 5 FPDHSSDILSGLNEQRTQGLLCDVVILVE--GREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMD 82 (120)
T ss_dssp CTTHHHHHHHHHHHHHHTTCSCCEEEEET--TEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHhcCCCCCeEEEEC--CEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHH
Confidence 35678889999999999999999999996 79999999999999999943 4667899999999999999999
Q ss_pred hhccCcccCCCCCchhHHHhhhhccchhhHHHHHHHHH
Q 040529 261 FIYTGRTQISEPLLGPLWALSSQFQVMPLVKQCEETME 298 (806)
Q Consensus 261 fiYtg~~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~ 298 (806)
|||||.+.++.+++.+++.+|++|+++.|++.|+++|+
T Consensus 83 ~~Yt~~~~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 83 FAYTATLTVSTANVGDILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp HHHHSCCCCCGGGHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999973
No 18
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.80 E-value=5e-20 Score=171.69 Aligned_cols=113 Identities=20% Similarity=0.303 Sum_probs=103.2
Q ss_pred ccccccchhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCCC------CCCceEEe-CCCCHHHHHH
Q 040529 185 EMMIDERTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLSL------TGEGIVQL-QEVIYPILHA 257 (806)
Q Consensus 185 ~~~~~~~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~~------~~~~~i~l-~~v~~~~f~~ 257 (806)
.+....|+..+++.|+++++++.+|||+|.|+ |++|+|||+||||||+||+.+ .....|.| +++++++|+.
T Consensus 6 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~~~aHk~iLaa~S~~F~~~f~~~~~e~~~~i~l~~~~~~~~f~~ 83 (127)
T 1r29_A 6 QIQFTRHASDVLLNLNRLRSRDILTDVVIVVS--REQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNI 83 (127)
T ss_dssp CCCCTTHHHHHHHHHHHHHHTTCSCCEEEEET--TEEEEECHHHHHHHCHHHHHHHTSTTTTTCSEEECCTTSCHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHhcCCCCCEEEEEC--CEEEehHHHHHHHhCHHHHHHhcCCccCCCCEEEeCCCCCHHHHHH
Confidence 34456788889999999999999999999996 799999999999999999432 15789999 9999999999
Q ss_pred HHHhhccCcccCCCCCchhHHHhhhhccchhhHHHHHHHHHh
Q 040529 258 LLQFIYTGRTQISEPLLGPLWALSSQFQVMPLVKQCEETMER 299 (806)
Q Consensus 258 lL~fiYtg~~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~~ 299 (806)
+|+|||||.+.++.+++.+++.+|++|+++.|++.|+++|.+
T Consensus 84 ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 84 LLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp HHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999864
No 19
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.80 E-value=2.6e-20 Score=170.72 Aligned_cols=107 Identities=24% Similarity=0.277 Sum_probs=99.4
Q ss_pred cchhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCCC---CCCceEEeC--CCCHHHHHHHHHhhcc
Q 040529 190 ERTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLSL---TGEGIVQLQ--EVIYPILHALLQFIYT 264 (806)
Q Consensus 190 ~~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~~---~~~~~i~l~--~v~~~~f~~lL~fiYt 264 (806)
.|+..+++.|+++++++.+|||+|.|+ |++|+|||+||||||+||+.+ ..+..|.|+ ++++++|+.+|+||||
T Consensus 4 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~~~aHk~vLaa~S~yF~~~f~~~~~~~i~l~~~~~~~~~f~~ll~~~Yt 81 (116)
T 2vpk_A 4 HHCEHLLERLNKQREAGFLCDCTIVIG--EFQFKAHRNVLASFSEYFGAIYRSTSENNVFLDQSQVKADGFQKLLEFIYT 81 (116)
T ss_dssp HHHHHHHHHHHHHHHHTCSCCEEEEET--TEEEEECHHHHHHHCHHHHHHHTTCCCSCEECCTTTCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCcEEEEEC--CEEEeccHHHHhhcCHHHHHHHcCCCCCeEEeecCCCCHHHHHHHHHHHcC
Confidence 467889999999999999999999996 799999999999999999543 246788888 9999999999999999
Q ss_pred CcccCCCCCchhHHHhhhhccchhhHHHHHHHHH
Q 040529 265 GRTQISEPLLGPLWALSSQFQVMPLVKQCEETME 298 (806)
Q Consensus 265 g~~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~ 298 (806)
|.+.++.+++.+++.+|++|+++.|++.|+++|.
T Consensus 82 ~~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 82 GTLNLDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp SCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999985
No 20
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.80 E-value=7.2e-20 Score=173.15 Aligned_cols=113 Identities=19% Similarity=0.203 Sum_probs=102.5
Q ss_pred cccccccchhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCCC-----CCCceEEeC-CCCHHHHHH
Q 040529 184 VEMMIDERTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLSL-----TGEGIVQLQ-EVIYPILHA 257 (806)
Q Consensus 184 ~~~~~~~~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~~-----~~~~~i~l~-~v~~~~f~~ 257 (806)
..+....++..+++.|+++++++.+|||+|.|+ |++|+|||+||||||+||+.+ .....|.++ ++++++|+.
T Consensus 12 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~f~aHk~vLaa~S~yF~~~f~~~~~e~~~i~l~~~v~~~~~~~ 89 (138)
T 2z8h_A 12 FAYESSVHSTNVLLSLNDQRKKDVLCDVTVLVE--GQRFRAHRSVLAACSSYFHSRIVGQTDAELTVTLPEEVTVKGFEP 89 (138)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHTCSCCEEEEET--TEEEEECHHHHHHHCHHHHHHHTTCCCTTEEEECCTTSCHHHHHH
T ss_pred eEecCCchHHHHHHHHHHHHhhCCCcCeEEEEC--CEEEechHHHHHHcCHHHHHHHhcCCCCCceEEeCCCCCHHHHHH
Confidence 344456788899999999999999999999996 799999999999999999542 334689995 999999999
Q ss_pred HHHhhccCcccCCCCCchhHHHhhhhccchhhHHHHHHHHH
Q 040529 258 LLQFIYTGRTQISEPLLGPLWALSSQFQVMPLVKQCEETME 298 (806)
Q Consensus 258 lL~fiYtg~~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~ 298 (806)
+|+|||||.+.++.+++.+++.+|++|+++.|++.|+++|.
T Consensus 90 lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 130 (138)
T 2z8h_A 90 LIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIEESCFQFLK 130 (138)
T ss_dssp HHHHHHHSCCCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTT
T ss_pred HHHHhcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987
No 21
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.79 E-value=2.9e-20 Score=172.73 Aligned_cols=114 Identities=18% Similarity=0.252 Sum_probs=103.4
Q ss_pred cCCCCcchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCC-CCHHHHHHH
Q 040529 326 VFPFGLPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRD-VSLKAFKIM 404 (806)
Q Consensus 326 ~~~~~~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~-v~~~~f~~l 404 (806)
..+.+...+++.|++++.++.+|||+|.++++. |+|||.||+++|+||++||.+++.| ...|.+++ +++++|+.+
T Consensus 11 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~--f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~~~~f~~~ 86 (125)
T 3ohu_A 11 ESTVHCTNILLGLNDQRKKDILCDVTLIVERKE--FRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVTARGFGPL 86 (125)
T ss_dssp ECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEE--EEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCCHHHHHHH
T ss_pred ecHHHHHHHHHHHHHHHhcCCccceEEEECCEE--EechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCCHHHHHHH
Confidence 345566778899999999999999999999865 9999999999999999999998877 67899998 999999999
Q ss_pred HhHHhcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHH
Q 040529 405 LEFMYSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLL 448 (806)
Q Consensus 405 L~fiYtg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L 448 (806)
|+|||||++.++. ++ +.+++.+|++|+++.|++.|++||
T Consensus 87 l~~iYtg~~~~~~-~~----v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 87 LQFAYTAKLLLSR-EN----IREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHHTTSEEEECT-TT----HHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HHhHcCCceEECH-HH----HHHHHHHHHHhCCHHHHHHHHHhC
Confidence 9999999999886 55 999999999999999999998764
No 22
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.79 E-value=3.4e-20 Score=174.63 Aligned_cols=109 Identities=20% Similarity=0.220 Sum_probs=99.0
Q ss_pred ccchhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCCC---CCCceEEeCCCCHHHHHHHHHhhccC
Q 040529 189 DERTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLSL---TGEGIVQLQEVIYPILHALLQFIYTG 265 (806)
Q Consensus 189 ~~~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~~---~~~~~i~l~~v~~~~f~~lL~fiYtg 265 (806)
..|...+++.|+++++++.+|||+|.|+ |++|+|||+||||||+||+.+ ....+|.|+++++++|+.+|+|||||
T Consensus 6 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~f~aHk~vLaa~S~yF~~mf~~~~~~~i~l~~~~~~~f~~lL~fiYtg 83 (135)
T 2yy9_A 6 SGHSVRVLQELNKQREKGQYCDATLDVG--GLVFKAHWSVLACCSHFFQRIYGDGTGGSVVLPAGFAEIFGLLLDFFYTG 83 (135)
T ss_dssp -CHHHHHHHHHHHHHHTTTTCCEEEEET--TEEEEECHHHHHHHCHHHHHTCC----CCEEECGGGHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHHHhcCCCcceEEEEC--CEEEehHHHHHHHhCHHHHHHHcCCCCCeEEeCCCCHHHHHHHHHHHhCC
Confidence 4577889999999999999999999996 799999999999999999654 22578999999999999999999999
Q ss_pred cccCCCCCchhHHHhhhhccchhhHHHHHHHHHh
Q 040529 266 RTQISEPLLGPLWALSSQFQVMPLVKQCEETMER 299 (806)
Q Consensus 266 ~~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~~ 299 (806)
++.++.+++.+|+.+|++|+++.|++.|+++|.+
T Consensus 84 ~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~ 117 (135)
T 2yy9_A 84 HLALTSGNRDQVLLAAKELRVPEAVELCQSFQPQ 117 (135)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-
T ss_pred CCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999864
No 23
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.79 E-value=4.7e-20 Score=169.79 Aligned_cols=110 Identities=21% Similarity=0.267 Sum_probs=99.5
Q ss_pred CCCcchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCCCCHHHHHHHHhH
Q 040529 328 PFGLPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIMLEF 407 (806)
Q Consensus 328 ~~~~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~v~~~~f~~lL~f 407 (806)
+.+...+++.|++++.++.+|||+|.++++. |+|||.||+++|+||++||.+ ...+|.++++++++|+.+|+|
T Consensus 8 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~--~~aHk~vLaa~S~yF~~~f~~-----~~~~i~l~~~~~~~f~~ll~~ 80 (119)
T 2q81_A 8 PQHSQHVLEQLNQQRQLGLLCDCTFVVDGVH--FKAHKAVLAACSEYFKMLFVD-----QKDVVHLDISNAAGLGQVLEF 80 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEETTEE--EEECHHHHHHHCHHHHHHHHH-----CCSGGGGGGCCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCcceEEEECCEE--EehhHHHHHHcCHHHHHHHcC-----CCCEEEeCCCCHHHHHHHHHH
Confidence 4455667899999999999999999999865 999999999999999999986 245678889999999999999
Q ss_pred HhcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHh
Q 040529 408 MYSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLL 449 (806)
Q Consensus 408 iYtg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~ 449 (806)
||||++.++. +| +.+++.+|++|+++.|++.|+++|.
T Consensus 81 ~Ytg~~~i~~-~~----~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 81 MYTAKLSLSP-EN----VDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHSCCCCCT-TT----HHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HcCCCCccCH-HH----HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999886 55 9999999999999999999999985
No 24
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.79 E-value=1.6e-20 Score=172.94 Aligned_cols=108 Identities=20% Similarity=0.251 Sum_probs=100.1
Q ss_pred ccchhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCCC--CCCceEEeCCCCHHHHHHHHHhhccCc
Q 040529 189 DERTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLSL--TGEGIVQLQEVIYPILHALLQFIYTGR 266 (806)
Q Consensus 189 ~~~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~~--~~~~~i~l~~v~~~~f~~lL~fiYtg~ 266 (806)
..|...+++.|+++++++.+|||+|.|+ |++|+|||+||||||+||+.+ +....|.++++++++|+.+|+|||||.
T Consensus 8 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~~~aHk~vLaa~S~yF~~~f~~~~~~i~l~~~~~~~f~~ll~~~Ytg~ 85 (119)
T 2q81_A 8 PQHSQHVLEQLNQQRQLGLLCDCTFVVD--GVHFKAHKAVLAACSEYFKMLFVDQKDVVHLDISNAAGLGQVLEFMYTAK 85 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEET--TEEEEECHHHHHHHCHHHHHHHHHCCSGGGGGGCCHHHHHHHHHHHHHSC
T ss_pred chHHHHHHHHHHHHHhcCCCcceEEEEC--CEEEehhHHHHHHcCHHHHHHHcCCCCEEEeCCCCHHHHHHHHHHHcCCC
Confidence 4677889999999999999999999996 799999999999999999654 345678889999999999999999999
Q ss_pred ccCCCCCchhHHHhhhhccchhhHHHHHHHHH
Q 040529 267 TQISEPLLGPLWALSSQFQVMPLVKQCEETME 298 (806)
Q Consensus 267 ~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~ 298 (806)
+.++.+++.+++.+|++|+++.|++.|++|+.
T Consensus 86 ~~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 86 LSLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999985
No 25
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.79 E-value=8.9e-20 Score=167.60 Aligned_cols=102 Identities=18% Similarity=0.161 Sum_probs=92.2
Q ss_pred hhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCCCCCCceEEeCCCCHHHHHHHHHhhccCcccCCC
Q 040529 192 TGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLSLTGEGIVQLQEVIYPILHALLQFIYTGRTQISE 271 (806)
Q Consensus 192 ~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~~~~~~~i~l~~v~~~~f~~lL~fiYtg~~~i~~ 271 (806)
...+++.|+ +.++.+|||+|.|+ |++|+|||+||||+|+||+. ....|+|+++++++|+.+|+|||||++.++.
T Consensus 16 ~~~~l~~l~--r~~~~~~Dv~l~v~--~~~f~aHk~vLaa~S~yF~~--~~~~i~l~~v~~~~f~~ll~fiYtg~~~i~~ 89 (119)
T 3m5b_A 16 SDRLVQLAA--RLRPALCDTLITVG--SQEFPAHSLVLAGVSQQLGR--RGQWALGEGISPSTFAQLLNFVYGESVELQP 89 (119)
T ss_dssp TCHHHHHHH--HHTTTTCCEEEEET--TEEEEECHHHHHTTCGGGCC--CEEEECCSSCCHHHHHHHHHHHTTCCEEECG
T ss_pred hHHHHHHHH--HhcCCCcceEEEEC--CEEEeeEHHHHHHcCHHHhc--CCCEEEeCCCCHHHHHHHHHHHcCCCcCcCH
Confidence 355667775 67899999999996 79999999999999999986 4568999999999999999999999999999
Q ss_pred CCchhHHHhhhhccchhhHHHHHHHHHh
Q 040529 272 PLLGPLWALSSQFQVMPLVKQCEETMER 299 (806)
Q Consensus 272 ~~~~~ll~~A~~~~l~~L~~~C~~~l~~ 299 (806)
+++.+++.+|++|+++.|++.|+++++.
T Consensus 90 ~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 90 GELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp GGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999763
No 26
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.79 E-value=5e-20 Score=170.90 Aligned_cols=114 Identities=18% Similarity=0.289 Sum_probs=100.2
Q ss_pred CCCCcchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeC-CCCHHHHHHHH
Q 040529 327 FPFGLPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLR-DVSLKAFKIML 405 (806)
Q Consensus 327 ~~~~~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~-~v~~~~f~~lL 405 (806)
.+.+...+++.|++++.++.+|||+|.++|+. |+|||.||+++|+||++||.+++.|+ ..|.++ ++++++|+.+|
T Consensus 9 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~--~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~~~v~~~~f~~lL 84 (124)
T 2ihc_A 9 SSVHSTNVLLSLNDQRKKDVLCDVTIFVEGQR--FRAHRSVLAACSSYFHSRIVGQADGE--LNITLPEEVTVKGFEPLI 84 (124)
T ss_dssp CSSHHHHHHHHHHHHHHHTCSCCEEEEETTEE--EEECHHHHHHHBHHHHHHHTTC---C--EEEECCTTSCHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHhcCCCcCEEEEECCEE--EecHHHHHHHcCHHHHHHHcCCCCCC--ceEeecCCcCHHHHHHHH
Confidence 34455677899999999999999999999865 99999999999999999999988774 578884 89999999999
Q ss_pred hHHhcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHh
Q 040529 406 EFMYSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLL 449 (806)
Q Consensus 406 ~fiYtg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~ 449 (806)
+|||||++.++. +| +.+++.+|++|+++.|++.|+++|.
T Consensus 85 ~~iYtg~~~i~~-~~----v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 85 QFAYTAKLILSK-EN----VDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHHSEEEEET-TT----HHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HHhcCCCcccCH-HH----HHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 999999999886 55 9999999999999999999998874
No 27
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.79 E-value=8.4e-20 Score=170.62 Aligned_cols=115 Identities=23% Similarity=0.310 Sum_probs=98.0
Q ss_pred cCCCCcchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeC-CCCHHHHHHH
Q 040529 326 VFPFGLPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLR-DVSLKAFKIM 404 (806)
Q Consensus 326 ~~~~~~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~-~v~~~~f~~l 404 (806)
..+.+...+++.|++++.++.+|||+|.++|+. |+|||.||+++|+||++||.++ ...+|.|+ ++++++|+.+
T Consensus 12 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~--~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~~~~f~~l 85 (129)
T 3ga1_A 12 EIPNFGNSILECLNEQRLQGLYCDVSVVVKGHA--FKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQPQSFQQI 85 (129)
T ss_dssp ECTTHHHHHHHHHHHHHHTTCSCCEEEEETTEE--EEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCCHHHHHHH
T ss_pred ecCcHHHHHHHHHHHHHhcCCCcceEEEECCEE--EEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCCHHHHHHH
Confidence 455566778899999999999999999999864 9999999999999999999976 56789996 8999999999
Q ss_pred HhHHhcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhhc
Q 040529 405 LEFMYSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLEC 451 (806)
Q Consensus 405 L~fiYtg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~~ 451 (806)
|+|||||++.++. ++ +.+++.+|++|+++.|++.|+++|.+.
T Consensus 86 l~~iYtg~~~i~~-~~----~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 86 LSFCYTGRLSMNV-GD----QDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp HHHHHHSEEECCT-TT----HHHHHHHHHHTTBTTSSCC--------
T ss_pred HHHHhCCccccCH-HH----HHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9999999999986 55 999999999999999999999999864
No 28
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.78 E-value=1.1e-19 Score=172.94 Aligned_cols=111 Identities=16% Similarity=0.287 Sum_probs=98.5
Q ss_pred cccccchhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCC---------CCCCceEEeCCCCHHHHH
Q 040529 186 MMIDERTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLS---------LTGEGIVQLQEVIYPILH 256 (806)
Q Consensus 186 ~~~~~~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~---------~~~~~~i~l~~v~~~~f~ 256 (806)
+....++..+++.|+++++++.+|||+|.|+ |+.|+|||+||||||+||+. ++....|.|+++++++|+
T Consensus 25 ~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~ 102 (144)
T 2ppi_A 25 VSDPQHAARLLRALSSFREESRFCDAHLVLD--GEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMR 102 (144)
T ss_dssp CCCTTHHHHHHHHHHHTTC--CCCCEEEEET--TEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHH
T ss_pred ecCcchHHHHHHHHHHHHhcCCCcceEEEEC--CEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHH
Confidence 3356677889999999999999999999996 79999999999999999942 246778999999999999
Q ss_pred HHHHhhccCcccCCCCCchhHHHhhhhccchhhHHHHHHHHH
Q 040529 257 ALLQFIYTGRTQISEPLLGPLWALSSQFQVMPLVKQCEETME 298 (806)
Q Consensus 257 ~lL~fiYtg~~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~ 298 (806)
.+|+|||||.+.++.+++.+++.+|++|+++.|++.|++||+
T Consensus 103 ~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 103 EILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp HHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999873
No 29
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.78 E-value=7.2e-20 Score=171.08 Aligned_cols=110 Identities=20% Similarity=0.194 Sum_probs=96.2
Q ss_pred cccchhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCCC---CCCceEEeC-CCCHHHHHHHHHhhc
Q 040529 188 IDERTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLSL---TGEGIVQLQ-EVIYPILHALLQFIY 263 (806)
Q Consensus 188 ~~~~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~~---~~~~~i~l~-~v~~~~f~~lL~fiY 263 (806)
...+...+++.|+++++++.+|||+|.|+ |+.|+|||+|||+||+||+.+ ....+|.|+ ++++++|+.+|+|||
T Consensus 13 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~~~~Hk~vLaa~S~~F~~~f~~~~~~~i~l~~~~~~~~f~~ll~~iY 90 (129)
T 3ga1_A 13 IPNFGNSILECLNEQRLQGLYCDVSVVVK--GHAFKAHRAVLAASSSYFRDLFNNSRSAVVELPAAVQPQSFQQILSFCY 90 (129)
T ss_dssp CTTHHHHHHHHHHHHHHTTCSCCEEEEET--TEEEEECHHHHHHHBHHHHHHHHHCCCSEEECCTTCCHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHhcCCCcceEEEEC--CEEEEehHHHHHHcCHHHHHHHcCCCCCEEEECCCCCHHHHHHHHHHHh
Confidence 45677889999999999999999999996 799999999999999999553 367899997 999999999999999
Q ss_pred cCcccCCCCCchhHHHhhhhccchhhHHHHHHHHHh
Q 040529 264 TGRTQISEPLLGPLWALSSQFQVMPLVKQCEETMER 299 (806)
Q Consensus 264 tg~~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~~ 299 (806)
||.+.++.+++.+++.+|++|+++.|++.|++||.+
T Consensus 91 tg~~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 91 TGRLSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp HSEEECCTTTHHHHHHHHHHTTBTTSSCC-------
T ss_pred CCccccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999975
No 30
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.77 E-value=8.7e-20 Score=169.53 Aligned_cols=110 Identities=22% Similarity=0.233 Sum_probs=100.0
Q ss_pred cccccchhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCCC-----CCCceEEeCC-CCHHHHHHHH
Q 040529 186 MMIDERTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLSL-----TGEGIVQLQE-VIYPILHALL 259 (806)
Q Consensus 186 ~~~~~~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~~-----~~~~~i~l~~-v~~~~f~~lL 259 (806)
+....|...+++.|+++++++.+|||+|.|+ |+.|+|||+||||+|+||+.+ .....|.+++ +++++|+.+|
T Consensus 10 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~f~aHk~vLaa~S~yF~~~f~~~~~e~~~i~l~~~~~~~~f~~~l 87 (125)
T 3ohu_A 10 YESTVHCTNILLGLNDQRKKDILCDVTLIVE--RKEFRAHRAVLAACSEYFWQALVGQTKNDLVVSLPEEVTARGFGPLL 87 (125)
T ss_dssp EECSSHHHHHHHHHHHHHHHTCSCCEEEEET--TEEEEECHHHHHHHBHHHHHHHTTCCCSSCEEECCTTCCHHHHHHHH
T ss_pred eecHHHHHHHHHHHHHHHhcCCccceEEEEC--CEEEechHHHHHHcCHHHHHHhcCCCCCCcEEEeCCCCCHHHHHHHH
Confidence 3356778889999999999999999999996 799999999999999999542 3367899998 9999999999
Q ss_pred HhhccCcccCCCCCchhHHHhhhhccchhhHHHHHHHH
Q 040529 260 QFIYTGRTQISEPLLGPLWALSSQFQVMPLVKQCEETM 297 (806)
Q Consensus 260 ~fiYtg~~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l 297 (806)
+|||||++.++.+++.+++.+|++|+++.|++.|++||
T Consensus 88 ~~iYtg~~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 88 QFAYTAKLLLSRENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHTTSEEEECTTTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HhHcCCceEECHHHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999998874
No 31
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.77 E-value=1.2e-19 Score=168.33 Aligned_cols=110 Identities=20% Similarity=0.218 Sum_probs=98.8
Q ss_pred ccccchhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCCC-----CCCceEEeC-CCCHHHHHHHHH
Q 040529 187 MIDERTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLSL-----TGEGIVQLQ-EVIYPILHALLQ 260 (806)
Q Consensus 187 ~~~~~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~~-----~~~~~i~l~-~v~~~~f~~lL~ 260 (806)
....++..+++.|+++++++.+|||+|.|+ |++|+|||+||||||+||+.+ .....|.++ ++++++|+.+|+
T Consensus 8 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~i~l~~~v~~~~f~~lL~ 85 (124)
T 2ihc_A 8 ESSVHSTNVLLSLNDQRKKDVLCDVTIFVE--GQRFRAHRSVLAACSSYFHSRIVGQADGELNITLPEEVTVKGFEPLIQ 85 (124)
T ss_dssp ECSSHHHHHHHHHHHHHHHTCSCCEEEEET--TEEEEECHHHHHHHBHHHHHHHTTC---CEEEECCTTSCHHHHHHHHH
T ss_pred cCcchHHHHHHHHHHHHhcCCCcCEEEEEC--CEEEecHHHHHHHcCHHHHHHHcCCCCCCceEeecCCcCHHHHHHHHH
Confidence 345678889999999999999999999996 799999999999999999542 234678995 999999999999
Q ss_pred hhccCcccCCCCCchhHHHhhhhccchhhHHHHHHHHH
Q 040529 261 FIYTGRTQISEPLLGPLWALSSQFQVMPLVKQCEETME 298 (806)
Q Consensus 261 fiYtg~~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~ 298 (806)
|||||.+.++.+++.+++.+|++|+++.|++.|++||+
T Consensus 86 ~iYtg~~~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 86 FAYTAKLILSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHSEEEEETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HhcCCCcccCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999874
No 32
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.75 E-value=3.1e-18 Score=168.12 Aligned_cols=107 Identities=21% Similarity=0.294 Sum_probs=98.9
Q ss_pred chhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccC-------CCCCCceEEeCCCCHHHHHHHHHhhc
Q 040529 191 RTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPL-------SLTGEGIVQLQEVIYPILHALLQFIY 263 (806)
Q Consensus 191 ~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~-------~~~~~~~i~l~~v~~~~f~~lL~fiY 263 (806)
+++.+.++|+++++++.+|||+|.|+ |++|+|||.|||++|+||+ .+.....|.|+++++++|+.+|+|||
T Consensus 17 p~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Y 94 (172)
T 3htm_A 17 PECRLADELGGLWENSRFTDCCLCVA--GQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIY 94 (172)
T ss_dssp CCCCHHHHHHHHHHHTCSCCEEEEET--TEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCcceEEEEC--CEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHh
Confidence 44568899999999999999999996 7899999999999999994 34566899999999999999999999
Q ss_pred cCcccCCCCCchhHHHhhhhccchhhHHHHHHHHHh
Q 040529 264 TGRTQISEPLLGPLWALSSQFQVMPLVKQCEETMER 299 (806)
Q Consensus 264 tg~~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~~ 299 (806)
||.+.++.+++.+++.+|++|+++.|++.|+++|.+
T Consensus 95 t~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~ 130 (172)
T 3htm_A 95 TGKAPNLDKMADDLLAAADKYALERLKVMCEDALCS 130 (172)
T ss_dssp HSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999864
No 33
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.74 E-value=1.5e-17 Score=176.51 Aligned_cols=114 Identities=18% Similarity=0.323 Sum_probs=99.7
Q ss_pred cccccchhhHHHHHHHHHhCCCCccEEEEec-CCCeEEEeeeeeecccCcccCC-------CCCCceEEeC------CCC
Q 040529 186 MMIDERTGYEKWGLENFFESWELSDMFFIVG-TEEKLVPAHKVILQASGNFPLS-------LTGEGIVQLQ------EVI 251 (806)
Q Consensus 186 ~~~~~~~~~~~~~l~~l~~~~~~sDv~~~v~-~~~~~~~aHk~ILaarS~~F~~-------~~~~~~i~l~------~v~ 251 (806)
+....|+..+++.|++++.++.+|||+|.|| ++|++|+|||+||||+|+||+. ++.+.+|+|+ +++
T Consensus 10 ~~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~ 89 (279)
T 3i3n_A 10 FECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPE 89 (279)
T ss_dssp EECTTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSC
T ss_pred cCCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCC
Confidence 4456788999999999999999999999996 2378999999999999999954 3556789998 899
Q ss_pred HHHHHHHHHhhccCcccCCCCCchhHHHhhhhccchhhHHHHHHHHHh
Q 040529 252 YPILHALLQFIYTGRTQISEPLLGPLWALSSQFQVMPLVKQCEETMER 299 (806)
Q Consensus 252 ~~~f~~lL~fiYtg~~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~~ 299 (806)
+++|+.+|+|+|||.+.++.+++.+++.+|++|+++.|++.|+++|.+
T Consensus 90 ~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~ 137 (279)
T 3i3n_A 90 PDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKK 137 (279)
T ss_dssp HHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999874
No 34
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.74 E-value=1.5e-18 Score=157.07 Aligned_cols=97 Identities=21% Similarity=0.383 Sum_probs=87.8
Q ss_pred HHhCCCCccEEEEecCC--CeEEEeeeeeecccCcccCC-------CCCCceEEeCCCCHHHHHHHHHhhccCcccCCCC
Q 040529 202 FFESWELSDMFFIVGTE--EKLVPAHKVILQASGNFPLS-------LTGEGIVQLQEVIYPILHALLQFIYTGRTQISEP 272 (806)
Q Consensus 202 l~~~~~~sDv~~~v~~~--~~~~~aHk~ILaarS~~F~~-------~~~~~~i~l~~v~~~~f~~lL~fiYtg~~~i~~~ 272 (806)
+++++.+|||+|.|+++ ++.|+|||.|||+||+||+. ++. ..|.++++++++|+.+|+|||||.+.++.+
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~ 80 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEAD 80 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCTT
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCHH
Confidence 67899999999999741 28999999999999999943 344 889999999999999999999999999999
Q ss_pred CchhHHHhhhhccchhhHHHHHHHHHh
Q 040529 273 LLGPLWALSSQFQVMPLVKQCEETMER 299 (806)
Q Consensus 273 ~~~~ll~~A~~~~l~~L~~~C~~~l~~ 299 (806)
++.+++.+|++|+++.|++.|+++|.+
T Consensus 81 ~~~~ll~~A~~~~~~~L~~~c~~~l~~ 107 (109)
T 2vkp_A 81 TVLATLYAAKKYIVPALAKACVNFLET 107 (109)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 999999999999999999999999864
No 35
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.73 E-value=5.2e-18 Score=155.80 Aligned_cols=105 Identities=20% Similarity=0.247 Sum_probs=91.0
Q ss_pred CCCcchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCCCCHHHHHHHHhH
Q 040529 328 PFGLPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIMLEF 407 (806)
Q Consensus 328 ~~~~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~v~~~~f~~lL~f 407 (806)
|.+...+++.|+ +.++.+|||+|.++|+. |+|||.|||++|+||++ ....|.++++++++|+.+|+|
T Consensus 13 ~~~~~~~l~~l~--r~~~~~~Dv~l~v~~~~--f~aHk~vLaa~S~yF~~---------~~~~i~l~~v~~~~f~~ll~f 79 (119)
T 3m5b_A 13 PYGSDRLVQLAA--RLRPALCDTLITVGSQE--FPAHSLVLAGVSQQLGR---------RGQWALGEGISPSTFAQLLNF 79 (119)
T ss_dssp TTTTCHHHHHHH--HHTTTTCCEEEEETTEE--EEECHHHHHTTCGGGCC---------CEEEECCSSCCHHHHHHHHHH
T ss_pred CcchHHHHHHHH--HhcCCCcceEEEECCEE--EeeEHHHHHHcCHHHhc---------CCCEEEeCCCCHHHHHHHHHH
Confidence 334455667775 67899999999999875 99999999999999984 356899999999999999999
Q ss_pred HhcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhh
Q 040529 408 MYSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLE 450 (806)
Q Consensus 408 iYtg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~ 450 (806)
||||++.++. +| +.+++.+|++|+++.|++.|++++.+
T Consensus 80 iYtg~~~i~~-~~----v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 80 VYGESVELQP-GE----LRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HTTCCEEECG-GG----HHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HcCCCcCcCH-HH----HHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 9999999976 55 99999999999999999999998765
No 36
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.73 E-value=7.6e-18 Score=154.14 Aligned_cols=105 Identities=22% Similarity=0.262 Sum_probs=93.9
Q ss_pred cCCCCcchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCCCCHHHHHHHH
Q 040529 326 VFPFGLPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIML 405 (806)
Q Consensus 326 ~~~~~~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~v~~~~f~~lL 405 (806)
..+.+...+++.+++++.++.+|||+|.++|+. |+|||.||+++|+||++||.++ ..+|.++++++++|+.+|
T Consensus 10 ~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~--f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~~~~f~~~l 82 (116)
T 3fkc_A 10 TDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRK--FRAHKNILSASSTYFHQLFSVA-----GQVVELSFIRAEIFAEIL 82 (116)
T ss_dssp CCTTHHHHHHHHHHHHHHHTTTCCEEEEETTEE--EEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHHhcCCceeEEEEECCEE--EehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHH
Confidence 345566778899999999999999999999864 9999999999999999999875 568999999999999999
Q ss_pred hHHhcCcc-ccCCCCchhHHHHHHHHHHHhhCchHHHH
Q 040529 406 EFMYSGEL-NIEDSLDFGSLLLQLLILSDQFGVTLLHQ 442 (806)
Q Consensus 406 ~fiYtg~l-~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~ 442 (806)
+|+|||++ .++. ++ +.+++.+|++|+++.|++
T Consensus 83 ~~~Ytg~~~~~~~-~~----~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 83 NYIYSSKIVRVRS-DL----LDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHTTSCCCSCCH-HH----HHHHHHHHHHHTCHHHHT
T ss_pred HhhcCCCcCCCCH-HH----HHHHHHHHHHhCccccCc
Confidence 99999999 5654 44 999999999999999874
No 37
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.73 E-value=1.5e-18 Score=158.77 Aligned_cols=102 Identities=23% Similarity=0.248 Sum_probs=93.7
Q ss_pred cccchhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCCC--CCCceEEeCCCCHHHHHHHHHhhccC
Q 040529 188 IDERTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLSL--TGEGIVQLQEVIYPILHALLQFIYTG 265 (806)
Q Consensus 188 ~~~~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~~--~~~~~i~l~~v~~~~f~~lL~fiYtg 265 (806)
...+...+++.|+++++++.+|||+|.|+ |+.|+|||+||||||+||+.+ ....+|.++++++++|+.+|+|+|||
T Consensus 11 ~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~--~~~f~aHk~vLaa~S~~F~~~f~~~~~~i~l~~~~~~~f~~~l~~~Ytg 88 (116)
T 3fkc_A 11 DIQYSGSLLNSLNEQRGHGLFCDVTVIVE--DRKFRAHKNILSASSTYFHQLFSVAGQVVELSFIRAEIFAEILNYIYSS 88 (116)
T ss_dssp CTTHHHHHHHHHHHHHHHTTTCCEEEEET--TEEEEECHHHHHHHCHHHHHHTTSCCSEEEECSSCHHHHHHHHHHHTTS
T ss_pred CccHHHHHHHHHHHHHhcCCceeEEEEEC--CEEEehhHHHHHHcCHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhhcCC
Confidence 45677889999999999999999999996 799999999999999999653 44779999999999999999999999
Q ss_pred cc-cCCCCCchhHHHhhhhccchhhHH
Q 040529 266 RT-QISEPLLGPLWALSSQFQVMPLVK 291 (806)
Q Consensus 266 ~~-~i~~~~~~~ll~~A~~~~l~~L~~ 291 (806)
.+ .++.+++.+++.+|++|+++.|++
T Consensus 89 ~~~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 89 KIVRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp CCCSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred CcCCCCHHHHHHHHHHHHHhCccccCc
Confidence 99 699999999999999999999874
No 38
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.72 E-value=1.4e-18 Score=165.58 Aligned_cols=113 Identities=19% Similarity=0.298 Sum_probs=96.3
Q ss_pred chhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCC-------CCCCceEEeCCCCHHHHHHHHHhhc
Q 040529 191 RTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLS-------LTGEGIVQLQEVIYPILHALLQFIY 263 (806)
Q Consensus 191 ~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~-------~~~~~~i~l~~v~~~~f~~lL~fiY 263 (806)
+++.+.++|+++++++.+|||+|.|+ |+.|+|||.||+++|+||+. ++....|.++++++++|+.+|+|+|
T Consensus 8 p~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y 85 (145)
T 4eoz_A 8 PECRLADELGGLWENSRFTDCCLCVA--GQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIY 85 (145)
T ss_dssp CCCCHHHHHHHHHHHTCSCCEEEEET--TEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHhCCCCcceEEEEC--CEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhc
Confidence 34568899999999999999999996 78999999999999999954 2345789999999999999999999
Q ss_pred cCcccCCCCCchhHHHhhhhccchhhHHHHHHHHH-hhhcccc
Q 040529 264 TGRTQISEPLLGPLWALSSQFQVMPLVKQCEETME-RFKLNKK 305 (806)
Q Consensus 264 tg~~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~-~~~l~~~ 305 (806)
||.+.++.+++.+++.+|++|+++.|++.|++++. .++.+|.
T Consensus 86 ~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~ 128 (145)
T 4eoz_A 86 TGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENA 128 (145)
T ss_dssp HSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHCC----------
T ss_pred cCccCCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999987 4554444
No 39
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.70 E-value=9.2e-18 Score=175.90 Aligned_cols=117 Identities=15% Similarity=0.257 Sum_probs=100.3
Q ss_pred ccccchhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCC---------CCCCceEEeCCCCHHHHHH
Q 040529 187 MIDERTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLS---------LTGEGIVQLQEVIYPILHA 257 (806)
Q Consensus 187 ~~~~~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~---------~~~~~~i~l~~v~~~~f~~ 257 (806)
....|+..+++.|+++++++.+|||+|.|| |++|+|||+||||+|+||+. +....+|.++++++++|+.
T Consensus 10 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ 87 (256)
T 3hve_A 10 SDPQHAARLLRALSSFREESRFCDAHLVLD--GEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMRE 87 (256)
T ss_dssp CCTTTHHHHHHHHHTCCC--CCCCEEEEET--TEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhcCCCcceEEEEC--CEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHH
Confidence 356788889999999999999999999996 79999999999999999943 2456789999999999999
Q ss_pred HHHhhccCcccCCCCCchhHHHhhhhccchhhHHHHHHHHH-hhhcccc
Q 040529 258 LLQFIYTGRTQISEPLLGPLWALSSQFQVMPLVKQCEETME-RFKLNKK 305 (806)
Q Consensus 258 lL~fiYtg~~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~-~~~l~~~ 305 (806)
+|+|+|||.+.++.+++.+++.+|++|+++.|++.|+++|. .++.+|+
T Consensus 88 ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~ 136 (256)
T 3hve_A 88 ILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENC 136 (256)
T ss_dssp HHHHHHHSCCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTT
T ss_pred HHhhccCCCCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhH
Confidence 99999999999999999999999999999999999999997 4444443
No 40
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.69 E-value=4e-17 Score=176.15 Aligned_cols=107 Identities=21% Similarity=0.297 Sum_probs=97.6
Q ss_pred chhhHHHHHHHHHhCCCCccEEEEecCCCeEEEeeeeeecccCcccCC-------CCCCceEEeCCCCHHHHHHHHHhhc
Q 040529 191 RTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLS-------LTGEGIVQLQEVIYPILHALLQFIY 263 (806)
Q Consensus 191 ~~~~~~~~l~~l~~~~~~sDv~~~v~~~~~~~~aHk~ILaarS~~F~~-------~~~~~~i~l~~v~~~~f~~lL~fiY 263 (806)
+++.+.++|.++++++.+|||+|.|+ |++|+|||+|||||||||+. +....+|.|+++++++|+.+|+|||
T Consensus 157 p~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iY 234 (312)
T 3hqi_A 157 PECRLADELGGLWENSRFTDCCLCVA--GQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIY 234 (312)
T ss_dssp CCCCHHHHHHHHHHTTCSCCEEEEET--TEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHhCCCCCceEEEEC--CEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhc
Confidence 34568899999999999999999996 79999999999999999943 4567899999999999999999999
Q ss_pred cCcccCCCCCchhHHHhhhhccchhhHHHHHHHHHh
Q 040529 264 TGRTQISEPLLGPLWALSSQFQVMPLVKQCEETMER 299 (806)
Q Consensus 264 tg~~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~~ 299 (806)
||.+++..+++.+|+.+|++|+++.|+..|+++|.+
T Consensus 235 t~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~ 270 (312)
T 3hqi_A 235 TGKAPNLDKMADDLLAAADKYALERLKVMCEDALCS 270 (312)
T ss_dssp HSCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CCCCCChHHHHHHHHHHHHHhCHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999863
No 41
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=2.6e-15 Score=134.38 Aligned_cols=96 Identities=17% Similarity=0.115 Sum_probs=90.3
Q ss_pred HhhcCCCCCcHHHHHHHhhhcCCHHHHHHHHHHHHhchhhhhccccccccCCHHHHHhhccCCCCCCCCHHHHHHHHHHH
Q 040529 448 LLECFSEDSVCPILQVVTPISSCKLIEETCERKFALHFDYCTTASLDFVFLDEATFSSIIRHPDLTVTSEERVLNAILMW 527 (806)
Q Consensus 448 L~~~l~~~n~~~~l~~~a~~~~~~~L~~~~~~~I~~nf~~l~~~~~~F~~L~~~~l~~IL~sd~L~V~sE~~v~~avl~W 527 (806)
+.+.++++| |+.++.+|+.|++.+|.+.|.+||..||.++ .++++|.+||.+.|..||++| |.+|++||+++++|
T Consensus 4 ~~~~L~~~N-Cl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v-~~~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av~~W 78 (105)
T 2eqx_A 4 GSSGVQVGN-CLQVMWLADRHSDPELYTAAKHCAKTHLAQL-QNTEEFLHLPHRLLTDIISDG---VPCSQNPTEAIEAW 78 (105)
T ss_dssp CCCCCCTTT-HHHHHHHHHHTTCHHHHHHHHHHHHHTCHHH-HTSHHHHHSCHHHHHHHHHTC---EETTSCHHHHHHHH
T ss_pred hhccCCHHH-HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH-HhcccHhhCCHHHHHHHHcCC---CCCHHHHHHHHHHH
Confidence 346789999 9999999999999999999999999999999 899999999999999999997 78999999999999
Q ss_pred HhccccccCcchhhHHHhhcCchhhHHHHHHhHhhccccccc
Q 040529 528 GMKAKELCGWEEMDELIIKLTPELVFEERLQSVNYLLPFVRF 569 (806)
Q Consensus 528 i~~~~~~~~w~~~~~~l~~~~p~~~~~~r~~~l~~Ll~~IRf 569 (806)
+++++ +.|.++++.||++||+
T Consensus 79 v~~d~---------------------~~R~~~~~~Ll~~VR~ 99 (105)
T 2eqx_A 79 INFNK---------------------EEREAFAESLRTSLKE 99 (105)
T ss_dssp HHTTH---------------------HHHHHHHHHHHHHCCE
T ss_pred HHcCH---------------------HHHHHHHHHHHHHHHH
Confidence 99985 7899999999999995
No 42
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.25 E-value=2.3e-11 Score=117.17 Aligned_cols=105 Identities=16% Similarity=0.291 Sum_probs=85.4
Q ss_pred EEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcC-CCC-CCCcceEEeCCCCHHHHHHHHhHHhcCc---------------
Q 040529 350 VNIYVESHGLVAQSHKIILSLWSVPFAKMFTN-GMS-ESYSSDVHLRDVSLKAFKIMLEFMYSGE--------------- 412 (806)
Q Consensus 350 V~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~-~~~-Es~~~~I~l~~v~~~~f~~lL~fiYtg~--------------- 412 (806)
|+|...++. .|.+||.+ |+.|+||++||.+ ++. |+....|.|++++..+++.+++|+|+..
T Consensus 3 v~L~ssDg~-~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~ 80 (159)
T 2ast_A 3 IKLQSSDGE-IFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 80 (159)
T ss_dssp EEEECTTSC-EEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------
T ss_pred EEEEcCCCC-EEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccc
Confidence 677765443 59999999 8899999999998 777 7777899999999999999999999987
Q ss_pred -----------cccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCcHHHHH
Q 040529 413 -----------LNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLECFSEDSVCPILQ 462 (806)
Q Consensus 413 -----------l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~~l~~~n~~~~l~ 462 (806)
+.++. +++.+|+.||++|++..|.++|++++...+...+ +..+.
T Consensus 81 ~~~i~~wD~~F~~id~-----~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt-~eeir 135 (159)
T 2ast_A 81 TDDIPVWDQEFLKVDQ-----GTLFELILAANYLDIKGLLDVTCKTVANMIKGKT-PEEIR 135 (159)
T ss_dssp CCCCCHHHHHHTCSCH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCC-HHHHH
T ss_pred hhhhhHHHHHHHcCCH-----HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-HHHHH
Confidence 44332 3599999999999999999999999999888877 55544
No 43
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=98.94 E-value=2.7e-09 Score=93.64 Aligned_cols=81 Identities=15% Similarity=0.209 Sum_probs=62.3
Q ss_pred EEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcC--CCCCCCcceEEeCCCCHHHHHHHHhHHh-----c---Cccc---cC
Q 040529 350 VNIYVESHGLVAQSHKIILSLWSVPFAKMFTN--GMSESYSSDVHLRDVSLKAFKIMLEFMY-----S---GELN---IE 416 (806)
Q Consensus 350 V~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~--~~~Es~~~~I~l~~v~~~~f~~lL~fiY-----t---g~l~---i~ 416 (806)
|+|+..|+. +|.|||.+ |+.|+||++||.+ ++.|+....|.|+++++.+++.+++|+| + +.+. ++
T Consensus 4 v~L~SsDg~-~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~ 81 (97)
T 4ajy_C 4 VKLISSDGH-EFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 81 (97)
T ss_dssp EEEECTTCC-EEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCC
T ss_pred EEEEecCCc-EEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCC
Confidence 566665553 59999999 9999999999987 6788888999999999999999999999 5 4554 54
Q ss_pred CCCchhHHHHHHHHHHHhhCc
Q 040529 417 DSLDFGSLLLQLLILSDQFGV 437 (806)
Q Consensus 417 ~~~n~~~~v~~Ll~~A~~l~l 437 (806)
. ++ +.+|+.||++|+.
T Consensus 82 ~-~~----l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 82 P-EI----ALELLMAANFLDC 97 (97)
T ss_dssp G-GG----HHHHHHHHHHHTC
T ss_pred H-HH----HHHHHHHHhhhCC
Confidence 3 33 9999999999973
No 44
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.75 E-value=1.9e-08 Score=94.56 Aligned_cols=101 Identities=14% Similarity=0.223 Sum_probs=83.3
Q ss_pred EEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCCCCHHHHHHHHhHHhcCc-----------------
Q 040529 350 VNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIMLEFMYSGE----------------- 412 (806)
Q Consensus 350 V~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~v~~~~f~~lL~fiYtg~----------------- 412 (806)
|+|...|+. .|.+|+.+ |..|.+|++||.+.- ...|.|++++..+++.+++|+|...
T Consensus 4 v~L~SsDg~-~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 77 (141)
T 1fs1_B 4 IKLQSSDGE-IFEVDVEI-AKQSVTIKTMLEDLG----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTD 77 (141)
T ss_dssp EEEECTTSC-EEEEEGGG-GGTCHHHHHHHHHTC----CSSEECTTCCHHHHHHHHHHHHHHTTCC--------------
T ss_pred EEEEeCCCC-EEEecHHH-HHHhHHHHHHHHhcC----CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchh
Confidence 677775553 59999998 789999999998621 4589999999999999999999755
Q ss_pred ---------cccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCcHHHHH
Q 040529 413 ---------LNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLECFSEDSVCPILQ 462 (806)
Q Consensus 413 ---------l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~~l~~~n~~~~l~ 462 (806)
+.++ .+.+.+|+.||++|++..|.++|++++...+...+ ...+.
T Consensus 78 ~i~~wD~~F~~vd-----~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt-~eeiR 130 (141)
T 1fs1_B 78 DIPVWDQEFLKVD-----QGTLFELILAANYLDIKGLLDVTCKTVANMIKGKT-PEEIR 130 (141)
T ss_dssp ---HHHHHHTCSC-----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCC-HHHHH
T ss_pred hhhHHHHHHHhCC-----HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCC-HHHHH
Confidence 2222 24599999999999999999999999999988877 55544
No 45
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=98.72 E-value=7.5e-09 Score=99.53 Aligned_cols=87 Identities=13% Similarity=0.122 Sum_probs=74.4
Q ss_pred EEEEecCCCeEEEeeeeeecccCcccCCC---------CCCceEEeCCCCHHHHHHHHHhhccCc---------------
Q 040529 211 MFFIVGTEEKLVPAHKVILQASGNFPLSL---------TGEGIVQLQEVIYPILHALLQFIYTGR--------------- 266 (806)
Q Consensus 211 v~~~v~~~~~~~~aHk~ILaarS~~F~~~---------~~~~~i~l~~v~~~~f~~lL~fiYtg~--------------- 266 (806)
|+|+..| |+.|++||.+ |++|++|+.+ .....|.|++|++.++..+++|+|++.
T Consensus 3 v~L~ssD-g~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~ 80 (159)
T 2ast_A 3 IKLQSSD-GEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 80 (159)
T ss_dssp EEEECTT-SCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------
T ss_pred EEEEcCC-CCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccc
Confidence 6777664 9999999999 9999998432 223689999999999999999999988
Q ss_pred -----------ccCCCCCchhHHHhhhhccchhhHHHHHHHHHh
Q 040529 267 -----------TQISEPLLGPLWALSSQFQVMPLVKQCEETMER 299 (806)
Q Consensus 267 -----------~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~~ 299 (806)
+.++.+++.+|+.||++|++..|.+.|++++..
T Consensus 81 ~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~ 124 (159)
T 2ast_A 81 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 124 (159)
T ss_dssp CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 667788899999999999999999999999864
No 46
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.59 E-value=2.2e-08 Score=96.27 Aligned_cols=102 Identities=14% Similarity=0.233 Sum_probs=57.3
Q ss_pred EEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCCCCHHHHHHHHhHHhcCcc----------------
Q 040529 350 VNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIMLEFMYSGEL---------------- 413 (806)
Q Consensus 350 V~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~v~~~~f~~lL~fiYtg~l---------------- 413 (806)
|+|...|+. .|.+|+.+ |..|++|++||.+.. ....|.|++++..+++.+++|+|+..-
T Consensus 6 v~L~SsDg~-~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 80 (160)
T 2p1m_A 6 IVLKSSDGE-SFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSD 80 (160)
T ss_dssp --CCC----------CHH-HHTCTTTC---------------CCTTSCHHHHHHHHHC----------------------
T ss_pred EEEEcCCCC-EEEECHHH-HHHhHHHHHHHHccC---CCCceeCCcCcHHHHHHHHHHHHHcccCCCccccccccccccc
Confidence 556654433 59999998 789999999998643 235799999999999999999998752
Q ss_pred -----------ccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCcHHHHH
Q 040529 414 -----------NIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLECFSEDSVCPILQ 462 (806)
Q Consensus 414 -----------~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~~l~~~n~~~~l~ 462 (806)
.++. +.+.+|+.||++|++..|.++|++++...+...+ ...+.
T Consensus 81 ~~i~~wD~~Fl~vd~-----~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt-~eeir 134 (160)
T 2p1m_A 81 DDLKAWDADFMKIDQ-----ATLFELILAANYLNIKNLLDLTCQTVADMIKGKT-PEEIR 134 (160)
T ss_dssp -------------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCC-HHHHH
T ss_pred chhhHHHHHHHcCCH-----HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-HHHHH
Confidence 2222 3499999999999999999999999999997766 44433
No 47
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=98.46 E-value=1.2e-07 Score=82.99 Aligned_cols=74 Identities=9% Similarity=0.066 Sum_probs=61.9
Q ss_pred cEEEEecCCCeEEEeeeeeecccCcccCCC---------CCCceEEeCCCCHHHHHHHHHhhc-----c---Cccc---C
Q 040529 210 DMFFIVGTEEKLVPAHKVILQASGNFPLSL---------TGEGIVQLQEVIYPILHALLQFIY-----T---GRTQ---I 269 (806)
Q Consensus 210 Dv~~~v~~~~~~~~aHk~ILaarS~~F~~~---------~~~~~i~l~~v~~~~f~~lL~fiY-----t---g~~~---i 269 (806)
-|+|+..| |++|++||.+ |++|++|+.+ +....|.|++|++.+++.+++|+| + +.++ +
T Consensus 3 ~v~L~SsD-g~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 3 YVKLISSD-GHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEEECTT-CCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEEecC-CcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 36777764 8999999999 9999999432 236789999999999999999999 5 6676 8
Q ss_pred CCCCchhHHHhhhhcc
Q 040529 270 SEPLLGPLWALSSQFQ 285 (806)
Q Consensus 270 ~~~~~~~ll~~A~~~~ 285 (806)
+.+++.+|+.||++|+
T Consensus 81 ~~~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 81 APEIALELLMAANFLD 96 (97)
T ss_dssp CGGGHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhhhC
Confidence 8999999999999886
No 48
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.35 E-value=2.2e-07 Score=87.30 Aligned_cols=87 Identities=14% Similarity=0.129 Sum_probs=75.1
Q ss_pred EEEEecCCCeEEEeeeeeecccCcccCCC---CCCceEEeCCCCHHHHHHHHHhhccCc---------------------
Q 040529 211 MFFIVGTEEKLVPAHKVILQASGNFPLSL---TGEGIVQLQEVIYPILHALLQFIYTGR--------------------- 266 (806)
Q Consensus 211 v~~~v~~~~~~~~aHk~ILaarS~~F~~~---~~~~~i~l~~v~~~~f~~lL~fiYtg~--------------------- 266 (806)
|+|+..| |+.|.+||.+ |.+|++++.+ .+...|.|++|+..+++.+++|+|+..
T Consensus 4 v~L~SsD-g~~f~v~~~v-A~~S~~ik~ml~~~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~ 81 (141)
T 1fs1_B 4 IKLQSSD-GEIFEVDVEI-AKQSVTIKTMLEDLGMDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPV 81 (141)
T ss_dssp EEEECTT-SCEEEEEGGG-GGTCHHHHHHHHHTCCSSEECTTCCHHHHHHHHHHHHHHTTCC-----------------H
T ss_pred EEEEeCC-CCEEEecHHH-HHHhHHHHHHHHhcCCCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhhhH
Confidence 6777764 9999999998 8899998553 125689999999999999999999866
Q ss_pred -----ccCCCCCchhHHHhhhhccchhhHHHHHHHHHh
Q 040529 267 -----TQISEPLLGPLWALSSQFQVMPLVKQCEETMER 299 (806)
Q Consensus 267 -----~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~~ 299 (806)
+.+..+++.+|+.||+++++..|.+.|++++..
T Consensus 82 wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~ 119 (141)
T 1fs1_B 82 WDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 119 (141)
T ss_dssp HHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 456677889999999999999999999999864
No 49
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.31 E-value=1.6e-07 Score=90.22 Aligned_cols=87 Identities=11% Similarity=0.129 Sum_probs=49.6
Q ss_pred EEEEecCCCeEEEeeeeeecccCcccCCC----CCCceEEeCCCCHHHHHHHHHhhccCc--------------------
Q 040529 211 MFFIVGTEEKLVPAHKVILQASGNFPLSL----TGEGIVQLQEVIYPILHALLQFIYTGR-------------------- 266 (806)
Q Consensus 211 v~~~v~~~~~~~~aHk~ILaarS~~F~~~----~~~~~i~l~~v~~~~f~~lL~fiYtg~-------------------- 266 (806)
|+|+.. +|+.|.+|+.+ |..|++|+.+ .....|.|++|+..+++.+++|+|+..
T Consensus 6 v~L~Ss-Dg~~f~v~~~v-A~~S~~ik~ml~~~~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i 83 (160)
T 2p1m_A 6 IVLKSS-DGESFEVEEAV-ALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDL 83 (160)
T ss_dssp --CCC----------CHH-HHTCTTTC------------CCTTSCHHHHHHHHHC-------------------------
T ss_pred EEEEcC-CCCEEEECHHH-HHHhHHHHHHHHccCCCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccchh
Confidence 666665 48999999998 8899999764 234579999999999999999999876
Q ss_pred -------ccCCCCCchhHHHhhhhccchhhHHHHHHHHHh
Q 040529 267 -------TQISEPLLGPLWALSSQFQVMPLVKQCEETMER 299 (806)
Q Consensus 267 -------~~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~~ 299 (806)
+.+..+++.+|+.||++|++..|.+.|++++..
T Consensus 84 ~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~ 123 (160)
T 2p1m_A 84 KAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVAD 123 (160)
T ss_dssp -----------------CHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 356788899999999999999999999999864
No 50
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.13 E-value=1.1e-05 Score=70.67 Aligned_cols=86 Identities=12% Similarity=0.146 Sum_probs=66.5
Q ss_pred eEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCCCCHHHHHHHHhHHhcCc---------cccCCCC
Q 040529 349 DVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIMLEFMYSGE---------LNIEDSL 419 (806)
Q Consensus 349 DV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~v~~~~f~~lL~fiYtg~---------l~i~~~~ 419 (806)
-|+|...|+. +|.+++.+ |..|.+++.|+..++ |.....|.|++++..+++.+++|+|.-. ..+...+
T Consensus 5 ~v~L~SsDg~-~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~ 81 (99)
T 1hv2_A 5 FVTLVSKDDK-EYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFE 81 (99)
T ss_dssp EEEEEETTTE-EEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCC
T ss_pred EEEEEecCCC-EEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCcc
Confidence 3677775554 59999997 789999999999876 6666789999999999999999998643 1222211
Q ss_pred chhHHHHHHHHHHHhhCc
Q 040529 420 DFGSLLLQLLILSDQFGV 437 (806)
Q Consensus 420 n~~~~v~~Ll~~A~~l~l 437 (806)
--.+.+++|+.||++|++
T Consensus 82 vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 82 IPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHhCc
Confidence 112569999999999975
No 51
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=97.98 E-value=3.1e-05 Score=74.69 Aligned_cols=106 Identities=11% Similarity=0.117 Sum_probs=78.5
Q ss_pred eEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCC----CCCcceEEeCCCCHHHHHHHHhHHhcCcccc---------
Q 040529 349 DVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMS----ESYSSDVHLRDVSLKAFKIMLEFMYSGELNI--------- 415 (806)
Q Consensus 349 DV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~----Es~~~~I~l~~v~~~~f~~lL~fiYtg~l~i--------- 415 (806)
-|+|...|+. .|.+++.+ |..|..++.|+...-. +.....|.|++++..+++.|++|++.-.-.-
T Consensus 8 ~i~L~SsDG~-~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~ 85 (169)
T 3v7d_A 8 NVVLVSGEGE-RFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDS 85 (169)
T ss_dssp EEEEECTTCC-EEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC------
T ss_pred eEEEEeCCCC-EEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCcccccccc
Confidence 5677776654 69999998 6789999999985322 2334689999999999999999997643210
Q ss_pred ------CCC-----CchhHHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCC
Q 040529 416 ------EDS-----LDFGSLLLQLLILSDQFGVTLLHQECCKLLLECFSEDS 456 (806)
Q Consensus 416 ------~~~-----~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~~l~~~n 456 (806)
... .--.+.+++|+.||++|++..|.++|++.+...+...+
T Consensus 86 ~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgkt 137 (169)
T 3v7d_A 86 RKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRS 137 (169)
T ss_dssp --CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCC
T ss_pred cccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCC
Confidence 000 00124699999999999999999999999988776655
No 52
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=97.97 E-value=1.8e-05 Score=68.85 Aligned_cols=81 Identities=15% Similarity=0.240 Sum_probs=59.9
Q ss_pred EEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcC-C-CCCCCcceEEeCCCCHHHHHHHHhHHhcCc-----------cccC
Q 040529 350 VNIYVESHGLVAQSHKIILSLWSVPFAKMFTN-G-MSESYSSDVHLRDVSLKAFKIMLEFMYSGE-----------LNIE 416 (806)
Q Consensus 350 V~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~-~-~~Es~~~~I~l~~v~~~~f~~lL~fiYtg~-----------l~i~ 416 (806)
|+|...|+. +|.+++.+ |..|.+++.|+.. + +.|+....|.|++++..+++.+++|+|... ..+.
T Consensus 3 v~L~SsDg~-~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd 80 (96)
T 2fnj_C 3 VKLISSDGH-EFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 80 (96)
T ss_dssp EEEECTTSC-EEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCC
T ss_pred EEEEecCCC-EEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccC
Confidence 566665543 59999997 7899999999985 3 356666799999999999999999997643 1222
Q ss_pred CCCchhHHHHHHHHHHHhhCc
Q 040529 417 DSLDFGSLLLQLLILSDQFGV 437 (806)
Q Consensus 417 ~~~n~~~~v~~Ll~~A~~l~l 437 (806)
. +.+.+|+.||++|++
T Consensus 81 ~-----~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 81 P-----EIALELLMAANFLDC 96 (96)
T ss_dssp T-----TTHHHHHHHHHHHTC
T ss_pred H-----HHHHHHHHHHHHhCc
Confidence 2 349999999999975
No 53
>2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside hydrolase, GH84C, hydrolase; HET: GAL; 1.49A {Clostridium perfringens} PDB: 2j1e_A* 2j7m_A*
Probab=97.93 E-value=7.3e-05 Score=70.27 Aligned_cols=98 Identities=10% Similarity=0.127 Sum_probs=64.8
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecCCcccceEEEEEEecCCCCeEeeEEeecCcccccCCccceeeecCCCCCcCeEE
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDGSRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPFRF 776 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~r~ 776 (806)
..+.|+.|||+..+.+.--.+.-|.......++.+.+++|.||.+|+.+.....+ ..+...+..+. ....||
T Consensus 50 ~~~~~l~iDLg~~~~i~~v~~~~~~~~~~~~~~~~~i~~S~Dg~~w~~v~~~~~~----~~~~~~~~~~~----~~~ary 121 (150)
T 2j1a_A 50 EGPHHLTLELDNVYEINKVKYAPRQDSKNGRITGYKVSVSLDGENFTEVKTGTLE----DNAAIKFIEFD----SVDAKY 121 (150)
T ss_dssp CSCCEEEEEEEEEEEEEEEEEECCSSCCTTEEEEEEEEEESSSSSEEEEEEEECC----SSSSCEEEEEE----EEEEEE
T ss_pred CCCeEEEEECCCCeEEeEEEEeecCCCCCCCEEEEEEEEEcCCCceEEEEEeeEC----CCCceEEEEEC----CeEEEE
Confidence 4678999999986555444444343333456899999999999999987654222 11223334443 236899
Q ss_pred EEEEEeccCC---CCCCCceEEEeceEEee
Q 040529 777 FRVVLMGPTA---DAANSWNFCICFLELYG 803 (806)
Q Consensus 777 fri~q~g~n~---~~~~~~~l~l~~~e~~G 803 (806)
+||..+.... .+.+ ..++|.-||+||
T Consensus 122 vRi~~~~~~~~~~~~~~-~~~~i~Ei~v~G 150 (150)
T 2j1a_A 122 VRLDVTDSVSDQANGRG-KFATAAEVNVHG 150 (150)
T ss_dssp EEEEEEEEECCC--CTT-TCCEESEEEEEC
T ss_pred EEEEEEecccccccCCC-ceEEEEEEEEeC
Confidence 9999997531 1111 368999999998
No 54
>3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A
Probab=97.92 E-value=7.5e-05 Score=71.38 Aligned_cols=96 Identities=17% Similarity=0.185 Sum_probs=68.1
Q ss_pred CCeeEEEecCCceeeEeeeeEeeecCCcccceEEEEEEecCCCCeEeeEEeecCcccccCCccceeeecCCCCCcCeEEE
Q 040529 698 NCTWWMVDIGQDHQLMCNYYTLRMDGSRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPFRFF 777 (806)
Q Consensus 698 ~nsW~~vd~~~~~~~~p~~Y~~r~~~~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~r~f 777 (806)
...|+.|||+..+.|.--.|.-|..+....++.+.+++|+||.+|+.+...... ......++.+. ....||+
T Consensus 53 ~p~~i~vDLg~~~~i~~v~~~~~~~~~~~~~~~~~I~~S~Dg~~W~~v~~~~~~----~~~~~~~~~~~----~~~aRYV 124 (159)
T 3f2z_A 53 LPYEIIIDMNHRVKIAQIELLPRGRGSNNPIKVVRFEASEDGTNWESIGQFGFT----NQDAALKYYVK----SSTARYI 124 (159)
T ss_dssp SCEEEEEEEEEEEEEEEEEEEECCTTCCCCCCEEEEEEESSSSSCEEEEEEECC----CCSSCEEECCC----CEEEEEE
T ss_pred CCEEEEEECCCceEEEEEEEEecCCCCCCCeeEEEEEEEcCCCCeEEeEEeecC----CCCccEEEecC----CceEEEE
Confidence 567999999987666555555555444457899999999999999988654321 11233344432 3469999
Q ss_pred EEEEeccCCCCCCCceEEEeceEEeee
Q 040529 778 RVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 778 ri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
||..++....+ ..++|+-|++||.
T Consensus 125 Ri~~~~~~~~~---~~~si~Ei~vy~~ 148 (159)
T 3f2z_A 125 KLVIPDGVGNG---TVAAIRELDVRGT 148 (159)
T ss_dssp EEEECSSSSCC---SCCEEEEEEEEEE
T ss_pred EEEEEeccCCC---ceEEEEEEEEEcC
Confidence 99999765433 3789999999996
No 55
>3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A, Q8A9F0_bactn, BT_0865, PSI-2, protein structure initiative; 3.00A {Bacteroides thetaiotaomicron}
Probab=97.88 E-value=9.5e-05 Score=71.48 Aligned_cols=97 Identities=19% Similarity=0.141 Sum_probs=69.0
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecCCcccceEEEEEEecCCCCeEeeEEeecCcccccCCccceeeecCCCCCcCeEE
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDGSRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPFRF 776 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~r~ 776 (806)
....|+.|||+..+.|.--.|.-|..+....++.+.+++|+||.+|+.+..... ...+...++.++ ....||
T Consensus 62 ~~p~wi~vDLg~~~~i~~v~~~~r~~~~~~~~~~y~I~~S~Dg~~W~~v~~~~~----~~~~~~~~~~f~----~~~aRY 133 (169)
T 3ggl_A 62 PLPYDIVIDMKQNIQIAQVELLPRGRGSNNPIKVVEFAASEDNVNWTPIGRFGF----TNQDAALEYYVK----SIKARY 133 (169)
T ss_dssp CSCEEEEEEEEEEEEEEEEEEEECCTTCCCCCCEEEEEEESSSSCCEEEEEEEC----CCCSSCEEECCC----CEEEEE
T ss_pred CCCEEEEEECCCcEEEeEEEEEecCCCCCCCeeEEEEEEeCCCCCcEEeEEEEe----ccCCCcEEEEec----CceEEE
Confidence 356899999998766655556555544456799999999999999998865432 111233334332 346999
Q ss_pred EEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 777 FRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 777 fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
+||..++....+ ..++|+-|++||.
T Consensus 134 VRi~~~~~~~~~---~~~si~Ei~vy~~ 158 (169)
T 3ggl_A 134 IRLTIPDDGGNS---TVAAIRELDVKGT 158 (169)
T ss_dssp EEEEECSSSSCC---SCCEEEEEEEEEE
T ss_pred EEEEEEeCCCCC---ceEEEEEEEEEcC
Confidence 999999765432 3789999999996
No 56
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.88 E-value=9.4e-05 Score=65.68 Aligned_cols=95 Identities=15% Similarity=0.104 Sum_probs=75.8
Q ss_pred eEEEEEcCeeeEEEeeHHHHhcCC-HHHHHhhcCCCC----CCCcceEEeCCCCHHHHHHHHhHHhcCccccCCCCchhH
Q 040529 349 DVNIYVESHGLVAQSHKIILSLWS-VPFAKMFTNGMS----ESYSSDVHLRDVSLKAFKIMLEFMYSGELNIEDSLDFGS 423 (806)
Q Consensus 349 DV~l~v~~~~~~~~aHr~ILaa~S-~yF~~mf~~~~~----Es~~~~I~l~~v~~~~f~~lL~fiYtg~l~i~~~~n~~~ 423 (806)
-|+|.|+|.. |...+..|+... .+|.+||.+... .....++-+ |-++..|+.||+|+.+|.+.+...-.
T Consensus 7 ~v~LNVGG~~--f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~--- 80 (107)
T 3drz_A 7 WVRLNVGGTY--FLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLA--- 80 (107)
T ss_dssp EEEEEETTEE--EEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSC---
T ss_pred EEEEEECCEE--EEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCCC---
Confidence 4778999975 999999998875 478999876421 112345655 67999999999999999998765333
Q ss_pred HHHHHHHHHHhhCchHHHHHHHHHHhh
Q 040529 424 LLLQLLILSDQFGVTLLHQECCKLLLE 450 (806)
Q Consensus 424 ~v~~Ll~~A~~l~l~~L~~~c~~~L~~ 450 (806)
...+++-|.+|+++.|++.|.+.|.+
T Consensus 81 -~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 81 -EEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp -HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 57899999999999999999988764
No 57
>2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module, sugar-binding protein, pectin, plant cell WALL, galacturonic acid; 1.35A {Yersinia enterocolitica} PDB: 2jd9_A
Probab=97.74 E-value=0.00037 Score=65.13 Aligned_cols=93 Identities=10% Similarity=0.098 Sum_probs=63.0
Q ss_pred eeEEEecCCceeeEeeeeEeeecCCcccceEEEEEEecCCCCeEeeEEeecCcccccCCccceeeecCCCCCcCeEEEEE
Q 040529 700 TWWMVDIGQDHQLMCNYYTLRMDGSRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPFRFFRV 779 (806)
Q Consensus 700 sW~~vd~~~~~~~~p~~Y~~r~~~~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~r~fri 779 (806)
.|+.|||+..+. .+...+........++.+.+++|.||.+|+.+....... - ......+..+. ....||+||
T Consensus 44 ~~l~vDLg~~~~--v~~v~i~~~~~~~~~~~~~i~~S~Dg~~w~~~~~~~~~~-~-~~~~~~~~~f~----~~~aryvRi 115 (145)
T 2jda_A 44 SWVQLELDKEQS--IENILIVPFKPTERKLKFSIFYSNDGKNWQPLAEGLETS-S-ADKNGEKLTFT----PVTAKYIKL 115 (145)
T ss_dssp EEEEEEEEEEEE--EEEEEEEESSTTTCCEEEEEEEESSSSSCEEEEEEEECC-C-SCSSCEEEEEE----EEEEEEEEE
T ss_pred eeEEEECCCceE--EEEEEEEeccCCCceEEEEEEEeCCCCceEEeeeCcccc-C-CCCccEEEEeC----cccEEEEEE
Confidence 999999998533 344455544334568999999999999999886542111 0 01122333442 236899999
Q ss_pred EEeccCCCCCCCceEEEeceEEeee
Q 040529 780 VLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 780 ~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
..++.+. + ..+.|.-||+||.
T Consensus 116 ~~~~~~~--~--~~~~i~Ei~v~g~ 136 (145)
T 2jda_A 116 DTFGTDV--N--NWSAINEIAINSA 136 (145)
T ss_dssp EEEEESS--S--SEEEEEEEEESCC
T ss_pred EEECCCC--C--cEeEEEEEEEECC
Confidence 9998654 2 3689999999985
No 58
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.59 E-value=2.8e-05 Score=92.57 Aligned_cols=138 Identities=13% Similarity=0.078 Sum_probs=86.3
Q ss_pred HHHHHhHhhccccccccccChHHHhh-cccccccccch---hHHHHHH------HHHHHHhcCCCCCCCCCccccccccc
Q 040529 554 EERLQSVNYLLPFVRFPLLPHALLKK-MENSCLNRQIP---IFDNLVK------EAIIFIESGLAVPGSNQSVRFQHRRS 623 (806)
Q Consensus 554 ~~r~~~l~~Ll~~IRf~lls~~~L~~-v~~~~l~~~~~---~~~~~l~------ea~~~~~~~~~~~~~~~~~r~~~r~~ 623 (806)
..|...+..|++.++|++|...++.. +...+.+...+ .|..+.. ++..+. ..+...+|+.
T Consensus 321 ~~R~~~lE~ldE~e~~~l~~~hY~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~p~rr~ 390 (695)
T 2zwa_A 321 KKELLKVEPFDELEEFHLFCHHYVLCHATNYKEFAFTQGFLFDRSISEINLTVDEDYQLL----------ECECPINRKF 390 (695)
T ss_dssp HHHHHHHSCCCCHHHHHHHHHTEEEEEEESCTTCCCCTTTCCCC----CCCEECSSEEEE----------ECCCTTCCBS
T ss_pred HHHHHhccccchHHHHHHhhccEEEEEEecCCccccCcccCCCCccccccCCCCCceeEe----------ccCCCCCCce
Confidence 66788999999999999999887654 55555544433 2222221 000000 0112223322
Q ss_pred ccccceeeecCCCCceEEEeccc----CCceeEecCCCCcEEEec-c----CCCCCcC------C--CCeEEeecccCCc
Q 040529 624 SFKELQYICDGDSNGVLYFAGTS----YGEHPWVNPVLAKRINIT-A----SSPISRY------T--DPKALASRTYQGL 686 (806)
Q Consensus 624 ~~~e~i~~~gG~~~gvlY~iGg~----~~sve~ynP~~~~w~~vt-~----s~~~~r~------~--~~~~~v~~g~~g~ 686 (806)
. ...++| +.||++||. .+++++|||.+++|..+. + .+|.+|. . ++++|+.||+.+.
T Consensus 391 g---~~~~~~----~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~ 463 (695)
T 2zwa_A 391 G---DVDVAG----NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAP 463 (695)
T ss_dssp C---EEEECS----SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSST
T ss_pred e---EEEEEC----CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCC
Confidence 2 111122 357777774 357999999999999887 4 2566662 3 7889999998764
Q ss_pred c--ccCCeeecCCCCeeEEEecCC
Q 040529 687 S--FAGPRMEDGHNCTWWMVDIGQ 708 (806)
Q Consensus 687 ~--~~~~~~y~~~~nsW~~vd~~~ 708 (806)
. ..+.+.||+.+++|..++..+
T Consensus 464 ~~~~~dv~~yd~~t~~W~~~~~~p 487 (695)
T 2zwa_A 464 HQGLSDNWIFDMKTREWSMIKSLS 487 (695)
T ss_dssp TCBCCCCEEEETTTTEEEECCCCS
T ss_pred CCccccEEEEeCCCCcEEECCCCC
Confidence 3 356778999999999986443
No 59
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A*
Probab=97.58 E-value=0.0003 Score=67.37 Aligned_cols=92 Identities=11% Similarity=0.130 Sum_probs=63.4
Q ss_pred CCeeEEEecCCceeeEeeeeEeeecCCcccceEEEEEEecCCCCeEeeEEeecCcccccCCccceeeecCCCCCcCeEEE
Q 040529 698 NCTWWMVDIGQDHQLMCNYYTLRMDGSRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPFRFF 777 (806)
Q Consensus 698 ~nsW~~vd~~~~~~~~p~~Y~~r~~~~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~r~f 777 (806)
...|+.|||+..+.|.--.|.-|..+....++.+.+++|+||++|+.+..-. ........+..++ + ...||+
T Consensus 69 ~p~~i~iDLg~~~~I~~v~~~~r~~~~~~~~~~y~I~~S~DG~~W~~v~~g~----~~~~~~~~~~~f~-~---v~aRYV 140 (161)
T 4a41_A 69 LPQSITLELGGSYEINKFTYLPRSGAKNGNITKYELHVSEDGNNFRKISEGN----WDDSGSLKTLKFN-S---TKATHV 140 (161)
T ss_dssp SCEEEEEEEEEEEEEEEEEEECCSSCCTTCEEEEEEEEESSSSCEEEEEEEE----CCSSSSCEEEEEE-E---EEEEEE
T ss_pred CCEEEEEEcCCCEEEeEEEEEecCCCCCCcEEEEEEEEECCCCceEEeeeee----ecCCCcEEEEEeC-C---ceEEEE
Confidence 5689999999876665555555544444568999999999999999876431 1112223344443 1 268999
Q ss_pred EEEEeccCCCCCCCceEEEeceEEe
Q 040529 778 RVVLMGPTADAANSWNFCICFLELY 802 (806)
Q Consensus 778 ri~q~g~n~~~~~~~~l~l~~~e~~ 802 (806)
||..+..+ ++ +++|.-||+|
T Consensus 141 Ri~~~~~~--~~---~~si~E~~Vy 160 (161)
T 4a41_A 141 KLVALEGV--GG---FASAAELNVF 160 (161)
T ss_dssp EEEEEEEG--GG---CCEESEEEEE
T ss_pred EEEEEEcc--CC---eEEeEeEEEE
Confidence 99998643 22 6788989987
No 60
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.54 E-value=0.00037 Score=73.40 Aligned_cols=70 Identities=16% Similarity=0.128 Sum_probs=54.1
Q ss_pred ceEEEecccCC-----ceeEecCCCCcEEEeccCCCCCcC------CCCeEEeecccCCcc---ccCCeeecCCCCeeEE
Q 040529 638 GVLYFAGTSYG-----EHPWVNPVLAKRINITASSPISRY------TDPKALASRTYQGLS---FAGPRMEDGHNCTWWM 703 (806)
Q Consensus 638 gvlY~iGg~~~-----sve~ynP~~~~w~~vt~s~~~~r~------~~~~~~v~~g~~g~~---~~~~~~y~~~~nsW~~ 703 (806)
+.||++||..+ +++.|||.+++|..+. ++|.+|. .++++|+.||+.+.. ....+.||+.+++|..
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~ 187 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA-PMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTY 187 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTEEEEEC-CCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEE
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCeEeecC-CCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEE
Confidence 48999999653 7899999999999885 4566663 456889999986653 3556679999999999
Q ss_pred EecCC
Q 040529 704 VDIGQ 708 (806)
Q Consensus 704 vd~~~ 708 (806)
+...+
T Consensus 188 ~~~~p 192 (302)
T 2xn4_A 188 IAEMS 192 (302)
T ss_dssp ECCCS
T ss_pred CCCCc
Confidence 86443
No 61
>4gwi_A Lectinolysin, platelet aggregation factor SM-HPAF; cholesterol-dependent cytolysins, lewis antigens, F-type LEC glycan binding; HET: BDZ; 1.60A {Streptococcus mitis} PDB: 4gwj_A* 3lei_A* 3leg_A* 3le0_A* 3lek_A*
Probab=97.45 E-value=0.00038 Score=65.99 Aligned_cols=97 Identities=12% Similarity=0.195 Sum_probs=67.7
Q ss_pred ecCCCCeeEEEecCCceeeEeeeeEeeecCC-cccceEEEE-EEecCCCCeEeeEEeecCcccccCCccceeeecCCCCC
Q 040529 694 EDGHNCTWWMVDIGQDHQLMCNYYTLRMDGS-RAYIRYWNF-QGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNAL 771 (806)
Q Consensus 694 y~~~~nsW~~vd~~~~~~~~p~~Y~~r~~~~-~~~lr~W~~-~gs~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~ 771 (806)
+....+.|++||||..+.|.--...-|.+.. ...++...+ +||.||.+|..... .+ . ..+.+.+..+. .
T Consensus 49 t~~~~~~W~~VDLg~~~~v~~V~i~nr~d~~~~~r~~~~~I~v~s~dg~~w~~~~~--~~--~-~~~~~~~i~~~----~ 119 (153)
T 4gwi_A 49 TNFEDNAWWQVDLGKTENVGKVKLYNRGDGNVANRLSNFDVVLLNEAKQEVARQHF--DS--L-NGKAELEVFFT----A 119 (153)
T ss_dssp CCSBTTCEEEEEEEEEEEEEEEEEEECCSTTCGGGSCSEEEEEECTTSCEEEEEEE--SC--C-TTCSEEEEEEE----E
T ss_pred CCCCCCCEEEEECCCCEEEEEEEEEcccCCchhhcccceEEEEECCCCCeeeeeEE--ec--C-CCCCEEEEEeC----C
Confidence 4566889999999997666554444444443 446788877 78889999987532 11 1 23455666664 2
Q ss_pred cCeEEEEEEEeccCCCCCCCceEEEeceEEeeec
Q 040529 772 RPFRFFRVVLMGPTADAANSWNFCICFLELYGYF 805 (806)
Q Consensus 772 ~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~~ 805 (806)
..-||+||..+|.+. .|+|+-||+||.-
T Consensus 120 ~~gRYVrv~~~~~~~------~lsL~EveVyg~~ 147 (153)
T 4gwi_A 120 KDARYVKVELKTKNT------PLSLAEVEVFRSA 147 (153)
T ss_dssp EEEEEEEEEECSSSB------CCCEEEEEEEEBC
T ss_pred ceEEEEEEEEEcCCC------ceEEEEEEEECcc
Confidence 358999999998642 5789999999963
No 62
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.43 E-value=0.0013 Score=69.01 Aligned_cols=70 Identities=16% Similarity=0.205 Sum_probs=54.2
Q ss_pred ceEEEecccC-----CceeEecCCCCcEEEeccCCCCCcC------CCCeEEeecccCCcc-ccCCeeecCCCCeeEEEe
Q 040529 638 GVLYFAGTSY-----GEHPWVNPVLAKRINITASSPISRY------TDPKALASRTYQGLS-FAGPRMEDGHNCTWWMVD 705 (806)
Q Consensus 638 gvlY~iGg~~-----~sve~ynP~~~~w~~vt~s~~~~r~------~~~~~~v~~g~~g~~-~~~~~~y~~~~nsW~~vd 705 (806)
+.||++||.. ..++.|||.+++|..+. .+|.+|. .++++|+.||..+.. ....+.||+.+++|..++
T Consensus 160 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 160 GVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT-PMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCcccceEEEEeCCCCcEEeCC-CCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECC
Confidence 4899999964 47999999999999885 4566663 456789999987654 345567999999999986
Q ss_pred cCC
Q 040529 706 IGQ 708 (806)
Q Consensus 706 ~~~ 708 (806)
..+
T Consensus 239 ~~p 241 (301)
T 2vpj_A 239 SMT 241 (301)
T ss_dssp CCS
T ss_pred CCC
Confidence 443
No 63
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.41 E-value=0.00066 Score=71.38 Aligned_cols=70 Identities=13% Similarity=0.093 Sum_probs=53.4
Q ss_pred ceEEEecccC-----CceeEecCCCCc---EEEeccCCCCCcC------CCCeEEeecccCCccc-cCCeeecCCCCeeE
Q 040529 638 GVLYFAGTSY-----GEHPWVNPVLAK---RINITASSPISRY------TDPKALASRTYQGLSF-AGPRMEDGHNCTWW 702 (806)
Q Consensus 638 gvlY~iGg~~-----~sve~ynP~~~~---w~~vt~s~~~~r~------~~~~~~v~~g~~g~~~-~~~~~y~~~~nsW~ 702 (806)
+.||++||.. ..++.|||.+++ |..+. ++|.+|. .++++|+.||+.+... ...+.||+.+++|.
T Consensus 63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~-~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVA-PMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEEC-CCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECC-CCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 4788888854 479999999999 99885 4566663 3568899999876543 44567999999999
Q ss_pred EEecCC
Q 040529 703 MVDIGQ 708 (806)
Q Consensus 703 ~vd~~~ 708 (806)
.+...+
T Consensus 142 ~~~~~p 147 (301)
T 2vpj_A 142 MLGDMQ 147 (301)
T ss_dssp EEEECS
T ss_pred ECCCCC
Confidence 986543
No 64
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.38 E-value=0.00082 Score=70.73 Aligned_cols=70 Identities=17% Similarity=0.135 Sum_probs=54.0
Q ss_pred ceEEEeccc-------CCceeEecCCCCcEEEeccCCCCCcC------CCCeEEeecccCCccc-cCCeeecCCCCeeEE
Q 040529 638 GVLYFAGTS-------YGEHPWVNPVLAKRINITASSPISRY------TDPKALASRTYQGLSF-AGPRMEDGHNCTWWM 703 (806)
Q Consensus 638 gvlY~iGg~-------~~sve~ynP~~~~w~~vt~s~~~~r~------~~~~~~v~~g~~g~~~-~~~~~y~~~~nsW~~ 703 (806)
+.||++||. ...++.|||.+++|..+. .+|.+|. .++++|+.||+++... ...+.||+.+++|..
T Consensus 156 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 234 (302)
T 2xn4_A 156 GLLYAVGGYDVASRQCLSTVECYNATTNEWTYIA-EMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ 234 (302)
T ss_dssp TEEEEECCEETTTTEECCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEE
T ss_pred CEEEEEeCCCCCCCccccEEEEEeCCCCcEEECC-CCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEee
Confidence 489999985 346899999999999885 4566663 3567899999876543 456679999999999
Q ss_pred EecCC
Q 040529 704 VDIGQ 708 (806)
Q Consensus 704 vd~~~ 708 (806)
+...+
T Consensus 235 ~~~~~ 239 (302)
T 2xn4_A 235 VADMN 239 (302)
T ss_dssp ECCCS
T ss_pred CCCCC
Confidence 87443
No 65
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.38 E-value=0.00086 Score=70.73 Aligned_cols=70 Identities=20% Similarity=0.202 Sum_probs=53.6
Q ss_pred ceEEEeccc---------CCceeEecCCCCcEEEeccCCCCCcC------CCCeEEeecccCCccc-cCCeeecCCCCee
Q 040529 638 GVLYFAGTS---------YGEHPWVNPVLAKRINITASSPISRY------TDPKALASRTYQGLSF-AGPRMEDGHNCTW 701 (806)
Q Consensus 638 gvlY~iGg~---------~~sve~ynP~~~~w~~vt~s~~~~r~------~~~~~~v~~g~~g~~~-~~~~~y~~~~nsW 701 (806)
+.||++||. ..+++.|||.+++|..+. ++|.+|. .++++|+.||+.+... ...+.||+.+++|
T Consensus 150 ~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 228 (306)
T 3ii7_A 150 GLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC-PMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEW 228 (306)
T ss_dssp TEEEEECCEESCTTTCEECCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEE
T ss_pred CEEEEECCCCCCCCcccccceEEEeCCCCCeEEECC-CccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcE
Confidence 389999985 456899999999999885 4566663 4567899999766533 4556799999999
Q ss_pred EEEecCC
Q 040529 702 WMVDIGQ 708 (806)
Q Consensus 702 ~~vd~~~ 708 (806)
..+...+
T Consensus 229 ~~~~~~p 235 (306)
T 3ii7_A 229 KMVSPMP 235 (306)
T ss_dssp EECCCCS
T ss_pred EECCCCC
Confidence 9986443
No 66
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.35 E-value=0.001 Score=70.46 Aligned_cols=70 Identities=20% Similarity=0.119 Sum_probs=54.1
Q ss_pred ceEEEecccC-----CceeEecCCCCcEEEeccCCCCCcC------CCCeEEeecccCCccc-cCCeeecCCCCeeEEEe
Q 040529 638 GVLYFAGTSY-----GEHPWVNPVLAKRINITASSPISRY------TDPKALASRTYQGLSF-AGPRMEDGHNCTWWMVD 705 (806)
Q Consensus 638 gvlY~iGg~~-----~sve~ynP~~~~w~~vt~s~~~~r~------~~~~~~v~~g~~g~~~-~~~~~y~~~~nsW~~vd 705 (806)
+.||++||.. ..++.|||.+++|..+. .+|.+|. .++++|+.||+.+... ...+.||+.+++|..++
T Consensus 169 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 169 RLLYAVGGFDGTNRLNSAECYYPERNEWRMIT-AMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred CEEEEEeCCCCCCcCceEEEEeCCCCeEeeCC-CCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC
Confidence 4899999964 47999999999998875 4566663 3567899999876543 45567999999999987
Q ss_pred cCC
Q 040529 706 IGQ 708 (806)
Q Consensus 706 ~~~ 708 (806)
..+
T Consensus 248 ~~p 250 (308)
T 1zgk_A 248 PMK 250 (308)
T ss_dssp CCS
T ss_pred CCC
Confidence 443
No 67
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.33 E-value=0.00057 Score=60.96 Aligned_cols=87 Identities=13% Similarity=0.140 Sum_probs=60.7
Q ss_pred eEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcC--CCCCCCcceEEeCCCCHHHHHHHHhHHhcCc------cccCCCCc
Q 040529 349 DVNIYVESHGLVAQSHKIILSLWSVPFAKMFTN--GMSESYSSDVHLRDVSLKAFKIMLEFMYSGE------LNIEDSLD 420 (806)
Q Consensus 349 DV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~--~~~Es~~~~I~l~~v~~~~f~~lL~fiYtg~------l~i~~~~n 420 (806)
-|+|...|+. +|.+++.+ |..|..++.|+.. .+.|.....|.|++++..+++.+++|++... -.+...+-
T Consensus 18 ~v~L~SsDG~-~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~v 95 (112)
T 1vcb_B 18 YVKLISSDGH-EFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 95 (112)
T ss_dssp EEEEECTTSC-EEEEEHHH-HHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCC
T ss_pred EEEEEcCCCC-EEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCccc
Confidence 4667765553 59999995 6799999999985 3345556789999999999999999997533 11211111
Q ss_pred hhHHHHHHHHHHHhhCc
Q 040529 421 FGSLLLQLLILSDQFGV 437 (806)
Q Consensus 421 ~~~~v~~Ll~~A~~l~l 437 (806)
-.+.+++|+.||++|++
T Consensus 96 d~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 96 APEIALELLMAANFLDC 112 (112)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 12469999999999975
No 68
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.33 E-value=0.001 Score=70.16 Aligned_cols=70 Identities=14% Similarity=0.019 Sum_probs=53.7
Q ss_pred ceEEEecccC------CceeEecCCCCcEEEeccCCCCCcC------CCCeEEeecccCCcc-----ccCCeeecCCCCe
Q 040529 638 GVLYFAGTSY------GEHPWVNPVLAKRINITASSPISRY------TDPKALASRTYQGLS-----FAGPRMEDGHNCT 700 (806)
Q Consensus 638 gvlY~iGg~~------~sve~ynP~~~~w~~vt~s~~~~r~------~~~~~~v~~g~~g~~-----~~~~~~y~~~~ns 700 (806)
+.||++||.. ..++.|||.+++|..+ +++|.+|. .++++|+.||+.+.. ....+.||+.+++
T Consensus 102 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~ 180 (306)
T 3ii7_A 102 GKIYTSGGSEVGNSALYLFECYDTRTESWHTK-PSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET 180 (306)
T ss_dssp TEEEEECCBBTTBSCCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTE
T ss_pred CEEEEECCCCCCCcEeeeEEEEeCCCCceEeC-CCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCe
Confidence 4899999965 3799999999999887 44566663 456889999976553 3455679999999
Q ss_pred eEEEecCC
Q 040529 701 WWMVDIGQ 708 (806)
Q Consensus 701 W~~vd~~~ 708 (806)
|..++..+
T Consensus 181 W~~~~~~p 188 (306)
T 3ii7_A 181 WTELCPMI 188 (306)
T ss_dssp EEEECCCS
T ss_pred EEECCCcc
Confidence 99986433
No 69
>4a3z_A GH89_CBM32, alpha-N-acetylglucosaminidase family protein; hydrolase, family 32 carbohydrate-binding module; HET: MSE; 1.55A {Clostridium perfringens} PDB: 4a6o_A*
Probab=97.24 E-value=0.0019 Score=61.72 Aligned_cols=94 Identities=5% Similarity=0.080 Sum_probs=61.4
Q ss_pred CCeeEEEecCCceeeEeeeeEeeecCCcccceEEEEEEecCCCCeEeeEEeecCcccccCCccceeeecCCCCCcCeEEE
Q 040529 698 NCTWWMVDIGQDHQLMCNYYTLRMDGSRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPFRFF 777 (806)
Q Consensus 698 ~nsW~~vd~~~~~~~~p~~Y~~r~~~~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~r~f 777 (806)
...|++|||+..+.+ +...|..... .....+.+++|.||++|+.+...... ..+...++.++ .....||+
T Consensus 65 ~~~Wi~VDLg~~~~v--~~v~i~~~~~-~~~~~y~IevS~Dg~~W~~v~~~t~~----~~~~~~~~~~~---~~~~aRYV 134 (161)
T 4a3z_A 65 MPANATIDLEGNNFV--DFLELHFEKE-GFRFQFKVEVEDESGNRETVLDMTSN----TEDNKKSYNIP---VKKEISKI 134 (161)
T ss_dssp SSEEEEEEEEEEEEE--EEEEEECSST-TCCEEEEEEEECTTCCEEEEEECTTC----CSCCCSEEEEE---EEEEEEEE
T ss_pred CCeEEEEECCCcEEE--eEEEEEECCC-CceEEEEEEEEcCCCCEEEEEEecCC----CCCccEEEEcC---CCcEEEEE
Confidence 579999999985333 3444443322 23478999999999999988654322 12223344443 23368999
Q ss_pred EEEEeccCCCCC--CCceEEEeceEEe
Q 040529 778 RVVLMGPTADAA--NSWNFCICFLELY 802 (806)
Q Consensus 778 ri~q~g~n~~~~--~~~~l~l~~~e~~ 802 (806)
||..++....|. + ...+|.-||+|
T Consensus 135 Rv~~~~~~~~g~~~~-~~~si~E~~V~ 160 (161)
T 4a3z_A 135 HATITGKAPGGSFDQ-AWAAIAEIKAM 160 (161)
T ss_dssp EEEEEEECSCSTTTT-CCCEESEEEEE
T ss_pred EEEEEecCCCccccC-CCCEEEEEEEe
Confidence 999999877631 1 23588888886
No 70
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.14 E-value=0.0012 Score=69.91 Aligned_cols=70 Identities=16% Similarity=0.123 Sum_probs=53.8
Q ss_pred ceEEEecccC-----CceeEecCCCCcEEEeccCCCCCcC------CCCeEEeecccCCccc-cCCeeecCCCCeeEEEe
Q 040529 638 GVLYFAGTSY-----GEHPWVNPVLAKRINITASSPISRY------TDPKALASRTYQGLSF-AGPRMEDGHNCTWWMVD 705 (806)
Q Consensus 638 gvlY~iGg~~-----~sve~ynP~~~~w~~vt~s~~~~r~------~~~~~~v~~g~~g~~~-~~~~~y~~~~nsW~~vd 705 (806)
+.||++||.. ..++.|||.+++|..+. .+|.+|. .++++|+.||+++... ...+.||+.+++|..+.
T Consensus 216 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 294 (308)
T 1zgk_A 216 NCIYAAGGYDGQDQLNSVERYDVETETWTFVA-PMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVT 294 (308)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE
T ss_pred CEEEEEeCCCCCCccceEEEEeCCCCcEEECC-CCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecC
Confidence 4788999864 57999999999998875 4566663 3568899999876543 44567999999999985
Q ss_pred cCC
Q 040529 706 IGQ 708 (806)
Q Consensus 706 ~~~ 708 (806)
..+
T Consensus 295 ~~p 297 (308)
T 1zgk_A 295 RMT 297 (308)
T ss_dssp ECS
T ss_pred CCC
Confidence 443
No 71
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=97.13 E-value=0.00027 Score=68.08 Aligned_cols=88 Identities=11% Similarity=0.229 Sum_probs=70.3
Q ss_pred cEEEEecCCCeEEEeeeeeecccCcccCCC----C-------CCceEEeCCCCHHHHHHHHHhhccCcc-----------
Q 040529 210 DMFFIVGTEEKLVPAHKVILQASGNFPLSL----T-------GEGIVQLQEVIYPILHALLQFIYTGRT----------- 267 (806)
Q Consensus 210 Dv~~~v~~~~~~~~aHk~ILaarS~~F~~~----~-------~~~~i~l~~v~~~~f~~lL~fiYtg~~----------- 267 (806)
-|+|+..| |+.|.+++.+ |..|..++.+ + ....|.|++|+..+|+.+++|++...-
T Consensus 8 ~i~L~SsD-G~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~ 85 (169)
T 3v7d_A 8 NVVLVSGE-GERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDS 85 (169)
T ss_dssp EEEEECTT-CCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC------
T ss_pred eEEEEeCC-CCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCcccccccc
Confidence 57787764 9999999997 7779887432 1 126799999999999999999986542
Q ss_pred --------------cCCCCCchhHHHhhhhccchhhHHHHHHHHHh
Q 040529 268 --------------QISEPLLGPLWALSSQFQVMPLVKQCEETMER 299 (806)
Q Consensus 268 --------------~i~~~~~~~ll~~A~~~~l~~L~~~C~~~l~~ 299 (806)
.+..+.+.+|+.||++|++..|.+.|++.+..
T Consensus 86 ~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~ 131 (169)
T 3v7d_A 86 RKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAE 131 (169)
T ss_dssp --CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 23445678999999999999999999998853
No 72
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.13 E-value=0.0012 Score=69.88 Aligned_cols=69 Identities=9% Similarity=0.131 Sum_probs=51.4
Q ss_pred eEEEeccc------CCceeEecCCCCcEEEeccCCCCCcC------CCCeEEeecccCCccc-cCCeeecCCCCeeEEEe
Q 040529 639 VLYFAGTS------YGEHPWVNPVLAKRINITASSPISRY------TDPKALASRTYQGLSF-AGPRMEDGHNCTWWMVD 705 (806)
Q Consensus 639 vlY~iGg~------~~sve~ynP~~~~w~~vt~s~~~~r~------~~~~~~v~~g~~g~~~-~~~~~y~~~~nsW~~vd 705 (806)
.||++||. ..+++.|||.+++|..+. ++|.+|. .++++|+.||+.+... ...+.||+.+++|..++
T Consensus 150 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 150 LVYVIGGKGSDRKCLNKMCVYDPKKFEWKELA-PMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp EEEEECCBCTTSCBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC
T ss_pred EEEEEeCCCCCCcccceEEEEeCCCCeEEECC-CCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECC
Confidence 56666665 358999999999998875 4566663 4568899999866543 44567999999999987
Q ss_pred cCC
Q 040529 706 IGQ 708 (806)
Q Consensus 706 ~~~ 708 (806)
..+
T Consensus 229 ~~p 231 (315)
T 4asc_A 229 AFP 231 (315)
T ss_dssp CCS
T ss_pred CCC
Confidence 533
No 73
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=97.11 E-value=0.00034 Score=60.66 Aligned_cols=74 Identities=8% Similarity=0.053 Sum_probs=59.0
Q ss_pred EEEEecCCCeEEEeeeeeecccCcccCCC---------CCCceEEeCCCCHHHHHHHHHhhccCc-----------ccCC
Q 040529 211 MFFIVGTEEKLVPAHKVILQASGNFPLSL---------TGEGIVQLQEVIYPILHALLQFIYTGR-----------TQIS 270 (806)
Q Consensus 211 v~~~v~~~~~~~~aHk~ILaarS~~F~~~---------~~~~~i~l~~v~~~~f~~lL~fiYtg~-----------~~i~ 270 (806)
|+|+.. +|+.|.+++.+ |..|+.++.+ .....|.|++|+..+++.+++|+|... ..+.
T Consensus 3 v~L~Ss-Dg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd 80 (96)
T 2fnj_C 3 VKLISS-DGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 80 (96)
T ss_dssp EEEECT-TSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCC
T ss_pred EEEEec-CCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccC
Confidence 667766 49999999996 8889998432 223589999999999999999999644 2567
Q ss_pred CCCchhHHHhhhhccc
Q 040529 271 EPLLGPLWALSSQFQV 286 (806)
Q Consensus 271 ~~~~~~ll~~A~~~~l 286 (806)
.+.+.+|+.||+++++
T Consensus 81 ~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 81 PEIALELLMAANFLDC 96 (96)
T ss_dssp TTTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 8889999999998864
No 74
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.05 E-value=0.0016 Score=57.72 Aligned_cols=85 Identities=12% Similarity=0.167 Sum_probs=68.0
Q ss_pred EEEEecCCCeEEEeeeeeecccCcc-c----CC-------CCCCceEEeCCCCHHHHHHHHHhhccCcccCCCCC-chhH
Q 040529 211 MFFIVGTEEKLVPAHKVILQASGNF-P----LS-------LTGEGIVQLQEVIYPILHALLQFIYTGRTQISEPL-LGPL 277 (806)
Q Consensus 211 v~~~v~~~~~~~~aHk~ILaarS~~-F----~~-------~~~~~~i~l~~v~~~~f~~lL~fiYtg~~~i~~~~-~~~l 277 (806)
|+|.|| |+.|...+..|+...+- | .. .....++.+ |-+|..|..+|+|+.+|.+.++.+. ...+
T Consensus 8 v~LNVG--G~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~~~l 84 (107)
T 3drz_A 8 VRLNVG--GTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGV 84 (107)
T ss_dssp EEEEET--TEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCHHHH
T ss_pred EEEEEC--CEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCCCHHHH
Confidence 788897 89999999999876533 3 11 113445666 7899999999999999999876553 4789
Q ss_pred HHhhhhccchhhHHHHHHHHH
Q 040529 278 WALSSQFQVMPLVKQCEETME 298 (806)
Q Consensus 278 l~~A~~~~l~~L~~~C~~~l~ 298 (806)
++.|..|+++.|++.|++-+.
T Consensus 85 ~~Ea~fy~l~~L~~~l~~~i~ 105 (107)
T 3drz_A 85 LEEAEFYNITSLIKLVKDKIR 105 (107)
T ss_dssp HHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHh
Confidence 999999999999999988664
No 75
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.99 E-value=0.001 Score=70.63 Aligned_cols=66 Identities=14% Similarity=0.061 Sum_probs=50.2
Q ss_pred ceEEEecccC-----CceeEecCCCCcEEEeccCCCCCcC------CCCeEEeecccCCc----------cccCCeeecC
Q 040529 638 GVLYFAGTSY-----GEHPWVNPVLAKRINITASSPISRY------TDPKALASRTYQGL----------SFAGPRMEDG 696 (806)
Q Consensus 638 gvlY~iGg~~-----~sve~ynP~~~~w~~vt~s~~~~r~------~~~~~~v~~g~~g~----------~~~~~~~y~~ 696 (806)
+.||++||.. ..++.|||.+++|..+.+ +|.+|. .++++|+.||+.+. .....+.||+
T Consensus 207 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~ 285 (318)
T 2woz_A 207 GKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTE-FPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYED 285 (318)
T ss_dssp TEEEEEEEEETTEEEEEEEEEETTTCCEEECCC-CSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEET
T ss_pred CEEEEEcCcCCCCccceEEEEECCCCeEEECCC-CCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeC
Confidence 4889999864 378999999999988754 566664 35688999997652 1244556999
Q ss_pred CCCeeEEE
Q 040529 697 HNCTWWMV 704 (806)
Q Consensus 697 ~~nsW~~v 704 (806)
.+++|..+
T Consensus 286 ~~~~W~~~ 293 (318)
T 2woz_A 286 DKKEWAGM 293 (318)
T ss_dssp TTTEEEEE
T ss_pred CCCEehhh
Confidence 99999998
No 76
>2yfu_A Carbohydrate binding family 6; sugar binding protein; 1.65A {Clostridium thermocellum} PDB: 2y8j_A* 2y9i_A* 2y9s_A 2yb7_A* 2y8m_A 2yfz_A* 2yg0_A*
Probab=96.92 E-value=0.0015 Score=61.65 Aligned_cols=92 Identities=18% Similarity=0.175 Sum_probs=60.7
Q ss_pred CeeEEEecCCce--eeEeeeeEeeecCCcccceEEEEEEec--CCCCeEeeEEeecCcccccCCccceeeecCCCCCcCe
Q 040529 699 CTWWMVDIGQDH--QLMCNYYTLRMDGSRAYIRYWNFQGSM--DGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPF 774 (806)
Q Consensus 699 nsW~~vd~~~~~--~~~p~~Y~~r~~~~~~~lr~W~~~gs~--dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~ 774 (806)
..|+.||+|..+ .+.--.|+-|.+. ...+.-.++|||+ |+.+|..|..-.+.. . ...|.......+.+|
T Consensus 44 ~~~i~iDLG~~~~~~l~~f~Y~Pr~~~-~~~miGg~fegSnd~Df~~~~tL~~I~~~P-----~-~~~~~~v~~~~~k~y 116 (155)
T 2yfu_A 44 GCWLGLDFGEGVRNVITQIKFCPRSGY-EQRMIGGIFQGANKEDFSDAVTLFTITSLP-----G-SGTLTSVDVDNPTGF 116 (155)
T ss_dssp SCEEEEECCTTCCEEEEEEEEECCTTC-GGGGTTCEEEEESSTTCTTCEEEEECCSCC-----C-TTSCEEEECCCCCEE
T ss_pred CceEEEECCCCcceEEeeEEEecCccc-ccCCcEEEEEEECCCCCCCeEEEEEecCCC-----c-ccccEEEECCCCCcE
Confidence 579999999975 4555556667663 3356689999999 569999887432211 1 112332111245689
Q ss_pred EEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 775 RFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 775 r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
||+|+..... + +..|.-||||+.
T Consensus 117 RYiRy~~p~~----~---~~niAEi~fy~~ 139 (155)
T 2yfu_A 117 RYVRYLSPDG----S---NGNIAELQFFGT 139 (155)
T ss_dssp SEEEEECCTT----S---TTCBSEEEEEEE
T ss_pred EEEEEEcCCC----C---eEEEEEEEEEec
Confidence 9999997763 2 445788999975
No 77
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.81 E-value=0.0041 Score=65.83 Aligned_cols=69 Identities=12% Similarity=0.029 Sum_probs=50.4
Q ss_pred eEEEeccc--------CCceeEecCCCCcEEEeccCCCCCcC------CCCeEEeeccc-CCcc-ccCCeeecCCCCeeE
Q 040529 639 VLYFAGTS--------YGEHPWVNPVLAKRINITASSPISRY------TDPKALASRTY-QGLS-FAGPRMEDGHNCTWW 702 (806)
Q Consensus 639 vlY~iGg~--------~~sve~ynP~~~~w~~vt~s~~~~r~------~~~~~~v~~g~-~g~~-~~~~~~y~~~~nsW~ 702 (806)
.||++||. .++++.|||.+++|..+. ++|.+|. .++++|+.||+ .+.. ....+.||+.+++|.
T Consensus 100 ~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 178 (315)
T 4asc_A 100 SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD-PLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWK 178 (315)
T ss_dssp EEEEECCEESSTTCCBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEE
T ss_pred EEEEEeCCcCCCCCcccceEEEECCCCCcEeECC-CCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEE
Confidence 66666663 247999999999998875 4566664 45678999997 3332 355667999999999
Q ss_pred EEecCC
Q 040529 703 MVDIGQ 708 (806)
Q Consensus 703 ~vd~~~ 708 (806)
.+...+
T Consensus 179 ~~~~~p 184 (315)
T 4asc_A 179 ELAPMQ 184 (315)
T ss_dssp ECCCCS
T ss_pred ECCCCC
Confidence 986433
No 78
>4a42_A GH89_CBM32-4, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: MSE; 1.55A {Clostridium perfringens}
Probab=96.79 E-value=0.0054 Score=57.71 Aligned_cols=88 Identities=17% Similarity=0.188 Sum_probs=57.2
Q ss_pred CCeeEEEecCCceeeEeeeeEeeecCCcccceEEEEEEecCCCCeEeeEEeecCcccccCCccceeeecCCCCCcCeEEE
Q 040529 698 NCTWWMVDIGQDHQLMCNYYTLRMDGSRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPFRFF 777 (806)
Q Consensus 698 ~nsW~~vd~~~~~~~~p~~Y~~r~~~~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~r~f 777 (806)
.+.|++|||+..+.+ +...+.... . ..+.+.++.|+||.+|+.+....+ ........+..+. .....||+
T Consensus 61 ~~p~~~VDLg~~~~V--~~v~i~~~r-~-~v~~y~I~~S~DG~~W~~~~~~g~---~~~~~~~~~~~f~---~pv~aRYV 130 (149)
T 4a42_A 61 EEKSVTFDLSKEKDI--SAIDIVSKG-N-SPLKYSIEISNDGTEWTKIVDENN---NEENKAVYSNILK---SGKIGRFV 130 (149)
T ss_dssp SSEEEEEEEEEEEEC--CEEEEEECS-S-SCCCEEEEEESSSSSCEEEEEETT---CCCCCSEEEEECC---TTCEEEEE
T ss_pred CCCeEEEECCCcEEE--EEEEEEcCC-C-CcEEEEEEEEcCCCeEeEeEEcce---eCCCCceEEEEcC---CCceEEEE
Confidence 566779999985444 333332221 1 178999999999999987543211 1122334455554 23368999
Q ss_pred EEEEeccCCCCCCCceEEEeceEEee
Q 040529 778 RVVLMGPTADAANSWNFCICFLELYG 803 (806)
Q Consensus 778 ri~q~g~n~~~~~~~~l~l~~~e~~G 803 (806)
||+.++. .++|+-||+|+
T Consensus 131 Ri~~~~~--------~~si~E~~Vy~ 148 (149)
T 4a42_A 131 RFNFNSE--------NVKIGEIKIYK 148 (149)
T ss_dssp EEEECSS--------SCCEEEEEEEE
T ss_pred EEEEecC--------CcEEEEEEEEC
Confidence 9999875 45788999985
No 79
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=96.75 E-value=0.00081 Score=58.61 Aligned_cols=74 Identities=9% Similarity=0.137 Sum_probs=58.5
Q ss_pred EEEEecCCCeEEEeeeeeecccCcccCCC------CCCceEEeCCCCHHHHHHHHHhhccCc--------------ccCC
Q 040529 211 MFFIVGTEEKLVPAHKVILQASGNFPLSL------TGEGIVQLQEVIYPILHALLQFIYTGR--------------TQIS 270 (806)
Q Consensus 211 v~~~v~~~~~~~~aHk~ILaarS~~F~~~------~~~~~i~l~~v~~~~f~~lL~fiYtg~--------------~~i~ 270 (806)
|+|+.. +|+.|.+++.+ |..|..++.+ .....|.|++|+..+++.+++|+|... ..+.
T Consensus 6 v~L~Ss-Dg~~f~V~~~v-A~~S~~ik~ml~~~~e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd 83 (99)
T 1hv2_A 6 VTLVSK-DDKEYEISRSA-AMISPTLKAMIEGPFRESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEIP 83 (99)
T ss_dssp EEEEET-TTEEEEEEHHH-HTTCHHHHHHHHSSTTTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCC
T ss_pred EEEEec-CCCEEEECHHH-HHHhHHHHHHHhcccccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccCC
Confidence 677776 49999999997 8889997432 234689999999999999999999654 2345
Q ss_pred CCCchhHHHhhhhccc
Q 040529 271 EPLLGPLWALSSQFQV 286 (806)
Q Consensus 271 ~~~~~~ll~~A~~~~l 286 (806)
.+.+.+|+.||+++++
T Consensus 84 ~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 84 TEMSLELLLAADYLSI 99 (99)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 5667888999988764
No 80
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.73 E-value=0.0041 Score=65.90 Aligned_cols=70 Identities=13% Similarity=0.092 Sum_probs=51.5
Q ss_pred ceEEEecccC-------CceeEecCCCCcEEEeccCCCCCcC------CCCeEEeecccCCc--cccCCeeecCCCCeeE
Q 040529 638 GVLYFAGTSY-------GEHPWVNPVLAKRINITASSPISRY------TDPKALASRTYQGL--SFAGPRMEDGHNCTWW 702 (806)
Q Consensus 638 gvlY~iGg~~-------~sve~ynP~~~~w~~vt~s~~~~r~------~~~~~~v~~g~~g~--~~~~~~~y~~~~nsW~ 702 (806)
+.||++||.. .++++|||.+++|..+. ++|.+|. .++++|+.||+... .....+.||+.+++|.
T Consensus 110 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 188 (318)
T 2woz_A 110 DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK-NLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK 188 (318)
T ss_dssp TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC-CCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEE
T ss_pred CEEEEEcCccCCCCcccceEEEEeCCCCCEeECC-CCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEE
Confidence 3677777753 37899999999998885 4566663 45788999997432 2355677999999999
Q ss_pred EEecCC
Q 040529 703 MVDIGQ 708 (806)
Q Consensus 703 ~vd~~~ 708 (806)
.++..+
T Consensus 189 ~~~~~p 194 (318)
T 2woz_A 189 DLAPMK 194 (318)
T ss_dssp EECCCS
T ss_pred ECCCCC
Confidence 986433
No 81
>3hnm_A Putative chitobiase; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, BTR319D.BT_411; 3.00A {Bacteroides thetaiotaomicron}
Probab=96.72 E-value=0.005 Score=59.38 Aligned_cols=94 Identities=15% Similarity=0.215 Sum_probs=60.9
Q ss_pred CCeeEEEecCCceeeEeeeeEeeecCC----cccceEEEEEEecCCCCeEeeEEeecCcccccC-CccceeeecCCCCCc
Q 040529 698 NCTWWMVDIGQDHQLMCNYYTLRMDGS----RAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKH-GQFASWAVIGPNALR 772 (806)
Q Consensus 698 ~nsW~~vd~~~~~~~~p~~Y~~r~~~~----~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~-~~~~~~~i~~~~~~~ 772 (806)
.-.|+.||+|..+.+.--.|.-|..+. ...++.+.+++|+||++|+.+..-+ +... .....+..+ ..
T Consensus 63 ~P~~itIDLg~~~~v~~~~~~~r~~~~~~~~~g~ik~~~I~~S~Dg~~W~~v~~~~----~~~~~~~~~~~~~~----~~ 134 (172)
T 3hnm_A 63 LPYYFVFDMGKEYTLFRFGFANPVAPAAHVWAGTSKAGYVEASIDNENWVKLKDWT----SPKIGEPNVNMDVP----AT 134 (172)
T ss_dssp SCEEEEEEEEEEEEEEEEEEECCCSSCTTSTTCCEEEEEEEEESSSSCEEEEECCB----CSSTTCSCEEEEEE----EE
T ss_pred CCEEEEEECCCceEEeEEEEEecCCCCcccCCCCeEEEEEEEEeCCCCeEEeEEEE----ecCCCCceEEeecC----CC
Confidence 458999999987666666666676543 4679999999999999999876432 2222 222233332 23
Q ss_pred CeEEEEEEEeccCCCCCCCceEEEeceEEe
Q 040529 773 PFRFFRVVLMGPTADAANSWNFCICFLELY 802 (806)
Q Consensus 773 ~~r~fri~q~g~n~~~~~~~~l~l~~~e~~ 802 (806)
..||+||+.+.....-+ -|.++-=|+|
T Consensus 135 ~aRYIR~~v~~g~~~~~---~~rv~~~e~~ 161 (172)
T 3hnm_A 135 QARYIRFVITDTYPTYD---GLRVSLGEVY 161 (172)
T ss_dssp EEEEEEEEEEEECCCTT---SSCCEECEEE
T ss_pred ceEEEEEEEccCccccc---ceEEEhhHhh
Confidence 68999999996544332 2333334555
No 82
>4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A
Probab=96.67 E-value=0.0093 Score=71.22 Aligned_cols=94 Identities=16% Similarity=0.254 Sum_probs=62.9
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecCCcccceEEEEEEecCCCCeEeeEEeecCcccccCCccceeeecCCCCCcCeEE
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDGSRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPFRF 776 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~r~ 776 (806)
....|++||+|..+.| +.-.+. + .......+.+++|.||.+|+.+....+...-...+.+.++ . ....||
T Consensus 60 ~~~qWLqVDLG~~~~V--~~V~l~-~-~~~~v~~Y~Ie~S~DG~~Wt~v~~~t~~~~~~~~~d~v~f--~----pv~ARY 129 (914)
T 4a4a_A 60 NDYKWIEVDLGGIYEL--SKIEIF-N-KDEAVYKYNIYASEDGENFNKIAYKNNDNVSDSNGNMHTI--D----NVRAGK 129 (914)
T ss_dssp SSCCEEEEEEEEEEEE--EEEEEE-C-SSSSCEEEEEEEESSSSCCEEEEEECSCCCCCTTCEEEEE--E----EEEEEE
T ss_pred CCCceEEEECCCeEEE--EEEEEE-e-cCCceEEEEEEEEcCCCCeEEEEEcccCccCCCccceEEe--C----CceEEE
Confidence 5679999999986443 222332 2 2234679999999999999998765443321112244555 1 124899
Q ss_pred EEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 777 FRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 777 fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
+||..++... + ...+|.-||+||.
T Consensus 130 VRL~~t~~~~--~--~~~SI~EfeVyG~ 153 (914)
T 4a4a_A 130 IRIDVVQNSN--S--DRVNIAEINVFGK 153 (914)
T ss_dssp EEEEEEEETT--C--SSCEESEEEEEEE
T ss_pred EEEEEEecCC--C--CceEEEEEEEEcC
Confidence 9999986553 2 3679999999995
No 83
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.67 E-value=0.0019 Score=69.61 Aligned_cols=70 Identities=14% Similarity=0.112 Sum_probs=52.2
Q ss_pred eEEEeccc----------CCceeEecCCCCcEEEeccCCCCCcC------CCCeEEeecccCCcc---------------
Q 040529 639 VLYFAGTS----------YGEHPWVNPVLAKRINITASSPISRY------TDPKALASRTYQGLS--------------- 687 (806)
Q Consensus 639 vlY~iGg~----------~~sve~ynP~~~~w~~vt~s~~~~r~------~~~~~~v~~g~~g~~--------------- 687 (806)
.||++||. .+++++|||.+++|..+.+++|.+|. .++++|+.||+.+..
T Consensus 67 ~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~ 146 (357)
T 2uvk_A 67 NLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDS 146 (357)
T ss_dssp EEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCH
T ss_pred EEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcc
Confidence 56777665 24799999999999998766546664 456889999976542
Q ss_pred --------------------ccCCeeecCCCCeeEEEecCC
Q 040529 688 --------------------FAGPRMEDGHNCTWWMVDIGQ 708 (806)
Q Consensus 688 --------------------~~~~~~y~~~~nsW~~vd~~~ 708 (806)
....+.||+.+++|..+...+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p 187 (357)
T 2uvk_A 147 TAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESP 187 (357)
T ss_dssp HHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECS
T ss_pred cchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCC
Confidence 234567999999999986543
No 84
>2wuh_A Discoidin domain receptor 2; receptor-peptide complex, transferase, nucleotide-binding, tyrosine-protein kinase; 1.60A {Homo sapiens} PDB: 2z4f_A
Probab=96.53 E-value=0.0076 Score=58.49 Aligned_cols=95 Identities=18% Similarity=0.274 Sum_probs=56.8
Q ss_pred CeeEEEecCCceeeEeeeeEeeecC----CcccceEEEEEEecCCCCeEeeEEeecCcccccCC---ccceeeecCCCCC
Q 040529 699 CTWWMVDIGQDHQLMCNYYTLRMDG----SRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHG---QFASWAVIGPNAL 771 (806)
Q Consensus 699 nsW~~vd~~~~~~~~p~~Y~~r~~~----~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~---~~~~~~i~~~~~~ 771 (806)
++|++|||+..+.| +.-..+... .....++++++.|.||.+|+..........+.+.. ...+-.+. ..
T Consensus 72 ~qWLQVDLg~~~~V--tgV~tQG~~~~~~~~~~vt~Y~l~yS~Dg~~W~~y~~~~~~kvF~GN~D~~t~v~~~l~---~p 146 (178)
T 2wuh_A 72 KEFLQIDLHTLHFI--TLVGTQGRHAGGHGIEFAPMYKINYSRDGTRWISWRNRHGKQVLDGNSNPYDIFLKDLE---PP 146 (178)
T ss_dssp CCCEEEEEEEEEEE--EEEEEECCCGGGTCCCCCSEEEEEEESSSSSCEECCCTTSCCCEECCSSSSSCEEEEEE---EE
T ss_pred CCEEEEecCCceEE--eEEEEecccCCCCccceeEEEEEEEEcCCCcEEEEecCCccccccccCCCCceEEEeCC---CC
Confidence 79999999985333 333333222 23578999999999999999876432222232221 11122222 12
Q ss_pred cCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 772 RPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 772 ~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
-.-||+||.-+.-+.. ..+| .+|+||-
T Consensus 147 i~ARyVRi~p~~w~~~-----~i~l-RvElyGC 173 (178)
T 2wuh_A 147 IVARFVRFIPVTDHSM-----NVCM-RVELYGC 173 (178)
T ss_dssp EEEEEEEEEEECSSCB-----CCCB-EEEEEEE
T ss_pred eEEEEEEEEEEeecCC-----CeEE-EEEEecc
Confidence 2479999998754421 2343 3999994
No 85
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.43 E-value=0.0077 Score=58.91 Aligned_cols=95 Identities=15% Similarity=0.101 Sum_probs=73.5
Q ss_pred eEEEEEcCeeeEEEeeHHHHhcCC-HHHHHhhcCCC--CC--CCcceEEeCCCCHHHHHHHHhHHhcCccccCCCCchhH
Q 040529 349 DVNIYVESHGLVAQSHKIILSLWS-VPFAKMFTNGM--SE--SYSSDVHLRDVSLKAFKIMLEFMYSGELNIEDSLDFGS 423 (806)
Q Consensus 349 DV~l~v~~~~~~~~aHr~ILaa~S-~yF~~mf~~~~--~E--s~~~~I~l~~v~~~~f~~lL~fiYtg~l~i~~~~n~~~ 423 (806)
=|+|.|+|.. |...+..|.... .+|..||.+.. .. ....++.+ |-++..|+.||+|+.+|.+.+...-.
T Consensus 13 ~V~LNVGG~~--F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~~--- 86 (202)
T 3drx_A 13 WVRLNVGGTY--FLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLA--- 86 (202)
T ss_dssp EEEEEETTEE--EEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTSC---
T ss_pred EEEEEECCEE--EEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCCC---
Confidence 4678899864 999999998764 37889987642 11 12345655 56899999999999999998865433
Q ss_pred HHHHHHHHHHhhCchHHHHHHHHHHhh
Q 040529 424 LLLQLLILSDQFGVTLLHQECCKLLLE 450 (806)
Q Consensus 424 ~v~~Ll~~A~~l~l~~L~~~c~~~L~~ 450 (806)
...+++-|.+|+|+.|.+.|.+.|.+
T Consensus 87 -~~~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 87 -EEGVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp -HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 56799999999999999999888754
No 86
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=96.38 E-value=0.008 Score=71.40 Aligned_cols=98 Identities=10% Similarity=0.127 Sum_probs=65.9
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecCCcccceEEEEEEecCCCCeEeeEEeecCcccccCCccceeeecCCCCCcCeEE
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDGSRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPFRF 776 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~r~ 776 (806)
....|+.|||+..+.+.--.|.-|.++.....+.+.+++|.||.+|+.+.... ........+..+. ....||
T Consensus 637 ~~p~wl~VDLg~~~~V~~V~i~~r~~~~~g~v~~y~I~~S~DG~~W~~v~~gt----~~~~~~~~~v~f~----~v~ARY 708 (737)
T 2v5d_A 637 EGPHHLTLELDNVYEINKVKYAPRQDSKNGRITGYKVSVSLDGENFTEVKTGT----LEDNAAIKFIEFD----SVDAKY 708 (737)
T ss_dssp CCCCEEEEEEEEEEEEEEEEEECCSSCCTTEEEEEEEEEESSSSCCCCSEEEE----CCSSSSCEEEEEE----EEEEEE
T ss_pred CCCeEEEEECCCcEEEEEEEEEeccCCCCCceEEEEEEEEcCCCceEEEEeee----ecCCCceEEEEeC----CceEEE
Confidence 36789999999865554444444433334568999999999999998876432 2122233333443 135899
Q ss_pred EEEEEeccCC---CCCCCceEEEeceEEee
Q 040529 777 FRVVLMGPTA---DAANSWNFCICFLELYG 803 (806)
Q Consensus 777 fri~q~g~n~---~~~~~~~l~l~~~e~~G 803 (806)
+||..++... +|.+ ..++|+-|++||
T Consensus 709 VRi~~~~~~~~~~~G~~-~~~siaE~~VyG 737 (737)
T 2v5d_A 709 VRLDVTDSVSDQANGRG-KFATAAEVNVHG 737 (737)
T ss_dssp EEEEEEEEECSSSSCTT-TCCEESEEEEEC
T ss_pred EEEEEEeeccccccCCC-CcEEEEEEEEEC
Confidence 9999997643 2322 479999999998
No 87
>1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP: b.18.1.15
Probab=96.37 E-value=0.0079 Score=57.16 Aligned_cols=96 Identities=18% Similarity=0.139 Sum_probs=61.1
Q ss_pred ecCCCCeeEEEecCCceeeEeeeeEeeecCC--cccceEEEEEEecCCCC--e-EeeEEeecCcccccCCccceeeecCC
Q 040529 694 EDGHNCTWWMVDIGQDHQLMCNYYTLRMDGS--RAYIRYWNFQGSMDGKS--W-TNLRVHENDQTMCKHGQFASWAVIGP 768 (806)
Q Consensus 694 y~~~~nsW~~vd~~~~~~~~p~~Y~~r~~~~--~~~lr~W~~~gs~dg~~--W-~~l~~~~~~~~l~~~~~~~~~~i~~~ 768 (806)
+....+.|++||||..+.| +.-.|.+..+ ...++...++.++++.+ | ..+-... ... ..+...++.+.
T Consensus 53 T~~~~~~W~~VDLg~~~~V--~~V~i~~r~d~~~~r~~~~~i~v~~s~~~~~~~n~~~~~~--~~~-~~g~~~~i~~~-- 125 (158)
T 1k12_A 53 SSGQANPWWRVDLLQVYTI--TSVTITNRGDCCGERISGAEINIGQHLASNGVNNPECSVI--GSM-ATGETKTFHCP-- 125 (158)
T ss_dssp BCSCSSCEEEEEEEEEEEE--EEEEEEECSSSCTTTTTTCEEEEESSCTTTTTTSCEEEEC--CCC-CTTCEEEEEEE--
T ss_pred CCCCCCCEEEEECCCceEE--eEEEEEeCCCcCccccCCEEEEEEcCCccccccCceeeee--ccc-CCCCEEEEECC--
Confidence 4567899999999986443 4444444432 34577778887765443 5 3332211 112 23556677763
Q ss_pred CCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 769 NALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 769 ~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
....-||+||..+|. ..|+|+-||.||.
T Consensus 126 -~~~~gRYVrv~~~g~-------~~lsl~EveVyg~ 153 (158)
T 1k12_A 126 -APMIGRYVVTYLPTS-------ESLHLCEVEVNVD 153 (158)
T ss_dssp -EEEEEEEEEEECCSS-------SCCCEEEEEEEEE
T ss_pred -CCCeeEEEEEEECCC-------CeEEEEEEEEecc
Confidence 133689999999864 2688999999996
No 88
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.36 E-value=0.022 Score=67.56 Aligned_cols=65 Identities=12% Similarity=-0.002 Sum_probs=51.2
Q ss_pred eEEEeccc------CCceeEecCCCCcEEEeccCCCCCcC-------CCCeEEeecccCCccccCCeeecCCCCeeEEEe
Q 040529 639 VLYFAGTS------YGEHPWVNPVLAKRINITASSPISRY-------TDPKALASRTYQGLSFAGPRMEDGHNCTWWMVD 705 (806)
Q Consensus 639 vlY~iGg~------~~sve~ynP~~~~w~~vt~s~~~~r~-------~~~~~~v~~g~~g~~~~~~~~y~~~~nsW~~vd 705 (806)
.||++||. .++++.|||.+++|..+. ++|.+|. .++++|+.||+.+.. ..+.||+.+++|..+.
T Consensus 453 ~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~-~~p~~R~~h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 453 QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIK-SLSHTRFRHSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVT 529 (695)
T ss_dssp EEEEECCBSSTTCBCCCCEEEETTTTEEEECC-CCSBCCBSCEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECC
T ss_pred EEEEEcCCCCCCCccccEEEEeCCCCcEEECC-CCCCCcccceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEcc
Confidence 56777764 347999999999998874 5566663 378899999986655 6678999999999987
Q ss_pred c
Q 040529 706 I 706 (806)
Q Consensus 706 ~ 706 (806)
.
T Consensus 530 ~ 530 (695)
T 2zwa_A 530 P 530 (695)
T ss_dssp C
T ss_pred C
Confidence 4
No 89
>3bn6_A Lactadherin; anticoagulation, anti-coagulation, anticoagulant, anti- coagulant, membrane binding, phosphatidyl-serine binding; 1.67A {Bos taurus} PDB: 2pqs_A
Probab=96.36 E-value=0.0056 Score=58.20 Aligned_cols=94 Identities=15% Similarity=0.248 Sum_probs=56.5
Q ss_pred CCeeEEEecCCceeeEeeeeEeeecC--C-cccceEEEEEEecCCCCeEeeEEeec--CcccccC---CccceeeecCCC
Q 040529 698 NCTWWMVDIGQDHQLMCNYYTLRMDG--S-RAYIRYWNFQGSMDGKSWTNLRVHEN--DQTMCKH---GQFASWAVIGPN 769 (806)
Q Consensus 698 ~nsW~~vd~~~~~~~~p~~Y~~r~~~--~-~~~lr~W~~~gs~dg~~W~~l~~~~~--~~~l~~~---~~~~~~~i~~~~ 769 (806)
.+.|++|||+..+.| +.-.++... . ....+++.+++|.||.+|+.+....+ ...+.+. ....+-.+.
T Consensus 56 ~~qwlqVDLg~~~~v--t~v~tqg~~~~~~~~~v~~y~i~~S~Dg~~W~~~~~~~~~~~~~F~GN~d~~~~~~~~l~--- 130 (158)
T 3bn6_A 56 ASEWLQIDLGSQKRV--TGIITQGARDFGHIQYVAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMDNNSHKKNIFE--- 130 (158)
T ss_dssp TTCCEEEEEEEEEEE--EEEEEECEEETTEEEEEEEEEEEEESSSSSCEECCCTTCSSCCCEECCSSSSCCEEEEEE---
T ss_pred CCCEEEEeCCCceEE--EEEEeeCCCCCCCCceEEEEEEEEECCCCceEEEEcCCCCceeeeeccCCCCeEEEEeCC---
Confidence 578999999986444 333333222 1 24689999999999999998765311 1222211 111122222
Q ss_pred CCcCeEEEEEEEeccCCCCCCCceEEEeceEEee
Q 040529 770 ALRPFRFFRVVLMGPTADAANSWNFCICFLELYG 803 (806)
Q Consensus 770 ~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G 803 (806)
..-.-||+||.-+.-+ + ..+| .+|+||
T Consensus 131 ~pi~ARyVRi~p~~~~--~----~~~l-R~ElyG 157 (158)
T 3bn6_A 131 TPFQARFVRIQPVAWH--N----RITL-RVELLG 157 (158)
T ss_dssp EEEEEEEEEEEEEEEE--S----SCEE-EEEEEE
T ss_pred CCEEEEEEEEEEEEcC--C----eeEE-EEEEEc
Confidence 1224799999988654 2 2344 599999
No 90
>2v72_A CBM32, EXO-alpha-sialidase; galactose, bacterial pathogen, carbohydrate-binding module, sugar-binding protein; HET: GAL; 2.25A {Clostridium perfringens}
Probab=96.32 E-value=0.0093 Score=55.12 Aligned_cols=92 Identities=12% Similarity=0.117 Sum_probs=59.7
Q ss_pred CCeeEEEecCCceeeEeeeeEeeecCCcccceEEEEEEecCCCCeEeeEEeecCcccccCCccceeeecCCCCCcCeEEE
Q 040529 698 NCTWWMVDIGQDHQLMCNYYTLRMDGSRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPFRFF 777 (806)
Q Consensus 698 ~nsW~~vd~~~~~~~~p~~Y~~r~~~~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~r~f 777 (806)
.+.|+.|||+..+.+.--.+.-|..+....++.+.+++|.||.+ +.+.....+ ..+...+..+. .....||+
T Consensus 51 ~~~~l~vDLg~~~~i~~v~~~~~~~~~~~~~~~~~i~~S~Dg~~-~~v~~g~~~----~~~~~~~~~f~---~p~~aRyv 122 (143)
T 2v72_A 51 LPQSLSVNLGKARKVSSIAITPRTSGNNGFITKYEIHAINNGVE-TLVAEGTWE----ENNLVKTVTFD---SPIDAEEI 122 (143)
T ss_dssp SCEEEEEEEEEEEEEEEEEEECCSSCCTTCEEEEEEEEEETTEE-EEEEEEECC----SSSSCEEEEEE---EEEEEEEE
T ss_pred CCEEEEEECCCCeEEeEEEEEecccCCCCCEEEEEEEEEcCCCc-cEEeEEEEc----CCCceEEEEeC---CCCcEEEE
Confidence 67899999998655544444444333345689999999999987 654332211 11233344443 12368999
Q ss_pred EEEEeccCCCCCCCceEEEeceEEe
Q 040529 778 RVVLMGPTADAANSWNFCICFLELY 802 (806)
Q Consensus 778 ri~q~g~n~~~~~~~~l~l~~~e~~ 802 (806)
||.-++... . +++|+-|++|
T Consensus 123 Ri~~~~~~~--~---~~~i~Ei~v~ 142 (143)
T 2v72_A 123 KITAIQGVG--G---FASIAELNVY 142 (143)
T ss_dssp EEEEEEEGG--G---CCEESEEEEE
T ss_pred EEEEEEcCC--C---eEEEEEEEEE
Confidence 999987543 3 5888999987
No 91
>3lei_A Platelet aggregation factor SM-HPAF; lectin domain of lectinolysin, fucose, blood clotting, nicke; HET: FUC; 1.90A {Streptococcus mitis} PDB: 3leg_A* 3le0_A* 3lek_A*
Probab=96.31 E-value=0.014 Score=55.16 Aligned_cols=94 Identities=12% Similarity=0.224 Sum_probs=60.7
Q ss_pred ecCCCCeeEEEecCCceeeEeeeeEeeecCC---cccceEEEEEEe-cCCCCeEeeEEeecCcccccCCccceeeecCCC
Q 040529 694 EDGHNCTWWMVDIGQDHQLMCNYYTLRMDGS---RAYIRYWNFQGS-MDGKSWTNLRVHENDQTMCKHGQFASWAVIGPN 769 (806)
Q Consensus 694 y~~~~nsW~~vd~~~~~~~~p~~Y~~r~~~~---~~~lr~W~~~gs-~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~ 769 (806)
.+...+.|++||||..+.| +.-.|....+ ...++.+.++-+ .||.+|..... . .. ..+...+..+.
T Consensus 49 t~~~~~~W~~VDLg~~~~v--~~V~i~~~~d~~~~~r~~~~~I~vs~~dg~~w~~~~~--~--~~-~~~~~~~~~~~--- 118 (153)
T 3lei_A 49 TNFEDNAWWQVDLGKTENV--GKVKLYNRGDGNVANRLSNFDVVLLNEAKQEVARQHF--D--SL-NGKAELEVFFT--- 118 (153)
T ss_dssp CCSBTTCEEEEEEEEEEEE--EEEEEEECCSTTCGGGSCSEEEEEECTTCCEEEEEEE--S--CC-TTCSEEEEEEE---
T ss_pred CCCCCCCeEEEECCCceEE--eEEEEEeCCCCcccccceeEEEEEECCCCCcccccee--e--cC-CCCCeEEEEeC---
Confidence 4566889999999985433 4444544332 234788888554 57889986422 1 12 12233445543
Q ss_pred CCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 770 ALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 770 ~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
...-||+||..++.+. .++|+-||+||.
T Consensus 119 -~~~~RYVri~~~~~~~------~~sl~EveVyg~ 146 (153)
T 3lei_A 119 -AKDARYVKVELKTKNT------PLSLAEVEVFRS 146 (153)
T ss_dssp -EEEEEEEEEEECSTTB------CCCEEEEEEEEB
T ss_pred -CeEEEEEEEEeeCCCC------cEEEEEEEEEcC
Confidence 2358999999987642 578999999996
No 92
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=96.26 E-value=0.019 Score=66.76 Aligned_cols=96 Identities=17% Similarity=0.230 Sum_probs=64.9
Q ss_pred CCeeEEEecCCceeeEeeeeEeeecCCcccceEEEEEEecCCCCeEe-eEEeecCcccccCCccceeeecCCCCCcCeEE
Q 040529 698 NCTWWMVDIGQDHQLMCNYYTLRMDGSRAYIRYWNFQGSMDGKSWTN-LRVHENDQTMCKHGQFASWAVIGPNALRPFRF 776 (806)
Q Consensus 698 ~nsW~~vd~~~~~~~~p~~Y~~r~~~~~~~lr~W~~~gs~dg~~W~~-l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~r~ 776 (806)
...|+.|||+..+.|.--.|.-|.......++.+.+++|+||.+|+. +.... +.......+..+. ....||
T Consensus 504 ~~~~i~vDLg~~~~i~~v~~~~r~~~~~~~~~~y~i~~S~Dg~~w~~~v~~~~----~~~~~~~~~~~f~----~~~aRy 575 (601)
T 1w8o_A 504 YPHRISLDLGGTHTISGLQYTRRQNSANEQVADYEIYTSLNGTTWDGPVASGR----FTTSLAPQRAVFP----ARDARY 575 (601)
T ss_dssp SCEEEEEEEEEEEEEEEEEEEECSSCSTTCBCEEEEEEESSSSSCEEEEEEEE----CCSCSSCEEEEEE----EEEEEE
T ss_pred CCeEEEEECCCcEEEeEEEEecCCCCCCCceEEEEEEEECCCCccceeeeeEE----EcCCCceEEEEeC----CcceEE
Confidence 47899999998766654445444433345789999999999999995 54321 1111122333333 236899
Q ss_pred EEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 777 FRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 777 fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
+||..++.... + ..++|+-|++||.
T Consensus 576 vRi~~~~~~~~-~--~~~~i~Ei~v~g~ 600 (601)
T 1w8o_A 576 IRLVALSEQTG-H--KYAAVAELEVEGQ 600 (601)
T ss_dssp EEEEECCBTTS-C--SCCEEEEEEEEEC
T ss_pred EEEEEEEcCCC-C--ceEEEEEEEEEec
Confidence 99999976532 2 4799999999995
No 93
>3hny_M Coagulation factor VIII; blood clotting, acute phase, blood coagulation, calcium, DIS mutation, disulfide bond, glycoprotein, hemophilia; 1.07A {Homo sapiens} SCOP: b.18.1.2 PDB: 3hnb_M 3hob_M 1d7p_M 1iqd_C 1cfg_A 1fac_A
Probab=96.26 E-value=0.0074 Score=57.42 Aligned_cols=95 Identities=15% Similarity=0.201 Sum_probs=56.6
Q ss_pred CCCeeEEEecCCceeeEeeeeEeee--c-CCcccceEEEEEEecCCCCeEeeEEeecCcccccCC---ccceeeecCCCC
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRM--D-GSRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHG---QFASWAVIGPNA 770 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~--~-~~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~---~~~~~~i~~~~~ 770 (806)
..+.|++|||+..+.| +.-.... . ......+++++++|.||.+|+..........+.+.. ...+..+. .
T Consensus 56 d~~qwLqVDLg~~~~V--tgV~tqG~~~~~~~~~v~~y~l~yS~Dg~~W~~~~~~~~~~vF~GN~d~~t~v~~~l~---~ 130 (159)
T 3hny_M 56 NPKEWLQVDFQKTMKV--TGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNSLD---P 130 (159)
T ss_dssp STTCCEEEEEEEEEEE--EEEEEECEEETTEEEEEEEEEEEEESSSSSCEECEETTEECCEECCSSSSSCEEEEEE---E
T ss_pred CCCCeEEcccCCcEEE--EEEEeecCCCCCccceEEEEEEEEEECCCcEEEEecCCceEeeeccCCCCcEEEEECC---C
Confidence 4689999999985333 2222222 1 123568999999999999999876422222332221 11223332 1
Q ss_pred CcCeEEEEEEEeccCCCCCCCceEEEeceEEee
Q 040529 771 LRPFRFFRVVLMGPTADAANSWNFCICFLELYG 803 (806)
Q Consensus 771 ~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G 803 (806)
.-.-||+||.=+.-+. ..+|. +|+||
T Consensus 131 pi~ARyvRi~P~~w~~------~i~lR-~El~G 156 (159)
T 3hny_M 131 PLLTRYLRIHPQSWVH------QIALR-MEVLG 156 (159)
T ss_dssp EEEEEEEEEEEEEEES------SCCBE-EEEEE
T ss_pred CcEEEEEEEEEEEeCC------ccEEE-EEEEc
Confidence 2246999998876442 23333 99999
No 94
>1czt_A Protein (coagulation factor V); membrane-binding, discoidin family, calcium- independent, blood clotting; 1.87A {Homo sapiens} SCOP: b.18.1.2 PDB: 1czs_A 1czv_A
Probab=96.23 E-value=0.0066 Score=57.86 Aligned_cols=98 Identities=18% Similarity=0.250 Sum_probs=57.2
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecC-CcccceEEEEEEecCCCCeEeeEEeec--CcccccCCc---cceeeecCCCC
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDG-SRAYIRYWNFQGSMDGKSWTNLRVHEN--DQTMCKHGQ---FASWAVIGPNA 770 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~-~~~~lr~W~~~gs~dg~~W~~l~~~~~--~~~l~~~~~---~~~~~i~~~~~ 770 (806)
..++|++|||+..+.|.--...-+... .....++++++.|.||.+|+....... ...+.+... ..+-.+. .
T Consensus 54 ~~~qwLqVDLg~~~~Vt~v~tqG~~~~~~~~~v~~y~l~yS~Dg~~W~~~~~~~~~~~~vF~GN~d~~t~v~~~l~---~ 130 (160)
T 1czt_A 54 NNKQWLEIDLLKIKKITAIITQGCKSLSSEMYVKSYTIHYSEQGVEWKPYRLKSSMVDKIFEGNTNTKGHVKNFFN---P 130 (160)
T ss_dssp STTCCEEEEEEEEEEEEEEEEECEEETTEEEEEEEEEEEEESSSSSCEECCCTTCSSCCCEECCSSSSCCEEEEEE---E
T ss_pred CCCcEEEEeCCCcEEEEEEEEeCcCCCCcccEEEEEEEEEECCCCcEEEEEcCCCcccccccCcCCCCceEEEecC---C
Confidence 457999999998644432222222211 235689999999999999998754321 123322211 1122222 1
Q ss_pred CcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 771 LRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 771 ~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
.-.-||+||.-+.-+ + ..++ .+|+||-
T Consensus 131 pi~ARyvRi~p~~w~--~----~~~~-R~ElyGc 157 (160)
T 1czt_A 131 PIISRFIRVIPKTWN--Q----SITL-RLELFGC 157 (160)
T ss_dssp EEEEEEEEEEEEEEE--S----SCEE-EEEEEEE
T ss_pred CEEEEEEEEEEEEeC--C----ceEE-EEEEEeE
Confidence 224799999988654 2 2343 3999993
No 95
>4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor domain, heparin binding domain, angiogene protein binding-cytokine complex; 2.65A {Homo sapiens} PDB: 1kmx_A 1vgh_A 2vgh_A
Probab=96.17 E-value=0.0087 Score=59.90 Aligned_cols=96 Identities=15% Similarity=0.231 Sum_probs=56.3
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeec--C---CcccceEEEEEEecCCCCeEeeEEeecCcccccCCc---cceeeecCC
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMD--G---SRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQ---FASWAVIGP 768 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~--~---~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~---~~~~~i~~~ 768 (806)
..+.|++|||+..+.| +.-..+.. . .....+++++++|.||.+|+.+........+.+... ..+-.+.
T Consensus 52 d~~qWLQVDLg~~~~V--tgV~tQG~~~~~~~~~~~VtsY~l~yS~DG~~W~~y~~~~~~kvF~GN~D~~t~v~~~l~-- 127 (218)
T 4deq_A 52 SYREWIQVDLGLLRFV--TAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFP-- 127 (218)
T ss_dssp STTCCEEEEEEEEEEE--EEEEEECEECTTTCCEEEEEEEEEEEESSSSSCEECEETTEECCEECCSSSSSCEEEEEE--
T ss_pred CCCCeEEEeCCCcEEE--EEEEEEeccCCCCCccceEEEEEEEEEeCCCceEEeecceeeecccCcCCCCceEEEeCC--
Confidence 4679999999985433 33222222 1 124689999999999999998765322223322211 1122222
Q ss_pred CCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 769 NALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 769 ~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
..-.-||+||.=+.-+. ..+| .+|+||-
T Consensus 128 -~Pi~ARyVRi~P~~w~~------~i~l-RvElyGC 155 (218)
T 4deq_A 128 -KPLITRFVRIKPATWET------GISM-RFEVYGC 155 (218)
T ss_dssp -EEEEEEEEEEEEEEEES------SCCB-EEEEEEE
T ss_pred -CCEEEEEEEEEeeeecC------CcEE-EEEEEee
Confidence 12246999998875432 1233 4999993
No 96
>2j1v_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; HET: NAG GAL FUC; 1.45A {Streptococcus pneumoniae} PDB: 2j1r_A* 2j1t_A* 2j1u_A* 2j1s_A*
Probab=96.07 E-value=0.024 Score=53.38 Aligned_cols=94 Identities=14% Similarity=0.232 Sum_probs=62.3
Q ss_pred ecCCCCeeEEEecCCceeeEeeeeEeeecCC--cccceEEEEEEecCCCCeEeeEEeecCcccccCCccceeeecCCCCC
Q 040529 694 EDGHNCTWWMVDIGQDHQLMCNYYTLRMDGS--RAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNAL 771 (806)
Q Consensus 694 y~~~~nsW~~vd~~~~~~~~p~~Y~~r~~~~--~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~ 771 (806)
++...+.|++||||..+. -+.-.|.+..+ ...++...++.++++. |.....+... ..+...+..+. .
T Consensus 55 t~~~~~~W~~VDLg~~~~--V~~V~i~~r~d~~~~r~~~~~I~v~~~~~-~~~~~~~~~~----~~g~~~~~~~~----~ 123 (151)
T 2j1v_A 55 TRADNPSWWEVDLKKMDK--VGLVKIYNRTDAETQRLSNFDVILYDNNR-NEVAKKHVNN----LSGESVSLDFK----E 123 (151)
T ss_dssp CCSCTTCEEEEEEEEEEE--EEEEEEEECCSSCGGGSCSEEEEEECTTC-CEEEEEEECC----CSSSEEEEEEE----E
T ss_pred CCCCCCCEEEEECCCCeE--cCEEEEEcCCCccccccCCEEEEEECCCC-CceEeeEEcC----CCCCEEEEecC----C
Confidence 456788999999998533 35555555433 3457888999888764 5544323221 13445555553 2
Q ss_pred cCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 772 RPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 772 ~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
..-||+||..+|.. ..|+|+-||.||.
T Consensus 124 ~~gRYVrv~~~g~~------~~lsL~EveVyg~ 150 (151)
T 2j1v_A 124 KGARYIKVKLLTSG------VPLSLAEVEVFRE 150 (151)
T ss_dssp EEEEEEEEEESSTT------CCCCEEEEEECCC
T ss_pred eeEEEEEEEEECCC------CceEEEEEEEEcC
Confidence 35899999998642 3789999999985
No 97
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.07 E-value=0.0079 Score=70.86 Aligned_cols=67 Identities=15% Similarity=0.202 Sum_probs=52.5
Q ss_pred CceEEEecccC-CceeEecCCCCcEEEeccCCCCCcC-------CCCeEEeecc-cCCccc-cCCeeecCCCCeeEEE
Q 040529 637 NGVLYFAGTSY-GEHPWVNPVLAKRINITASSPISRY-------TDPKALASRT-YQGLSF-AGPRMEDGHNCTWWMV 704 (806)
Q Consensus 637 ~gvlY~iGg~~-~sve~ynP~~~~w~~vt~s~~~~r~-------~~~~~~v~~g-~~g~~~-~~~~~y~~~~nsW~~v 704 (806)
+|.||++||.. .+++.|||.+++|..+. +|+.+|. .++++|++|| +++... ...++||+.+++|..+
T Consensus 253 ~g~lyv~GG~~~~~v~~yd~~t~~W~~~~-~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 253 NGQIVVTGGNDAKKTSLYDSSSDSWIPGP-DMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp TSCEEEECSSSTTCEEEEEGGGTEEEECC-CCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred CCCEEEeCCCCCCceEEecCcCCceeECC-CCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 45788888854 48999999999998874 5666762 2789999999 555433 5567899999999987
No 98
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.89 E-value=0.009 Score=64.26 Aligned_cols=70 Identities=13% Similarity=0.047 Sum_probs=50.8
Q ss_pred ceEEEecccC-CceeEecCCC--CcEEEeccCCCCCcC------CCCeEEeeccc-C---C--ccccCCeeecCCCCeeE
Q 040529 638 GVLYFAGTSY-GEHPWVNPVL--AKRINITASSPISRY------TDPKALASRTY-Q---G--LSFAGPRMEDGHNCTWW 702 (806)
Q Consensus 638 gvlY~iGg~~-~sve~ynP~~--~~w~~vt~s~~~~r~------~~~~~~v~~g~-~---g--~~~~~~~~y~~~~nsW~ 702 (806)
+.||++||.. ..+..|||.+ ++|..+++++..+|. .++++|+.||+ . + ......++||+.+++|.
T Consensus 20 ~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~ 99 (357)
T 2uvk_A 20 DTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWV 99 (357)
T ss_dssp TEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEE
T ss_pred CEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEE
Confidence 3788888864 4799999984 889888654325663 35678999997 3 1 12355677999999999
Q ss_pred EEecC
Q 040529 703 MVDIG 707 (806)
Q Consensus 703 ~vd~~ 707 (806)
.++..
T Consensus 100 ~~~~~ 104 (357)
T 2uvk_A 100 KLMSH 104 (357)
T ss_dssp ECSCC
T ss_pred ECCCC
Confidence 98653
No 99
>2j22_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; 1.8A {Streptococcus pneumoniae}
Probab=95.48 E-value=0.035 Score=52.02 Aligned_cols=92 Identities=15% Similarity=0.212 Sum_probs=58.9
Q ss_pred ecCCCCeeEEEecCCceeeEeeeeEeeecCC--cccceEEEEEE--ecCCCCeEeeEEeecCcccccCCccceeeecCCC
Q 040529 694 EDGHNCTWWMVDIGQDHQLMCNYYTLRMDGS--RAYIRYWNFQG--SMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPN 769 (806)
Q Consensus 694 y~~~~nsW~~vd~~~~~~~~p~~Y~~r~~~~--~~~lr~W~~~g--s~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~ 769 (806)
+....+.|++||||..+. .+.-.|.+..+ ...++...++- |.|+..|.. +.. ...+...++.+.
T Consensus 52 T~~~~~~Ww~VDLg~~~~--V~~V~i~~r~d~~~~r~~~~~I~vg~s~d~~~~~~---~~~----~~~~~~~~~~~~--- 119 (148)
T 2j22_A 52 TKEDSPSWWEIDLAQTEE--LEKLIIYNRTDAEIQRLSNFDIIIYDSNDYEVFTQ---HID----SLESNNLSIDLK--- 119 (148)
T ss_dssp CCSCTTCEEEEEEEEEEE--EEEEEEEECCSSCGGGSEEEEEEEECTTSCEEEEE---EEE----ECSSSEEEEEEE---
T ss_pred cCCCCCCEEEEECCCCEE--eeEEEEEecCCCcccccCCEEEEEEeCCCCCcccc---eec----CCCCCEEEEEeC---
Confidence 456789999999998543 34555555433 24467777654 556666642 111 113445666664
Q ss_pred CCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 770 ALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 770 ~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
...-||+||..+|.. ..|+|+-||.||.
T Consensus 120 -~~~gRYVrv~~~g~~------~~lsL~EveVyg~ 147 (148)
T 2j22_A 120 -GLKGKKVRISLRSAG------IPLSLAEVEVYTY 147 (148)
T ss_dssp -EEEEEEEEEEESSTT------CCCCEEEEEEEEC
T ss_pred -CeeEEEEEEEEECCC------CceEEEEEEEEec
Confidence 225899999997642 4789999999995
No 100
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.47 E-value=0.04 Score=64.72 Aligned_cols=96 Identities=16% Similarity=0.160 Sum_probs=65.6
Q ss_pred CCeeEEEecCCceeeEeeeeEeeecC-CcccceEEEEEEecCCCCe-EeeEEeecCcccccCCccceeeecCCCCCcCeE
Q 040529 698 NCTWWMVDIGQDHQLMCNYYTLRMDG-SRAYIRYWNFQGSMDGKSW-TNLRVHENDQTMCKHGQFASWAVIGPNALRPFR 775 (806)
Q Consensus 698 ~nsW~~vd~~~~~~~~p~~Y~~r~~~-~~~~lr~W~~~gs~dg~~W-~~l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~r 775 (806)
...|+.|||+..+.|.--.|.-|..+ ....++.+.+++|.||++| +.+.....+. .+...+..+. ....|
T Consensus 68 ~~~~l~vDLg~~~~i~~v~~~~~~~~~~~~~~~~y~i~~S~Dg~~w~~~v~~~~~~~----~~~~~~~~~~----~~~aR 139 (656)
T 1k3i_A 68 PPHTYTIDMKTTQNVNGLSMLPRQDGNQNGWIGRHEVYLSSDGTNWGSPVASGSWFA----DSTTKYSNFE----TRPAR 139 (656)
T ss_dssp SCEEEEEEEEEEEEEEEEEEECCCSSCCTTCBCEEEEEEESSSSCCCSCSEEEECCS----SSSCEEEEEE----EEEEE
T ss_pred CCceEEecCCCcEEEEEEEEEecccCCCCCCeeEEEEEEECCCCCcceeeeeeeecC----CCcceeeecC----CcceE
Confidence 56899999998655554445545443 2356899999999999999 7665433222 2222334443 23589
Q ss_pred EEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 776 FFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 776 ~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
|+||.-++..... .++.|.-|++||.
T Consensus 140 yvRi~~~~~~~~~---~~~si~E~~v~~~ 165 (656)
T 1k3i_A 140 YVRLVAITEANGQ---PWTSIAEINVFQA 165 (656)
T ss_dssp EEEEEECSBTTSC---SCCEESEEEEEEC
T ss_pred EEEEEEecccccC---CceeEEEEEEeec
Confidence 9999999875543 3688999999985
No 101
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=95.27 E-value=0.0073 Score=53.75 Aligned_cols=75 Identities=8% Similarity=0.041 Sum_probs=56.6
Q ss_pred cEEEEecCCCeEEEeeeeeecccCcccCCC---------CCCceEEeCCCCHHHHHHHHHhhccCc-----------ccC
Q 040529 210 DMFFIVGTEEKLVPAHKVILQASGNFPLSL---------TGEGIVQLQEVIYPILHALLQFIYTGR-----------TQI 269 (806)
Q Consensus 210 Dv~~~v~~~~~~~~aHk~ILaarS~~F~~~---------~~~~~i~l~~v~~~~f~~lL~fiYtg~-----------~~i 269 (806)
-|+|+.. +|+.|.+++. .|..|..++.+ .....|.|++|+..+++.+++|++... ..+
T Consensus 18 ~v~L~Ss-DG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~v 95 (112)
T 1vcb_B 18 YVKLISS-DGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 95 (112)
T ss_dssp EEEEECT-TSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCC
T ss_pred EEEEEcC-CCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCccc
Confidence 3777766 4999999999 46778887432 122589999999999999999998543 235
Q ss_pred CCCCchhHHHhhhhccc
Q 040529 270 SEPLLGPLWALSSQFQV 286 (806)
Q Consensus 270 ~~~~~~~ll~~A~~~~l 286 (806)
..+.+.+|+.||++|++
T Consensus 96 d~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 96 APEIALELLMAANFLDC 112 (112)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 56678899999988764
No 102
>2w1s_A Hyaluronoglucosaminidase; hexosaminidase, family 32 carbohydrate binding module, toxin, secreted, virulence, hydrolase, glycosidase; HET: MSE BTB; 1.45A {Clostridium perfringens} PDB: 2w1q_A* 2w1u_A* 2wdb_A*
Probab=95.02 E-value=0.14 Score=50.18 Aligned_cols=81 Identities=15% Similarity=0.220 Sum_probs=49.4
Q ss_pred CCCCeeEEEecCCceeeEeeee-EeeecCC---cccceEEEEEEecCCCCeEeeEEeecCcccccCC-ccceeeecCCCC
Q 040529 696 GHNCTWWMVDIGQDHQLMCNYY-TLRMDGS---RAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHG-QFASWAVIGPNA 770 (806)
Q Consensus 696 ~~~nsW~~vd~~~~~~~~p~~Y-~~r~~~~---~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~-~~~~~~i~~~~~ 770 (806)
...+.|++|||+..+.| +.- ..+-.+. ....+++.+++|.||.+|+.+..... .-+... ...+-.+. .
T Consensus 62 ~~~~qwLQVDLg~~~~V--tgV~~tQG~~~~~~~~~vt~Y~l~yS~DG~~W~~~~~~~~--~GN~d~~t~v~~~f~---~ 134 (192)
T 2w1s_A 62 SLAGEFIGLDLGKEIKL--DGIRFVIGKNGGGSSDKWNKFKLEYSLDNESWTTIKEYDK--TGAPAGKDVIEESFE---T 134 (192)
T ss_dssp BCTTCEEEEEEEEEEEE--EEEEEEECCSSTTTTCCCSEEEEEEESSSSSCEEEEEEEC--TTCCSSCEEEEEEEE---E
T ss_pred CCCCceEEEECCCeEEE--EEEEEEcCCCCCCCCCeEEEEEEEEEcCCCCeEEEecCCc--cCCcCCCcEEEEecC---C
Confidence 35689999999985443 232 2222222 35678999999999999998865432 011111 11222222 1
Q ss_pred CcCeEEEEEEEec
Q 040529 771 LRPFRFFRVVLMG 783 (806)
Q Consensus 771 ~~~~r~fri~q~g 783 (806)
....||+||.-+.
T Consensus 135 pi~ARYVRi~p~~ 147 (192)
T 2w1s_A 135 PISAKYIRLTNME 147 (192)
T ss_dssp EEEEEEEEEEECS
T ss_pred CceEEEEEEEEee
Confidence 2258999999987
No 103
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=94.96 E-value=0.059 Score=57.33 Aligned_cols=96 Identities=16% Similarity=0.226 Sum_probs=57.5
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecCC-----cccceEEEEEEecCCCCeEeeEEeecCcccccCCc---cceeeecCC
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDGS-----RAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQ---FASWAVIGP 768 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~~-----~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~---~~~~~i~~~ 768 (806)
..++|++|||+..+.| +.-.++.... ....+++++++|.||.+|+.+........+.+... ..+-.+.
T Consensus 53 ~~~qwlqVDLg~~~~v--~~v~tqg~~~~~~~~~~~v~~y~i~~S~Dg~~W~~~~~~~~~~~f~GN~d~~~~v~~~l~-- 128 (318)
T 2qqi_A 53 SYREWIQVDLGLLRFV--TAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFP-- 128 (318)
T ss_dssp CTTCCEEEEEEEEEEE--EEEEEECEECTTTCCEEEEEEEEEEEESSSSSCEECEETTEECCEECCSSSSSCEEEEEE--
T ss_pred CCCceEEEccCCcEEE--EeeeeeccccCCCCccEeEEEEEEEEecCCCeEEEEeCCCeeEEEECCcCCCceeEeccC--
Confidence 4689999999985333 3333332211 24689999999999999998865322222222111 1122222
Q ss_pred CCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 769 NALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 769 ~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
..-.-||+||.-+.-+. ..+| .||+||-
T Consensus 129 -~pi~aRyVRi~p~~~~~------~~~l-r~ElyGc 156 (318)
T 2qqi_A 129 -KPLITRFVRIKPATWET------GISM-RFEVYGC 156 (318)
T ss_dssp -EEEEEEEEEEEEEEEES------SCCB-EEEEEEE
T ss_pred -CCeeEEEEEEEEeeccc------eeEE-EEEeccc
Confidence 12247999999886542 2334 6899994
No 104
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=94.81 E-value=0.094 Score=55.91 Aligned_cols=97 Identities=19% Similarity=0.309 Sum_probs=57.9
Q ss_pred CCCCeeEEEecCCceeeEeeeeEeeecC---------CcccceEEEEEEecCCCCeEeeEEeecC--cccccCCc--c-c
Q 040529 696 GHNCTWWMVDIGQDHQLMCNYYTLRMDG---------SRAYIRYWNFQGSMDGKSWTNLRVHEND--QTMCKHGQ--F-A 761 (806)
Q Consensus 696 ~~~nsW~~vd~~~~~~~~p~~Y~~r~~~---------~~~~lr~W~~~gs~dg~~W~~l~~~~~~--~~l~~~~~--~-~ 761 (806)
+..+.|++|||+..+.| +.-.++... .....+++.+++|.||.+|+.+...... ..+.+... + .
T Consensus 212 ~~~~qwLqVDLg~~~~V--t~V~tqG~~~~~~~~~~~~~~~vt~Y~l~yS~dg~~W~~~~~~~~~~~~vF~GN~d~~t~v 289 (325)
T 2qqj_A 212 QPGEEWLQVDLGTPKTV--KGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGKDWEYIQDPRTQQPKLFEGNMHYDTPD 289 (325)
T ss_dssp CTTTCCEEEEEEEEEEE--EEEEEECBCCC----CCCCCBCEEEEEEEEESSSSSCEECEETTTTEECCEECCSSSSSCE
T ss_pred CCccceeEeccCCceeE--EEEEecCCCCCCCccccCcceeEEEEEEEEEeCCCCeEEEecCCCCccceeecccCCCCeE
Confidence 35789999999986444 333343322 2356889999999999999987643211 22222111 1 1
Q ss_pred eeeecCCCCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 762 SWAVIGPNALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 762 ~~~i~~~~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
+-.+. | -.-||+||.-+.-+..+ .++ .+|+||-
T Consensus 290 ~~~l~-p---i~ARyVRi~p~~w~~~~-----i~m-R~El~Gc 322 (325)
T 2qqj_A 290 IRRFD-P---IPAQYVRVYPERWSPAG-----IGM-RLEVLGC 322 (325)
T ss_dssp EEEEE-E---EEEEEEEEEEEEECTTC-----CCB-EEEEEEE
T ss_pred EeecC-C---EEEEEEEEEeeeeecCC-----eEE-EEEEeee
Confidence 11111 1 24799999988655322 232 3999993
No 105
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=94.77 E-value=0.07 Score=56.89 Aligned_cols=96 Identities=19% Similarity=0.234 Sum_probs=57.5
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecC-----CcccceEEEEEEecCCCCeEeeEEeecCcccccCCc---cceeeecCC
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDG-----SRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQ---FASWAVIGP 768 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~-----~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~---~~~~~i~~~ 768 (806)
..++|++|||+..+.| +.-.++... .....+++++++|.||.+|+.+....+...+.+... ..+-.+.
T Consensus 54 ~~~qwlqvDLg~~~~v--t~v~tqg~~~~~~~~~~~v~~y~l~~S~dg~~W~~~~~~~~~~~f~Gn~d~~~~v~~~l~-- 129 (325)
T 2qqj_A 54 SNKEYLQVDLRFLTML--TAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVLNKLH-- 129 (325)
T ss_dssp STTCCEEEEEEEEEEE--EEEEEECEECTTTCCEEEEEEEEEEEESSSSSCEECEETTEECCEECCSSSSCCEEEEEE--
T ss_pred CcCccEEEeccceEEE--EEEEeeCCcCCCCCcceeEEEEEEEEEcCCcEeEEeeCCCccEEEeccCCCCeeEEEecC--
Confidence 3579999999985433 333333221 124688999999999999998765332233322211 1222222
Q ss_pred CCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 769 NALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 769 ~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
..-.-||+||.-+.-+.. .++ .+|+||-
T Consensus 130 -~pi~aRyvRi~p~~~~~~------~~~-R~ElyGc 157 (325)
T 2qqj_A 130 -APLLTRFVRIRPQTWHSG------IAL-RLELFGC 157 (325)
T ss_dssp -EEEEEEEEEEEEEEEESS------CCB-EEEEEEE
T ss_pred -CceEEEEEeecCcccccc------cee-eeeeeee
Confidence 122479999998865431 222 4899984
No 106
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=94.63 E-value=0.077 Score=56.39 Aligned_cols=96 Identities=14% Similarity=0.275 Sum_probs=56.5
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecCC---cccceEEEEEEecCCCCeEeeEEeec--CcccccCCc--c-ceeeecCC
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDGS---RAYIRYWNFQGSMDGKSWTNLRVHEN--DQTMCKHGQ--F-ASWAVIGP 768 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~~---~~~lr~W~~~gs~dg~~W~~l~~~~~--~~~l~~~~~--~-~~~~i~~~ 768 (806)
..+.|++|||+..+.| +.-.++..+. ....+++.+++|.||.+|+.+....+ ...+.+... + .+-.+.
T Consensus 212 ~~~qwLqVDLg~~~~V--t~V~tqg~~~~~~~~~v~~Y~l~~S~dg~~W~~~~~~~~~~~~~F~GN~d~~t~~~~~~~-- 287 (318)
T 2qqi_A 212 YINEWLQIDLGEEKIV--RGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSFEGNNNYDTPELRTFP-- 287 (318)
T ss_dssp CSCCCEEEEEEEEEEE--EEEEEEECCCTTCCCCCCCEEEEEESSSSSCEECBCTTSSSBCCBCCCSSSSCCEEEEEE--
T ss_pred CcCcEEEEeCCCceEE--EEEEEcCccCCCCCeEEEEEEEEEECCCCCEEEEEcCCCccccccccccCCCceEEeeCC--
Confidence 3578999999986444 3333443322 35689999999999999998764321 122222111 1 111111
Q ss_pred CCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 769 NALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 769 ~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
.-.-||+||.-+.. ..+ ..++ .+|+||-
T Consensus 288 --pi~ARyVRi~p~~~-~~~----~i~l-R~ElyGc 315 (318)
T 2qqi_A 288 --ALSTRFIRIYPERA-THG----GLGL-RMELLGC 315 (318)
T ss_dssp --EEEEEEEEEEECCC-SSS----CBCE-EEEEEEE
T ss_pred --CEEEEEEEEEEEee-cCC----CeEE-EEEEEee
Confidence 12479999997742 222 2343 4999994
No 107
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=94.59 E-value=0.038 Score=58.06 Aligned_cols=93 Identities=16% Similarity=0.244 Sum_probs=62.6
Q ss_pred cCCCCeeEEEecCCceeeEeeeeEeeec-CCcccceEEEEEEec--C---CCCeEeeEEeecCcccccCCccceeeecCC
Q 040529 695 DGHNCTWWMVDIGQDHQLMCNYYTLRMD-GSRAYIRYWNFQGSM--D---GKSWTNLRVHENDQTMCKHGQFASWAVIGP 768 (806)
Q Consensus 695 ~~~~nsW~~vd~~~~~~~~p~~Y~~r~~-~~~~~lr~W~~~gs~--d---g~~W~~l~~~~~~~~l~~~~~~~~~~i~~~ 768 (806)
+...+.|++||||..+.| +.-.|... .....++.+.+++|+ | +.+|.....+. . ..+++.++.+.
T Consensus 192 ~~~~~~W~~VDLg~~~~v--~~V~i~~~d~~~~~~~~~~i~vs~s~~~~~~~n~~~~~~~~----~-~~~~~~~~~~~-- 262 (293)
T 3cqo_A 192 KNTMDPWWRMDLSQTHRV--FSVKVTNRDSFEKRINGAEIRIGDSLDNNGNHNPRCAVITS----I-PAGASTEFQCN-- 262 (293)
T ss_dssp CSEESCEEEEEEEEEEEE--EEEEEECCSSSGGGGTTEEEEEESCCGGGGTTSCEEEEECC----C-CTTCEEEEEEE--
T ss_pred CCCCCCEEEEECCCeEEE--eEEEEEccCccccccCCeEEEEeccCccccccCceeeeecc----c-CCCCEEEEEcC--
Confidence 444688999999986544 44444444 223458899999964 5 56887654332 2 23456677664
Q ss_pred CCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 769 NALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 769 ~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
...-||+||..++.+ ..++|+-||+||.
T Consensus 263 --~~~~RYVrv~~~~~~------~~~sl~EveVyg~ 290 (293)
T 3cqo_A 263 --GMDGRYVNIVIPGRE------EYLTLCEVEVYGS 290 (293)
T ss_dssp --EEEEEEEEEECTTSE------ECCCCSEEEEEEE
T ss_pred --CeeEEEEEEEecCCC------ccEEEEEEEEecc
Confidence 235899999988752 2588999999996
No 108
>4ag4_A Epithelial discoidin domain-containing receptor 1; immune system-transferase complex; HET: NAG; 2.80A {Homo sapiens}
Probab=94.55 E-value=0.066 Score=57.27 Aligned_cols=98 Identities=15% Similarity=0.248 Sum_probs=56.6
Q ss_pred CCCCeeEEEecCCceeeEeeeeEeeecC----CcccceEEEEEEecCCCCeEeeEEeecCcccccCCc---cceeeecCC
Q 040529 696 GHNCTWWMVDIGQDHQLMCNYYTLRMDG----SRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQ---FASWAVIGP 768 (806)
Q Consensus 696 ~~~nsW~~vd~~~~~~~~p~~Y~~r~~~----~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~---~~~~~i~~~ 768 (806)
+..++|++||++..+.| +.-..+... .....+++++++|.||.+|+.......+..+.++.. ..+-.+.
T Consensus 56 ~d~~qWLQVDLg~~~~V--tgV~TQGr~~~g~~~~wVtsY~l~yS~DG~~W~~y~d~~~~kvF~GN~D~~t~v~n~l~-- 131 (351)
T 4ag4_A 56 PKEEEYLQVDLQRLHLV--ALVGTQGRHAGGLGKEFSRSYRLRYSRDGRRWMGWKDRWGQEVISGNEDPEGVVLKDLG-- 131 (351)
T ss_dssp SSCCCCEEEEEEEEEEE--EEEEEECBCGGGTCCBCCSEEEEEEESSSSCEEECCCTTSCCCEECCSSSSCCEEEEEE--
T ss_pred CCCCCEEEecCCCeEEE--EEEEEecccCCCCccceEEEEEEEEEeCCCcEEEEECCCccccccccCCCCceEEEeCC--
Confidence 35789999999985333 322222221 135689999999999999998754322333322211 1222232
Q ss_pred CCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 769 NALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 769 ~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
..-.-||+||.=+.- ... ..|| .+|+||-
T Consensus 132 -~PI~ARyVRi~P~~w--~~~---~i~L-RvELyGC 160 (351)
T 4ag4_A 132 -PPMVARLVRFYPRAD--RVM---SVCL-RVELYGC 160 (351)
T ss_dssp -EEEEEEEEEEEEECS--SSC---CCCB-EEEEEEE
T ss_pred -CCcEEEEEEEEEEEc--cCC---ceEE-EEEEecc
Confidence 122469999988742 111 2232 3899983
No 109
>2vm9_A Discoidin-2, discoidin II; DDR, lectin, aggregation, cell adhesion; 1.75A {Dictyostelium discoideum} PDB: 2vmc_A* 2vmd_A* 2vme_A*
Probab=94.31 E-value=0.083 Score=54.27 Aligned_cols=94 Identities=7% Similarity=0.116 Sum_probs=56.8
Q ss_pred CCCCeeEEEecCCceeeEeeeeEeeecC-CcccceEEEEEEecCCCCeEeeEEeecCcccccCC---ccceeeecCCCCC
Q 040529 696 GHNCTWWMVDIGQDHQLMCNYYTLRMDG-SRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHG---QFASWAVIGPNAL 771 (806)
Q Consensus 696 ~~~nsW~~vd~~~~~~~~p~~Y~~r~~~-~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~---~~~~~~i~~~~~~ 771 (806)
+..++|++|||+..+.+ +.-..+..+ .....+++++++|.||.+|+..... ..+.+.. ...+-.+. ..
T Consensus 57 ~d~~qwLqVDLg~~~~V--t~V~tQG~~~~~~~vt~Y~l~yS~Dg~~W~~y~~~---~vF~GN~d~~t~v~~~l~---~p 128 (257)
T 2vm9_A 57 LDKNQFIVAGSDSVKHF--VAISTQGRGDHDQWVTSYKLRYTLDNVNWVEYNNG---EIINANKDRNSIVTINFN---PP 128 (257)
T ss_dssp CSTTCCEEEEEEEEEEE--EEEEEECCSSSSCEEEEEEEEEESSSSCEEEGGGG---CCEECCSSSSCCEEEEEE---EE
T ss_pred CCCCcEEeecCCCcEEE--EEEEEeCCccCCceEEEEEEEEEcCCCcEEEEcCC---ceecccCCCCceEEEeCC---CC
Confidence 34689999999985333 333333332 3356899999999999999986531 1221111 11122222 12
Q ss_pred cCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 772 RPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 772 ~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
-.-||+||.-+.-+ + ..|| .+|+||-
T Consensus 129 i~ARyVRi~p~~w~--~----~i~l-R~El~Gc 154 (257)
T 2vm9_A 129 IKARSIAIHPQTYN--N----HISL-RWELYAL 154 (257)
T ss_dssp EEEEEEEEEEEEEE--S----SCEE-EEEEEEC
T ss_pred ceEEEEEeeeeeec--C----ceEE-EEEeccC
Confidence 24799999988654 2 2344 3999994
No 110
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=94.24 E-value=0.091 Score=51.34 Aligned_cols=86 Identities=13% Similarity=0.203 Sum_probs=67.7
Q ss_pred EEEEecCCCeEEEeeeeeecccCc-ccC----CC-------CCCceEEeCCCCHHHHHHHHHhhccCcccCCCCC-chhH
Q 040529 211 MFFIVGTEEKLVPAHKVILQASGN-FPL----SL-------TGEGIVQLQEVIYPILHALLQFIYTGRTQISEPL-LGPL 277 (806)
Q Consensus 211 v~~~v~~~~~~~~aHk~ILaarS~-~F~----~~-------~~~~~i~l~~v~~~~f~~lL~fiYtg~~~i~~~~-~~~l 277 (806)
|+|.|| |+.|..-+..|..... +|. .. ....++.+ |-+|..|..+|+|+-+|.+.++.+. ...+
T Consensus 14 V~LNVG--G~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~~~~~l 90 (202)
T 3drx_A 14 VRLNVG--GTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGV 90 (202)
T ss_dssp EEEEET--TEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTSCHHHH
T ss_pred EEEEEC--CEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCCCHHHH
Confidence 778897 8999999999986543 331 11 12345655 5799999999999999999887554 3789
Q ss_pred HHhhhhccchhhHHHHHHHHHh
Q 040529 278 WALSSQFQVMPLVKQCEETMER 299 (806)
Q Consensus 278 l~~A~~~~l~~L~~~C~~~l~~ 299 (806)
+.-|.+|++..|++.|.+.+..
T Consensus 91 ~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 91 LEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHCCcHHHHHHHHHHHHH
Confidence 9999999999999999998863
No 111
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=93.55 E-value=0.095 Score=54.96 Aligned_cols=95 Identities=17% Similarity=0.252 Sum_probs=58.1
Q ss_pred ecCCCCeeEEEecCCceeeEeeeeEeeecCC--cccceE--EEEEEecCCCCe---EeeEEeecCcccccCCccceeeec
Q 040529 694 EDGHNCTWWMVDIGQDHQLMCNYYTLRMDGS--RAYIRY--WNFQGSMDGKSW---TNLRVHENDQTMCKHGQFASWAVI 766 (806)
Q Consensus 694 y~~~~nsW~~vd~~~~~~~~p~~Y~~r~~~~--~~~lr~--W~~~gs~dg~~W---~~l~~~~~~~~l~~~~~~~~~~i~ 766 (806)
++...+.|++|||+..+.| +.-.|.+..+ ...++. ..++.|.|+..| .....+ .. ..+...++.++
T Consensus 45 t~~~~~~W~~VDLg~~~~v--~~V~i~~r~d~~~~~~~~~~i~v~~s~d~~~~~n~~~~~~~----~~-~~g~~~~~~~~ 117 (293)
T 3cqo_A 45 TVEQTNPWWRVDLLEPYIV--TSITITNRGDCCPERLNGVEIHIGNSLQENGVANPRVGVIS----HI-PAGISHTISFT 117 (293)
T ss_dssp BCSBSSCEEEEEEEEEEEE--EEEEEECCSSSCGGGGTTEEEEEESCCGGGGTTSCEEEEES----CC-CTTCEEEEECS
T ss_pred CCCCCCCEEEEECCCceEE--EEEEEEeCCCCccccccCeEEEEecCCccCCccCceeccee----ec-CCCceEEEEeC
Confidence 4567889999999985443 5555554432 222333 445566666533 322211 12 24556677774
Q ss_pred CCCCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 767 GPNALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 767 ~~~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
....-||+||..+|.+ ..++|+-||+||.
T Consensus 118 ---~~~~gRYVrv~~~~~~------~~~sl~EveVyg~ 146 (293)
T 3cqo_A 118 ---ERVEGRYVTVLLPGTN------KVLTLCEVEVHGY 146 (293)
T ss_dssp ---SCCEEEEEEEECCSSS------BCCCCSEEEEEEE
T ss_pred ---CCceeeEEEEEecCCC------cceEEEEEEEEec
Confidence 2235799999988753 2578999999995
No 112
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=93.43 E-value=0.16 Score=45.83 Aligned_cols=83 Identities=11% Similarity=0.100 Sum_probs=62.4
Q ss_pred cEEEEecCCCeEEEeeeeeecccCccc-CC-------CCCCceEEeCCCCHHHHHHHHHhhccCcccCCCC-CchhHHHh
Q 040529 210 DMFFIVGTEEKLVPAHKVILQASGNFP-LS-------LTGEGIVQLQEVIYPILHALLQFIYTGRTQISEP-LLGPLWAL 280 (806)
Q Consensus 210 Dv~~~v~~~~~~~~aHk~ILaarS~~F-~~-------~~~~~~i~l~~v~~~~f~~lL~fiYtg~~~i~~~-~~~~ll~~ 280 (806)
=|+|-|| |+.|..-+..|.....-+ .. .....++.+ |=+|..|..+|+|+-+|.+.++.+ .+..+++-
T Consensus 14 ~V~LNVG--G~~F~t~~~TL~~~p~S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~~E 90 (124)
T 1s1g_A 14 LIVLNVS--GRRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAYDDE 90 (124)
T ss_dssp EEEEEET--TEEEEEEHHHHTTSTTSSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTTSCHHHHHHH
T ss_pred EEEEEeC--CEEEEEeHHHHhcCCCceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCCcCHHHHHHH
Confidence 3788897 899999999887653322 11 123345666 569999999999999999987654 46889999
Q ss_pred hhhccchhhH-HHHHH
Q 040529 281 SSQFQVMPLV-KQCEE 295 (806)
Q Consensus 281 A~~~~l~~L~-~~C~~ 295 (806)
|+.|++..+. +.|+.
T Consensus 91 a~fy~i~~l~l~~cC~ 106 (124)
T 1s1g_A 91 LAFYGILPEIIGDCCY 106 (124)
T ss_dssp HHHTTCCGGGBCHHHH
T ss_pred HHHcCCChHHHHHHHH
Confidence 9999999883 56543
No 113
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=93.36 E-value=0.087 Score=46.94 Aligned_cols=85 Identities=13% Similarity=0.118 Sum_probs=63.0
Q ss_pred eEEEEEcCeeeEEEeeHHHHhcCCH-HHHHhhcCCC-CCCCcceEEeCCCCHHHHHHHHhHHhcCccccCCCCchhHHHH
Q 040529 349 DVNIYVESHGLVAQSHKIILSLWSV-PFAKMFTNGM-SESYSSDVHLRDVSLKAFKIMLEFMYSGELNIEDSLDFGSLLL 426 (806)
Q Consensus 349 DV~l~v~~~~~~~~aHr~ILaa~S~-yF~~mf~~~~-~Es~~~~I~l~~v~~~~f~~lL~fiYtg~l~i~~~~n~~~~v~ 426 (806)
=|+|.|+|.. |...+..|..... .+.+|++... ......++-+ |=++..|+.||+|+.+|++.++.... +.
T Consensus 6 ~V~LNVGG~~--f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~----~~ 78 (115)
T 3kvt_A 6 RVIINVGGIR--HETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDVC----GP 78 (115)
T ss_dssp EEEEEETTEE--EEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSC----HH
T ss_pred EEEEEECCEE--EEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCccc----HH
Confidence 4788999965 9999999987643 3556665421 1123456665 56899999999999999998776433 67
Q ss_pred HHHHHHHhhCchHH
Q 040529 427 QLLILSDQFGVTLL 440 (806)
Q Consensus 427 ~Ll~~A~~l~l~~L 440 (806)
.+++-|.+|+|+..
T Consensus 79 ~~~~Ea~fy~i~~~ 92 (115)
T 3kvt_A 79 LFEEELEFWGLDSN 92 (115)
T ss_dssp HHHHHHHHHTCCGG
T ss_pred HHHHHHHHhCCChH
Confidence 89999999999874
No 114
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=93.14 E-value=0.23 Score=55.50 Aligned_cols=94 Identities=14% Similarity=0.332 Sum_probs=56.3
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecCC---cccceEEEEEEecCCCCeEeeEEeec--CcccccCCc-----cceeeec
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDGS---RAYIRYWNFQGSMDGKSWTNLRVHEN--DQTMCKHGQ-----FASWAVI 766 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~~---~~~lr~W~~~gs~dg~~W~~l~~~~~--~~~l~~~~~-----~~~~~i~ 766 (806)
..++|++|||+..+.| +.-..+...+ ....+++++++|.||.+|+.+....+ ...+.+... ...++
T Consensus 344 ~~~qwLqVDLg~~~~v--t~v~tqg~~~~~~~~~v~~Y~i~~S~dg~~W~~~~~~~~~~~~~F~GN~d~~~~~~~~~~-- 419 (450)
T 2qqm_A 344 YINEWLQIDLGEEKIV--RGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSFEGNNNYDTPELRTFP-- 419 (450)
T ss_dssp CCSCCEEEEEEEEEEE--EEEEEECCSCTTTCCCEEEEEEEEESSSSSCEECBCTTSSSBCCEECCSSSSSCEEEEEE--
T ss_pred CcCceEEEeCCCcEEE--EEEEecCccCCCCcEEEEEEEEEEECCCCcEEEEEcCCCCcccEecCcCCCCceEEccCC--
Confidence 4578999999986444 3333333222 35689999999999999998754221 112211111 11221
Q ss_pred CCCCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 767 GPNALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 767 ~~~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
.-.-||+||.=+.. +.+ ..+| .+|+||-
T Consensus 420 ----pi~aRyVRi~p~~~-~~~----~i~l-R~ElyGc 447 (450)
T 2qqm_A 420 ----ALSTRFIRIYPERA-THG----GLGL-RMELLGC 447 (450)
T ss_dssp ----EEEEEEEEEEEEEE-BTT----BEEE-EEEEEEE
T ss_pred ----CeEEEEEEEEEeec-cCC----CeEE-EEEEEcc
Confidence 12479999987642 222 3555 5999994
No 115
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=93.02 E-value=0.1 Score=47.10 Aligned_cols=83 Identities=12% Similarity=0.132 Sum_probs=60.6
Q ss_pred eEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCC----CCCCCcceEEeCCCCHHHHHHHHhHHhcCccccCCCCchhHH
Q 040529 349 DVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNG----MSESYSSDVHLRDVSLKAFKIMLEFMYSGELNIEDSLDFGSL 424 (806)
Q Consensus 349 DV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~----~~Es~~~~I~l~~v~~~~f~~lL~fiYtg~l~i~~~~n~~~~ 424 (806)
-|+|.|+|.. |..-+..|..... .||... .......++-+ |=++..|+.||+|+.+|.+.+.....
T Consensus 14 ~V~LNVGG~~--F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~~~---- 83 (124)
T 1s1g_A 14 LIVLNVSGRR--FQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYEC---- 83 (124)
T ss_dssp EEEEEETTEE--EEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTTSC----
T ss_pred EEEEEeCCEE--EEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCCcC----
Confidence 5788999975 9999999975432 233321 11123345655 55999999999999999998765433
Q ss_pred HHHHHHHHHhhCchHHH
Q 040529 425 LLQLLILSDQFGVTLLH 441 (806)
Q Consensus 425 v~~Ll~~A~~l~l~~L~ 441 (806)
+..+++-|++|+|+.+.
T Consensus 84 ~~~l~~Ea~fy~i~~l~ 100 (124)
T 1s1g_A 84 ISAYDDELAFYGILPEI 100 (124)
T ss_dssp HHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHcCCChHH
Confidence 78899999999999873
No 116
>2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A
Probab=92.71 E-value=1.1 Score=41.06 Aligned_cols=94 Identities=9% Similarity=-0.003 Sum_probs=61.4
Q ss_pred ecCCCCeeEEEecCCceeeEeeeeEeeecCCcccceEEEEEEecCC--CCeEeeEEeecCcccccCCccceeeecCCCCC
Q 040529 694 EDGHNCTWWMVDIGQDHQLMCNYYTLRMDGSRAYIRYWNFQGSMDG--KSWTNLRVHENDQTMCKHGQFASWAVIGPNAL 771 (806)
Q Consensus 694 y~~~~nsW~~vd~~~~~~~~p~~Y~~r~~~~~~~lr~W~~~gs~dg--~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~ 771 (806)
.++....|+.|+|+. .+..+..++... ..+...+++|.|| ++|..+.+.+=...-+ ..++-.++++ .
T Consensus 43 s~g~~pq~i~I~~~~--~~~is~~~i~~~----~~k~~~ie~s~~~~p~~w~~i~~~~f~~~~~-~~q~~~f~~~---~- 111 (139)
T 2yc2_A 43 TTGMFPQEFVLRLES--CIRVSKITTLSL----NVRKLAVEKCDQDKPDQFEKVFEVELANRGD-RLQTEVHQVN---I- 111 (139)
T ss_dssp CCSSSCEEEEEEEEE--EEEEEEEEEEEE----SEEEEEEEEECSSSCCCCEEEEEEECCCC---CCEEEEEEEE---E-
T ss_pred CCCCCCeEEEEECCC--ceEEEEEEEEec----CCcEEEEEEecCCCCCceEEEEEEEeecCCC-CceEEEccCC---C-
Confidence 445556899999988 455666666543 2789999999998 7999875421111111 3344456654 2
Q ss_pred cCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 772 RPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 772 ~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
..||+||+-+ .+. + ++-+|-.++++|.
T Consensus 112 -~a~~lrl~i~--s~~-d--~f~~iy~~~v~G~ 138 (139)
T 2yc2_A 112 -RAKYLKFILL--QGH-G--EFATVNRVSVVGG 138 (139)
T ss_dssp -EEEEEEEEEE--EES-S--SCCEEEEEEEEEC
T ss_pred -cEEEEEEEEE--ecc-C--ceEEEEEEEEEec
Confidence 3899999988 222 2 3578888999985
No 117
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=92.52 E-value=0.36 Score=54.00 Aligned_cols=97 Identities=19% Similarity=0.309 Sum_probs=56.5
Q ss_pred CCCCeeEEEecCCceeeEeeeeEeeecC---------CcccceEEEEEEecCCCCeEeeEEeecC--cccccCCc--c-c
Q 040529 696 GHNCTWWMVDIGQDHQLMCNYYTLRMDG---------SRAYIRYWNFQGSMDGKSWTNLRVHEND--QTMCKHGQ--F-A 761 (806)
Q Consensus 696 ~~~nsW~~vd~~~~~~~~p~~Y~~r~~~---------~~~~lr~W~~~gs~dg~~W~~l~~~~~~--~~l~~~~~--~-~ 761 (806)
+..+.|++|||+..+.| +.-.++... .....+.+++++|.||.+|+.+...... ..+.+... . .
T Consensus 341 ~~~~qwLqVDLg~~~~V--t~V~tqG~~~~~~~~~~~~~~~v~~Y~l~yS~dg~~W~~~~~~~~~~~~vF~GN~d~~~~v 418 (460)
T 2qqo_A 341 QPGEEWLQVDLGTPKTV--KGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGKDWEYIQDPRTQQPKLFEGNMHYDTPD 418 (460)
T ss_dssp CTTTCCEEEEEEEEEEE--EEEEEECCCCC--CCCGGGCCCEEEEEEEEESSSSSCEECEETTTTEECCEECCSSSSSCE
T ss_pred CCccceEEEcCCCceEE--EEEEecCCCCCCCccccccceeEEEEEEEEEeCCCceEEEECCCCCccceeccccCCCcee
Confidence 35789999999985443 333333322 2356889999999999999987642211 22211111 1 1
Q ss_pred eeeecCCCCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 762 SWAVIGPNALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 762 ~~~i~~~~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
+-.+. | ..-||+||.-+.-+..+ .+| .+|+||-
T Consensus 419 ~~~l~-p---i~aRyvRi~p~~w~~~~-----i~m-R~El~gc 451 (460)
T 2qqo_A 419 IRRFD-P---IPAQYVRVYPERWSPAG-----IGM-RLEVLGC 451 (460)
T ss_dssp EEEEE-E---EEEEEEEEEEEEECTTC-----CCB-EEEEEEE
T ss_pred eeeeC-c---eEEEEEEEEeCeeecCC-----eeE-EEEEeec
Confidence 11111 1 24799999877544322 222 3899984
No 118
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=92.37 E-value=0.39 Score=53.62 Aligned_cols=93 Identities=13% Similarity=0.178 Sum_probs=61.3
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecCC-cccceEEEEEEecCCCCeEeeEEeecCcccccCCccceeeecCCCCCcCeE
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDGS-RAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPFR 775 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~~-~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~r 775 (806)
....|++||++.. ..-+.-.++-... ....+.+.+++|.||++|..+..-.++... +...+..|+-. .-|
T Consensus 363 ~~~~wl~vDLg~~--~~vn~V~lqe~i~~gqrv~~y~Ve~s~DG~~W~~v~~gt~~~ti-G~kr~~~f~~v------~ar 433 (469)
T 3eyp_A 363 EVKADIIFTLPKT--IEFDCLMIEEVIELGHRTTKWSVEYTVDGKNWITIPEATDKQAI-GHKWIVRLAPV------KAK 433 (469)
T ss_dssp CCCEEEEEEEEEE--EEEEEEEEEECGGGCSCEEEEEEEEESSSSCCEECGGGSSBCCC-TTCEEEEEEEE------EEE
T ss_pred CCCcEEEEECCCC--cEEeEEEEeecccCCCCeEEEEEEEEcCCCceEEEEecccccCC-CceeEEecCCe------eEE
Confidence 3578999999984 3445555554422 245899999999999999987643322222 12234444421 479
Q ss_pred EEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 776 FFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 776 ~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
|+||+-++... ..+|+.|++|+.
T Consensus 434 yVRl~i~~~~g------~p~Ise~~Vy~a 456 (469)
T 3eyp_A 434 QVRLRIQDGKA------CPAIHTFGVYKQ 456 (469)
T ss_dssp EEEEEEEEESS------SCEEEEEEEECC
T ss_pred EEEEEEEcCCC------CeEEEEEEEEcC
Confidence 99999886542 247999999974
No 119
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=92.17 E-value=0.21 Score=57.56 Aligned_cols=98 Identities=15% Similarity=0.196 Sum_probs=55.5
Q ss_pred CCCCeeEEEecCCceeeEeeeeEeeecCCc---ccceEEEEEEecCCCCeEeeEEeecCcccccCCccc---eeeecCCC
Q 040529 696 GHNCTWWMVDIGQDHQLMCNYYTLRMDGSR---AYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFA---SWAVIGPN 769 (806)
Q Consensus 696 ~~~nsW~~vd~~~~~~~~p~~Y~~r~~~~~---~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~~---~~~i~~~~ 769 (806)
...++|++|||+..+.|..-.-.-|.+... ...++++++.|.||.+|+..........+.++.... +=.+.
T Consensus 302 ~~~~qwlqVDl~~~~~it~v~tQG~~~~~~~~~~~v~~y~v~~s~dg~~w~~y~~~~~~~vf~GN~d~~~~v~~~l~--- 378 (577)
T 4gz9_A 302 DSYKEWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYRVDISSNGEDWISLKEGNKAIIFQGNTNPTDVVLGVFS--- 378 (577)
T ss_dssp CCTTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESSSSSCEECBSSSSBCCEECCSSSSSCEEEEEE---
T ss_pred CCCCeEEEEcCCCEEEEEEEEccCCCCCCCCcceeEEEEEEEEEcCCCcEEEEecCCCceEEeCCCCCCcEeEeecC---
Confidence 457899999999854443221111222221 358899999999999999876433333332222111 11111
Q ss_pred CCcCeEEEEEEEeccCCCCCCCceEEEeceEEee
Q 040529 770 ALRPFRFFRVVLMGPTADAANSWNFCICFLELYG 803 (806)
Q Consensus 770 ~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G 803 (806)
..---||+||.=+.-+. . -.| .+|+||
T Consensus 379 ~pi~aryvRi~p~~~~~--~--~~m---R~El~G 405 (577)
T 4gz9_A 379 KPLITRFVRIKPVSWET--G--ISM---RFEVYG 405 (577)
T ss_dssp EEEEEEEEEEEEEEEES--S--CCB---EEEEEE
T ss_pred CCcEEEEEEEEeEeccc--c--EEE---EEEecc
Confidence 11236999998775432 1 123 489998
No 120
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=91.59 E-value=0.2 Score=43.31 Aligned_cols=85 Identities=14% Similarity=0.088 Sum_probs=60.2
Q ss_pred EEEEEcCeeeEEEeeHHHHhcCCH-HHHHhhcC-CCCCCCcceEEeCCCCHHHHHHHHhHHhc-CccccCCCCchhHHHH
Q 040529 350 VNIYVESHGLVAQSHKIILSLWSV-PFAKMFTN-GMSESYSSDVHLRDVSLKAFKIMLEFMYS-GELNIEDSLDFGSLLL 426 (806)
Q Consensus 350 V~l~v~~~~~~~~aHr~ILaa~S~-yF~~mf~~-~~~Es~~~~I~l~~v~~~~f~~lL~fiYt-g~l~i~~~~n~~~~v~ 426 (806)
|+|.|+|.. |...+..|...-. .+.+|+.. ........++-+ |=++..|+.||+|+.+ |++.++.... +.
T Consensus 3 v~LNVGG~~--f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~----~~ 75 (100)
T 1t1d_A 3 VVINVSGLR--FETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVP----LD 75 (100)
T ss_dssp EEEEETTEE--EEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSC----HH
T ss_pred EEEEECCEE--EEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCCC----HH
Confidence 678999975 9999999975421 23333321 111123456666 5589999999999998 8998765443 78
Q ss_pred HHHHHHHhhCchHHH
Q 040529 427 QLLILSDQFGVTLLH 441 (806)
Q Consensus 427 ~Ll~~A~~l~l~~L~ 441 (806)
.+++-|.+|+|+.+.
T Consensus 76 ~~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 76 VFSEEIKFYELGENA 90 (100)
T ss_dssp HHHHHHHHTTCCHHH
T ss_pred HHHHHHHHcCCCHHH
Confidence 899999999998754
No 121
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=91.58 E-value=0.44 Score=53.10 Aligned_cols=96 Identities=16% Similarity=0.227 Sum_probs=56.0
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecCC-----cccceEEEEEEecCCCCeEeeEEeecCcccccCC---ccceeeecCC
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDGS-----RAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHG---QFASWAVIGP 768 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~~-----~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~---~~~~~~i~~~ 768 (806)
..+.|++|||+..+.+ +.-.++...+ ....+++++++|.||.+|..+........+.+.. ...+-.+.
T Consensus 185 ~~~qwlqvDLg~~~~v--t~v~tqg~~~~~~~~~~~v~~y~l~~S~dg~~W~~~~~~~~~~~F~GN~d~~~~v~~~l~-- 260 (450)
T 2qqm_A 185 SYREWIQVDLGLLRFV--TAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFP-- 260 (450)
T ss_dssp STTCCEEEEEEEEEEE--EEEEEECEECTTTCCEEEEEEEEEEEESSSSSEEECBSSSSBCCEECCSSSSCCEEEEEE--
T ss_pred CCCceEEEcccceEEE--EEEeccCCCCCCCCcceeEEEEEEEEeCCCCceeEEeCCCeeeEeecccCCCcEEEEecC--
Confidence 3579999999985333 4333433221 2468999999999999999876432222232221 11222222
Q ss_pred CCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 769 NALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 769 ~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
..-.-||+||.-+.-+ + ..++ .+|+||-
T Consensus 261 -~pi~aRyvRi~p~~w~--~----~~~l-r~E~~Gc 288 (450)
T 2qqm_A 261 -KPLITRFVRIKPATWE--T----GISM-RFEVYGC 288 (450)
T ss_dssp -EEEEEEEEEEEEEEEE--S----SCCB-EEEEEEE
T ss_pred -CceEEEEEEEEEeecc--C----ceeE-EEEEecc
Confidence 1124799999976533 2 1233 3899984
No 122
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=91.50 E-value=0.27 Score=45.28 Aligned_cols=82 Identities=11% Similarity=0.119 Sum_probs=61.9
Q ss_pred cEEEEecCCCeEEEeeeeeecccCccc-CCC-------CCCceEEeCCCCHHHHHHHHHhhccCcccCCCC-CchhHHHh
Q 040529 210 DMFFIVGTEEKLVPAHKVILQASGNFP-LSL-------TGEGIVQLQEVIYPILHALLQFIYTGRTQISEP-LLGPLWAL 280 (806)
Q Consensus 210 Dv~~~v~~~~~~~~aHk~ILaarS~~F-~~~-------~~~~~i~l~~v~~~~f~~lL~fiYtg~~~i~~~-~~~~ll~~ 280 (806)
=|+|.|| |+.|...+..|.....-+ ... ....++.+ |=++..|..+|+|+-+|.+.++.+ .+..+++-
T Consensus 36 ~V~LNVG--G~~F~T~~~TL~~~P~S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~eE 112 (140)
T 2nz0_B 36 LIVLNVS--GRRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAYDDE 112 (140)
T ss_dssp EEEEEET--TEEEEEEHHHHHTCTTSTTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTTSCHHHHHHH
T ss_pred EEEEEEC--CEEEEeeHHHHhcCCCeeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCCcCHHHHHHH
Confidence 3788897 899999999887653322 111 23456666 569999999999999999987654 47889999
Q ss_pred hhhccchhh-HHHHH
Q 040529 281 SSQFQVMPL-VKQCE 294 (806)
Q Consensus 281 A~~~~l~~L-~~~C~ 294 (806)
|+.|++..+ ++.|+
T Consensus 113 a~fy~i~~l~l~~CC 127 (140)
T 2nz0_B 113 LAFYGILPEIIGDCC 127 (140)
T ss_dssp HHHHTCCGGGBCTTT
T ss_pred HHHcCCChHHHHHHH
Confidence 999999987 44554
No 123
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=91.23 E-value=0.15 Score=47.06 Aligned_cols=83 Identities=12% Similarity=0.151 Sum_probs=60.7
Q ss_pred eeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCC----CCCCCcceEEeCCCCHHHHHHHHhHHhcCccccCCCCchhH
Q 040529 348 ADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNG----MSESYSSDVHLRDVSLKAFKIMLEFMYSGELNIEDSLDFGS 423 (806)
Q Consensus 348 sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~----~~Es~~~~I~l~~v~~~~f~~lL~fiYtg~l~i~~~~n~~~ 423 (806)
.-|+|.|+|.. |...+..|.... ..||... .......++-+ |=++..|+.||+|+.+|.+.+.....
T Consensus 35 ~~V~LNVGG~~--F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~~~--- 105 (140)
T 2nz0_B 35 ELIVLNVSGRR--FQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYEC--- 105 (140)
T ss_dssp CEEEEEETTEE--EEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTTSC---
T ss_pred CEEEEEECCEE--EEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCCcC---
Confidence 45788999975 999999997643 2344331 01122345555 55999999999999999998765433
Q ss_pred HHHHHHHHHHhhCchHH
Q 040529 424 LLLQLLILSDQFGVTLL 440 (806)
Q Consensus 424 ~v~~Ll~~A~~l~l~~L 440 (806)
+..+++-|++|+|+.+
T Consensus 106 -~~~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 106 -ISAYDDELAFYGILPE 121 (140)
T ss_dssp -HHHHHHHHHHHTCCGG
T ss_pred -HHHHHHHHHHcCCChH
Confidence 7889999999999886
No 124
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=91.17 E-value=0.21 Score=59.47 Aligned_cols=96 Identities=15% Similarity=0.200 Sum_probs=57.1
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecC---CcccceEEEEEEecCCCCeEeeEEeecCcccccCCcc---ceeeecCCCC
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDG---SRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQF---ASWAVIGPNA 770 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~---~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~---~~~~i~~~~~ 770 (806)
..+.|++|||+..+.| +.-..+-.+ .....+++++++|.||.+|+..........+.+.... .+-.+. .
T Consensus 663 d~~qwLQVDLg~~~~V--tgV~tQG~~~~~~~~~VtsY~l~yS~DG~~W~~y~~~g~~kvF~GN~D~~t~v~~~l~---~ 737 (770)
T 2r7e_B 663 NPKEWLQVDFQKTMKV--TGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNSLD---P 737 (770)
T ss_dssp CSSCCEEECCSSCCCB--CCEEECCCCCTTCCCCCCEEEECCBSSTTCBCCCBCSSSBCCEECCSCSSSCEEECCS---S
T ss_pred CCCceEEEccccceEE--EEEEEeCCcCcCcccceEEEEEEEEcCCCcEEEEecCCceeecccCCCCCceEEEEcC---C
Confidence 3578999999986443 332333222 2356899999999999999977532222233222221 122233 2
Q ss_pred CcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 771 LRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 771 ~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
.-..||+||.-+.-+ + ..++ .+||||-
T Consensus 738 pi~ARyVRi~p~~w~--~----~i~m-R~ElyGC 764 (770)
T 2r7e_B 738 PLLTRYLRIHPQSWV--H----QIAL-RMEVLGC 764 (770)
T ss_dssp CCCCSBEEEEECSCS--S----SCCB-CEECCBC
T ss_pred CEEEEEEEEEEEecC--C----CeEE-EEEEEcc
Confidence 235799999877533 2 2343 4999994
No 125
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=91.00 E-value=0.098 Score=45.80 Aligned_cols=81 Identities=14% Similarity=0.151 Sum_probs=58.9
Q ss_pred EEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCC----CCCCCcceEEeCCCCHHHHHHHHhHHhcCccccCCCCchhHHH
Q 040529 350 VNIYVESHGLVAQSHKIILSLWSVPFAKMFTNG----MSESYSSDVHLRDVSLKAFKIMLEFMYSGELNIEDSLDFGSLL 425 (806)
Q Consensus 350 V~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~----~~Es~~~~I~l~~v~~~~f~~lL~fiYtg~l~i~~~~n~~~~v 425 (806)
|+|.|+|.. |...+..|..... .||... .......++-+ |=++..|+.||+|+.+|.+.+..... +
T Consensus 2 V~LNVGG~~--f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~~----~ 71 (105)
T 1nn7_A 2 IVLNVSGTR--FQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRHEC----I 71 (105)
T ss_dssp EEEEETTEE--EEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTTSC----H
T ss_pred EEEEECCEE--EEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCCcC----H
Confidence 678999975 9999999976432 233331 00112345555 45899999999999999998765433 7
Q ss_pred HHHHHHHHhhCchHH
Q 040529 426 LQLLILSDQFGVTLL 440 (806)
Q Consensus 426 ~~Ll~~A~~l~l~~L 440 (806)
..+++-|++|+|+.+
T Consensus 72 ~~l~~Ea~fy~i~~l 86 (105)
T 1nn7_A 72 SAYDEELAFFGLIPE 86 (105)
T ss_dssp HHHHHHHHHHTCCSC
T ss_pred HHHHHHHHHcCCCHH
Confidence 889999999999876
No 126
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=90.93 E-value=0.6 Score=52.14 Aligned_cols=96 Identities=19% Similarity=0.236 Sum_probs=55.9
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecC-----CcccceEEEEEEecCCCCeEeeEEeecCcccccCCc---cceeeecCC
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDG-----SRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQ---FASWAVIGP 768 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~-----~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~---~~~~~i~~~ 768 (806)
..+.|++||++..+.| +.-..+... .....+++.+++|.||.+|..+........+++... +.+-.+.
T Consensus 183 ~~~~wlqVDLg~~~~v--t~v~tqG~~~~~~~~~~~v~~y~l~~S~dg~~W~~~~~~~~~~~F~Gn~d~~~~v~~~l~-- 258 (460)
T 2qqo_A 183 SNKEYLQVDLRFLTML--TAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVLNKLH-- 258 (460)
T ss_dssp STTCCEEEEEEEEEEE--EEEEEECEECTTTCCEEEEEEEEEEEESSSSSCEECEETTEECCEECCSSSSSCEEEEEE--
T ss_pred CcceeEeccCCceEEE--EEEEeecCCCCCCCccceEEEEEEEEEcCCCCeeEecCCCccEEEecccCCCceEEEeCC--
Confidence 3678999999985333 333332221 124688999999999999998765322223322211 1222222
Q ss_pred CCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 769 NALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 769 ~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
..-.-||+||.-+.-+. . .+| .+|+||-
T Consensus 259 -~pi~aRyvRi~p~~~~~--~----~~l-r~E~~Gc 286 (460)
T 2qqo_A 259 -APLLTRFVRIRPQTWHS--G----IAL-RLELFGC 286 (460)
T ss_dssp -EEEEEEEEEEEEEEEES--S----CCB-EEEEEEE
T ss_pred -CCeeeeEEEEEeeeccC--c----ceE-EEeeeec
Confidence 11247999998775432 2 233 4899984
No 127
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=90.92 E-value=0.58 Score=53.97 Aligned_cols=97 Identities=19% Similarity=0.304 Sum_probs=56.3
Q ss_pred CCCCeeEEEecCCceeeEeeeeEeeecC---------CcccceEEEEEEecCCCCeEeeEEeecC--cccccCCc---cc
Q 040529 696 GHNCTWWMVDIGQDHQLMCNYYTLRMDG---------SRAYIRYWNFQGSMDGKSWTNLRVHEND--QTMCKHGQ---FA 761 (806)
Q Consensus 696 ~~~nsW~~vd~~~~~~~~p~~Y~~r~~~---------~~~~lr~W~~~gs~dg~~W~~l~~~~~~--~~l~~~~~---~~ 761 (806)
+..+.|++|||+..+.| +.-.++... .....+++++++|.||.+|+.+...... ..+.+... ..
T Consensus 460 ~~~~qwLqVDLg~~~~V--t~V~tqG~~~~~~~~~~~~~~~v~~Y~l~~S~dg~~W~~~~~~~~~~~~vf~GN~d~~t~~ 537 (579)
T 2qqk_A 460 QPGEEWLQVDLGTPKTV--KGVIIQGARGGDSITAVEARAFVRKFKVSYSLNGKDWEYIQDPRTQQPKLFEGNMHYDTPD 537 (579)
T ss_dssp CTTTCCEEEEEEEEEEE--EEEEEECBC---------CCBCEEEEEEEEESSSSCCEECBCTTTSSBCCEECCSSSSSCE
T ss_pred CCccceEEEecCCceEE--EEEEeCCCCCCCCccccccceeeEEEEEEEEcCCCceeEEEcCCCCceeeeeCccCCCCcc
Confidence 35789999999985444 443333322 2356889999999999999987542111 12211111 11
Q ss_pred eeeecCCCCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 762 SWAVIGPNALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 762 ~~~i~~~~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
+-.+. | ..-||+||.-+.=+..+ .+| .+|+||-
T Consensus 538 ~~~l~-p---i~aRyVRi~p~~w~~~~-----i~m-R~El~gc 570 (579)
T 2qqk_A 538 IRRFD-P---IPAQYVRVYPERWSPAG-----IGM-RLEVLGC 570 (579)
T ss_dssp EEEEE-E---EEEEEEEEEEEEEBTTB-----CCB-EEEEEEE
T ss_pred ccccC-c---eEEEEEEEEcceeccCC-----cEE-EEEeecC
Confidence 11121 1 24799999877543322 232 3899984
No 128
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=90.87 E-value=0.35 Score=55.76 Aligned_cols=50 Identities=16% Similarity=0.399 Sum_probs=34.6
Q ss_pred CCCCeeEEEecCCceeeEeeeeEeeecCC---cccceEEEEEEecCCCCeEeeEE
Q 040529 696 GHNCTWWMVDIGQDHQLMCNYYTLRMDGS---RAYIRYWNFQGSMDGKSWTNLRV 747 (806)
Q Consensus 696 ~~~nsW~~vd~~~~~~~~p~~Y~~r~~~~---~~~lr~W~~~gs~dg~~W~~l~~ 747 (806)
+..++|++|||+..+.| +.-..+-+++ ....++++++.|.||.+|+....
T Consensus 461 ~~~~qwLqVDLg~~~~V--tgV~tQG~~~~~~~~~vtsY~l~yS~Dg~~W~~~~~ 513 (577)
T 4gz9_A 461 PYTNEWLQVDLGDEKIV--RGVIIQGGKHRENKVFMRKFKIAYSNNGSDWKTIMD 513 (577)
T ss_dssp CCCSCCEEEEEEEEEEE--EEEEEECEESSSCEECEEEEEEEEESSSSSCEECBC
T ss_pred CCCCceEEEECCCcEEE--EEEEEeCCCCCCcceeEEEEEEEEECCCCCeEEEEc
Confidence 34678999999985443 3322322222 24688999999999999988754
No 129
>1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A
Probab=90.83 E-value=3.3 Score=38.63 Aligned_cols=94 Identities=9% Similarity=0.125 Sum_probs=59.4
Q ss_pred ecCCCCeeEEEecCCceeeEeeeeEeeecCCcccceEEEEEEecCCC--CeEeeEEeecCcccccCCccceeeecCCCCC
Q 040529 694 EDGHNCTWWMVDIGQDHQLMCNYYTLRMDGSRAYIRYWNFQGSMDGK--SWTNLRVHENDQTMCKHGQFASWAVIGPNAL 771 (806)
Q Consensus 694 y~~~~nsW~~vd~~~~~~~~p~~Y~~r~~~~~~~lr~W~~~gs~dg~--~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~ 771 (806)
+++....|+.|+|+.. ...+...+... ..+.+.++.|.||+ +|..+.+.+=...- +....+.+.. .
T Consensus 51 t~g~~Pq~i~Idf~k~--~~is~~~i~~~----~vk~~~ie~s~d~~p~~w~~i~e~ef~~~~---n~~Q~~~~~~---~ 118 (153)
T 1tvg_A 51 TTGMFPQEFIICFHKH--VRIERLVIQSY----FVQTLKIEKSTSKEPVDFEQWIEKDLVHTE---GQLQNEEIVA---H 118 (153)
T ss_dssp CCSCSSEEEEEEEEEE--EEEEEEEEEEE----SEEEEEEEEECSSSSCCCEEEEEEECCCCT---TCCEEEEECC---C
T ss_pred CCCCCCcEEEEECCCc--eEEEEEEEEec----CCEEEEEEEECCCCCcceEEeEEEEecCCC---CcEEEEEcCC---C
Confidence 5555678999999874 33444333322 27999999999997 99987554222211 2233444431 2
Q ss_pred cCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 772 RPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 772 ~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
..-||+||+-+ .+.+ ....|-.++++|.
T Consensus 119 ~~a~~lRl~i~--s~~d---~fv~Iy~l~v~G~ 146 (153)
T 1tvg_A 119 GSATYLRFIIV--SAFD---HFASVHSVSAEGT 146 (153)
T ss_dssp EEEEEEEEEEE--EESS---SCCEEEEEEEEEE
T ss_pred ceeEEEEEEEE--cccc---cEEEEEEEEEEEE
Confidence 35899999988 2222 2567778888885
No 130
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=90.82 E-value=0.18 Score=44.12 Aligned_cols=82 Identities=13% Similarity=0.107 Sum_probs=61.1
Q ss_pred EEEEecCCCeEEEeeeeeecccCcc-cCCC-------CCCceEEeCCCCHHHHHHHHHhhccCcccCCCC-CchhHHHhh
Q 040529 211 MFFIVGTEEKLVPAHKVILQASGNF-PLSL-------TGEGIVQLQEVIYPILHALLQFIYTGRTQISEP-LLGPLWALS 281 (806)
Q Consensus 211 v~~~v~~~~~~~~aHk~ILaarS~~-F~~~-------~~~~~i~l~~v~~~~f~~lL~fiYtg~~~i~~~-~~~~ll~~A 281 (806)
|+|-|| |+.|...+..|.....- +... ....++.+ |=+|..|..+|+|+-+|.+.++.+ .+..+++-|
T Consensus 2 V~LNVG--G~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~~Ea 78 (105)
T 1nn7_A 2 IVLNVS--GTRFQTWQDTLERYPDTLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRHECISAYDEEL 78 (105)
T ss_dssp EEEEET--TEEEEECHHHHHTSCSSSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHHH
T ss_pred EEEEEC--CEEEEEeHHHHhcCCCccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHHH
Confidence 678897 89999999988765432 2221 12345555 569999999999999999987654 468899999
Q ss_pred hhccchhhH-HHHHH
Q 040529 282 SQFQVMPLV-KQCEE 295 (806)
Q Consensus 282 ~~~~l~~L~-~~C~~ 295 (806)
+.|+++.+. +.|+.
T Consensus 79 ~fy~i~~l~~~~cc~ 93 (105)
T 1nn7_A 79 AFFGLIPEIIGDCCY 93 (105)
T ss_dssp HHHTCCSCCBCHHHH
T ss_pred HHcCCCHHHHHHHHH
Confidence 999999873 55553
No 131
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel, glycosidase, hydrolase; 2.00A {Bifidobacterium longum}
Probab=90.69 E-value=0.046 Score=66.77 Aligned_cols=100 Identities=10% Similarity=0.142 Sum_probs=0.0
Q ss_pred CCeeEEEecCCceeeEeeeeEeeec--CCcccceEEEEEEec-CCCCeEeeEEeecCcccccCCccceeeecCCCCCcCe
Q 040529 698 NCTWWMVDIGQDHQLMCNYYTLRMD--GSRAYIRYWNFQGSM-DGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPF 774 (806)
Q Consensus 698 ~nsW~~vd~~~~~~~~p~~Y~~r~~--~~~~~lr~W~~~gs~-dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~ 774 (806)
++.|+.|||+..+.|.--.|.-|.+ +.....+.+.++.|. ||.+|+.+..- .+.......+..+. .....
T Consensus 1270 PgqWLqVDLGe~~tIsgf~YqpRqdg~~~NG~VksYkIeVS~dDG~nWttVa~G----TFsgn~t~kti~Fd---~PVkA 1342 (1376)
T 2zxq_A 1270 GTAWYQFNLNEPTTINGLRYLPRSGGMNANGKIKGYKITLTLADGTTKDVVTDA----EFSTTTMWQKASFD---AVENV 1342 (1376)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEcCCcEEEEEEEEecCccCCCCCCceEEEEEEEECCCCCeEEEEEee----EEcCCCceEEEEeC---CCceE
Confidence 3589999999876665556666765 344578999999999 99999876421 12222233334443 22258
Q ss_pred EEEEEEEeccCCCCC--CCceEEEeceEEeee
Q 040529 775 RFFRVVLMGPTADAA--NSWNFCICFLELYGY 804 (806)
Q Consensus 775 r~fri~q~g~n~~~~--~~~~l~l~~~e~~G~ 804 (806)
||+||.-+......+ +..+.+|.-|++||.
T Consensus 1343 RYVRf~ats~~gg~g~~~Nk~aSIAEf~Vyg~ 1374 (1376)
T 2zxq_A 1343 TAVRLTVLSSAGQSDSQANKFASAAELRLTTD 1374 (1376)
T ss_dssp --------------------------------
T ss_pred EEEEEEEEEccCCCCccccceEEEEEEEEecc
Confidence 999999986654421 113689999999984
No 132
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=90.49 E-value=0.4 Score=55.34 Aligned_cols=96 Identities=19% Similarity=0.235 Sum_probs=56.2
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecC-----CcccceEEEEEEecCCCCeEeeEEeecCcccccCCc---cceeeecCC
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDG-----SRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQ---FASWAVIGP 768 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~-----~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~---~~~~~i~~~ 768 (806)
..++|++|||+..+.+ +.-..+... .....+++++++|.||.+|..+....+...+.+... ..+-.+.
T Consensus 302 ~~~qwlqVDLg~~~~v--t~v~tqG~~~~~~~~~~~v~~y~l~~S~dg~~W~~~~~~~~~~~f~GN~d~~~~v~~~l~-- 377 (579)
T 2qqk_A 302 SNKEYLQVDLRFLTML--TAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDATEVVLNKLH-- 377 (579)
T ss_dssp STTCCEEEEEEEEEEE--EEEEEECEECTTTCCEEEEEEEEEEEESSSSSCEECEETTEECCEECCSSSSCCEEEEEE--
T ss_pred CCCceEEeecceeEEE--EEEEccCCccCCCCcccceEEEEEEEECCCCceeeeecCCcceEEcCCCCCCcEEEEeCC--
Confidence 4689999999985333 332233221 124578999999999999998765332222322211 1111222
Q ss_pred CCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 769 NALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 769 ~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
..-.-||+||.-+.-+. ..++ .+|+||-
T Consensus 378 -~pi~aRyvRi~p~~~~~------~~~l-r~E~~Gc 405 (579)
T 2qqk_A 378 -APLLTRFVRIRPQTWHS------GIAL-RLELFGC 405 (579)
T ss_dssp -EEEEEEEEEEEEEEEES------SCCB-EEEEEEE
T ss_pred -CCeeeEEEEEEEEEcCC------ccEE-eeeeecc
Confidence 12247999999776432 2333 4899984
No 133
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=88.59 E-value=0.65 Score=41.22 Aligned_cols=77 Identities=8% Similarity=-0.047 Sum_probs=59.7
Q ss_pred EEEEecCCCeEEEeeeeeecccCccc-CCC--------CCCceEEeCCCCHHHHHHHHHhhccCcccCCCC-CchhHHHh
Q 040529 211 MFFIVGTEEKLVPAHKVILQASGNFP-LSL--------TGEGIVQLQEVIYPILHALLQFIYTGRTQISEP-LLGPLWAL 280 (806)
Q Consensus 211 v~~~v~~~~~~~~aHk~ILaarS~~F-~~~--------~~~~~i~l~~v~~~~f~~lL~fiYtg~~~i~~~-~~~~ll~~ 280 (806)
|+|-|| |+.|...+..|.....-+ ..+ ....++.+ |-+|..|..+|+|+-+|.+.++.+ ....+++-
T Consensus 7 V~LNVG--G~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINVG--GIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEET--TEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEEC--CEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 788897 899999999998664332 111 23456666 578999999999999999987764 46789999
Q ss_pred hhhccchhhH
Q 040529 281 SSQFQVMPLV 290 (806)
Q Consensus 281 A~~~~l~~L~ 290 (806)
|..|++....
T Consensus 84 a~fy~i~~~~ 93 (115)
T 3kvt_A 84 LEFWGLDSNQ 93 (115)
T ss_dssp HHHHTCCGGG
T ss_pred HHHhCCChHH
Confidence 9999998764
No 134
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=88.28 E-value=0.74 Score=53.81 Aligned_cols=94 Identities=17% Similarity=0.201 Sum_probs=55.2
Q ss_pred CeeEEEecCCceeeEeeeeEeeecC---CcccceEEEEEEecCCCCeEeeEEeec--CcccccCC---ccceeeecCCCC
Q 040529 699 CTWWMVDIGQDHQLMCNYYTLRMDG---SRAYIRYWNFQGSMDGKSWTNLRVHEN--DQTMCKHG---QFASWAVIGPNA 770 (806)
Q Consensus 699 nsW~~vd~~~~~~~~p~~Y~~r~~~---~~~~lr~W~~~gs~dg~~W~~l~~~~~--~~~l~~~~---~~~~~~i~~~~~ 770 (806)
++|++|||+..+.+ +.-.++-.. .....+++++++|.||.+|+.+..... ...+.+.. ...+-.+. .
T Consensus 383 ~qwlqVDLg~~~~v--t~v~tqg~~~~~~~~~v~~y~i~yS~Dg~~W~~~~~~~~~~~~~f~gn~d~~~~v~~~l~---~ 457 (647)
T 1sdd_B 383 EPWIQVDMQKEVLL--TGIQTQGAKHYLKPYYTTEFCVAYSLDRKNWRIFKGNSTRNVMYFGGNSDASTIKENQID---P 457 (647)
T ss_dssp CSCEEEEEEEEEEE--EEEEEECEESSSSEEEEEEEEEEEESSSSSCEECCSSCSSSSCCEECCSSSSSCEEEEEE---E
T ss_pred cceEEeccCCeEEE--EEEEEcCCCCCCCccEEEEEEEEEEcCCCceEEecccCCCcceEecCCCCCCceeEEcCC---C
Confidence 68999999985333 333333221 235689999999999999998764322 12221111 11111222 1
Q ss_pred CcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 771 LRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 771 ~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
.---||+||.-+.-+. ..++. +|+||-
T Consensus 458 pi~aRyVRi~p~~~~~------~~~lr-~ElyGc 484 (647)
T 1sdd_B 458 PVVARYIRISPTGSYN------KPALR-LELQGC 484 (647)
T ss_dssp EEEEEEEEEEEEEEES------SCEEE-EEEEEE
T ss_pred CEEEEEEEEEEEeecC------cceee-eccccc
Confidence 1247999999775332 23444 999984
No 135
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=88.01 E-value=0.25 Score=58.07 Aligned_cols=89 Identities=10% Similarity=0.063 Sum_probs=26.7
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecCCcccceEEEEEEecCCCCeEeeEEeecCcccccCCccceeeecCCCCCcCeEE
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDGSRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPFRF 776 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~r~ 776 (806)
....|+.||++.-+.+.--.|..+.....+ .+++|+|.||++|+.++. . .+...|.... ...+-||
T Consensus 626 ~~g~wi~VdL~~~~~V~~I~i~~~~~~~~~---~~~ve~S~DGk~W~~v~~-~--------~~~~~~~~~~--~pv~ARy 691 (716)
T 2cho_A 626 AAGNSVEIELDAIYPGENIQINFGKDAPCT---WGRLEISTDAKEWKTVDL-K--------QKESRLSAGL--QKAPVKF 691 (716)
T ss_dssp -----CEEEEEEEEEEEEEEECC------------------------------------------CCEEEC--TTCEEEE
T ss_pred CCCCEEEEEcCCcEEEEEEEEecCCCCCCc---eEEEEEECCCCCccCCCc-C--------CcceEEEecc--CCceeEE
Confidence 457899999988544443344444332222 289999999999998852 1 1122455531 1347999
Q ss_pred EEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 777 FRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 777 fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
+|++-++.+..+. | +.-|.++..
T Consensus 692 VRl~~~~~~~~~~--w---i~Ef~V~~~ 714 (716)
T 2cho_A 692 VRFTNVSDEEQQV--Y---LRQFVLTIE 714 (716)
T ss_dssp EEC------------------CEEEEES
T ss_pred EEEEecccCCCCe--e---EEEEEEecc
Confidence 9999998764433 4 778888764
No 136
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=87.19 E-value=0.7 Score=54.95 Aligned_cols=95 Identities=19% Similarity=0.197 Sum_probs=55.9
Q ss_pred CCCCeeEEEecCCceeeEeeeeEeeec---CCcccceEEEEEEecCCCCeEeeEEeec--CcccccCCcc-----ceeee
Q 040529 696 GHNCTWWMVDIGQDHQLMCNYYTLRMD---GSRAYIRYWNFQGSMDGKSWTNLRVHEN--DQTMCKHGQF-----ASWAV 765 (806)
Q Consensus 696 ~~~nsW~~vd~~~~~~~~p~~Y~~r~~---~~~~~lr~W~~~gs~dg~~W~~l~~~~~--~~~l~~~~~~-----~~~~i 765 (806)
...++|++|||+..+.| +.-.++-. ......+++++++|.||.+|+.+....+ ...+ +|+. .+-.+
T Consensus 503 ~~~~qwLQVDLg~~~~V--t~V~tQG~~~~~~~~~v~sY~I~yS~DG~~W~~y~~~~~g~~~vF--~GN~D~~tvv~~~l 578 (770)
T 2r7e_B 503 KEPFSWIKVDLLAPMII--HGIKTQGARQKFSSLYISQFIIMYSLDGKKWQTYRGNSTGTLMVF--FGNVDSSGIKHNIF 578 (770)
T ss_dssp CSSCCCEEEEEEEEEEE--CBCCCCCEECSSSEECCSEEEEEEESSSSSCBCCCCSSSSSSCCC--CCCSSTTCCCCCCC
T ss_pred CCCCceEEecCCceEEE--EEEEEcccCcCCcccceEEEEEEEecCCCccEEeecccccceeee--cCCCCCCceeEEec
Confidence 45789999999985333 22222211 1234678999999999999998764221 1222 2322 11222
Q ss_pred cCCCCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 766 IGPNALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 766 ~~~~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
. ..-.-||+||.-+.-+ +. .++ .+|+||.
T Consensus 579 ~---~pi~ARyVRi~p~~~~--~~----~~m-RvElyGc 607 (770)
T 2r7e_B 579 N---PPIIARYIRLHPTHYS--IR----STL-RMELMGC 607 (770)
T ss_dssp S---SCEEEEEEEEEEEECS--SS----CEE-CCCCBCC
T ss_pred c---CceeEeEEEEeccccc--cc----cee-eeecccc
Confidence 2 2234799999988643 21 243 3899984
No 137
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=87.19 E-value=0.45 Score=55.69 Aligned_cols=98 Identities=17% Similarity=0.271 Sum_probs=55.9
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeec-CCcccceEEEEEEecCCCCeEeeEEeec--CcccccCCc---cceeeecCCCC
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMD-GSRAYIRYWNFQGSMDGKSWTNLRVHEN--DQTMCKHGQ---FASWAVIGPNA 770 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~-~~~~~lr~W~~~gs~dg~~W~~l~~~~~--~~~l~~~~~---~~~~~i~~~~~ 770 (806)
..++|++|||+..+.|.--...-+.. +.....++++++.|.||.+|+....... +..+.+... ..+-.+. .
T Consensus 541 ~~~qwLqVDLg~~~~vt~v~tqg~~~~~~~~~v~~y~l~~S~dg~~W~~~~~~~~~~~~~F~GN~d~~~~~~~~l~---~ 617 (647)
T 1sdd_B 541 NNNQWLQIDLLKIKKITAIVTQGCKSLSSEMYVKSYTIHYSDQGTDWKPYREKSSMVDKIFEGNNNVRGHVKNFFN---P 617 (647)
T ss_dssp SSCCCEEEEEEEEEEEEEEEEECEEETTEEEEEEEECEEEESSSSCCEECCCSSCSSCCCEECCSSSSCCEEEEEE---E
T ss_pred CCCcEEEEeCCCceEEEEEEeecCCCCCCCcceEEEEEEEECCCCcEEEEEcCCCcceeeeeccCCCCceEEEeCC---C
Confidence 35799999999864443322222221 1235689999999999999998754322 122221111 1111222 1
Q ss_pred CcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 771 LRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 771 ~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
.-.-||+||.-+.-+ + ..|| .+|+||-
T Consensus 618 pi~ARyvRi~p~~w~--~----~i~~-R~El~Gc 644 (647)
T 1sdd_B 618 PIISRFIRIIPKTWN--Q----SIAL-RLELFGC 644 (647)
T ss_dssp EEEEEEEEECCCEEE--S----SCEE-EEEEEEE
T ss_pred cEEEEEEEEEEEEcC--C----CcEE-EEEEEeE
Confidence 224799999866433 2 3444 4999994
No 138
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=87.04 E-value=0.99 Score=38.93 Aligned_cols=77 Identities=12% Similarity=-0.008 Sum_probs=58.1
Q ss_pred EEEEecCCCeEEEeeeeeecccCcc-cCCC--------CCCceEEeCCCCHHHHHHHHHhhcc-CcccCCCC-CchhHHH
Q 040529 211 MFFIVGTEEKLVPAHKVILQASGNF-PLSL--------TGEGIVQLQEVIYPILHALLQFIYT-GRTQISEP-LLGPLWA 279 (806)
Q Consensus 211 v~~~v~~~~~~~~aHk~ILaarS~~-F~~~--------~~~~~i~l~~v~~~~f~~lL~fiYt-g~~~i~~~-~~~~ll~ 279 (806)
|+|-|| |+.|...+..|+....- +..+ ....++.+ |-+|..|+.+|+|+-| |++.++.+ .+..+++
T Consensus 3 v~LNVG--G~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVS--GLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEET--TEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEEC--CEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 678897 89999999998654322 2111 23456766 6689999999999999 89877644 4678999
Q ss_pred hhhhccchhhH
Q 040529 280 LSSQFQVMPLV 290 (806)
Q Consensus 280 ~A~~~~l~~L~ 290 (806)
-|+.|++..+.
T Consensus 80 Ea~fy~i~~~~ 90 (100)
T 1t1d_A 80 EIKFYELGENA 90 (100)
T ss_dssp HHHHTTCCHHH
T ss_pred HHHHcCCCHHH
Confidence 99999998864
No 139
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=84.32 E-value=11 Score=35.99 Aligned_cols=98 Identities=20% Similarity=0.230 Sum_probs=69.9
Q ss_pred ceEEEEecCCCCcccccccCCCCcEEEEEcccCcceeEEE--ECCeE--EEeccCCcccCccccceeeEEEeCCEEEEec
Q 040529 42 DVTVVFRENVGSQHYHYKRDNSPHYTVIIGSNRNRRLKIE--VNGKT--VVDVAGVGLCCSSAFQSYWISIYDGLISIGK 117 (806)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~n~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 117 (806)
++=|+||.. .|....|++-|....|. ..+. .+|.. +++++ .-+.+++.-.+=|...++.|.|=.
T Consensus 82 ~~Gi~fR~~---------~d~~~gY~~~i~~~~~~-~~l~k~~~g~~~~L~~~~--~~~~~g~w~~l~I~~~G~~i~~~v 149 (185)
T 4b1m_A 82 AGALMFRSD---------KDAKNGYLANVDAKHDL-VKFFKFENGAASVIAEYK--TPIDVNKKYHLKTEAEGDRFKIYL 149 (185)
T ss_dssp EEEEEEEEC---------TTSSSEEEEEEETTTTE-EEEEEEETTEEEEEEEEE--CCCCSSCCEEEEEEEETTEEEEEE
T ss_pred eEEEEEEEc---------CCCCCcEEEEEECCCCE-EEEEEEeCCcEEEeeecc--ccCCCCCeEEEEEEEECCEEEEEE
Confidence 456667653 24467899999876543 4443 36653 44443 345667777777888899999877
Q ss_pred -ccCCCcceeEEEeCCCCCcceeEEEeecccccccceeeccc
Q 040529 118 -GRYPFQNLVFQWLDSSPNCSVRYVGLSSWDKHVGYRNVNVL 158 (806)
Q Consensus 118 -~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~gyr~~~~~ 158 (806)
|. .+++..|+. +.=.+|||-+|+..|-|||+.+-
T Consensus 150 nG~-----~v~~~~D~~--~~~G~iGl~~~~~~v~F~ni~V~ 184 (185)
T 4b1m_A 150 DDR-----LVIDAHDSV--FSEGQFGLNVWDATAVFQNVTKE 184 (185)
T ss_dssp TTE-----EEEEEECCS--CCCEEEEEEEEEEEEEEEEEEEE
T ss_pred CCE-----EEEEEECCC--CCCCcEEEEEcCCeEEEEEEEEe
Confidence 54 468999876 55799999999999999999874
No 140
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=83.79 E-value=6.2 Score=43.91 Aligned_cols=88 Identities=9% Similarity=-0.020 Sum_probs=58.6
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecCC-cccceEEEEEEecCCCCeEeeEEeecCcccccCCccceeeecCCCCCcCeE
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDGS-RAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPFR 775 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~~-~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~~~~~~~r 775 (806)
....|++++|+.. ..-+.-.|+-.-. ....+.+.++++.||++|..+..- .+. +...+..|+-. .-|
T Consensus 388 ~~~~~l~idLg~~--~~~n~v~IqE~i~~gqRV~~y~Ve~~~dgg~W~~va~g---tti-G~kri~~f~~v------~ar 455 (478)
T 3ues_A 388 DAAPAITLTLPQP--TTINAIVIEEAIEHGQRIEHLRVTGALPDGTERVLGQA---GTV-GYRRILRFDDV------EVS 455 (478)
T ss_dssp CSSCEEEEEEEEE--EEEEEEEEEECGGGCCCEEEEEEEEECTTSCEEEEEEE---SCC-TTCEEEEEEEE------EEE
T ss_pred CCCeeEEEECCCC--cEEEEEEEeecccCCCceEEEEEEEEeCCCCEEEEEec---ccc-CceEEEEeCCe------eeE
Confidence 3568999999884 3344444553311 234899999999999999988753 122 22344555522 479
Q ss_pred EEEEEEeccCCCCCCCceEEEeceEEe
Q 040529 776 FFRVVLMGPTADAANSWNFCICFLELY 802 (806)
Q Consensus 776 ~fri~q~g~n~~~~~~~~l~l~~~e~~ 802 (806)
|+||+-++... ..+|+.|++|
T Consensus 456 ~VRl~I~~s~~------~p~Ise~~vY 476 (478)
T 3ues_A 456 SVTLHVDGSRL------APMISRAAAV 476 (478)
T ss_dssp EEEEEEEEESS------SCCEEEEEEE
T ss_pred EEEEEEeccCC------CeEEEEEEEE
Confidence 99999886642 2368899988
No 141
>2wn3_A Discoidin-1 subunit A; type-H lectin, cell adhesion, discoidin domain, lectin; HET: NGA GAL 1PG; 1.59A {Dictyostelium discoideum} PDB: 2w94_A* 2wn2_A* 2w95_A*
Probab=83.05 E-value=2.2 Score=43.41 Aligned_cols=91 Identities=12% Similarity=0.140 Sum_probs=52.3
Q ss_pred CCCeeEEEecCC--ceeeEeeeeEeeecC-CcccceEEEEEEecCCCCeEeeEEeecCcccccCC---ccceeeecCCCC
Q 040529 697 HNCTWWMVDIGQ--DHQLMCNYYTLRMDG-SRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHG---QFASWAVIGPNA 770 (806)
Q Consensus 697 ~~nsW~~vd~~~--~~~~~p~~Y~~r~~~-~~~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~---~~~~~~i~~~~~ 770 (806)
..++|+ ||+. .+.+ +.-..+-.+ ......++++++|.||.+|...... ..+.+.. ...+-.+. .
T Consensus 57 d~~qwL--DLg~~~~~~V--tgV~tQG~~~~~~~VtsY~l~yS~dg~~W~~y~~~---~vF~GN~d~~t~v~~~l~---~ 126 (254)
T 2wn3_A 57 DTNQYI--VAGCEVPRTF--MCVALQGRGDADQWVTSYKIRYSLDNVSWFEYRNG---AAVTGVTDRNTVVNHFFD---T 126 (254)
T ss_dssp STTCCE--EEEEEEEEEE--EEEEEECCSSSSCEEEEEEEEEESSSSSCEEGGGG---CCEECCSSSSCCEEEEEE---E
T ss_pred CchheE--EcCCCeEEEE--EEEEEeCCCCCCCceEEEEEEEECCCCcEEEecCC---cEEeccCCCCeeEEEecC---C
Confidence 468999 9887 4333 222222222 2356899999999999999976431 2222111 11222232 1
Q ss_pred CcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 771 LRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 771 ~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
.-.-||+||.=..=+ + ..||. +|+||-
T Consensus 127 pi~ARyvRi~P~~w~--~----~i~lR-~El~Gc 153 (254)
T 2wn3_A 127 PIRARSIAIHPLTWN--G----HISLR-CEFYTQ 153 (254)
T ss_dssp EEEEEEEEEEEEEEE--S----SCEEE-EEEEEC
T ss_pred CcEEEEEEEEEEEec--C----ccEEE-EEeccC
Confidence 224799999877533 2 23433 899984
No 142
>1oq1_A Protein YESU; structural genomics, singleton, PSI, protein structure initi midwest center for structural genomics, MCSG, unknown funct; 1.70A {Bacillus subtilis} SCOP: b.29.1.17
Probab=82.12 E-value=4.7 Score=39.41 Aligned_cols=92 Identities=13% Similarity=0.163 Sum_probs=67.4
Q ss_pred CcEEEEEcc----c--CcceeEEEEC-CeEEEeccCCcc---cCccccceeeEEEeCCEEEEec-ccCCCcceeEEEeCC
Q 040529 64 PHYTVIIGS----N--RNRRLKIEVN-GKTVVDVAGVGL---CCSSAFQSYWISIYDGLISIGK-GRYPFQNLVFQWLDS 132 (806)
Q Consensus 64 ~~~~~~~g~----~--~n~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~ 132 (806)
..|-|=-|| . .|+-+-.+|- |.+++..-+..| ..+..+-+-=|..++|.|+.-. |+ .+|.|+||
T Consensus 113 ~~~yvsYf~~~~~ner~f~TtrlRky~G~~Lv~~~adPLp~~~dan~~Y~i~i~kd~~~v~f~vNg~-----~lF~~~D~ 187 (223)
T 1oq1_A 113 NALHLSYFRRKYAEERAFRTCNLRKSRGFHLAAMGADPLPSPDDADSPYRMKLIKDKGYVHFSINGL-----PILEWMDD 187 (223)
T ss_dssp EEEEEEEEEESSHHHHTSCEEEEEEETTTEEEEEEECCCCCGGGCCSCEEEEEEEETTEEEEEETTE-----EEEEEECC
T ss_pred hheEEeccccccccccccccccccccCCccchhhccCCCCcccCCCCcEEEEEEEeCCEEEEEECCE-----EEEEeeCC
Confidence 558888999 5 3477888875 888644333336 4555444444555588888887 66 56999999
Q ss_pred C----CCcceeEEEeecccccc-cceeeccccC
Q 040529 133 S----PNCSVRYVGLSSWDKHV-GYRNVNVLPL 160 (806)
Q Consensus 133 ~----~~~~~~~~g~~~~~~~~-gyr~~~~~p~ 160 (806)
. |+..=.|+||-++--|| -|||+.|-.+
T Consensus 188 ~~~~g~~~~~G~fGfR~m~~~~~~y~nf~V~~l 220 (223)
T 1oq1_A 188 GSTYGPVLTKGKIGFRQMAPMKAVYRDFAVHQA 220 (223)
T ss_dssp SSSSSSCCCSBEEEEEEETTCEEEEEEEEEEEE
T ss_pred CcccCCCCCCceEEEEecchhhhhccceEEEec
Confidence 6 55889999999999996 9999998644
No 143
>4dxt_A SUN domain-containing protein 2; beta-sandwich, LINC complex, structural protein; 2.22A {Homo sapiens} PDB: 3unp_A 4dxr_A* 4dxs_A* 4fi9_A
Probab=79.27 E-value=31 Score=33.38 Aligned_cols=106 Identities=12% Similarity=0.108 Sum_probs=74.2
Q ss_pred CCeeecCCCCeeEEEecCCceeeEeeeeEeeecC-------C-cccceEEEEEEecCC--CCeEeeEEeecCcccccCCc
Q 040529 690 GPRMEDGHNCTWWMVDIGQDHQLMCNYYTLRMDG-------S-RAYIRYWNFQGSMDG--KSWTNLRVHENDQTMCKHGQ 759 (806)
Q Consensus 690 ~~~~y~~~~nsW~~vd~~~~~~~~p~~Y~~r~~~-------~-~~~lr~W~~~gs~dg--~~W~~l~~~~~~~~l~~~~~ 759 (806)
|.||--...+.++.|.|.. .+.|+.-++.|.. . ++.||...+-|..+. +.|..|-.=+-|.. + ..
T Consensus 80 G~CW~f~g~~g~l~I~Ls~--~I~~~~VtieHi~~~~sp~~~~~SAPKdf~V~g~~~~~~~~~~~Lg~f~Y~~~--~-~~ 154 (198)
T 4dxt_A 80 GNCWAFQGPQGFAVVRLSA--RIRPTAVTLEHVPKALSPNSTISSAPKDFAIFGFDEDLQQEGTLLGKFTYDQD--G-EP 154 (198)
T ss_dssp TCSEEEETTCEEEEEEEEE--EEEEEEEEEECCCGGGSGGGCCTTSBCEEEEEEESSSSCCCCEEEEEEECCTT--S-CS
T ss_pred cceeecCCCcceeeeecCC--eEEEEEEEEEcCchhcccccCcCCCCcEEEEEEEcCCCCCCcEEEEEEEECCC--C-Cc
Confidence 3454222345677788877 6999999999973 1 267999999999864 46887754333321 2 36
Q ss_pred cceeeecCCCCCcCeEEEEEEEeccCCCCCCCceEEEeceEEeee
Q 040529 760 FASWAVIGPNALRPFRFFRVVLMGPTADAANSWNFCICFLELYGY 804 (806)
Q Consensus 760 ~~~~~i~~~~~~~~~r~fri~q~g~n~~~~~~~~l~l~~~e~~G~ 804 (806)
.-+|+++.+ ...+|++++|+-.. |.++. .+-||-.|.++|.
T Consensus 155 ~QtF~l~~~-~~~~~~~V~l~i~S-N~G~~--~~TClYr~RVhG~ 195 (198)
T 4dxt_A 155 IQTFHFQAP-TMATYQVVELRILT-NWGHP--EYTCIYRFRVHGE 195 (198)
T ss_dssp EEEEECSSC-CSCCEEEEEEEECC-BSSCS--SEEEECEEEEEEE
T ss_pred ceEEEeCCC-CCcceeEEEEEEEC-CCCCC--CcEEEEEEEEcCE
Confidence 789999743 34589999988773 44443 5899999999997
No 144
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A
Probab=73.98 E-value=0.66 Score=55.06 Aligned_cols=79 Identities=4% Similarity=0.028 Sum_probs=0.0
Q ss_pred CCCeeEEEecCCceeeEeeeeEeeecCCc--------ccceEEEEEEecCCCCeEeeEEeecCcccccCCccceeeecCC
Q 040529 697 HNCTWWMVDIGQDHQLMCNYYTLRMDGSR--------AYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGP 768 (806)
Q Consensus 697 ~~nsW~~vd~~~~~~~~p~~Y~~r~~~~~--------~~lr~W~~~gs~dg~~W~~l~~~~~~~~l~~~~~~~~~~i~~~ 768 (806)
....|+.||||.. .--+.|.+.+.+.. --.|.+.||+|+|+.+|..++...++..- +..-.++
T Consensus 841 ~~~~wl~vDLg~~--~tI~~~vv~hagaggE~~~~~~~NT~dF~Lq~s~d~~~W~~vd~VtgN~~~-----vTd~~l~-- 911 (937)
T 3gdb_A 841 QLSGSVDIRLTKS--RTVVRWVMDHAGAGGESVNDGLMNTKDFDLYYKDADGEWKLAKEVRGNKAH-----VTDITLD-- 911 (937)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCceEEEECCCc--EEEeEEEEEecccCccccccccccccceEEEEecCCCCeEEeeEeeCCcce-----eEEeecC--
Confidence 3567999999995 44589999987332 23789999999999999999876655421 1111333
Q ss_pred CCCcCeEEEEEEEeccC
Q 040529 769 NALRPFRFFRVVLMGPT 785 (806)
Q Consensus 769 ~~~~~~r~fri~q~g~n 785 (806)
.....||+||.-|.+.
T Consensus 912 -~pv~ARYvRL~Vt~~~ 927 (937)
T 3gdb_A 912 -KPITAQDWRLNVVTSD 927 (937)
T ss_dssp -----------------
T ss_pred -CceeEEEEEEEEecCC
Confidence 2225899999999863
No 145
>4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis}
Probab=75.58 E-value=0.7 Score=43.99 Aligned_cols=94 Identities=21% Similarity=0.223 Sum_probs=64.1
Q ss_pred CCCCcEEEEEcccCcceeEEE--ECCeE--EEeccCCcccCccccceeeEEEeCCEEEEec-ccCCCcceeEEEeCCCCC
Q 040529 61 DNSPHYTVIIGSNRNRRLKIE--VNGKT--VVDVAGVGLCCSSAFQSYWISIYDGLISIGK-GRYPFQNLVFQWLDSSPN 135 (806)
Q Consensus 61 ~~~~~~~~~~g~~~n~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~ 135 (806)
|....|++-|....|+ ..+. .+|.. +++++. -+..++.-.+=|..+++.|.+=. |. .+++..|+.
T Consensus 71 d~~~~Y~~~i~~~~~~-~~l~~~~~G~~~~l~~~~~--~~~~g~w~~l~I~~~G~~i~~~vnG~-----~v~~~~D~~-- 140 (172)
T 4azz_A 71 DAKNGYLANVDAKHDL-VKFFKFENGAASVIAEYKT--PIDVNKKYHLKTEAEGDRFKIYLDDR-----LVIDAHDSV-- 140 (172)
Confidence 4456888888877653 3332 24543 333222 23456655555666688887655 43 457888876
Q ss_pred cceeEEEeecccccccceeeccccCCCCc
Q 040529 136 CSVRYVGLSSWDKHVGYRNVNVLPLTQNH 164 (806)
Q Consensus 136 ~~~~~~g~~~~~~~~gyr~~~~~p~~~~~ 164 (806)
+.=.+|||.+++.+|-|+|+.+.|+.+-|
T Consensus 141 ~~~G~iGl~~~~g~~~f~ni~v~~~~~~~ 169 (172)
T 4azz_A 141 FSEGQFGLNVWDATAVFQNVTKESLEHHH 169 (172)
Confidence 45789999999999999999999998765
No 146
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=46.89 E-value=23 Score=39.85 Aligned_cols=86 Identities=12% Similarity=0.080 Sum_probs=58.9
Q ss_pred eEEEEEcCeeeEEEeeHHHHhcCCHHH-HHhhcC-CCCCCCcceEEeCCCCHHHHHHHHhHHhc-CccccCCCCchhHHH
Q 040529 349 DVNIYVESHGLVAQSHKIILSLWSVPF-AKMFTN-GMSESYSSDVHLRDVSLKAFKIMLEFMYS-GELNIEDSLDFGSLL 425 (806)
Q Consensus 349 DV~l~v~~~~~~~~aHr~ILaa~S~yF-~~mf~~-~~~Es~~~~I~l~~v~~~~f~~lL~fiYt-g~l~i~~~~n~~~~v 425 (806)
-|+|.|+|.. |...+..|...-.-+ ..|+.. .......+++-+ |=++..|+.+|+|+.+ |++.....-. .
T Consensus 53 ~v~lNVgG~~--f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~~----~ 125 (514)
T 2r9r_B 53 RVVINISGLR--FETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVNVP----L 125 (514)
T ss_dssp EEEEEETTEE--EEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTSC----H
T ss_pred EEEEEeCCEE--EEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCccc----H
Confidence 5778899975 999999986532111 111110 111223456666 5699999999999999 9988765433 6
Q ss_pred HHHHHHHHhhCchHHH
Q 040529 426 LQLLILSDQFGVTLLH 441 (806)
Q Consensus 426 ~~Ll~~A~~l~l~~L~ 441 (806)
..+.+-|++|+++++.
T Consensus 126 ~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 126 DIFSEEIRFYELGEEA 141 (514)
T ss_dssp HHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHhcCCCHHH
Confidence 7788999999998764
No 147
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.10 E-value=24 Score=30.12 Aligned_cols=28 Identities=18% Similarity=0.120 Sum_probs=26.2
Q ss_pred HHHHHHHHHhhCchHHHHHHHHHHhhcC
Q 040529 425 LLQLLILSDQFGVTLLHQECCKLLLECF 452 (806)
Q Consensus 425 v~~Ll~~A~~l~l~~L~~~c~~~L~~~l 452 (806)
...++..|+.|+++.|.+.|.+|+.++.
T Consensus 13 Cl~i~~~A~~~~~~~L~~~a~~fi~~nF 40 (105)
T 2eqx_A 13 CLQVMWLADRHSDPELYTAAKHCAKTHL 40 (105)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998754
No 148
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=44.74 E-value=37 Score=38.13 Aligned_cols=77 Identities=10% Similarity=-0.004 Sum_probs=58.1
Q ss_pred EEEEecCCCeEEEeeeeeecccCcccC-C--------CCCCceEEeCCCCHHHHHHHHHhhcc-CcccCCCC-CchhHHH
Q 040529 211 MFFIVGTEEKLVPAHKVILQASGNFPL-S--------LTGEGIVQLQEVIYPILHALLQFIYT-GRTQISEP-LLGPLWA 279 (806)
Q Consensus 211 v~~~v~~~~~~~~aHk~ILaarS~~F~-~--------~~~~~~i~l~~v~~~~f~~lL~fiYt-g~~~i~~~-~~~~ll~ 279 (806)
|+|-|| |+.|...+..|.....-+. . .....++.+ |=+|..|+.+|.|+.| |++..+.+ ....+++
T Consensus 54 v~lNVg--G~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~~ 130 (514)
T 2r9r_B 54 VVINIS--GLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSE 130 (514)
T ss_dssp EEEEET--TEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHHH
T ss_pred EEEEeC--CEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCcccHHHHHH
Confidence 788897 8999999998875432221 1 123456666 6799999999999999 99887655 3567889
Q ss_pred hhhhccchhhH
Q 040529 280 LSSQFQVMPLV 290 (806)
Q Consensus 280 ~A~~~~l~~L~ 290 (806)
-|+.|++.++.
T Consensus 131 E~~f~~i~~~~ 141 (514)
T 2r9r_B 131 EIRFYELGEEA 141 (514)
T ss_dssp HHHHTTCCHHH
T ss_pred HHHhcCCCHHH
Confidence 99999998764
No 149
>2lg7_A Uncharacterized protein; APSY spectroscopy, structural genomics, joint center for STR genomics, JCSG, calcium-binding protein; NMR {Parabacteroides distasonis} PDB: 2lge_A
Probab=44.12 E-value=12 Score=30.79 Aligned_cols=45 Identities=20% Similarity=0.240 Sum_probs=34.9
Q ss_pred CCCCcccccccCCCCcEEEEEcccCcceeEEE-----------ECCeEEEeccCCcccCccccc
Q 040529 50 NVGSQHYHYKRDNSPHYTVIIGSNRNRRLKIE-----------VNGKTVVDVAGVGLCCSSAFQ 102 (806)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~g~~~n~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 102 (806)
.||.+ +.|||+-|--.+.-|+-|. |||.+-.+.+.|-|+|..|..
T Consensus 5 epggk--------gamyevtieqsgdfrsfiksvvvvangtqlkdgatgeslaspvilsdeela 60 (129)
T 2lg7_A 5 EPGGK--------GAMYEVTIEQSGDFRSFIKSVVVVANGTQLKDGATGESLASPVILSDEELA 60 (129)
T ss_dssp CCSCC--------CCCEEEEEEEEESCTTSEECCBCCCSSSCEECTTTCCEECSCCBCCGGGCC
T ss_pred CCCCc--------ceeEEEEEeccCChhhheeEEEEEecCcCcccCccCccccCceEecchhhe
Confidence 57777 8999999999888888885 355566677788888766653
No 150
>2y9w_C Lectin-like fold protein, polyphenol oxidase; oxidoreductase, copper-containing, pigmentation, type-3 COPP protein; HET: PGE; 2.30A {Agaricus bisporus} PDB: 2y9x_E
Probab=29.93 E-value=1.4e+02 Score=25.17 Aligned_cols=70 Identities=19% Similarity=0.349 Sum_probs=44.3
Q ss_pred eeecCCCCeeEEEecCCceeeEeeeeEeeecCCcccceEEEEEEecCCCC-eEeeEEeecCcccccCCccceeeecCCCC
Q 040529 692 RMEDGHNCTWWMVDIGQDHQLMCNYYTLRMDGSRAYIRYWNFQGSMDGKS-WTNLRVHENDQTMCKHGQFASWAVIGPNA 770 (806)
Q Consensus 692 ~~y~~~~nsW~~vd~~~~~~~~p~~Y~~r~~~~~~~lr~W~~~gs~dg~~-W~~l~~~~~~~~l~~~~~~~~~~i~~~~~ 770 (806)
+.++--.|.|..+.-|.. . +.-..-......|.+++|.+|+. |.-+. .+.+.-+-|.|+..+.
T Consensus 63 kifnmgsnnwasvsrgnt-v-------lgvsefdgqtckwsieysgngeefwirvp--------reggggavwtikpass 126 (150)
T 2y9w_C 63 KIFNMGSNNWASVSRGNT-V-------LGVSEFDGQTCKWSIEYSGNGEEFWIRVP--------REGGGGAVWTIKPASS 126 (150)
T ss_dssp EEEETTTCCEEEECTTSB-E-------EEESSCCTTTSCBEEEECSSTTEEEEECC--------CTTSCCCEEEEEESSS
T ss_pred eEEeccCCceeeeecCcE-E-------EeeeecCCceEEEEEEEcCCCeEEEEECc--------ccCCCeeEEEeccccc
Confidence 446666788888887763 1 11112224567899999999987 66433 3556668999984444
Q ss_pred CcCeEEE
Q 040529 771 LRPFRFF 777 (806)
Q Consensus 771 ~~~~r~f 777 (806)
..|-.-|
T Consensus 127 qgpttvf 133 (150)
T 2y9w_C 127 QGPTTVF 133 (150)
T ss_dssp SCCEEEE
T ss_pred CCCeeeh
Confidence 4454433
Done!