BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040532
(436 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 179/309 (57%), Gaps = 8/309 (2%)
Query: 92 ERSKKKEVDQLPLFSFSSVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRS 151
E + + QL FS + A++ FS+ N LG GGFG VYKG L G +AVKRL
Sbjct: 15 EEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEER 74
Query: 152 EQGLR-EMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD-PTKRI 209
QG + + E +I+ H+NL+RL G C+ E++L+Y YM N S+ L + P +
Sbjct: 75 XQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 134
Query: 210 LLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGG 269
LDW R +I G A+GL YLH + +IIHRD+KA+NILLD++ + DFG+A++
Sbjct: 135 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 194
Query: 270 NELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYR---TDS 326
+ + + GT G+++PEY G S K+DVF +GV+LLE+++G++ L R D
Sbjct: 195 KDXHVXXA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 253
Query: 327 LNLLGYVWDLWTSNRTLELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVV 386
+ LL +V L + LE + D L+ Y ++V + + +ALLC Q S +RP M++VV
Sbjct: 254 VMLLDWVKGL-LKEKKLEALVDVDLQGNYKDEEV-EQLIQVALLCTQSSPMERPKMSEVV 311
Query: 387 SMLTNEAAA 395
ML + A
Sbjct: 312 RMLEGDGLA 320
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 197 bits (502), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 179/309 (57%), Gaps = 8/309 (2%)
Query: 92 ERSKKKEVDQLPLFSFSSVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRL-SGR 150
E + + QL FS + A++ F + N LG GGFG VYKG L G +AVKRL R
Sbjct: 7 EEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEER 66
Query: 151 SEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD-PTKRI 209
++ G + + E +I+ H+NL+RL G C+ E++L+Y YM N S+ L + P +
Sbjct: 67 TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 126
Query: 210 LLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGG 269
LDW R +I G A+GL YLH + +IIHRD+KA+NILLD++ + DFG+A++
Sbjct: 127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186
Query: 270 NELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYR---TDS 326
+ + + G G+++PEY G S K+DVF +GV+LLE+++G++ L R D
Sbjct: 187 KDXHVXXA-VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 245
Query: 327 LNLLGYVWDLWTSNRTLELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVV 386
+ LL +V L + LE + D L+ Y ++V + + +ALLC Q S +RP M++VV
Sbjct: 246 VMLLDWVKGL-LKEKKLEALVDVDLQGNYKDEEV-EQLIQVALLCTQSSPMERPKMSEVV 303
Query: 387 SMLTNEAAA 395
ML + A
Sbjct: 304 RMLEGDGLA 312
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 173/281 (61%), Gaps = 17/281 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKN 172
ATN F +G G FG VYKGVLR G ++A+KR + S QG+ E + E ++ +H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD---PTKRILLDWVTRVQIIEGIAQGLLY 229
LV L+G C +++E ILIY+YM N +L L+ PT + + W R++I G A+GL Y
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT--MSMSWEQRLEICIGAARGLHY 154
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNEL-QANTSRIV-GTYGYMS 287
LH + IIHRD+K+ NILLD++ PKI+DFG+++ G EL Q + +V GT GY+
Sbjct: 155 LHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTLGYID 209
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSGKKN--TGLYRTDSLNLLGYVWDLWTSNRTLEL 345
PEY ++G + KSDV+SFGV+L E++ + L R + +NL + + +N LE
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR-EMVNLAEWAVES-HNNGQLEQ 267
Query: 346 IDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVV 386
I DP L D+ + L ++ + A+ C+ S++DRP+M DV+
Sbjct: 268 IVDPNLADKIRPES-LRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 173/281 (61%), Gaps = 17/281 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKN 172
ATN F +G G FG VYKGVLR G ++A+KR + S QG+ E + E ++ +H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD---PTKRILLDWVTRVQIIEGIAQGLLY 229
LV L+G C +++E ILIY+YM N +L L+ PT + + W R++I G A+GL Y
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT--MSMSWEQRLEICIGAARGLHY 154
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNEL-QANTSRIV-GTYGYMS 287
LH + IIHRD+K+ NILLD++ PKI+DFG+++ G EL Q + +V GT GY+
Sbjct: 155 LHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKGTLGYID 209
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSGKKN--TGLYRTDSLNLLGYVWDLWTSNRTLEL 345
PEY ++G + KSDV+SFGV+L E++ + L R + +NL + + +N LE
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR-EMVNLAEWAVES-HNNGQLEQ 267
Query: 346 IDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVV 386
I DP L D+ + L ++ + A+ C+ S++DRP+M DV+
Sbjct: 268 IVDPNLADKIRPES-LRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 159/303 (52%), Gaps = 22/303 (7%)
Query: 105 FSFSSVSTATNTFSD------TNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREM 158
FSF + TN F + NK+GEGGFG VYKG + +AVK+L+ + E+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 159 KN----EASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL--DFFLFDPTKRILLD 212
K E V+AK QH+NLV LLG D D+ L+Y YMPN SL D T L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LS 131
Query: 213 WVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNEL 272
W R +I +G A G+ +LH+ IHRD+K++NILLD+ KISDFG+AR
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 273 QANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGY 332
SRIVGT YM+PE AL G + KSD++SFGV+LLEI++G +R L L
Sbjct: 189 TVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247
Query: 333 VWDLWTSNRTLELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNE 392
+ ID + + + +S + + ++A C+ E + RP + V +L
Sbjct: 248 EEIEDEEKTIEDYIDKKMNDADSTSVEAMY---SVASQCLHEKKNKRPDIKKVQQLLQEM 304
Query: 393 AAA 395
A+
Sbjct: 305 TAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 158/303 (52%), Gaps = 22/303 (7%)
Query: 105 FSFSSVSTATNTFSD------TNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREM 158
FSF + TN F + NK+GEGGFG VYKG + +AVK+L+ + E+
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 159 KN----EASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL--DFFLFDPTKRILLD 212
K E V+AK QH+NLV LLG D D+ L+Y YMPN SL D T L
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LS 125
Query: 213 WVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNEL 272
W R +I +G A G+ +LH+ IHRD+K++NILLD+ KISDFG+AR
Sbjct: 126 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 273 QANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGY 332
RIVGT YM+PE AL G + KSD++SFGV+LLEI++G +R L L
Sbjct: 183 XVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 241
Query: 333 VWDLWTSNRTLELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNE 392
+ ID + + + +S + + ++A C+ E + RP + V +L
Sbjct: 242 EEIEDEEKTIEDYIDKKMNDADSTSVEAMY---SVASQCLHEKKNKRPDIKKVQQLLQEM 298
Query: 393 AAA 395
A+
Sbjct: 299 TAS 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 158/303 (52%), Gaps = 22/303 (7%)
Query: 105 FSFSSVSTATNTFSD------TNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREM 158
FSF + TN F + NK+GEGGFG VYKG + +AVK+L+ + E+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 159 KN----EASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL--DFFLFDPTKRILLD 212
K E V+AK QH+NLV LLG D D+ L+Y YMPN SL D T L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LS 131
Query: 213 WVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNEL 272
W R +I +G A G+ +LH+ IHRD+K++NILLD+ KISDFG+AR
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 273 QANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGY 332
RIVGT YM+PE AL G + KSD++SFGV+LLEI++G +R L L
Sbjct: 189 TVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247
Query: 333 VWDLWTSNRTLELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNE 392
+ ID + + + +S + + ++A C+ E + RP + V +L
Sbjct: 248 EEIEDEEKTIEDYIDKKMNDADSTSVEAMY---SVASQCLHEKKNKRPDIKKVQQLLQEM 304
Query: 393 AAA 395
A+
Sbjct: 305 TAS 307
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 153/303 (50%), Gaps = 22/303 (7%)
Query: 105 FSFSSVSTATNTFSD------TNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREM 158
FSF + TN F + NK GEGGFG VYKG + +AVK+L+ + E+
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 159 KN----EASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL--DFFLFDPTKRILLD 212
K E V AK QH+NLV LLG D D+ L+Y Y PN SL D T L
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP--LS 122
Query: 213 WVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNEL 272
W R +I +G A G+ +LH+ IHRD+K++NILLD+ KISDFG+AR
Sbjct: 123 WHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 273 QANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGY 332
SRIVGT Y +PE AL G + KSD++SFGV+LLEI++G +R L L
Sbjct: 180 XVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 238
Query: 333 VWDLWTSNRTLELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNE 392
+ ID ++ S V Y ++A C+ E + RP + V +L
Sbjct: 239 EEIEDEEKTIEDYIDKKX--NDADSTSVEAXY-SVASQCLHEKKNKRPDIKKVQQLLQEX 295
Query: 393 AAA 395
A+
Sbjct: 296 TAS 298
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 135/270 (50%), Gaps = 24/270 (8%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+LG G FG V+ G ++AVK L + ++ EA+++ +QH LVRL
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 181 IDKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
++ +I EYM SL DF D ++LL + IA+G+ Y+ R I
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIE---RKNYI 132
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL+A+N+L+ + + KI+DFG+AR+ NE A + +PE G F+IK
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIK 191
Query: 300 SDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSKQ 359
SDV+SFG+LL EIV+ K RT++ + L R + + P DE
Sbjct: 192 SDVWSFGILLYEIVTYGKIPYPGRTNADVMTA----LSQGYRMPRVENCP---DE----- 239
Query: 360 VLLRYVNIALLCVQESADDRPTMNDVVSML 389
+I +C +E A++RPT + + S+L
Sbjct: 240 ----LYDIMKMCWKEKAEERPTFDYLQSVL 265
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 115/211 (54%), Gaps = 31/211 (14%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSE----QGLREMKNEASVIAKVQHKNLVRLLG 178
+G GGFG VY+ GDE+AVK + Q + ++ EA + A ++H N++ L G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQGLLYLHQYS 234
C+ + L+ E+ L+ L KRI L++W + IA+G+ YLH +
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVNWAVQ------IARGMNYLHDEA 125
Query: 235 RVRIIHRDLKASNILL-----DKDMNP---KISDFGMARICGGNELQANTS-RIVGTYGY 285
V IIHRDLK+SNIL+ + D++ KI+DFG+AR E T G Y +
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAW 180
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
M+PE +FS SDV+S+GVLL E+++G+
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 136/273 (49%), Gaps = 32/273 (11%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG G FG V+ G ++AVK L + ++ EA+++ +QH LVRL
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ +I E+M SL DF D ++LL + IA+G+ Y+ R IH
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIE---RKNYIH 132
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+N+L+ + + KI+DFG+AR+ NE A + +PE G F+IKS
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIKS 191
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLL--GYVWDLWTSNRTLELIDDPVLEDEYS 356
+V+SFG+LL EIV+ K G D ++ L GY R + + P DE
Sbjct: 192 NVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGY--------RMPRMENCP---DE-- 238
Query: 357 SKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
+I +C +E A++RPT + + S+L
Sbjct: 239 -------LYDIMKMCWKEKAEERPTFDYLQSVL 264
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 143/290 (49%), Gaps = 29/290 (10%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
T +LG G FG V+ G ++AVK L + EA+++ ++QH+ LVR
Sbjct: 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
L + ++ +I EYM N SL FL P+ I L + + IA+G+ ++ + +
Sbjct: 73 LY-AVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERN- 129
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
IHRDL+A+NIL+ ++ KI+DFG+AR+ NE A + +PE G
Sbjct: 130 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGT 186
Query: 296 FSIKSDVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELI-DDPVLE 352
F+IKSDV+SFG+LL EIV+ + G+ + + L R ++ D E
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPDNCPE 237
Query: 353 DEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQP 402
+ Y L+R LC +E +DRPT + + S+L + A QP
Sbjct: 238 ELYQ----LMR------LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 277
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 143/290 (49%), Gaps = 29/290 (10%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
T +LG G FG V+ G ++AVK L S EA+++ ++QH+ LVR
Sbjct: 20 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR 78
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
L + ++ +I EYM N SL FL P+ I L + + IA+G+ ++ + +
Sbjct: 79 LY-AVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERN- 135
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
IHRDL+A+NIL+ ++ KI+DFG+AR+ NE A + +PE G
Sbjct: 136 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGT 192
Query: 296 FSIKSDVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELI-DDPVLE 352
F+IKSDV+SFG+LL EIV+ + G+ + + L R ++ D E
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPDNCPE 243
Query: 353 DEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQP 402
+ Y L+R LC +E +DRPT + + S+L + A QP
Sbjct: 244 ELYQ----LMR------LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 283
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 143/290 (49%), Gaps = 29/290 (10%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
T +LG G FG V+ G ++AVK L + EA+++ ++QH+ LVR
Sbjct: 24 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 82
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
L + ++ +I EYM N SL FL P+ I L + + IA+G+ ++ + +
Sbjct: 83 LY-AVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERN- 139
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
IHRDL+A+NIL+ ++ KI+DFG+AR+ NE A + +PE G
Sbjct: 140 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGT 196
Query: 296 FSIKSDVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELI-DDPVLE 352
F+IKSDV+SFG+LL EIV+ + G+ + + L R ++ D E
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPDNCPE 247
Query: 353 DEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQP 402
+ Y L+R LC +E +DRPT + + S+L + A QP
Sbjct: 248 ELYQ----LMR------LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 287
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 143/290 (49%), Gaps = 29/290 (10%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
T +LG G FG V+ G ++AVK L + EA+++ ++QH+ LVR
Sbjct: 22 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 80
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
L + ++ +I EYM N SL FL P+ I L + + IA+G+ ++ + +
Sbjct: 81 LY-AVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERN- 137
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
IHRDL+A+NIL+ ++ KI+DFG+AR+ NE A + +PE G
Sbjct: 138 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGT 194
Query: 296 FSIKSDVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELI-DDPVLE 352
F+IKSDV+SFG+LL EIV+ + G+ + + L R ++ D E
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPDNCPE 245
Query: 353 DEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQP 402
+ Y L+R LC +E +DRPT + + S+L + A QP
Sbjct: 246 ELYQ----LMR------LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 285
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 143/290 (49%), Gaps = 29/290 (10%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
T +LG G FG V+ G ++AVK L + EA+++ ++QH+ LVR
Sbjct: 23 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 81
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
L + ++ +I EYM N SL FL P+ I L + + IA+G+ ++ + +
Sbjct: 82 LY-AVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERN- 138
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
IHRDL+A+NIL+ ++ KI+DFG+AR+ NE A + +PE G
Sbjct: 139 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGT 195
Query: 296 FSIKSDVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELI-DDPVLE 352
F+IKSDV+SFG+LL EIV+ + G+ + + L R ++ D E
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPDNCPE 246
Query: 353 DEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQP 402
+ Y L+R LC +E +DRPT + + S+L + A QP
Sbjct: 247 ELYQ----LMR------LCWKERPEDRPTFDYLRSVLEDFFTATEGQFQP 286
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 140/279 (50%), Gaps = 29/279 (10%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
T +LG G FG V+ G ++AVK L + EA+++ ++QH+ LVR
Sbjct: 16 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 74
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
L + ++ +I EYM N SL FL P+ I L + + IA+G+ ++ + +
Sbjct: 75 LYAV-VTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERN- 131
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
IHRDL+A+NIL+ ++ KI+DFG+AR+ NE A + +PE G
Sbjct: 132 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGT 188
Query: 296 FSIKSDVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELI-DDPVLE 352
F+IKSDV+SFG+LL EIV+ + G+ + + L R ++ D E
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPDNCPE 239
Query: 353 DEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTN 391
+ Y L+R LC +E +DRPT + + S+L +
Sbjct: 240 ELYQ----LMR------LCWKERPEDRPTFDYLRSVLED 268
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 140/279 (50%), Gaps = 29/279 (10%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
T +LG G FG V+ G ++AVK L + EA+++ ++QH+ LVR
Sbjct: 20 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
L + ++ +I EYM N SL FL P+ I L + + IA+G+ ++ + +
Sbjct: 79 LYAV-VTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERN- 135
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
IHRDL+A+NIL+ ++ KI+DFG+AR+ NE A + +PE G
Sbjct: 136 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGT 192
Query: 296 FSIKSDVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELI-DDPVLE 352
F+IKSDV+SFG+LL EIV+ + G+ + + L R ++ D E
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPDNCPE 243
Query: 353 DEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTN 391
+ Y L+R LC +E +DRPT + + S+L +
Sbjct: 244 ELYQ----LMR------LCWKERPEDRPTFDYLRSVLED 272
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 140/279 (50%), Gaps = 29/279 (10%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
T +LG G FG V+ G ++AVK L S EA+++ ++QH+ LVR
Sbjct: 19 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVR 77
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
L + ++ +I EYM N SL FL P+ I L + + IA+G+ ++ + +
Sbjct: 78 LYAV-VTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERN- 134
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
IHRDL+A+NIL+ ++ KI+DFG+AR+ NE A + +PE G
Sbjct: 135 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGT 191
Query: 296 FSIKSDVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELI-DDPVLE 352
F+IKSDV+SFG+LL EIV+ + G+ + + L R ++ D E
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPDNCPE 242
Query: 353 DEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTN 391
+ Y L+R LC +E +DRPT + + S+L +
Sbjct: 243 ELYQ----LMR------LCWKERPEDRPTFDYLRSVLED 271
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 140/279 (50%), Gaps = 29/279 (10%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
T +LG G FG V+ G ++AVK L + EA+++ ++QH+ LVR
Sbjct: 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
L + ++ +I EYM N SL FL P+ I L + + IA+G+ ++ + +
Sbjct: 73 LYAV-VTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERN- 129
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
IHRDL+A+NIL+ ++ KI+DFG+AR+ NE A + +PE G
Sbjct: 130 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGT 186
Query: 296 FSIKSDVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELI-DDPVLE 352
F+IKSDV+SFG+LL EIV+ + G+ + + L R ++ D E
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPDNCPE 237
Query: 353 DEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTN 391
+ Y L+R LC +E +DRPT + + S+L +
Sbjct: 238 ELYQ----LMR------LCWKERPEDRPTFDYLRSVLED 266
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 140/279 (50%), Gaps = 29/279 (10%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
T +LG G FG V+ G ++AVK L + EA+++ ++QH+ LVR
Sbjct: 9 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 67
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
L + ++ +I EYM N SL FL P+ I L + + IA+G+ ++ + +
Sbjct: 68 LYAV-VTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERN- 124
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
IHRDL+A+NIL+ ++ KI+DFG+AR+ NE A + +PE G
Sbjct: 125 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGT 181
Query: 296 FSIKSDVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELI-DDPVLE 352
F+IKSDV+SFG+LL EIV+ + G+ + + L R ++ D E
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPDNCPE 232
Query: 353 DEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTN 391
+ Y L+R LC +E +DRPT + + S+L +
Sbjct: 233 ELYQ----LMR------LCWKERPEDRPTFDYLRSVLED 261
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 140/279 (50%), Gaps = 29/279 (10%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
T +LG G FG V+ G ++AVK L + EA+++ ++QH+ LVR
Sbjct: 15 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 73
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
L + ++ +I EYM N SL FL P+ I L + + IA+G+ ++ + +
Sbjct: 74 LYAV-VTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERN- 130
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
IHRDL+A+NIL+ ++ KI+DFG+AR+ NE A + +PE G
Sbjct: 131 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGT 187
Query: 296 FSIKSDVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELI-DDPVLE 352
F+IKSDV+SFG+LL EIV+ + G+ + + L R ++ D E
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPDNCPE 238
Query: 353 DEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTN 391
+ Y L+R LC +E +DRPT + + S+L +
Sbjct: 239 ELYQ----LMR------LCWKERPEDRPTFDYLRSVLED 267
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 140/279 (50%), Gaps = 29/279 (10%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
T +LG G FG V+ G ++AVK L + EA+++ ++QH+ LVR
Sbjct: 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
L + ++ +I EYM N SL FL P+ I L + + IA+G+ ++ + +
Sbjct: 73 LYAV-VTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERN- 129
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
IHRDL+A+NIL+ ++ KI+DFG+AR+ NE A + +PE G
Sbjct: 130 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGT 186
Query: 296 FSIKSDVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELI-DDPVLE 352
F+IKSDV+SFG+LL EIV+ + G+ + + L R ++ D E
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPDNCPE 237
Query: 353 DEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTN 391
+ Y L+R LC +E +DRPT + + S+L +
Sbjct: 238 ELYQ----LMR------LCWKERPEDRPTFDYLRSVLED 266
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 159/326 (48%), Gaps = 39/326 (11%)
Query: 75 LKANNVNIELPLNSKLIERSKKKEVDQLPLFSFSSVSTATNTFSDTNKLGEGGFGPVYKG 134
L N +++LP ++ ++ Q + F+ ATN D +G G FG V G
Sbjct: 7 LHFGNGHLKLPGLRTFVDPHTFEDPTQT-VHEFAKELDATNISID-KVVGAGEFGEVCSG 64
Query: 135 VLR----KGDEIAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILI 189
L+ K +A+K L G +E+ R+ EAS++ + H N++RL G +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 190 YEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNIL 249
EYM N SLD FL + + + V ++ GIA G+ YL S + +HRDL A NIL
Sbjct: 125 TEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL 179
Query: 250 LDKDMNPKISDFGMARICGGNELQANTSRIVG-TYGYMSPEYALEGIFSIKSDVFSFGVL 308
++ ++ K+SDFG+AR+ + A T+R + SPE F+ SDV+S+G++
Sbjct: 180 INSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 309 LLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDD-----PVLEDEYSSKQVLLR 363
L E++S + W++ ++ ++ +D+ P ++ + Q++L
Sbjct: 240 LWEVMSYGERP-------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 364 YVNIALLCVQESADDRPTMNDVVSML 389
C Q+ ++RP +VS+L
Sbjct: 286 -------CWQKDRNNRPKFEQIVSIL 304
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 159/326 (48%), Gaps = 39/326 (11%)
Query: 75 LKANNVNIELPLNSKLIERSKKKEVDQLPLFSFSSVSTATNTFSDTNKLGEGGFGPVYKG 134
L N +++LP ++ ++ Q + F+ ATN D +G G FG V G
Sbjct: 7 LHFGNGHLKLPGLRTFVDPHTYEDPTQT-VHEFAKELDATNISID-KVVGAGEFGEVCSG 64
Query: 135 VLR----KGDEIAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILI 189
L+ K +A+K L G +E+ R+ EAS++ + H N++RL G +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 190 YEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNIL 249
EYM N SLD FL + + + V ++ GIA G+ YL S + +HRDL A NIL
Sbjct: 125 TEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL 179
Query: 250 LDKDMNPKISDFGMARICGGNELQANTSRIVG-TYGYMSPEYALEGIFSIKSDVFSFGVL 308
++ ++ K+SDFG++R+ + A T+R + SPE F+ SDV+S+G++
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 309 LLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDD-----PVLEDEYSSKQVLLR 363
L E++S + W++ ++ ++ +D+ P ++ + Q++L
Sbjct: 240 LWEVMSYGERP-------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 364 YVNIALLCVQESADDRPTMNDVVSML 389
C Q+ ++RP +VS+L
Sbjct: 286 -------CWQKDRNNRPKFEQIVSIL 304
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 248
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 303
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 362
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 412
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 413 --------LMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPG 449
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 159/326 (48%), Gaps = 39/326 (11%)
Query: 75 LKANNVNIELPLNSKLIERSKKKEVDQLPLFSFSSVSTATNTFSDTNKLGEGGFGPVYKG 134
L N +++LP ++ ++ Q + F+ ATN D +G G FG V G
Sbjct: 7 LHFGNGHLKLPGLRTFVDPHTFEDPTQT-VHEFAKELDATNISID-KVVGAGEFGEVCSG 64
Query: 135 VLR----KGDEIAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILI 189
L+ K +A+K L G +E+ R+ EAS++ + H N++RL G +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 190 YEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNIL 249
EYM N SLD FL + + + V ++ GIA G+ YL S + +HRDL A NIL
Sbjct: 125 TEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGFVHRDLAARNIL 179
Query: 250 LDKDMNPKISDFGMARICGGNELQANTSRIVG-TYGYMSPEYALEGIFSIKSDVFSFGVL 308
++ ++ K+SDFG++R+ + A T+R + SPE F+ SDV+S+G++
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 309 LLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDD-----PVLEDEYSSKQVLLR 363
L E++S + W++ ++ ++ +D+ P ++ + Q++L
Sbjct: 240 LWEVMSYGERP-------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 364 YVNIALLCVQESADDRPTMNDVVSML 389
C Q+ ++RP +VS+L
Sbjct: 286 -------CWQKDRNNRPKFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 159/326 (48%), Gaps = 39/326 (11%)
Query: 75 LKANNVNIELPLNSKLIERSKKKEVDQLPLFSFSSVSTATNTFSDTNKLGEGGFGPVYKG 134
L N +++LP ++ ++ Q + F+ ATN D +G G FG V G
Sbjct: 5 LHFGNGHLKLPGLRTYVDPHTYEDPTQT-VHEFAKELDATNISID-KVVGAGEFGEVCSG 62
Query: 135 VLR----KGDEIAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILI 189
L+ K +A+K L G +E+ R+ EAS++ + H N++RL G +++
Sbjct: 63 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 122
Query: 190 YEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNIL 249
EYM N SLD FL + + + V ++ GIA G+ YL S + +HRDL A NIL
Sbjct: 123 TEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL 177
Query: 250 LDKDMNPKISDFGMARICGGNELQANTSRIVG-TYGYMSPEYALEGIFSIKSDVFSFGVL 308
++ ++ K+SDFG++R+ + A T+R + SPE F+ SDV+S+G++
Sbjct: 178 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 237
Query: 309 LLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDD-----PVLEDEYSSKQVLLR 363
L E++S + W++ ++ ++ +D+ P ++ + Q++L
Sbjct: 238 LWEVMSYGERP-------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLMLD 283
Query: 364 YVNIALLCVQESADDRPTMNDVVSML 389
C Q+ ++RP +VS+L
Sbjct: 284 -------CWQKDRNNRPKFEQIVSIL 302
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 248
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 303
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 362
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 412
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 413 --------LMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 449
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 159/326 (48%), Gaps = 39/326 (11%)
Query: 75 LKANNVNIELPLNSKLIERSKKKEVDQLPLFSFSSVSTATNTFSDTNKLGEGGFGPVYKG 134
L N +++LP ++ ++ Q + F+ ATN D +G G FG V G
Sbjct: 7 LHFGNGHLKLPGLRTYVDPHTYEDPTQT-VHEFAKELDATNISID-KVVGAGEFGEVCSG 64
Query: 135 VLR----KGDEIAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILI 189
L+ K +A+K L G +E+ R+ EAS++ + H N++RL G +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 190 YEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNIL 249
EYM N SLD FL + + + V ++ GIA G+ YL S + +HRDL A NIL
Sbjct: 125 TEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL 179
Query: 250 LDKDMNPKISDFGMARICGGNELQANTSRIVG-TYGYMSPEYALEGIFSIKSDVFSFGVL 308
++ ++ K+SDFG++R+ + A T+R + SPE F+ SDV+S+G++
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 309 LLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDD-----PVLEDEYSSKQVLLR 363
L E++S + W++ ++ ++ +D+ P ++ + Q++L
Sbjct: 240 LWEVMSYGERP-------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 364 YVNIALLCVQESADDRPTMNDVVSML 389
C Q+ ++RP +VS+L
Sbjct: 286 -------CWQKDRNNRPKFEQIVSIL 304
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLY-AVV 331
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 386
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 445
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 495
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 496 --------LMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPG 532
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 75
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 130
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 189
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 239
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 240 --------LMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 276
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 159/326 (48%), Gaps = 39/326 (11%)
Query: 75 LKANNVNIELPLNSKLIERSKKKEVDQLPLFSFSSVSTATNTFSDTNKLGEGGFGPVYKG 134
L N +++LP ++ ++ Q + F+ ATN D +G G FG V G
Sbjct: 7 LHFGNGHLKLPGLRTFVDPHTFEDPTQT-VHEFAKELDATNISID-KVVGAGEFGEVCSG 64
Query: 135 VLR----KGDEIAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILI 189
L+ K +A+K L G +E+ R+ EAS++ + H N++RL G +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 190 YEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNIL 249
EYM N SLD FL + + + V ++ GIA G+ YL S + +HRDL A NIL
Sbjct: 125 TEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL 179
Query: 250 LDKDMNPKISDFGMARICGGNELQANTSRIVG-TYGYMSPEYALEGIFSIKSDVFSFGVL 308
++ ++ K+SDFG++R+ + A T+R + SPE F+ SDV+S+G++
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 309 LLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDD-----PVLEDEYSSKQVLLR 363
L E++S + W++ ++ ++ +D+ P ++ + Q++L
Sbjct: 240 LWEVMSYGERP-------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 364 YVNIALLCVQESADDRPTMNDVVSML 389
C Q+ ++RP +VS+L
Sbjct: 286 -------CWQKDRNNRPKFEQIVSIL 304
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 248
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 303
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 362
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 412
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 413 --------LMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQPG 449
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 135/286 (47%), Gaps = 31/286 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
+LG G FG V+ G ++A+K L + EA ++ K++H LV+L +
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLY-AVV 73
Query: 182 DKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHR 241
++ ++ EYM SL FL D R L V + +A G+ Y+ R+ IHR
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKDGEGRAL-KLPNLVDMAAQVAAGMAYIE---RMNYIHR 129
Query: 242 DLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSD 301
DL+++NIL+ + KI+DFG+AR+ NE A + +PE AL G F+IKSD
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSD 188
Query: 302 VFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDD----PVLEDEYSS 357
V+SFG+LL E+V+ G +N + LE ++ P +D S
Sbjct: 189 VWSFGILLTELVT----KGRVPYPGMN----------NREVLEQVERGYRMPCPQDCPIS 234
Query: 358 KQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
L+ + C ++ ++RPT + S L + A P QP
Sbjct: 235 LHELM------IHCWKKDPEERPTFEYLQSFLEDYFTATEPQYQPG 274
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 147/297 (49%), Gaps = 38/297 (12%)
Query: 104 LFSFSSVSTATNTFSDTNKLGEGGFGPVYKGVLR----KGDEIAVKRLS-GRSEQGLREM 158
+ F+ ATN D +G G FG V G L+ K +A+K L G +E+ R+
Sbjct: 35 VHEFAKELDATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 159 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQ 218
EAS++ + H N++RL G +++ EYM N SLD FL + + + V
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVG 151
Query: 219 IIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
++ GIA G+ YL S + +HRDL A NIL++ ++ K+SDFG++R+ + A T+R
Sbjct: 152 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 279 IVG-TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLW 337
+ SPE F+ SDV+S+G++L E++S + W++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-------------YWEM- 254
Query: 338 TSNRTLELIDD-----PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
++ ++ +D+ P ++ + Q++L C Q+ ++RP +VS+L
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLD-------CWQKDRNNRPKFEQIVSIL 304
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 158/326 (48%), Gaps = 39/326 (11%)
Query: 75 LKANNVNIELPLNSKLIERSKKKEVDQLPLFSFSSVSTATNTFSDTNKLGEGGFGPVYKG 134
L N +++LP ++ ++ Q + F+ ATN D +G G FG V G
Sbjct: 7 LHFGNGHLKLPGLRTFVDPHTFEDPTQT-VHEFAKELDATNISID-KVVGAGEFGEVCSG 64
Query: 135 VLR----KGDEIAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILI 189
L+ K +A+K L G +E+ R+ EAS++ + H N++RL G +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 190 YEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNIL 249
EYM N SLD FL + + + V ++ GIA G+ YL S + +HRDL A NIL
Sbjct: 125 TEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL 179
Query: 250 LDKDMNPKISDFGMARICGGNELQANTSRIVG-TYGYMSPEYALEGIFSIKSDVFSFGVL 308
++ ++ K+SDFG+ R+ + A T+R + SPE F+ SDV+S+G++
Sbjct: 180 INSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 309 LLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDD-----PVLEDEYSSKQVLLR 363
L E++S + W++ ++ ++ +D+ P ++ + Q++L
Sbjct: 240 LWEVMSYGERP-------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 364 YVNIALLCVQESADDRPTMNDVVSML 389
C Q+ ++RP +VS+L
Sbjct: 286 -------CWQKDRNNRPKFEQIVSIL 304
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 72
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 127
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKS 186
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 236
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 237 --------LMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 273
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 147/297 (49%), Gaps = 38/297 (12%)
Query: 104 LFSFSSVSTATNTFSDTNKLGEGGFGPVYKGVLR----KGDEIAVKRLS-GRSEQGLREM 158
+ F+ ATN D +G G FG V G L+ K +A+K L G +E+ R+
Sbjct: 23 VHEFAKELDATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 81
Query: 159 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQ 218
EAS++ + H N++RL G +++ EYM N SLD FL + + + V
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVG 139
Query: 219 IIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
++ GIA G+ YL S + +HRDL A NIL++ ++ K+SDFG++R+ + A T+R
Sbjct: 140 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
Query: 279 IVGT-YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLW 337
+ SPE F+ SDV+S+G++L E++S + W++
Sbjct: 197 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-------------YWEM- 242
Query: 338 TSNRTLELIDD-----PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
++ ++ +D+ P ++ + Q++L C Q+ ++RP +VS+L
Sbjct: 243 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLD-------CWQKDRNNRPKFEQIVSIL 292
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 147/297 (49%), Gaps = 38/297 (12%)
Query: 104 LFSFSSVSTATNTFSDTNKLGEGGFGPVYKGVLR----KGDEIAVKRLS-GRSEQGLREM 158
+ F+ ATN D +G G FG V G L+ K +A+K L G +E+ R+
Sbjct: 6 VHEFAKELDATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 159 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQ 218
EAS++ + H N++RL G +++ EYM N SLD FL + + + V
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVG 122
Query: 219 IIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
++ GIA G+ YL S + +HRDL A NIL++ ++ K+SDFG++R+ + A T+R
Sbjct: 123 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 279 IVGT-YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLW 337
+ SPE F+ SDV+S+G++L E++S + W++
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-------------YWEM- 225
Query: 338 TSNRTLELIDD-----PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
++ ++ +D+ P ++ + Q++L C Q+ ++RP +VS+L
Sbjct: 226 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLD-------CWQKDRNNRPKFEQIVSIL 275
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 140/279 (50%), Gaps = 29/279 (10%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
T +LG G FG V+ G ++AVK L + EA+++ ++QH+ LVR
Sbjct: 10 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 68
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
L + ++ +I EYM N SL FL P+ I L + + IA+G+ ++ + +
Sbjct: 69 LY-AVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERN- 125
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
IHR+L+A+NIL+ ++ KI+DFG+AR+ NE A + +PE G
Sbjct: 126 --YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGT 182
Query: 296 FSIKSDVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELI-DDPVLE 352
F+IKSDV+SFG+LL EIV+ + G+ + + L R ++ D E
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPDNCPE 233
Query: 353 DEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTN 391
+ Y L+R LC +E +DRPT + + S+L +
Sbjct: 234 ELYQ----LMR------LCWKERPEDRPTFDYLRSVLED 262
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAV-V 82
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 137
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 196
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 246
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 247 --------LMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 71
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 126
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 185
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 235
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 236 --------LMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 272
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
++G G FG V+ G D++A+K R SE+ E EA V+ K+ H LV+L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYG 69
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
C+++ L++E+M + L +L T+R L T + + + +G+ YL + S +
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAS---V 124
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSI 298
IHRDL A N L+ ++ K+SDFGM R ++ ++T + SPE +S
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSS 183
Query: 299 KSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
KSDV+SFGVL+ E+ S K R++S V D+ T R Y +
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDISTGFRL------------YKPR 227
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAA 395
I C +E +DRP + ++ L AA+
Sbjct: 228 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 73
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 128
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 187
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 237
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 238 --------LMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 274
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 79
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQL--VDMSAQIASGMAYVE---RMNYVH 134
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 193
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 243
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 244 --------LMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 280
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 137
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 196
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 246
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 247 --------LMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 136/272 (50%), Gaps = 35/272 (12%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLS---GRSEQGLREMKNEASVIAKVQHKN 172
FSD ++G G FG VY +R + +A+K++S +S + +++ E + K++H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
++ GC + + L+ EY + D L + K+ L + V + G QGL YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQE-VEIAAVTHGALQGLAYLHS 133
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL 292
++ +IHRD+KA NILL + K+ DFG A I A + VGT +M+PE L
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASI------MAPANXFVGTPYWMAPEVIL 184
Query: 293 ---EGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDP 349
EG + K DV+S G+ +E+ ++ L+ ++++ L ++ N + P
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIEL--AERKPPLFNMNAMSALYHI----AQNES------P 232
Query: 350 VLEDEYSSKQVLLRYVNIALLCVQESADDRPT 381
L+ + S+ + N C+Q+ DRPT
Sbjct: 233 ALQSGHWSEY----FRNFVDSCLQKIPQDRPT 260
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 79
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQL--VDMSAQIASGMAYVE---RMNYVH 134
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF-PIKWTAPEAALYGRFTIKS 193
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 243
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 244 --------LMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 280
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 137
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 196
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 246
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 247 --------LMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 137
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 196
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 246
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 247 --------LMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 137
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKS 196
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 246
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 247 --------LMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 140/278 (50%), Gaps = 36/278 (12%)
Query: 123 LGEGGFGPVYKGVLR-----KGDEIAVKRL-SGRSEQGLREMKNEASVIAKVQHKNLVRL 176
+G G FG VYKG+L+ K +A+K L +G +E+ + EA ++ + H N++RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 177 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRV 236
G ++I EYM N +LD FL + + + V ++ GIA G+ YL + +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSV--LQLVGMLRGIAAGMKYL---ANM 166
Query: 237 RIIHRDLKASNILLDKDMNPKISDFGMARICGGN-ELQANTSRIVGTYGYMSPEYALEGI 295
+HRDL A NIL++ ++ K+SDFG++R+ + E TS + +PE
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 296 FSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDD----PVL 351
F+ SDV+SFG+++ E+++ + W+L +++ ++ I+D P
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERP-------------YWEL-SNHEVMKAINDGFRLPTP 272
Query: 352 EDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
D S+ L+ + C Q+ RP D+VS+L
Sbjct: 273 MDCPSAIYQLM------MQCWQQERARRPKFADIVSIL 304
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 136/272 (50%), Gaps = 35/272 (12%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLS---GRSEQGLREMKNEASVIAKVQHKN 172
FSD ++G G FG VY +R + +A+K++S +S + +++ E + K++H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
++ GC + + L+ EY + D L + K+ L + V + G QGL YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQE-VEIAAVTHGALQGLAYLHS 172
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL 292
++ +IHRD+KA NILL + K+ DFG A I A + VGT +M+PE L
Sbjct: 173 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVIL 223
Query: 293 ---EGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDP 349
EG + K DV+S G+ +E+ ++ L+ ++++ L ++ N + P
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIEL--AERKPPLFNMNAMSALYHI----AQNES------P 271
Query: 350 VLEDEYSSKQVLLRYVNIALLCVQESADDRPT 381
L+ + S+ + N C+Q+ DRPT
Sbjct: 272 ALQSGHWSEY----FRNFVDSCLQKIPQDRPT 299
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 6/201 (2%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLR--EMKNEASVIAKVQHKNLVRLLGC 179
K+G G FG V++ G ++AVK L + R E E +++ +++H N+V +G
Sbjct: 44 KIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
++ EY+ SL L R LD R+ + +A+G+ YLH + I+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP-IV 161
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDLK+ N+L+DK K+ DFG++R+ L + + GT +M+PE + + K
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXA--AGTPEWMAPEVLRDEPSNEK 219
Query: 300 SDVFSFGVLLLEIVSGKKNTG 320
SDV+SFGV+L E+ + ++ G
Sbjct: 220 SDVYSFGVILWELATLQQPWG 240
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L EA V+ K++H+ LV+L +
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQLYAV-V 249
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 304
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+ R+ NE A + +PE AL G F+IKS
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 363
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 413
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 414 --------LMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQXQPG 450
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + ++ EYMP +L +L + R + V + + I+ + YL + I
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRE-CNREEVTAVVLLYMATQISSAMEYL---EKKNFI 152
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNTFSIK 211
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 212 SDVWAFGVLLWEIAT 226
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 6/201 (2%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLR--EMKNEASVIAKVQHKNLVRLLGC 179
K+G G FG V++ G ++AVK L + R E E +++ +++H N+V +G
Sbjct: 44 KIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
++ EY+ SL L R LD R+ + +A+G+ YLH + I+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIV 161
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HR+LK+ N+L+DK K+ DFG++R+ L + ++ GT +M+PE + + K
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA--AGTPEWMAPEVLRDEPSNEK 219
Query: 300 SDVFSFGVLLLEIVSGKKNTG 320
SDV+SFGV+L E+ + ++ G
Sbjct: 220 SDVYSFGVILWELATLQQPWG 240
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM SL DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 137
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 196
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 246
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 247 --------LMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM L DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 137
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 196
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 246
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 247 --------LMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 29/285 (10%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
KLG+G FG V+ G +A+K L + EA V+ K++H+ LV+L +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 182 DKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EYM L DF + K + L + V + IA G+ Y+ R+ +H
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQL--VDMAAQIASGMAYVE---RMNYVH 137
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL+A+NIL+ +++ K++DFG+AR+ NE A + +PE AL G F+IKS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKS 196
Query: 301 DVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
DV+SFG+LL E+ + + G+ + L+ + + + E + D
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---------- 246
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQPA 403
+ C ++ ++RPT + + L + + P QP
Sbjct: 247 --------LMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 138/278 (49%), Gaps = 37/278 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRL-SGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
+G G FG V G L+ + +A+K L +G +++ R+ +EAS++ + H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G ++I EYM N SLD FL R + + V ++ GI G+ YL S V
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSDMSAV- 153
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG-TYGYMSPEYALEGIF 296
HRDL A NIL++ ++ K+SDFGM+R+ + A T+R + +PE F
Sbjct: 154 --HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 297 SIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDD-----PVL 351
+ SDV+S+G+++ E++S + WD+ ++ ++ I++ P +
Sbjct: 212 TSASDVWSYGIVMWEVMSYGERP-------------YWDM-SNQDVIKAIEEGYRLPPPM 257
Query: 352 EDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
+ + Q++L C Q+ DRP +V+ML
Sbjct: 258 DCPIALHQLMLD-------CWQKERSDRPKFGQIVNML 288
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 141/291 (48%), Gaps = 29/291 (9%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
T +LG G G V+ G ++AVK L + EA+++ ++QH+ LV
Sbjct: 13 ETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYS 234
RL + ++ +I EYM N SL FL P+ I L + + IA+G+ ++ + +
Sbjct: 72 RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 235 RVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEG 294
IHRDL+A+NIL+ ++ KI+DFG+AR+ E A + +PE G
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI-KWTAPEAINYG 185
Query: 295 IFSIKSDVFSFGVLLLEIVSGKK--NTGLYRTDSLNLLGYVWDLWTSNRTLELI-DDPVL 351
F+IKSDV+SFG+LL EIV+ + G+ + + L R ++ D
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---------ERGYRMVRPDNCP 236
Query: 352 EDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPPKQP 402
E+ Y L+R LC +E +DRPT + + S+L + A QP
Sbjct: 237 EELYQ----LMR------LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 277
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 158/326 (48%), Gaps = 39/326 (11%)
Query: 75 LKANNVNIELPLNSKLIERSKKKEVDQLPLFSFSSVSTATNTFSDTNKLGEGGFGPVYKG 134
L N +++LP ++ ++ Q + F+ ATN D +G G FG V G
Sbjct: 7 LHFGNGHLKLPGLRTFVDPHTFEDPTQT-VHEFAKELDATNISID-KVVGAGEFGEVCSG 64
Query: 135 VLR----KGDEIAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILI 189
L+ K +A+K L G +E+ R+ EAS++ + H N++RL G +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 190 YEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNIL 249
E M N SLD FL + + + V ++ GIA G+ YL S + +HRDL A NIL
Sbjct: 125 TEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGAVHRDLAARNIL 179
Query: 250 LDKDMNPKISDFGMARICGGNELQANTSRIVG-TYGYMSPEYALEGIFSIKSDVFSFGVL 308
++ ++ K+SDFG++R+ + A T+R + SPE F+ SDV+S+G++
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 309 LLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDD-----PVLEDEYSSKQVLLR 363
L E++S + W++ ++ ++ +D+ P ++ + Q++L
Sbjct: 240 LWEVMSYGERP-------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 364 YVNIALLCVQESADDRPTMNDVVSML 389
C Q+ ++RP +VS+L
Sbjct: 286 -------CWQKDRNNRPKFEQIVSIL 304
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 158/326 (48%), Gaps = 39/326 (11%)
Query: 75 LKANNVNIELPLNSKLIERSKKKEVDQLPLFSFSSVSTATNTFSDTNKLGEGGFGPVYKG 134
L N +++LP ++ ++ Q + F+ ATN D +G G FG V G
Sbjct: 7 LHFGNGHLKLPGLRTYVDPHTYEDPTQT-VHEFAKELDATNISID-KVVGAGEFGEVCSG 64
Query: 135 VLR----KGDEIAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILI 189
L+ K +A+K L G +E+ R+ EAS++ + H N++RL G +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 190 YEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNIL 249
E M N SLD FL + + + V ++ GIA G+ YL S + +HRDL A NIL
Sbjct: 125 TEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL 179
Query: 250 LDKDMNPKISDFGMARICGGNELQANTSRIVG-TYGYMSPEYALEGIFSIKSDVFSFGVL 308
++ ++ K+SDFG++R+ + A T+R + SPE F+ SDV+S+G++
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 309 LLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDD-----PVLEDEYSSKQVLLR 363
L E++S + W++ ++ ++ +D+ P ++ + Q++L
Sbjct: 240 LWEVMSYGERP-------------YWEM-SNQDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 364 YVNIALLCVQESADDRPTMNDVVSML 389
C Q+ ++RP +VS+L
Sbjct: 286 -------CWQKDRNNRPKFEQIVSIL 304
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 138/278 (49%), Gaps = 37/278 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRL-SGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
+G G FG V G L+ + +A+K L +G +++ R+ +EAS++ + H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G ++I EYM N SLD FL R + + V ++ GI G+ YL S V
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSDMSYV- 138
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG-TYGYMSPEYALEGIF 296
HRDL A NIL++ ++ K+SDFGM+R+ + A T+R + +PE F
Sbjct: 139 --HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
Query: 297 SIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDD-----PVL 351
+ SDV+S+G+++ E++S + WD+ ++ ++ I++ P +
Sbjct: 197 TSASDVWSYGIVMWEVMSYGERP-------------YWDM-SNQDVIKAIEEGYRLPPPM 242
Query: 352 EDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
+ + Q++L C Q+ DRP +V+ML
Sbjct: 243 DCPIALHQLMLD-------CWQKERSDRPKFGQIVNML 273
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 138/278 (49%), Gaps = 37/278 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRL-SGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
+G G FG V G L+ + +A+K L +G +++ R+ +EAS++ + H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G ++I EYM N SLD FL R + + V ++ GI G+ YL S V
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYLSDMSYV- 132
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG-TYGYMSPEYALEGIF 296
HRDL A NIL++ ++ K+SDFGM+R+ + A T+R + +PE F
Sbjct: 133 --HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 297 SIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDD-----PVL 351
+ SDV+S+G+++ E++S + WD+ ++ ++ I++ P +
Sbjct: 191 TSASDVWSYGIVMWEVMSYGERP-------------YWDM-SNQDVIKAIEEGYRLPPPM 236
Query: 352 EDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
+ + Q++L C Q+ DRP +V+ML
Sbjct: 237 DCPIALHQLMLD-------CWQKERSDRPKFGQIVNML 267
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 146/297 (49%), Gaps = 38/297 (12%)
Query: 104 LFSFSSVSTATNTFSDTNKLGEGGFGPVYKGVLR----KGDEIAVKRLS-GRSEQGLREM 158
+ F+ ATN D +G G FG V G L+ K +A+K L G +E+ R+
Sbjct: 6 VHEFAKELDATNISID-KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 159 KNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQ 218
EAS++ + H N++RL G +++ E M N SLD FL + + + V
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVG 122
Query: 219 IIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
++ GIA G+ YL S + +HRDL A NIL++ ++ K+SDFG++R+ + A T+R
Sbjct: 123 MLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 279 IVGT-YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLW 337
+ SPE F+ SDV+S+G++L E++S + W++
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-------------YWEM- 225
Query: 338 TSNRTLELIDD-----PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
++ ++ +D+ P ++ + Q++L C Q+ ++RP +VS+L
Sbjct: 226 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLD-------CWQKDRNNRPKFEQIVSIL 275
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
KLG G FG V+ K ++AVK + S + EA+V+ +QH LV+L
Sbjct: 21 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKL-HAV 78
Query: 181 IDKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
+ K+ +I E+M SL DF D + L + IA+G+ ++ Q + I
Sbjct: 79 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YI 133
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL+A+NIL+ + KI+DFG+AR+ NE A + +PE G F+IK
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIK 192
Query: 300 SDVFSFGVLLLEIVS 314
SDV+SFG+LL+EIV+
Sbjct: 193 SDVWSFGILLMEIVT 207
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 131/278 (47%), Gaps = 27/278 (9%)
Query: 120 TNKLGEGGFGPVYKGVLRKGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
++G G FG V+ G D++A+K R SE+ E EA V+ K+ H LV+L
Sbjct: 10 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLY 66
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G C+++ L++E+M + L +L T+R L T + + + +G+ YL +
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 121
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFS 297
+IHRDL A N L+ ++ K+SDFGM R ++ ++T + SPE +S
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYS 180
Query: 298 IKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSS 357
KSDV+SFGVL+ E+ S K R++S V D+ T R Y
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDISTGFRL------------YKP 224
Query: 358 KQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAA 395
+ I C +E +DRP + ++ L A +
Sbjct: 225 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 131/278 (47%), Gaps = 27/278 (9%)
Query: 120 TNKLGEGGFGPVYKGVLRKGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
++G G FG V+ G D++A+K R SE+ E EA V+ K+ H LV+L
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLY 68
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G C+++ L++E+M + L +L T+R L T + + + +G+ YL +
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 123
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFS 297
+IHRDL A N L+ ++ K+SDFGM R ++ ++T + SPE +S
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYS 182
Query: 298 IKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSS 357
KSDV+SFGVL+ E+ S K R++S V D+ T R Y
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDISTGFRL------------YKP 226
Query: 358 KQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAA 395
+ I C +E +DRP + ++ L A +
Sbjct: 227 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R ++ V + + I+ + YL + I
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYL---EKKNFI 138
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 197
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R ++ V + + I+ + YL + I
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYL---EKKNFI 138
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 197
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R ++ V + + I+ + YL + I
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYL---EKKNFI 137
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 196
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 197 SDVWAFGVLLWEIAT 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R ++ V + + I+ + YL + I
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYL---EKKNFI 133
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 192
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R ++ V + + I+ + YL + I
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYL---EKKNFI 133
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 192
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 135/296 (45%), Gaps = 39/296 (13%)
Query: 122 KLGEGGFGPVY----KGVLRKGDE--IAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LGEG FG V+ +L + D+ +AVK L SE ++ + EA ++ +QH+++VR
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTKRIL----------LDWVTRVQIIEGI 223
G C + ++++EYM + L+ FL P ++L L + + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 224 AQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTY 283
A G++YL + + +HRDL N L+ + + KI DFGM+R + R +
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL 343
+M PE L F+ +SDV+SFGV+L EI + K +++ + D T R L
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-----DCITQGREL 256
Query: 344 ELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPP 399
E + I C Q R ++ DV + L +A A PP
Sbjct: 257 E-----------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL--QALAQAPP 299
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 135/296 (45%), Gaps = 39/296 (13%)
Query: 122 KLGEGGFGPVY----KGVLRKGDE--IAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LGEG FG V+ +L + D+ +AVK L SE ++ + EA ++ +QH+++VR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTKRIL----------LDWVTRVQIIEGI 223
G C + ++++EYM + L+ FL P ++L L + + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 224 AQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTY 283
A G++YL + + +HRDL N L+ + + KI DFGM+R + R +
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL 343
+M PE L F+ +SDV+SFGV+L EI + K +++ + D T R L
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-----DCITQGREL 250
Query: 344 ELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPP 399
E + I C Q R ++ DV + L +A A PP
Sbjct: 251 E-----------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL--QALAQAPP 293
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
KLG G FG V+ K ++AVK + S + EA+V+ +QH LV+L
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKL-HAV 251
Query: 181 IDKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
+ K+ +I E+M SL DF D + L + IA+G+ ++ Q + I
Sbjct: 252 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YI 306
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL+A+NIL+ + KI+DFG+AR+ NE A + +PE G F+IK
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIK 365
Query: 300 SDVFSFGVLLLEIVS 314
SDV+SFG+LL+EIV+
Sbjct: 366 SDVWSFGILLMEIVT 380
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 131/278 (47%), Gaps = 27/278 (9%)
Query: 120 TNKLGEGGFGPVYKGVLRKGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
++G G FG V+ G D++A+K R SE+ E EA V+ K+ H LV+L
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLY 71
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G C+++ L++E+M + L +L T+R L T + + + +G+ YL +
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 126
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFS 297
+IHRDL A N L+ ++ K+SDFGM R ++ ++T + SPE +S
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYS 185
Query: 298 IKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSS 357
KSDV+SFGVL+ E+ S K R++S V D+ T R Y
Sbjct: 186 SKSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDISTGFRL------------YKP 229
Query: 358 KQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAA 395
+ I C +E +DRP + ++ L A +
Sbjct: 230 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R ++ V + + I+ + YL + I
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYL---EKKNFI 138
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIK 197
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G FG VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R + V + + I+ + YL + I
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYL---EKKNFI 131
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIK 190
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R ++ V + + I+ + YL + I
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYL---EKKNFI 135
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 194
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 195 SDVWAFGVLLWEIAT 209
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 134/291 (46%), Gaps = 37/291 (12%)
Query: 122 KLGEGGFGPVY----KGVLRKGDEI--AVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LGEG FG V+ + + D+I AVK L S+ ++ EA ++ +QH+++V+
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTKRIL--------LDWVTRVQIIEGIAQ 225
G C++ D I+++EYM + L+ FL P ++ L + I + IA
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGY 285
G++YL + +HRDL N L+ +++ KI DFGM+R + + +
Sbjct: 140 GMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLEL 345
M PE + F+ +SDV+S GV+L EI + K W ++N +E
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP--------------WYQLSNNEVIEC 242
Query: 346 IDDP-VLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAA 395
I VL+ + Q + + L C Q R + + ++L N A A
Sbjct: 243 ITQGRVLQRPRTCPQEVY---ELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R ++ V + + I+ + YL + I
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYL---EKKNFI 134
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIK 193
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 194 SDVWAFGVLLWEIAT 208
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R ++ V + + I+ + YL + I
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYL---EKKNFI 135
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 194
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 195 SDVWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R ++ V + + I+ + YL + I
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYL---EKKNFI 146
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 205
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 206 SDVWAFGVLLWEIAT 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R ++ V + + I+ + YL + I
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYL---EKKNFI 138
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 197
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 135/296 (45%), Gaps = 39/296 (13%)
Query: 122 KLGEGGFGPVY----KGVLRKGDE--IAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LGEG FG V+ +L + D+ +AVK L SE ++ + EA ++ +QH+++VR
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTKRIL----------LDWVTRVQIIEGI 223
G C + ++++EYM + L+ FL P ++L L + + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 224 AQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTY 283
A G++YL + + +HRDL N L+ + + KI DFGM+R + R +
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL 343
+M PE L F+ +SDV+SFGV+L EI + K Y+ + + D T R L
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP-WYQLSNTEAI----DCITQGREL 279
Query: 344 ELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHPP 399
E + I C Q R ++ DV + L +A A PP
Sbjct: 280 E-----------RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL--QALAQAPP 322
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R + V + + I+ + YL + I
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYL---EKKNFI 131
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI-KWTAPESLAYNKFSIK 190
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 119/220 (54%), Gaps = 22/220 (10%)
Query: 123 LGEGGFGPVYKGVLRKGDE-----IAVKRLSGRS-EQGLREMKNEASVIAKVQHKNLVRL 176
LG G FG VYKG+ E +A+K L+ + + E +EA ++A + H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 177 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQGLLYLHQ 232
LG C+ + L+ + MP+ L ++ + I LL+W + IA+G++YL +
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 135
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL 292
R++HRDL A N+L+ + KI+DFG+AR+ G+E + N +M+ E
Sbjct: 136 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 293 EGIFSIKSDVFSFGVLLLEIVS--GKKNTGLYRTDSLNLL 330
F+ +SDV+S+GV + E+++ GK G+ + +LL
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL 232
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R + V + + I+ + YL + I
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYL---EKKNFI 133
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 192
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 13/201 (6%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
++G G FG VYKG + ++AVK L + + Q L+ KNE V+ K +H N++ +G
Sbjct: 14 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
K + ++ ++ SL L + + + + I AQG+ YLH S I
Sbjct: 72 YST-KPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL---EGI 295
IHRDLK++NI L +D+ KI DFG+A + ++ G+ +M+PE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 296 FSIKSDVFSFGVLLLEIVSGK 316
+S +SDV++FG++L E+++G+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 13/201 (6%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
++G G FG VYKG + ++AVK L + + Q L+ KNE V+ K +H N++ +G
Sbjct: 16 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
K + ++ ++ SL L + + + + I AQG+ YLH S I
Sbjct: 74 YST-KPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 127
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL---EGI 295
IHRDLK++NI L +D+ KI DFG+A + ++ G+ +M+PE +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 296 FSIKSDVFSFGVLLLEIVSGK 316
+S +SDV++FG++L E+++G+
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQ 208
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R + V + + I+ + YL + I
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYL---EKKNFI 133
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 192
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 119/220 (54%), Gaps = 22/220 (10%)
Query: 123 LGEGGFGPVYKGVLRKGDE-----IAVKRLSGRS-EQGLREMKNEASVIAKVQHKNLVRL 176
LG G FG VYKG+ E +A+K L+ + + E +EA ++A + H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 177 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQGLLYLHQ 232
LG C+ + L+ + MP+ L ++ + I LL+W + IA+G++YL +
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 158
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL 292
R++HRDL A N+L+ + KI+DFG+AR+ G+E + N +M+ E
Sbjct: 159 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 293 EGIFSIKSDVFSFGVLLLEIVS--GKKNTGLYRTDSLNLL 330
F+ +SDV+S+GV + E+++ GK G+ + +LL
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL 255
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 13/201 (6%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
++G G FG VYKG GD +AVK L + + Q L+ KNE V+ K +H N++ +G
Sbjct: 19 QRIGSGSFGTVYKGKWH-GD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
K + ++ ++ SL L + + + + I AQG+ YLH S I
Sbjct: 77 YST-KPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL---EGI 295
IHRDLK++NI L +D+ KI DFG+A + ++ G+ +M+PE +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 296 FSIKSDVFSFGVLLLEIVSGK 316
+S +SDV++FG++L E+++G+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 13/201 (6%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
++G G FG VYKG GD +AVK L + + Q L+ KNE V+ K +H N++ +G
Sbjct: 19 QRIGSGSFGTVYKGKWH-GD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
K + ++ ++ SL L + + + + I AQG+ YLH S I
Sbjct: 77 YST-KPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL---EGI 295
IHRDLK++NI L +D+ KI DFG+A + ++ G+ +M+PE +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 296 FSIKSDVFSFGVLLLEIVSGK 316
+S +SDV++FG++L E+++G+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R + V + + I+ + YL + I
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYL---EKKNFI 133
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 192
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R + V + + I+ + YL + I
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYL---EKKNFI 138
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 197
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 198 SDVWAFGVLLWEIAT 212
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 113/205 (55%), Gaps = 21/205 (10%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
++G G FG VYKG GD +AVK L + + Q L+ KNE V+ K +H N++ +G
Sbjct: 34 QRIGSGSFGTVYKGKWH-GD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
K + ++ ++ SL L + + + + I AQG+ YLH S I
Sbjct: 92 YST-KPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 145
Query: 239 IHRDLKASNILLDKDMNPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPEYAL-- 292
IHRDLK++NI L +D+ KI DFG+A R G ++ + ++ G+ +M+PE
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQ 201
Query: 293 -EGIFSIKSDVFSFGVLLLEIVSGK 316
+ +S +SDV++FG++L E+++G+
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R + V + + I+ + YL + I
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYL---EKKNFI 133
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 192
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 193 SDVWAFGVLLWEIAT 207
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R + V + + I+ + YL + I
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYL---EKKNFI 131
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYNKFSIK 190
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 113/205 (55%), Gaps = 21/205 (10%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
++G G FG VYKG GD +AVK L + + Q L+ KNE V+ K +H N++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWH-GD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
K + ++ ++ SL L + + + + I AQG+ YLH S I
Sbjct: 72 YST-KPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 239 IHRDLKASNILLDKDMNPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPEYAL-- 292
IHRDLK++NI L +D+ KI DFG+A R G ++ + ++ G+ +M+PE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQ 181
Query: 293 -EGIFSIKSDVFSFGVLLLEIVSGK 316
+ +S +SDV++FG++L E+++G+
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 13/201 (6%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
++G G FG VYKG GD +AVK L + + Q L+ KNE V+ K +H N++ +G
Sbjct: 41 QRIGSGSFGTVYKGKWH-GD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
K + ++ ++ SL L + + + + I AQG+ YLH S I
Sbjct: 99 YST-KPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 152
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL---EGI 295
IHRDLK++NI L +D+ KI DFG+A + ++ G+ +M+PE +
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 296 FSIKSDVFSFGVLLLEIVSGK 316
+S +SDV++FG++L E+++G+
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQ 233
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 111/203 (54%), Gaps = 19/203 (9%)
Query: 123 LGEGGFGPVYKGVLR----KGDEIAVKRL-SGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
+G G FG V +G L+ K +A+K L G +E+ RE +EAS++ + +H N++RL
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQII---EGIAQGLLYLHQYS 234
G + +++ E+M N +LD FL R+ T +Q++ GIA G+ YL + S
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFL-----RLNDGQFTVIQLVGMLRGIASGMRYLAEMS 138
Query: 235 RVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG---TYGYMSPEYA 291
V HRDL A NIL++ ++ K+SDFG++R N + +G + +PE
Sbjct: 139 YV---HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 292 LEGIFSIKSDVFSFGVLLLEIVS 314
F+ SD +S+G+++ E++S
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 13/201 (6%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
++G G FG VYKG GD +AVK L + + Q L+ KNE V+ K +H N++ +G
Sbjct: 42 QRIGSGSFGTVYKGKWH-GD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
K + ++ ++ SL L + + + + I AQG+ YLH S I
Sbjct: 100 YST-KPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL---EGI 295
IHRDLK++NI L +D+ KI DFG+A + ++ G+ +M+PE +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 296 FSIKSDVFSFGVLLLEIVSGK 316
+S +SDV++FG++L E+++G+
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ 234
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R ++ V + + I+ + YL + I
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYL---EKKNFI 134
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A + +PE FSIK
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYNKFSIK 193
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 194 SDVWAFGVLLWEIAT 208
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 110/200 (55%), Gaps = 13/200 (6%)
Query: 123 LGEGGFGPVYKGVLR----KGDEIAVKRL-SGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
+G G FG V +G L+ K +A+K L G +E+ RE +EAS++ + +H N++RL
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G + +++ E+M N +LD FL + + + V ++ GIA G+ YL + S V
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYLAEMSYV- 138
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG---TYGYMSPEYALEG 294
HRDL A NIL++ ++ K+SDFG++R N + +G + +PE
Sbjct: 139 --HRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR 196
Query: 295 IFSIKSDVFSFGVLLLEIVS 314
F+ SD +S+G+++ E++S
Sbjct: 197 KFTSASDAWSYGIVMWEVMS 216
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R ++ V + + I+ + YL + I
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYL---EKKNFI 135
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL A N L+ ++ K++DFG++R+ G+ A + +PE FSIK
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYNKFSIK 194
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 195 SDVWAFGVLLWEIAT 209
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 113/205 (55%), Gaps = 21/205 (10%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
++G G FG VYKG GD +AVK L + + Q L+ KNE V+ K +H N++ +G
Sbjct: 42 QRIGSGSFGTVYKGKWH-GD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
K + ++ ++ SL L + + + + I AQG+ YLH S I
Sbjct: 100 YST-KPQLAIVTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 239 IHRDLKASNILLDKDMNPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPEYAL-- 292
IHRDLK++NI L +D+ KI DFG+A R G ++ + ++ G+ +M+PE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQ 209
Query: 293 -EGIFSIKSDVFSFGVLLLEIVSGK 316
+ +S +SDV++FG++L E+++G+
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 130/277 (46%), Gaps = 27/277 (9%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
++G G FG V+ G D++A+K R SE+ E EA V+ K+ H LV+L G
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYG 70
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
C+++ L+ E+M + L +L T+R L T + + + +G+ YL + +
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 125
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSI 298
IHRDL A N L+ ++ K+SDFGM R ++ ++T + SPE +S
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYSS 184
Query: 299 KSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSK 358
KSDV+SFGVL+ E+ S K R++S V D+ T R Y +
Sbjct: 185 KSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDISTGFRL------------YKPR 228
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAA 395
I C +E +DRP + ++ L A +
Sbjct: 229 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 130/278 (46%), Gaps = 27/278 (9%)
Query: 120 TNKLGEGGFGPVYKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
++G G FG V+ G D++A+K + SE E EA V+ K+ H LV+L
Sbjct: 32 VQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIE---EAEVMMKLSHPKLVQLY 88
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G C+++ L++E+M + L +L T+R L T + + + +G+ YL +
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 143
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFS 297
+IHRDL A N L+ ++ K+SDFGM R ++ ++T + SPE +S
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFSRYS 202
Query: 298 IKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSS 357
KSDV+SFGVL+ E+ S K R++S V D+ T R Y
Sbjct: 203 SKSDVWSFGVLMWEVFSEGKIPYENRSNS----EVVEDISTGFRL------------YKP 246
Query: 358 KQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAA 395
+ I C +E +DRP + ++ L A +
Sbjct: 247 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 115/219 (52%), Gaps = 33/219 (15%)
Query: 121 NKLGEGGFGPVYKGVL------RKGDEIAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNL 173
+LGE FG VYKG L + +A+K L ++E LRE ++EA + A++QH N+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 174 VRLLGCCIDKDEKI-LIYEYMPNKSLDFFLF-------------DPTKRILLDWVTRVQI 219
V LLG + KD+ + +I+ Y + L FL D T + L+ V +
Sbjct: 92 VCLLGV-VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
+ IA G+ YL S ++H+DL N+L+ +N KISD G+ R A+ ++
Sbjct: 151 VAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR----EVYAADYYKL 203
Query: 280 VGT----YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+G +M+PE + G FSI SD++S+GV+L E+ S
Sbjct: 204 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 115/219 (52%), Gaps = 33/219 (15%)
Query: 121 NKLGEGGFGPVYKGVL------RKGDEIAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNL 173
+LGE FG VYKG L + +A+K L ++E LRE ++EA + A++QH N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 174 VRLLGCCIDKDEKI-LIYEYMPNKSLDFFLF-------------DPTKRILLDWVTRVQI 219
V LLG + KD+ + +I+ Y + L FL D T + L+ V +
Sbjct: 75 VCLLGV-VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
+ IA G+ YL S ++H+DL N+L+ +N KISD G+ R A+ ++
Sbjct: 134 VAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR----EVYAADYYKL 186
Query: 280 VGT----YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+G +M+PE + G FSI SD++S+GV+L E+ S
Sbjct: 187 LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LG+G FG V Y + G+ +AVK+L +E+ LR+ + E ++ +QH N+V+
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 176 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G C + LI EY+P SL +L +RI D + +Q I +G+ YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 135
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG-----YMSP 288
R IHRDL NIL++ + KI DFG+ ++ Q V G + +P
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAP 191
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVS 314
E E FS+ SDV+SFGV+L E+ +
Sbjct: 192 ESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LG+G FG V Y + G+ +AVK+L +E+ LR+ + E ++ +QH N+V+
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 176 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G C + LI EY+P SL +L +RI D + +Q I +G+ YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 134
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG-----YMSP 288
R IHRDL NIL++ + KI DFG+ ++ Q V G + +P
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAP 190
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVS 314
E E FS+ SDV+SFGV+L E+ +
Sbjct: 191 ESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LG+G FG V Y + G+ +AVK+L +E+ LR+ + E ++ +QH N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 176 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G C + LI EY+P SL +L +RI D + +Q I +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI--DHIKLLQYTSQICKGMEYL--- 133
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG-----YMSP 288
R IHRDL NIL++ + KI DFG+ ++ Q V G + +P
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAP 189
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVS 314
E E FS+ SDV+SFGV+L E+ +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LG+G FG V Y + G+ +AVK+L +E+ LR+ + E ++ +QH N+V+
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 176 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G C + LI EY+P SL +L +RI D + +Q I +G+ YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 161
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG-----YMSP 288
R IHRDL NIL++ + KI DFG+ ++ Q V G + +P
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAP 217
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVS 314
E E FS+ SDV+SFGV+L E+ +
Sbjct: 218 ESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LG+G FG V Y + G+ +AVK+L +E+ LR+ + E ++ +QH N+V+
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 176 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G C + LI EY+P SL +L +RI D + +Q I +G+ YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 136
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG-----YMSP 288
R IHRDL NIL++ + KI DFG+ ++ Q V G + +P
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAP 192
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVS 314
E E FS+ SDV+SFGV+L E+ +
Sbjct: 193 ESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LG+G FG V Y + G+ +AVK+L +E+ LR+ + E ++ +QH N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 176 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G C + LI EY+P SL +L +RI D + +Q I +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 133
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG-----YMSP 288
R IHRDL NIL++ + KI DFG+ ++ Q V G + +P
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAP 189
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVS 314
E E FS+ SDV+SFGV+L E+ +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R ++ V + + I+ + YL + I
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYL---EKKNFI 337
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HR+L A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 396
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 397 SDVWAFGVLLWEIAT 411
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LG+G FG V Y + G+ +AVK+L +E+ LR+ + E ++ +QH N+V+
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 176 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G C + LI EY+P SL +L +RI D + +Q I +G+ YL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 129
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG-----YMSP 288
R IHRDL NIL++ + KI DFG+ ++ Q V G + +P
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAP 185
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVS 314
E E FS+ SDV+SFGV+L E+ +
Sbjct: 186 ESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LG+G FG V Y + G+ +AVK+L +E+ LR+ + E ++ +QH N+V+
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 176 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G C + LI EY+P SL +L +RI D + +Q I +G+ YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 128
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG-----YMSP 288
R IHRDL NIL++ + KI DFG+ ++ Q V G + +P
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAP 184
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVS 314
E E FS+ SDV+SFGV+L E+ +
Sbjct: 185 ESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R ++ V + + I+ + YL + I
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYL---EKKNFI 379
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HR+L A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIK 438
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 439 SDVWAFGVLLWEIAT 453
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LG+G FG V Y + G+ +AVK+L +E+ LR+ + E ++ +QH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 176 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G C + LI EY+P SL +L +RI D + +Q I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 130
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG-----YMSP 288
R IHRDL NIL++ + KI DFG+ ++ Q V G + +P
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAP 186
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVS 314
E E FS+ SDV+SFGV+L E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 137/274 (50%), Gaps = 29/274 (10%)
Query: 123 LGEGGFGPVYKGVLR----KGDEIAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLL 177
+G G FG V G L+ + +A+K L G +E+ R+ EAS++ + H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G +++ EYM N SLD FL + + + V ++ GI+ G+ YL S +
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV--IQLVGMLRGISAGMKYL---SDMG 144
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG-TYGYMSPEYALEGIF 296
+HRDL A NIL++ ++ K+SDFG++R+ + A T+R + +PE F
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 297 SIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPV-LEDEY 355
+ SDV+S+G+++ E+VS + W++ T+ ++ +++ L
Sbjct: 205 TSASDVWSYGIVMWEVVSYGERP-------------YWEM-TNQDVIKAVEEGYRLPSPM 250
Query: 356 SSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
L + + L C Q+ + RP +++V+ML
Sbjct: 251 DCPAALYQ---LMLDCWQKERNSRPKFDEIVNML 281
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LG+G FG V Y + G+ +AVK+L +E+ LR+ + E ++ +QH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 176 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G C + LI EY+P SL +L +RI D + +Q I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 130
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG-----YMSP 288
R IHRDL NIL++ + KI DFG+ ++ Q V G + +P
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAP 186
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVS 314
E E FS+ SDV+SFGV+L E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LG+G FG V Y + G+ +AVK+L +E+ LR+ + E ++ +QH N+V+
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 176 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G C + LI EY+P SL +L +RI D + +Q I +G+ YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 137
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG-----YMSP 288
R IHRDL NIL++ + KI DFG+ ++ Q V G + +P
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAP 193
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVS 314
E E FS+ SDV+SFGV+L E+ +
Sbjct: 194 ESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LG+G FG V Y + G+ +AVK+L +E+ LR+ + E ++ +QH N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 176 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G C + LI EY+P SL +L +RI D + +Q I +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 148
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG-----YMSP 288
R IHRDL NIL++ + KI DFG+ ++ Q V G + +P
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAP 204
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVS 314
E E FS+ SDV+SFGV+L E+ +
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
++G G FG VYKG + ++AVK L + + Q L+ KNE V+ K +H N++ +G
Sbjct: 14 QRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
I + ++ SL L + + + + I AQG+ YLH S I
Sbjct: 72 YSTAPQLAI-VTQWCEGSSLYHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL---EGI 295
IHRDLK++NI L +D+ KI DFG+A + ++ G+ +M+PE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 296 FSIKSDVFSFGVLLLEIVSGK 316
+S +SDV++FG++L E+++G+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+KLG G +G VY+GV +K +AVK L + + + E EA+V+ +++H NLV+LLG
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
C + +I E+M +L +L + R + V + + I+ + YL + I
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYL---EKKNFI 340
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HR+L A N L+ ++ K++DFG++R+ G+ A+ + +PE FSIK
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSIK 399
Query: 300 SDVFSFGVLLLEIVS 314
SDV++FGVLL EI +
Sbjct: 400 SDVWAFGVLLWEIAT 414
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 21/206 (10%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LG+G FG V Y + G+ +AVK+L +E+ LR+ + E ++ +QH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 176 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G C + LI EY+P SL +L +RI D + +Q I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 130
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE-----LQANTSRIVGTYGYMSP 288
R IHRDL NIL++ + KI DFG+ ++ ++ + S I + +P
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF----WYAP 186
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVS 314
E E FS+ SDV+SFGV+L E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LG+G FG V Y + G+ +AVK+L +E+ LR+ + E ++ +QH N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 176 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G C + LI EY+P SL +L +RI D + +Q I +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 148
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG-----YMSP 288
R IHRDL NIL++ + KI DFG+ ++ Q V G + +P
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAP 204
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVS 314
E E FS+ SDV+SFGV+L E+ +
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 74 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAEG 126
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 127 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 22/216 (10%)
Query: 122 KLGEGGFGPVYKGVL------RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LGEG FG V+ + +AVK L + ++ + EA ++ +QH+++V+
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTKRILLDWVTR-----------VQIIEG 222
G C D D I+++EYM + L+ FL P IL+D R + I
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGT 282
IA G++YL + +HRDL N L+ ++ KI DFGM+R + +
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 283 YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKN 318
+M PE + F+ +SDV+SFGV+L EI + K
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ 234
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 130
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 77 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 80 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 87 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 139
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 140 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 71 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 123
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 124 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKG 130
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 133
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 83 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 135
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 136 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 110/202 (54%), Gaps = 19/202 (9%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRL-SGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
+G G G V G LR + +A+K L +G +E+ R+ +EAS++ + H N++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G +++ EYM N SLD FL + + + V ++ G+ G+ YL S +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYL---SDLG 171
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAL 292
+HRDL A N+L+D ++ K+SDFG++R+ + A T+ T G + +PE
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT----TGGKIPIRWTAPEAIA 227
Query: 293 EGIFSIKSDVFSFGVLLLEIVS 314
FS SDV+SFGV++ E+++
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLA 249
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 102 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 154
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 155 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 122 KLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRL 176
+LG+G FG V Y + G+ +AVK+L +E+ LR+ + E ++ +QH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 177 LGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYS 234
G C + LI E++P SL +L +RI D + +Q I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI--DHIKLLQYTSQICKGMEYL---G 134
Query: 235 RVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPE 289
R IHRDL NIL++ + KI DFG+ ++ Q V G + +PE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEXXKVKEPGESPIFWYAPE 190
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVS 314
E FS+ SDV+SFGV+L E+ +
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 110/202 (54%), Gaps = 19/202 (9%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRL-SGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
+G G G V G LR + +A+K L +G +E+ R+ +EAS++ + H N++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G +++ EYM N SLD FL + + + V ++ G+ G+ YL S +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYL---SDLG 171
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG-----YMSPEYAL 292
+HRDL A N+L+D ++ K+SDFG++R+ + A T+ T G + +PE
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT----TGGKIPIRWTAPEAIA 227
Query: 293 EGIFSIKSDVFSFGVLLLEIVS 314
FS SDV+SFGV++ E+++
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLA 249
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 21/206 (10%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+LG+G FG V Y + G+ +AVK+L +E+ LR+ + E ++ +QH N+V+
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 176 LLGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G C + LI EY+P SL +L +RI D + +Q I +G+ YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL--- 131
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE-----LQANTSRIVGTYGYMSP 288
R IHR+L NIL++ + KI DFG+ ++ ++ + S I + +P
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF----WYAP 187
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVS 314
E E FS+ SDV+SFGV+L E+ +
Sbjct: 188 ESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 21/205 (10%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
++G G FG VYKG GD +AVK L + + Q L+ KNE V+ K +H N++ +G
Sbjct: 18 QRIGSGSFGTVYKGKWH-GD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
K + ++ ++ SL L + + + + I A+G+ YLH S I
Sbjct: 76 YST-KPQLAIVTQWCEGSSLYHHLHASETKFEMKKL--IDIARQTARGMDYLHAKS---I 129
Query: 239 IHRDLKASNILLDKDMNPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPEYAL-- 292
IHRDLK++NI L +D KI DFG+A R G ++ + ++ G+ +M+PE
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQ 185
Query: 293 -EGIFSIKSDVFSFGVLLLEIVSGK 316
+S +SDV++FG++L E+++G+
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 113/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 133
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG A++ G E + + +M
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 113/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG A++ G E + + +M
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 113/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG A++ G E + + +M
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 29/275 (10%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRL-SGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
+G G FG V G L+ + +A+K L SG +E+ R+ +EAS++ + H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G ++I E+M N SLD FL + + + V ++ GIA G+ YL + +
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL---ADMN 155
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG---TYGYMSPEYALEG 294
+HRDL A NIL++ ++ K+SDFG++R + + +G + +PE
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 215
Query: 295 IFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDE 354
F+ SDV+S+G+++ E++S + WD+ + + D L
Sbjct: 216 KFTSASDVWSYGIVMWEVMSYGERP-------------YWDMTNQDVINAIEQDYRLPPP 262
Query: 355 YSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
L + + L C Q+ + RP +V+ L
Sbjct: 263 MDCPSALHQ---LMLDCWQKDRNHRPKFGQIVNTL 294
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 113/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG A++ G E + + +M
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 103/195 (52%), Gaps = 19/195 (9%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
KLG G FG V+ K ++AVK + S + EA+V+ +QH LV+L
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKL-HAV 245
Query: 181 IDKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
+ K+ +I E+M SL DF D + L + IA+G+ ++ Q + I
Sbjct: 246 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YI 300
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIK 299
HRDL+A+NIL+ + KI+DFG+AR+ ++ + +PE G F+IK
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARVGAKFPIK-----------WTAPEAINFGSFTIK 349
Query: 300 SDVFSFGVLLLEIVS 314
SDV+SFG+LL+EIV+
Sbjct: 350 SDVWSFGILLMEIVT 364
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 21/205 (10%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
++G G FG VYKG GD +AVK L + + Q L+ KNE V+ K +H N++ +G
Sbjct: 30 QRIGSGSFGTVYKGKWH-GD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
K + ++ ++ SL L + + + + I A+G+ YLH S I
Sbjct: 88 YST-KPQLAIVTQWCEGSSLYHHLHASETKFEMKKL--IDIARQTARGMDYLHAKS---I 141
Query: 239 IHRDLKASNILLDKDMNPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPEYAL-- 292
IHRDLK++NI L +D KI DFG+A R G ++ + ++ G+ +M+PE
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQ 197
Query: 293 -EGIFSIKSDVFSFGVLLLEIVSGK 316
+S +SDV++FG++L E+++G+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 113/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG A++ G E + + +M
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 113/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG A++ G E + + +M
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F LG G FG VYKG+ + +G+++ A+ L S + +E+ +EA V+A V +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 111 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 163
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 164 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 220
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 221 ALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F L G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F L G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 84 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 20/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEI----AVKRL-SGRSEQGLREMKNEASVIAKVQH 170
F L G FG VYKG+ + +G+++ A+K L S + +E+ +EA V+A V +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQG 226
++ RLLG C+ + LI + MP L ++ + I LL+W + IA+G
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL R++HRDL A N+L+ + KI+DFG+A++ G E + + +M
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E L I++ +SDV+S+GV + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 148/348 (42%), Gaps = 60/348 (17%)
Query: 60 RDKREDLMTFDLDLNLKANNVNIELPLNSKLIERSKKKEVDQLPLFSFSSVSTATNTFSD 119
R K ++L ++L + SKL R+ D P +SF+ +++ + +
Sbjct: 3 RRKHQELQAMQMELQSPEYKL-------SKL--RTSTIMTDYNPNYSFAGKTSSISDLKE 53
Query: 120 TNK--------LGEGGFGPVYKGVLRKGD------EIAVKRLSGR-SEQGLREMKNEASV 164
+ LG G FG VY+G + ++AVK L SEQ + EA +
Sbjct: 54 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 113
Query: 165 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD----PTKRILLDWVTRVQII 220
I+K H+N+VR +G + + ++ E M L FL + P++ L + + +
Sbjct: 114 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 173
Query: 221 EGIAQGLLYLHQYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTS 277
IA G YL + IHRD+ A N LL KI DFGMAR + +A+
Sbjct: 174 RDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYY 226
Query: 278 RIVGT----YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYV 333
R G +M PE +EGIF+ K+D +SFGVLL EI S LGY+
Sbjct: 227 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 271
Query: 334 WDLWTSNR-TLELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRP 380
SN+ LE + D K I C Q +DRP
Sbjct: 272 PYPSKSNQEVLEFVTSGGRMD--PPKNCPGPVYRIMTQCWQHQPEDRP 317
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 137/315 (43%), Gaps = 51/315 (16%)
Query: 93 RSKKKEVDQLPLFSFSSVSTATNTFSDTNK--------LGEGGFGPVYKGVLRKGD---- 140
R+ D P +SF+ +++ + + + LG G FG VY+G +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 141 --EIAVKRLSGR-SEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKS 197
++AVK L SEQ + EA +I+K+ H+N+VR +G + + ++ E M
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 198 LDFFLFD----PTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILL--- 250
L FL + P++ L + + + IA G YL + IHRD+ A N LL
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP 177
Query: 251 DKDMNPKISDFGMARICGGNELQANTSRIVGT----YGYMSPEYALEGIFSIKSDVFSFG 306
KI DFGMAR + +A+ R G +M PE +EGIF+ K+D +SFG
Sbjct: 178 GPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 233
Query: 307 VLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNR-TLELIDDPVLEDEYSSKQVLLRYV 365
VLL EI S LGY+ SN+ LE + D K
Sbjct: 234 VLLWEIFS---------------LGYMPYPSKSNQEVLEFVTSGGRMD--PPKNCPGPVY 276
Query: 366 NIALLCVQESADDRP 380
I C Q +DRP
Sbjct: 277 RIMTQCWQHQPEDRP 291
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 36/291 (12%)
Query: 122 KLGEGGFGPVYKGVLR---KGD---EIAVKRLSGRSEQGLR-EMKNEASVIAKVQHKNLV 174
+LG+G FG VY+G R KG+ +AVK ++ + R E NEASV+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTK-----RILLDWVTRVQIIEGIAQGL 227
RLLG +++ E M + L +L P R +Q+ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMS 287
YL+ + +HRDL A N ++ D KI DFGM R + + + +M+
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELID 347
PE +G+F+ SD++SFGV+L EI S L + ++ + L+ +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS--------------LAEQPYQGLSNEQVLKFVM 246
Query: 348 DPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHP 398
D D+ R ++ +C Q + + RPT ++V++L ++ LHP
Sbjct: 247 DGGYLDQ--PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD---LHP 292
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
++G G FG VYKG GD +AVK L + + Q L+ KNE V+ K +H N++ +G
Sbjct: 30 QRIGSGSFGTVYKGKWH-GD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
+ ++ ++ SL L + + + + I A+G+ YLH S I
Sbjct: 88 YST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKL--IDIARQTARGMDYLHAKS---I 141
Query: 239 IHRDLKASNILLDKDMNPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPEYAL-- 292
IHRDLK++NI L +D KI DFG+A R G ++ + ++ G+ +M+PE
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQ 197
Query: 293 -EGIFSIKSDVFSFGVLLLEIVSGK 316
+S +SDV++FG++L E+++G+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 136/315 (43%), Gaps = 51/315 (16%)
Query: 93 RSKKKEVDQLPLFSFSSVSTATNTFSDTNK--------LGEGGFGPVYKGVLRKGD---- 140
R+ D P +SF+ +++ + + + LG G FG VY+G +
Sbjct: 7 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 66
Query: 141 --EIAVKRLSG-RSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKS 197
++AVK L SEQ + EA +I+K H+N+VR +G + + ++ E M
Sbjct: 67 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 126
Query: 198 LDFFLFD----PTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILL--- 250
L FL + P++ L + + + IA G YL + IHRD+ A N LL
Sbjct: 127 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP 183
Query: 251 DKDMNPKISDFGMARICGGNELQANTSRIVGT----YGYMSPEYALEGIFSIKSDVFSFG 306
KI DFGMAR + +A+ R G +M PE +EGIF+ K+D +SFG
Sbjct: 184 GPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 239
Query: 307 VLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNR-TLELIDDPVLEDEYSSKQVLLRYV 365
VLL EI S LGY+ SN+ LE + D K
Sbjct: 240 VLLWEIFS---------------LGYMPYPSKSNQEVLEFVTSGGRMD--PPKNCPGPVY 282
Query: 366 NIALLCVQESADDRP 380
I C Q +DRP
Sbjct: 283 RIMTQCWQHQPEDRP 297
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 136/315 (43%), Gaps = 51/315 (16%)
Query: 93 RSKKKEVDQLPLFSFSSVSTATNTFSDTNK--------LGEGGFGPVYKGVLRKGD---- 140
R+ D P +SF+ +++ + + + LG G FG VY+G +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 141 --EIAVKRLSG-RSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKS 197
++AVK L SEQ + EA +I+K H+N+VR +G + + ++ E M
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 198 LDFFLFD----PTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILL--- 250
L FL + P++ L + + + IA G YL + IHRD+ A N LL
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP 177
Query: 251 DKDMNPKISDFGMARICGGNELQANTSRIVGT----YGYMSPEYALEGIFSIKSDVFSFG 306
KI DFGMAR + +A+ R G +M PE +EGIF+ K+D +SFG
Sbjct: 178 GPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 233
Query: 307 VLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNR-TLELIDDPVLEDEYSSKQVLLRYV 365
VLL EI S LGY+ SN+ LE + D K
Sbjct: 234 VLLWEIFS---------------LGYMPYPSKSNQEVLEFVTSGGRMD--PPKNCPGPVY 276
Query: 366 NIALLCVQESADDRP 380
I C Q +DRP
Sbjct: 277 RIMTQCWQHQPEDRP 291
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 134/291 (46%), Gaps = 36/291 (12%)
Query: 122 KLGEGGFGPVYKGVLR---KGD---EIAVKRLSGRSEQGLR-EMKNEASVIAKVQHKNLV 174
+LG+G FG VY+G R KG+ +AVK ++ + R E NEASV+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTK-----RILLDWVTRVQIIEGIAQGL 227
RLLG +++ E M + L +L P R +Q+ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMS 287
YL+ + +HRDL A N ++ D KI DFGM R + + + +M+
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELID 347
PE +G+F+ SD++SFGV+L EI S L + ++ + L+ +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS--------------LAEQPYQGLSNEQVLKFVM 246
Query: 348 DPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHP 398
D D+ R ++ +C Q + RPT ++V++L ++ LHP
Sbjct: 247 DGGYLDQ--PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD---LHP 292
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 134/291 (46%), Gaps = 36/291 (12%)
Query: 122 KLGEGGFGPVYKGVLR---KGD---EIAVKRLSGRSEQGLR-EMKNEASVIAKVQHKNLV 174
+LG+G FG VY+G R KG+ +AVK ++ + R E NEASV+ ++V
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTK-----RILLDWVTRVQIIEGIAQGL 227
RLLG +++ E M + L +L P R +Q+ IA G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMS 287
YL+ + +HRDL A N ++ D KI DFGM R + + + +M+
Sbjct: 141 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELID 347
PE +G+F+ SD++SFGV+L EI S L + ++ + L+ +
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITS--------------LAEQPYQGLSNEQVLKFVM 243
Query: 348 DPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHP 398
D D+ R ++ +C Q + RPT ++V++L ++ LHP
Sbjct: 244 DGGYLDQ--PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD---LHP 289
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 106/204 (51%), Gaps = 17/204 (8%)
Query: 120 TNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+ ++G G FG VYKG + + ++ + + + +NE +V+ K +H N++ +G
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG- 99
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRII 239
+ KD ++ ++ SL L + + I AQG+ YLH + II
Sbjct: 100 YMTKDNLAIVTQWCEGSSLYKHLH--VQETKFQMFQLIDIARQTAQGMDYLHAKN---II 154
Query: 240 HRDLKASNILLDKDMNPKISDFGMA----RICGGNELQANTSRIVGTYGYMSPEYAL--- 292
HRD+K++NI L + + KI DFG+A R G +++ T ++ +M+PE
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL----WMAPEVIRMQD 210
Query: 293 EGIFSIKSDVFSFGVLLLEIVSGK 316
FS +SDV+S+G++L E+++G+
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 107/200 (53%), Gaps = 13/200 (6%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRL-SGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
+G G FG V G L+ + +A+K L SG +E+ R+ +EAS++ + H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G ++I E+M N SLD FL + + + V ++ GIA G+ YL + +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL---ADMN 129
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG---TYGYMSPEYALEG 294
+HR L A NIL++ ++ K+SDFG++R + + +G + +PE
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 189
Query: 295 IFSIKSDVFSFGVLLLEIVS 314
F+ SDV+S+G+++ E++S
Sbjct: 190 KFTSASDVWSYGIVMWEVMS 209
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 122/277 (44%), Gaps = 43/277 (15%)
Query: 123 LGEGGFGPVYKGVLRKGD------EIAVKRLSG-RSEQGLREMKNEASVIAKVQHKNLVR 175
LG G FG VY+G + ++AVK L SEQ + EA +I+K H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFD----PTKRILLDWVTRVQIIEGIAQGLLYLH 231
+G + + ++ E M L FL + P++ L + + + IA G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 232 QYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRIVGT----YG 284
+ IHRD+ A N LL KI DFGMAR + +A+ R G
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 225
Query: 285 YMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNR-TL 343
+M PE +EGIF+ K+D +SFGVLL EI S LGY+ SN+ L
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYMPYPSKSNQEVL 270
Query: 344 ELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRP 380
E + D K I C Q +DRP
Sbjct: 271 EFVTSGGRMD--PPKNCPGPVYRIMTQCWQHQPEDRP 305
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 123/277 (44%), Gaps = 43/277 (15%)
Query: 123 LGEGGFGPVYKGVLRKGD------EIAVKRLSG-RSEQGLREMKNEASVIAKVQHKNLVR 175
LG G FG VY+G + ++AVK L SEQ + EA +I+K+ H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFD----PTKRILLDWVTRVQIIEGIAQGLLYLH 231
+G + + ++ E M L FL + P++ L + + + IA G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 232 QYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRIVGT----YG 284
+ IHRD+ A N LL KI DFGMAR + +A+ R G
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 225
Query: 285 YMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNR-TL 343
+M PE +EGIF+ K+D +SFGVLL EI S LGY+ SN+ L
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYMPYPSKSNQEVL 270
Query: 344 ELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRP 380
E + D K I C Q +DRP
Sbjct: 271 EFVTSGGRMD--PPKNCPGPVYRIMTQCWQHQPEDRP 305
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 135/315 (42%), Gaps = 51/315 (16%)
Query: 93 RSKKKEVDQLPLFSFSSVSTATNTFSDTNK--------LGEGGFGPVYKGVLRKGD---- 140
R+ D P + F+ +++ + + + LG G FG VY+G +
Sbjct: 17 RTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 76
Query: 141 --EIAVKRLSG-RSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKS 197
++AVK L SEQ + EA +I+K H+N+VR +G + + ++ E M
Sbjct: 77 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 136
Query: 198 LDFFLFD----PTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILL--- 250
L FL + P++ L + + + IA G YL + IHRD+ A N LL
Sbjct: 137 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP 193
Query: 251 DKDMNPKISDFGMARICGGNELQANTSRIVGT----YGYMSPEYALEGIFSIKSDVFSFG 306
KI DFGMAR + +A+ R G +M PE +EGIF+ K+D +SFG
Sbjct: 194 GPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 249
Query: 307 VLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNR-TLELIDDPVLEDEYSSKQVLLRYV 365
VLL EI S LGY+ SN+ LE + D K
Sbjct: 250 VLLWEIFS---------------LGYMPYPSKSNQEVLEFVTSGGRMD--PPKNCPGPVY 292
Query: 366 NIALLCVQESADDRP 380
I C Q +DRP
Sbjct: 293 RIMTQCWQHQPEDRP 307
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 122/277 (44%), Gaps = 43/277 (15%)
Query: 123 LGEGGFGPVYKGVLRKGD------EIAVKRLSG-RSEQGLREMKNEASVIAKVQHKNLVR 175
LG G FG VY+G + ++AVK L SEQ + EA +I+K H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFD----PTKRILLDWVTRVQIIEGIAQGLLYLH 231
+G + + ++ E M L FL + P++ L + + + IA G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 232 QYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRIVGT----YG 284
+ IHRD+ A N LL KI DFGMAR + +A+ R G
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 210
Query: 285 YMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNR-TL 343
+M PE +EGIF+ K+D +SFGVLL EI S LGY+ SN+ L
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYMPYPSKSNQEVL 255
Query: 344 ELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRP 380
E + D K I C Q +DRP
Sbjct: 256 EFVTSGGRMD--PPKNCPGPVYRIMTQCWQHQPEDRP 290
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 134/291 (46%), Gaps = 36/291 (12%)
Query: 122 KLGEGGFGPVYKGVLR---KGD---EIAVKRLSGRSEQGLR-EMKNEASVIAKVQHKNLV 174
+LG+G FG VY+G R KG+ +AVK ++ + R E NEASV+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTK-----RILLDWVTRVQIIEGIAQGL 227
RLLG +++ E M + L +L P R +Q+ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMS 287
YL+ + +HRDL A N ++ D KI DFGM R + + + +M+
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELID 347
PE +G+F+ SD++SFGV+L EI S L + ++ + L+ +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS--------------LAEQPYQGLSNEQVLKFVM 246
Query: 348 DPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHP 398
D D+ R ++ +C Q + RPT ++V++L ++ LHP
Sbjct: 247 DGGYLDQ--PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD---LHP 292
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 127/279 (45%), Gaps = 24/279 (8%)
Query: 123 LGEGGFG--------PVYKGVLRKGDEIAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNL 173
LGEG FG P G G+ +AVK L R K E ++ + H+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 174 VRLLGCCIDKDEKIL--IYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLH 231
++ GCC D+ EK L + EY+P SL +L P I L + + I +G+ YLH
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGL--AQLLLFAQQICEGMAYLH 134
Query: 232 QYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEY 290
IHR+L A N+LLD D KI DFG+A+ + G+E + +PE
Sbjct: 135 S---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPV 350
E F SDV+SFGV L E+++ ++ T L L+G T R EL++
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG- 250
Query: 351 LEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
E + ++ C + A RPT +++ +L
Sbjct: 251 -ERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPIL 288
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 122/277 (44%), Gaps = 43/277 (15%)
Query: 123 LGEGGFGPVYKGVLRKGD------EIAVKRLSG-RSEQGLREMKNEASVIAKVQHKNLVR 175
LG G FG VY+G + ++AVK L SEQ + EA +I+K H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFD----PTKRILLDWVTRVQIIEGIAQGLLYLH 231
+G + + ++ E M L FL + P++ L + + + IA G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 232 QYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRIVGT----YG 284
+ IHRD+ A N LL KI DFGMAR + +A+ R G
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 210
Query: 285 YMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNR-TL 343
+M PE +EGIF+ K+D +SFGVLL EI S LGY+ SN+ L
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYMPYPSKSNQEVL 255
Query: 344 ELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRP 380
E + D K I C Q +DRP
Sbjct: 256 EFVTSGGRMD--PPKNCPGPVYRIMTQCWQHQPEDRP 290
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 127/279 (45%), Gaps = 24/279 (8%)
Query: 123 LGEGGFG--------PVYKGVLRKGDEIAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNL 173
LGEG FG P G G+ +AVK L R K E ++ + H+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 174 VRLLGCCIDKDEKIL--IYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLH 231
++ GCC D+ EK L + EY+P SL +L P I L + + I +G+ YLH
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGL--AQLLLFAQQICEGMAYLH 134
Query: 232 QYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEY 290
IHR+L A N+LLD D KI DFG+A+ + G+E + +PE
Sbjct: 135 A---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPV 350
E F SDV+SFGV L E+++ ++ T L L+G T R EL++
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG- 250
Query: 351 LEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
E + ++ C + A RPT +++ +L
Sbjct: 251 -ERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPIL 288
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 134/315 (42%), Gaps = 51/315 (16%)
Query: 93 RSKKKEVDQLPLFSFSSVSTATNTFSDTNK--------LGEGGFGPVYKGVLRKGD---- 140
R+ D P + F+ +++ + + + LG G FG VY+G +
Sbjct: 18 RTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 77
Query: 141 --EIAVKRLSG-RSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKS 197
++AVK L SEQ + EA +I+K H+N+VR +G + + ++ E M
Sbjct: 78 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 137
Query: 198 LDFFLFD----PTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILL--- 250
L FL + P++ L + + + IA G YL + IHRD+ A N LL
Sbjct: 138 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP 194
Query: 251 DKDMNPKISDFGMARICGGNELQANTSRIVGT----YGYMSPEYALEGIFSIKSDVFSFG 306
KI DFGMAR + +A R G +M PE +EGIF+ K+D +SFG
Sbjct: 195 GPGRVAKIGDFGMAR----DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 250
Query: 307 VLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNR-TLELIDDPVLEDEYSSKQVLLRYV 365
VLL EI S LGY+ SN+ LE + D K
Sbjct: 251 VLLWEIFS---------------LGYMPYPSKSNQEVLEFVTSGGRMD--PPKNCPGPVY 293
Query: 366 NIALLCVQESADDRP 380
I C Q +DRP
Sbjct: 294 RIMTQCWQHQPEDRP 308
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 17/217 (7%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGVLRK--GDE----IAVKRLSGRSEQGLR-EMKNEASV 164
A + + +LG+G FG VY+GV + DE +A+K ++ + R E NEASV
Sbjct: 7 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 165 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWV-------TRV 217
+ + ++VRLLG ++I E M L +L + + V +
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 218 QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTS 277
Q+ IA G+ YL+ + +HRDL A N ++ +D KI DFGM R +
Sbjct: 127 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGG 183
Query: 278 RIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ + +MSPE +G+F+ SDV+SFGV+L EI +
Sbjct: 184 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 122/277 (44%), Gaps = 43/277 (15%)
Query: 123 LGEGGFGPVYKGVLRKGD------EIAVKRLSG-RSEQGLREMKNEASVIAKVQHKNLVR 175
LG G FG VY+G + ++AVK L SEQ + EA +I+K H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFD----PTKRILLDWVTRVQIIEGIAQGLLYLH 231
+G + + ++ E M L FL + P++ L + + + IA G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 232 QYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRIVGT----YG 284
+ IHRD+ A N LL KI DFGMAR + +A+ R G
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 225
Query: 285 YMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNR-TL 343
+M PE +EGIF+ K+D +SFGVLL EI S LGY+ SN+ L
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYMPYPSKSNQEVL 270
Query: 344 ELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRP 380
E + D K I C Q +DRP
Sbjct: 271 EFVTSGGRMD--PPKNCPGPVYRIMTQCWQHQPEDRP 305
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 17/216 (7%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRK--GDE----IAVKRLSGRSEQGLR-EMKNEASVI 165
A + + +LG+G FG VY+GV + DE +A+K ++ + R E NEASV+
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 166 AKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWV-------TRVQ 218
+ ++VRLLG ++I E M L +L + + V +Q
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 219 IIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
+ IA G+ YL+ + +HRDL A N ++ +D KI DFGM R + +
Sbjct: 137 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 193
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ +MSPE +G+F+ SDV+SFGV+L EI +
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 109/201 (54%), Gaps = 10/201 (4%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
F KLGEG +G VYK + ++ G +A+K++ S+ L+E+ E S++ + ++V+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVK 88
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
G + ++ EY S+ + K + D + I++ +GL YLH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT--ILQSTLKGLEYLH---F 143
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
+R IHRD+KA NILL+ + + K++DFG+A + A + ++GT +M+PE E
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 296 FSIKSDVFSFGVLLLEIVSGK 316
++ +D++S G+ +E+ GK
Sbjct: 202 YNCVADIWSLGITAIEMAEGK 222
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 136/315 (43%), Gaps = 51/315 (16%)
Query: 93 RSKKKEVDQLPLFSFSSVSTATNTFSDTNK--------LGEGGFGPVYKGVLRKGD---- 140
R+ D P +SF+ +++ + + + LG G FG VY+G +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 141 --EIAVKRLSG-RSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKS 197
++AVK L SEQ + EA +I+K H+N+VR +G + + ++ E M
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 198 LDFFLFD----PTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILL--- 250
L FL + P++ L + + + IA G YL + IHRD+ A N LL
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP 177
Query: 251 DKDMNPKISDFGMARICGGNELQANTSRIVGT----YGYMSPEYALEGIFSIKSDVFSFG 306
KI DFGMA+ + +A+ R G +M PE +EGIF+ K+D +SFG
Sbjct: 178 GPGRVAKIGDFGMAQ----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 233
Query: 307 VLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNR-TLELIDDPVLEDEYSSKQVLLRYV 365
VLL EI S LGY+ SN+ LE + D K
Sbjct: 234 VLLWEIFS---------------LGYMPYPSKSNQEVLEFVTSGGRMD--PPKNCPGPVY 276
Query: 366 NIALLCVQESADDRP 380
I C Q +DRP
Sbjct: 277 RIMTQCWQHQPEDRP 291
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 134/291 (46%), Gaps = 36/291 (12%)
Query: 122 KLGEGGFGPVYKGVLR---KGD---EIAVKRLSGRSEQGLR-EMKNEASVIAKVQHKNLV 174
+LG+G FG VY+G R KG+ +AVK ++ + R E NEASV+ ++V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTK-----RILLDWVTRVQIIEGIAQGL 227
RLLG +++ E M + L +L P R +Q+ IA G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMS 287
YL+ + +HRDL A N ++ D KI DFGM R + + + +M+
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELID 347
PE +G+F+ SD++SFGV+L EI S L + ++ + L+ +
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITS--------------LAEQPYQGLSNEQVLKFVM 245
Query: 348 DPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHP 398
D D+ R ++ +C Q + RPT ++V++L ++ LHP
Sbjct: 246 DGGYLDQ--PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD---LHP 291
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 122/277 (44%), Gaps = 43/277 (15%)
Query: 123 LGEGGFGPVYKGVLRKGD------EIAVKRLSG-RSEQGLREMKNEASVIAKVQHKNLVR 175
LG G FG VY+G + ++AVK L SEQ + EA +I+K H+N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFD----PTKRILLDWVTRVQIIEGIAQGLLYLH 231
+G + + ++ E M L FL + P++ L + + + IA G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 232 QYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRIVGT----YG 284
+ IHRD+ A N LL KI DFGMAR + +A+ R G
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 202
Query: 285 YMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNR-TL 343
+M PE +EGIF+ K+D +SFGVLL EI S LGY+ SN+ L
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYMPYPSKSNQEVL 247
Query: 344 ELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRP 380
E + D K I C Q +DRP
Sbjct: 248 EFVTSGGRMD--PPKNCPGPVYRIMTQCWQHQPEDRP 282
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 134/315 (42%), Gaps = 51/315 (16%)
Query: 93 RSKKKEVDQLPLFSFSSVSTATNTFSDTNK--------LGEGGFGPVYKGVLRKGD---- 140
R+ D P + F+ +++ + + + LG G FG VY+G +
Sbjct: 41 RTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 100
Query: 141 --EIAVKRLSG-RSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKS 197
++AVK L SEQ + EA +I+K H+N+VR +G + + ++ E M
Sbjct: 101 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 160
Query: 198 LDFFLFD----PTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILL--- 250
L FL + P++ L + + + IA G YL + IHRD+ A N LL
Sbjct: 161 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP 217
Query: 251 DKDMNPKISDFGMARICGGNELQANTSRIVGT----YGYMSPEYALEGIFSIKSDVFSFG 306
KI DFGMAR + +A R G +M PE +EGIF+ K+D +SFG
Sbjct: 218 GPGRVAKIGDFGMAR----DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFG 273
Query: 307 VLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNR-TLELIDDPVLEDEYSSKQVLLRYV 365
VLL EI S LGY+ SN+ LE + D K
Sbjct: 274 VLLWEIFS---------------LGYMPYPSKSNQEVLEFVTSGGRMD--PPKNCPGPVY 316
Query: 366 NIALLCVQESADDRP 380
I C Q +DRP
Sbjct: 317 RIMTQCWQHQPEDRP 331
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 131/293 (44%), Gaps = 51/293 (17%)
Query: 123 LGEGGFGPVYKGVL-----RKG-DEIAVKRL-SGRSEQGLREMKNEASVIAKVQHKNLVR 175
LGEG FG V K R G +AVK L S LR++ +E +V+ +V H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK-------------RILLDWVTRVQIIEG 222
L G C +LI EY SL FL + K LD + G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 223 --------IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA 274
I+QG+ YL + ++++HRDL A NIL+ + KISDFG++R +
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 275 NTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS--GKKNTGLYRTDSLNLLGY 332
S+ +M+ E + I++ +SDV+SFGVLL EIV+ G G+ NLL
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL-- 265
Query: 333 VWDLWTSNRTLELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDV 385
+ +E D+ E+ Y + L C ++ D RP D+
Sbjct: 266 -----KTGHRMERPDN-CSEEMY----------RLMLQCWKQEPDKRPVFADI 302
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 135/268 (50%), Gaps = 39/268 (14%)
Query: 138 KGDEIAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNK 196
K +++A+KR++ + + + E+ E +++ H N+V + KDE L+ + +
Sbjct: 34 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 93
Query: 197 SLDFFLFDPTKRIL---------LDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASN 247
S+ D K I+ LD T I+ + +GL YLH+ + IHRD+KA N
Sbjct: 94 SV----LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGN 146
Query: 248 ILLDKDMNPKISDFGM-ARICGGNELQANTSR--IVGTYGYMSPEYALEGI--FSIKSDV 302
ILL +D + +I+DFG+ A + G ++ N R VGT +M+PE +E + + K+D+
Sbjct: 147 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE-VMEQVRGYDFKADI 205
Query: 303 FSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSKQVLL 362
+SFG+ +E+ +G Y + +L TL+ D P LE K++L
Sbjct: 206 WSFGITAIELATGAAPYHKYPPMKVLML-----------TLQ-NDPPSLETGVQDKEMLK 253
Query: 363 RY----VNIALLCVQESADDRPTMNDVV 386
+Y + LC+Q+ + RPT +++
Sbjct: 254 KYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 130/293 (44%), Gaps = 51/293 (17%)
Query: 123 LGEGGFGPVYKGVL-----RKG-DEIAVKRL-SGRSEQGLREMKNEASVIAKVQHKNLVR 175
LGEG FG V K R G +AVK L S LR++ +E +V+ +V H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK-------------RILLDWVTRVQIIEG 222
L G C +LI EY SL FL + K LD + G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 223 --------IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA 274
I+QG+ YL + S ++HRDL A NIL+ + KISDFG++R +
Sbjct: 151 DLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 275 NTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS--GKKNTGLYRTDSLNLLGY 332
S+ +M+ E + I++ +SDV+SFGVLL EIV+ G G+ NLL
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL-- 265
Query: 333 VWDLWTSNRTLELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDV 385
+ +E D+ E+ Y + L C ++ D RP D+
Sbjct: 266 -----KTGHRMERPDN-CSEEMY----------RLMLQCWKQEPDKRPVFADI 302
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 133/291 (45%), Gaps = 36/291 (12%)
Query: 122 KLGEGGFGPVYKGVLR---KGD---EIAVKRLSGRSEQGLR-EMKNEASVIAKVQHKNLV 174
+LG+G FG VY+G R KG+ +AVK ++ + R E NEASV+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTK-----RILLDWVTRVQIIEGIAQGL 227
RLLG +++ E M + L +L P R +Q+ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMS 287
YL+ + +HRDL A N ++ D KI DFGM R + + +M+
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELID 347
PE +G+F+ SD++SFGV+L EI S L + ++ + L+ +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS--------------LAEQPYQGLSNEQVLKFVM 246
Query: 348 DPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHP 398
D D+ R ++ +C Q + RPT ++V++L ++ LHP
Sbjct: 247 DGGYLDQ--PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD---LHP 292
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 17/217 (7%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGVLRK--GDE----IAVKRLSGRSEQGLR-EMKNEASV 164
A + + +LG+G FG VY+GV + DE +A+K ++ + R E NEASV
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 165 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWV-------TRV 217
+ + ++VRLLG ++I E M L +L + + V +
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 218 QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTS 277
Q+ IA G+ YL+ + +HRDL A N ++ +D KI DFGM R +
Sbjct: 142 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 198
Query: 278 RIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ + +MSPE +G+F+ SDV+SFGV+L EI +
Sbjct: 199 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 131/293 (44%), Gaps = 51/293 (17%)
Query: 123 LGEGGFGPVYKGVL-----RKG-DEIAVKRL-SGRSEQGLREMKNEASVIAKVQHKNLVR 175
LGEG FG V K R G +AVK L S LR++ +E +V+ +V H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK-------------RILLDWVTRVQIIEG 222
L G C +LI EY SL FL + K LD + G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 223 --------IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA 274
I+QG+ YL + ++++HRDL A NIL+ + KISDFG++R +
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 275 NTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS--GKKNTGLYRTDSLNLLGY 332
S+ +M+ E + I++ +SDV+SFGVLL EIV+ G G+ NLL
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL-- 265
Query: 333 VWDLWTSNRTLELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDV 385
+ +E D+ E+ Y + L C ++ D RP D+
Sbjct: 266 -----KTGHRMERPDN-CSEEMY----------RLMLQCWKQEPDKRPVFADI 302
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 135/268 (50%), Gaps = 39/268 (14%)
Query: 138 KGDEIAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNK 196
K +++A+KR++ + + + E+ E +++ H N+V + KDE L+ + +
Sbjct: 39 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98
Query: 197 SLDFFLFDPTKRIL---------LDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASN 247
S+ D K I+ LD T I+ + +GL YLH+ + IHRD+KA N
Sbjct: 99 SV----LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGN 151
Query: 248 ILLDKDMNPKISDFGM-ARICGGNELQANTSR--IVGTYGYMSPEYALEGI--FSIKSDV 302
ILL +D + +I+DFG+ A + G ++ N R VGT +M+PE +E + + K+D+
Sbjct: 152 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE-VMEQVRGYDFKADI 210
Query: 303 FSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEYSSKQVLL 362
+SFG+ +E+ +G Y + +L TL+ D P LE K++L
Sbjct: 211 WSFGITAIELATGAAPYHKYPPMKVLML-----------TLQ-NDPPSLETGVQDKEMLK 258
Query: 363 RY----VNIALLCVQESADDRPTMNDVV 386
+Y + LC+Q+ + RPT +++
Sbjct: 259 KYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 125/279 (44%), Gaps = 24/279 (8%)
Query: 123 LGEGGFG--------PVYKGVLRKGDEIAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNL 173
LGEG FG P G G+ +AVK L LR + E ++ + H+++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 174 VRLLGCCIDKDEKI--LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLH 231
V+ GCC D+ EK L+ EY+P SL +L R + + + I +G+ YLH
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLH 128
Query: 232 QYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEY 290
IHR L A N+LLD D KI DFG+A+ + G+E + +PE
Sbjct: 129 A---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 185
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPV 350
E F SDV+SFGV L E+++ + T L+G+ T R EL++
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERG- 244
Query: 351 LEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
E + ++ C + A RPT ++V +L
Sbjct: 245 -ERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 282
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 125/279 (44%), Gaps = 24/279 (8%)
Query: 123 LGEGGFG--------PVYKGVLRKGDEIAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNL 173
LGEG FG P G G+ +AVK L LR + E ++ + H+++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 174 VRLLGCCIDKDEKI--LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLH 231
V+ GCC D+ EK L+ EY+P SL +L R + + + I +G+ YLH
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLH 129
Query: 232 QYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEY 290
IHR L A N+LLD D KI DFG+A+ + G+E + +PE
Sbjct: 130 A---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 186
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPV 350
E F SDV+SFGV L E+++ + T L+G+ T R EL++
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERG- 245
Query: 351 LEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
E + ++ C + A RPT ++V +L
Sbjct: 246 -ERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 283
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 17/217 (7%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGVLRK--GDE----IAVKRLSGRSEQGLR-EMKNEASV 164
A + + +LG+G FG VY+GV + DE +A+K ++ + R E NEASV
Sbjct: 12 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 71
Query: 165 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWV-------TRV 217
+ + ++VRLLG ++I E M L +L + + V +
Sbjct: 72 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 218 QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTS 277
Q+ IA G+ YL+ + +HRDL A N ++ +D KI DFGM R +
Sbjct: 132 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 188
Query: 278 RIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ + +MSPE +G+F+ SDV+SFGV+L EI +
Sbjct: 189 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 17/217 (7%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGVLRK--GDE----IAVKRLSGRSEQGLR-EMKNEASV 164
A + + +LG+G FG VY+GV + DE +A+K ++ + R E NEASV
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 165 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWV-------TRV 217
+ + ++VRLLG ++I E M L +L + + V +
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 141
Query: 218 QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTS 277
Q+ IA G+ YL+ + +HRDL A N ++ +D KI DFGM R +
Sbjct: 142 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 198
Query: 278 RIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ + +MSPE +G+F+ SDV+SFGV+L EI +
Sbjct: 199 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 17/217 (7%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGVLRK--GDE----IAVKRLSGRSEQGLR-EMKNEASV 164
A + + +LG+G FG VY+GV + DE +A+K ++ + R E NEASV
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 165 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWV-------TRV 217
+ + ++VRLLG ++I E M L +L + + V +
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 218 QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTS 277
Q+ IA G+ YL+ + +HRDL A N ++ +D KI DFGM R +
Sbjct: 135 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 278 RIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ + +MSPE +G+F+ SDV+SFGV+L EI +
Sbjct: 192 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 17/217 (7%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGVLRK--GDE----IAVKRLSGRSEQGLR-EMKNEASV 164
A + + +LG+G FG VY+GV + DE +A+K ++ + R E NEASV
Sbjct: 15 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 165 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWV-------TRV 217
+ + ++VRLLG ++I E M L +L + + V +
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 218 QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTS 277
Q+ IA G+ YL+ + +HRDL A N ++ +D KI DFGM R +
Sbjct: 135 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 278 RIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ + +MSPE +G+F+ SDV+SFGV+L EI +
Sbjct: 192 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 135/291 (46%), Gaps = 36/291 (12%)
Query: 122 KLGEGGFGPVYKGVLR---KGD---EIAVKRLSGRSEQGLR-EMKNEASVIAKVQHKNLV 174
+LG+G FG VY+G R KG+ +AVK ++ + R E NEASV+ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTK-----RILLDWVTRVQIIEGIAQGL 227
RLLG +++ E M + L +L P R +Q+ IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMS 287
YL+ + +HR+L A N ++ D KI DFGM R + + + +M+
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELID 347
PE +G+F+ SD++SFGV+L EI S L + ++ + L+ +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS--------------LAEQPYQGLSNEQVLKFVM 246
Query: 348 DPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHP 398
D D+ R ++ +C Q + + RPT ++V++L ++ LHP
Sbjct: 247 DGGYLDQ--PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD---LHP 292
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 17/217 (7%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGVLRK--GDE----IAVKRLSGRSEQGLR-EMKNEASV 164
A + + +LG+G FG VY+GV + DE +A+K ++ + R E NEASV
Sbjct: 13 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 72
Query: 165 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWV-------TRV 217
+ + ++VRLLG ++I E M L +L + + V +
Sbjct: 73 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 218 QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTS 277
Q+ IA G+ YL+ + +HRDL A N ++ +D KI DFGM R +
Sbjct: 133 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 189
Query: 278 RIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ + +MSPE +G+F+ SDV+SFGV+L EI +
Sbjct: 190 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 135/291 (46%), Gaps = 36/291 (12%)
Query: 122 KLGEGGFGPVYKGVLR---KGD---EIAVKRLSGRSEQGLR-EMKNEASVIAKVQHKNLV 174
+LG+G FG VY+G R KG+ +AVK ++ + R E NEASV+ ++V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTK-----RILLDWVTRVQIIEGIAQGL 227
RLLG +++ E M + L +L P R +Q+ IA G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMS 287
YL+ + +HR+L A N ++ D KI DFGM R + + + +M+
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELID 347
PE +G+F+ SD++SFGV+L EI S L + ++ + L+ +
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITS--------------LAEQPYQGLSNEQVLKFVM 247
Query: 348 DPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEAAALHP 398
D D+ R ++ +C Q + + RPT ++V++L ++ LHP
Sbjct: 248 DGGYLDQ--PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD---LHP 293
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 110/203 (54%), Gaps = 21/203 (10%)
Query: 123 LGEGGFGPVYKGVLR---KGD-EIAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLL 177
+G G FG V G L+ K D +A+K L G +E+ R+ EAS++ + H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G +++ E+M N +LD FL + + + V ++ GIA G+ YL + +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV--IQLVGMLRGIAAGMRYL---ADMG 165
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG------YMSPEYA 291
+HRDL A NIL++ ++ K+SDFG++R+ ++ + + T G + +PE
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRV-----IEDDPEAVYTTTGGKIPVRWTAPEAI 220
Query: 292 LEGIFSIKSDVFSFGVLLLEIVS 314
F+ SDV+S+G+++ E++S
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMS 243
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 17/217 (7%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGVLRK--GDE----IAVKRLSGRSEQGLR-EMKNEASV 164
A + + +LG+G FG VY+GV + DE +A+K ++ + R E NEASV
Sbjct: 16 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 165 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWV-------TRV 217
+ + ++VRLLG ++I E M L +L + + V +
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 218 QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTS 277
Q+ IA G+ YL+ + +HRDL A N ++ +D KI DFGM R +
Sbjct: 136 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 192
Query: 278 RIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ + +MSPE +G+F+ SDV+SFGV+L EI +
Sbjct: 193 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 17/217 (7%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGVLRK--GDE----IAVKRLSGRSEQGLR-EMKNEASV 164
A + + +LG+G FG VY+GV + DE +A+K ++ + R E NEASV
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 165 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWV-------TRV 217
+ + ++VRLLG ++I E M L +L + + V +
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 218 QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTS 277
Q+ IA G+ YL+ + +HRDL A N ++ +D KI DFGM R +
Sbjct: 129 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 185
Query: 278 RIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ + +MSPE +G+F+ SDV+SFGV+L EI +
Sbjct: 186 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 17/217 (7%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGVLRK--GDE----IAVKRLSGRSEQGLR-EMKNEASV 164
A + + +LG+G FG VY+GV + DE +A+K ++ + R E NEASV
Sbjct: 44 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 103
Query: 165 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWV-------TRV 217
+ + ++VRLLG ++I E M L +L + + V +
Sbjct: 104 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 163
Query: 218 QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTS 277
Q+ IA G+ YL+ + +HRDL A N ++ +D KI DFGM R +
Sbjct: 164 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG 220
Query: 278 RIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ + +MSPE +G+F+ SDV+SFGV+L EI +
Sbjct: 221 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 38/276 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCID 182
+G G FG V K R D +A+K++ SE+ + E +++V H N+V+L G C++
Sbjct: 17 VGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLN 73
Query: 183 KDEKILIYEYMPNKSLDFFLF--DP----TKRILLDWVTRVQIIEGIAQGLLYLHQYSRV 236
L+ EY SL L +P T + W + +QG+ YLH
Sbjct: 74 P--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQC------SQGVAYLHSMQPK 125
Query: 237 RIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
+IHRDLK N+LL KI DFG A ++Q + + G+ +M+PE
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSN 180
Query: 296 FSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEY 355
+S K DVFS+G++L E+++ +K + ++ W + R P++++
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM---WAVHNGTRP------PLIKNLP 231
Query: 356 SSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTN 391
+ L+ C + RP+M ++V ++T+
Sbjct: 232 KPIESLM------TRCWSKDPSQRPSMEEIVKIMTH 261
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 38/276 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCID 182
+G G FG V K R D +A+K++ SE+ + E +++V H N+V+L G C++
Sbjct: 16 VGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 183 KDEKILIYEYMPNKSLDFFLF--DP----TKRILLDWVTRVQIIEGIAQGLLYLHQYSRV 236
L+ EY SL L +P T + W + +QG+ YLH
Sbjct: 73 P--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQC------SQGVAYLHSMQPK 124
Query: 237 RIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
+IHRDLK N+LL KI DFG A ++Q + + G+ +M+PE
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSN 179
Query: 296 FSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDPVLEDEY 355
+S K DVFS+G++L E+++ +K + ++ W + R P++++
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM---WAVHNGTRP------PLIKNLP 230
Query: 356 SSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTN 391
+ L+ C + RP+M ++V ++T+
Sbjct: 231 KPIESLM------TRCWSKDPSQRPSMEEIVKIMTH 260
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 116/213 (54%), Gaps = 16/213 (7%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMK-NEASVIAKVQ 169
++++ F KLG G + VYKG+ + G +A+K + SE+G E S++ +++
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPN---KSLDFFLFDPTKRIL-LDWVTRVQIIEGIAQ 225
H+N+VRL +++ L++E+M N K +D T R L L+ V Q + Q
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQW--QLLQ 119
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANT-SRIVGTYG 284
GL + H+ +I+HRDLK N+L++K K+ DFG+AR G + NT S V T
Sbjct: 120 GLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG---IPVNTFSSEVVTLW 173
Query: 285 YMSPEYALEG-IFSIKSDVFSFGVLLLEIVSGK 316
Y +P+ + +S D++S G +L E+++GK
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 106/204 (51%), Gaps = 11/204 (5%)
Query: 117 FSDTNKLGEGGFGPVYKG-VLRKGDEIAVKRLSGRS--EQGL-REMKNEASVIAKVQHKN 172
F N LG+G F VY+ + G E+A+K + ++ + G+ + ++NE + +++H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
++ L D + L+ E N ++ +L + K + + I G+LYLH
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR--HFMHQIITGMLYLHS 130
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL 292
+ I+HRDL SN+LL ++MN KI+DFG+A + T + GT Y+SPE A
Sbjct: 131 HG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIAT 185
Query: 293 EGIFSIKSDVFSFGVLLLEIVSGK 316
++SDV+S G + ++ G+
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 17/217 (7%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGVLRK--GDE----IAVKRLSGRSEQGLR-EMKNEASV 164
A + + +LG+G FG VY+GV + DE +A+K ++ + R E NEASV
Sbjct: 9 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 165 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWV-------TRV 217
+ + ++VRLLG ++I E M L +L + + V +
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 218 QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTS 277
Q+ IA G+ YL+ + +HRDL A N + +D KI DFGM R +
Sbjct: 129 QMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGG 185
Query: 278 RIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ + +MSPE +G+F+ SDV+SFGV+L EI +
Sbjct: 186 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 12/215 (5%)
Query: 104 LFSFSSVSTATNTFSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKNEA 162
L S SV ++ K+G+G G VY + + G E+A+++++ + + + NE
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 163 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG 222
V+ + ++ N+V L + DE ++ EY+ SL D +D +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGM-ARICGGNELQANTSRIVG 281
Q L +LH ++IHRD+K+ NILL D + K++DFG A+I Q+ S +VG
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSEMVG 178
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
T +M+PE + K D++S G++ +E++ G+
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 12/215 (5%)
Query: 104 LFSFSSVSTATNTFSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKNEA 162
L S SV ++ K+G+G G VY + + G E+A+++++ + + + NE
Sbjct: 10 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 163 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG 222
V+ + ++ N+V L + DE ++ EY+ SL D +D +
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 125
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGM-ARICGGNELQANTSRIVG 281
Q L +LH ++IHRD+K+ NILL D + K++DFG A+I Q+ S +VG
Sbjct: 126 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSXMVG 179
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
T +M+PE + K D++S G++ +E++ G+
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 127/271 (46%), Gaps = 31/271 (11%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+LG G FG V G R ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ +I EYM N L +L + R + +++ + + + + YL + +H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--LEMCKDVCEAMEYLES---KQFLH 143
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG--YMSPEYALEGIFSI 298
RDL A N L++ K+SDFG++R +E TS + + + PE + FS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---ETSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 299 KSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDP--VLEDEYS 356
KSD+++FGVL+ EI SL + Y + +T++ T E I + +
Sbjct: 201 KSDIWAFGVLMWEIY------------SLGKMPY--ERFTNSETAEHIAQGLRLYRPHLA 246
Query: 357 SKQVLLRYVNIALLCVQESADDRPTMNDVVS 387
S++V I C E AD+RPT ++S
Sbjct: 247 SEKV----YTIMYSCWHEKADERPTFKILLS 273
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 12/215 (5%)
Query: 104 LFSFSSVSTATNTFSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKNEA 162
L S SV ++ K+G+G G VY + + G E+A+++++ + + + NE
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 163 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG 222
V+ + ++ N+V L + DE ++ EY+ SL D +D +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGM-ARICGGNELQANTSRIVG 281
Q L +LH ++IHRD+K+ NILL D + K++DFG A+I Q+ S +VG
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSTMVG 178
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
T +M+PE + K D++S G++ +E++ G+
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 126/271 (46%), Gaps = 31/271 (11%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+LG G FG V G R ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ +I EYM N L +L + R + +++ + + + + YL + +H
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--LEMCKDVCEAMEYLES---KQFLH 123
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG--YMSPEYALEGIFSI 298
RDL A N L++ K+SDFG++R +E TS + + + PE + FS
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVRWSPPEVLMYSKFSS 180
Query: 299 KSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDP--VLEDEYS 356
KSD+++FGVL+ EI S K ++ +T++ T E I + +
Sbjct: 181 KSDIWAFGVLMWEIYSLGKMP--------------YERFTNSETAEHIAQGLRLYRPHLA 226
Query: 357 SKQVLLRYVNIALLCVQESADDRPTMNDVVS 387
S++V I C E AD+RPT ++S
Sbjct: 227 SEKVY----TIMYSCWHEKADERPTFKILLS 253
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 127/271 (46%), Gaps = 31/271 (11%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+LG G FG V G R ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ +I EYM N L +L + R + +++ + + + + YL + +H
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--LEMCKDVCEAMEYLES---KQFLH 127
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG--YMSPEYALEGIFSI 298
RDL A N L++ K+SDFG++R +E TS + + + PE + FS
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVRWSPPEVLMYSKFSS 184
Query: 299 KSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDP--VLEDEYS 356
KSD+++FGVL+ EI SL + Y + +T++ T E I + +
Sbjct: 185 KSDIWAFGVLMWEIY------------SLGKMPY--ERFTNSETAEHIAQGLRLYRPHLA 230
Query: 357 SKQVLLRYVNIALLCVQESADDRPTMNDVVS 387
S++V I C E AD+RPT ++S
Sbjct: 231 SEKVY----TIMYSCWHEKADERPTFKILLS 257
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 12/215 (5%)
Query: 104 LFSFSSVSTATNTFSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKNEA 162
L S SV ++ K+G+G G VY + + G E+A+++++ + + + NE
Sbjct: 9 LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 163 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG 222
V+ + ++ N+V L + DE ++ EY+ SL D +D +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGM-ARICGGNELQANTSRIVG 281
Q L +LH ++IHRD+K+ NILL D + K++DFG A+I Q+ S +VG
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSXMVG 178
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
T +M+PE + K D++S G++ +E++ G+
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 126/271 (46%), Gaps = 31/271 (11%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+LG G FG V G R ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ +I EYM N L +L + R + +++ + + + + YL + +H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--LEMCKDVCEAMEYLES---KQFLH 128
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG--YMSPEYALEGIFSI 298
RDL A N L++ K+SDFG++R +E TS + + + PE + FS
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVRWSPPEVLMYSKFSS 185
Query: 299 KSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDP--VLEDEYS 356
KSD+++FGVL+ EI S K ++ +T++ T E I + +
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMP--------------YERFTNSETAEHIAQGLRLYRPHLA 231
Query: 357 SKQVLLRYVNIALLCVQESADDRPTMNDVVS 387
S++V I C E AD+RPT ++S
Sbjct: 232 SEKV----YTIMYSCWHEKADERPTFKILLS 258
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 127/281 (45%), Gaps = 28/281 (9%)
Query: 123 LGEGGFG--------PVYKGVLRKGDEIAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNL 173
LGEG FG P G G+ +AVK L + R K E ++ + H+++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 174 VRLLGCCIDKDEKIL--IYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLH 231
++ GCC D L + EY+P SL +L P I L + + I +G+ YLH
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGL--AQLLLFAQQICEGMAYLH 151
Query: 232 QYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEY 290
IHRDL A N+LLD D KI DFG+A+ + G+E + +PE
Sbjct: 152 A---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC 208
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELID--D 348
E F SDV+SFGV L E+++ ++ T L L+G T R EL++ +
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268
Query: 349 PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
+ + +V N C + A RPT +++ +L
Sbjct: 269 RLPRPDKCPAEVYHLMKN----CWETEASFRPTFENLIPIL 305
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 127/271 (46%), Gaps = 31/271 (11%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+LG G FG V G R ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ +I EYM N L +L + R + +++ + + + + YL + +H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--LEMCKDVCEAMEYLES---KQFLH 143
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG--YMSPEYALEGIFSI 298
RDL A N L++ K+SDFG++R +E TS + + + PE + FS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 299 KSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDP--VLEDEYS 356
KSD+++FGVL+ EI SL + Y + +T++ T E I + +
Sbjct: 201 KSDIWAFGVLMWEIY------------SLGKMPY--ERFTNSETAEHIAQGLRLYRPHLA 246
Query: 357 SKQVLLRYVNIALLCVQESADDRPTMNDVVS 387
S++V I C E AD+RPT ++S
Sbjct: 247 SEKV----YTIMYSCWHEKADERPTFKILLS 273
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKGVLRKGDE-----IAVKRL-SGRSEQGLREMKNEASVIAKVQHKNLVRL 176
LG G FG VYKG+ E +A+K L S + +E+ +EA V+A V + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 177 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI----LLDWVTRVQIIEGIAQGLLYLHQ 232
LG C+ + L+ + MP L + + R+ LL+W + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYLED 137
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL 292
VR++HRDL A N+L+ + KI+DFG+AR+ +E + + +M+ E L
Sbjct: 138 ---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 194
Query: 293 EGIFSIKSDVFSFGVLLLEIVS 314
F+ +SDV+S+GV + E+++
Sbjct: 195 RRRFTHQSDVWSYGVTVWELMT 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 127/271 (46%), Gaps = 31/271 (11%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+LG G FG V G R ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ +I EYM N L +L + R + +++ + + + + YL + +H
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--LEMCKDVCEAMEYLES---KQFLH 134
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG--YMSPEYALEGIFSI 298
RDL A N L++ K+SDFG++R +E TS + + + PE + FS
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY---TSSVGSKFPVRWSPPEVLMYSKFSS 191
Query: 299 KSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDP--VLEDEYS 356
KSD+++FGVL+ EI SL + Y + +T++ T E I + +
Sbjct: 192 KSDIWAFGVLMWEIY------------SLGKMPY--ERFTNSETAEHIAQGLRLYRPHLA 237
Query: 357 SKQVLLRYVNIALLCVQESADDRPTMNDVVS 387
S++V I C E AD+RPT ++S
Sbjct: 238 SEKVY----TIMYSCWHEKADERPTFKILLS 264
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 111/196 (56%), Gaps = 19/196 (9%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCID 182
+G+G FG V G R G+++AVK + +++ + EASV+ +++H NLV+LLG ++
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 183 KDEKI-LIYEYMPNKSLDFFLFDPTKRILL-DWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + ++ EYM SL +L + +L D + + + + + + YL + +H
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEYLEGNN---FVH 131
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGT--YGYMSPEYALEGIFSI 298
RDL A N+L+ +D K+SDFG+ + +A++++ G + +PE E FS
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREAAFST 184
Query: 299 KSDVFSFGVLLLEIVS 314
KSDV+SFG+LL EI S
Sbjct: 185 KSDVWSFGILLWEIYS 200
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 27/269 (10%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+LG G FG V G R ++A+K + S E EA V+ + H+ LV+L G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ +I EYM N L +L + R + +++ + + + + YL + +H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--LEMCKDVCEAMEYLES---KQFLH 128
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RDL A N L++ K+SDFG++R +E ++ + PE + FS KS
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV-RWSPPEVLMYSKFSSKS 187
Query: 301 DVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELIDDP--VLEDEYSSK 358
D+++FGVL+ EI SL + Y + +T++ T E I + +S+
Sbjct: 188 DIWAFGVLMWEIY------------SLGKMPY--ERFTNSETAEHIAQGLRLYRPHLASE 233
Query: 359 QVLLRYVNIALLCVQESADDRPTMNDVVS 387
+V I C E AD+RPT ++S
Sbjct: 234 KV----YTIMYSCWHEKADERPTFKILLS 258
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 7/196 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGDE-IAVKRLSGRSEQGLR-EMKNEASVIAKVQHKNLVRLLG 178
++G G FG V+ G LR + +AVK L+ + EA ++ + H N+VRL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
C K ++ E + + DF F T+ L T +Q++ A G+ YL
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSI 298
IHRDL A N L+ + KISDFGM+R A+ + +PE G +S
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 299 KSDVFSFGVLLLEIVS 314
+SDV+SFG+LL E S
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 7/196 (3%)
Query: 121 NKLGEGGFGPVYKGVLRKGDE-IAVKRLSGRSEQGLR-EMKNEASVIAKVQHKNLVRLLG 178
++G G FG V+ G LR + +AVK L+ + EA ++ + H N+VRL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
C K ++ E + + DF F T+ L T +Q++ A G+ YL
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSI 298
IHRDL A N L+ + KISDFGM+R A+ + +PE G +S
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 299 KSDVFSFGVLLLEIVS 314
+SDV+SFG+LL E S
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 153/333 (45%), Gaps = 53/333 (15%)
Query: 73 LNLKANNVNIEL-PLNSKLIERSKKKEVDQLPLFSFSSVSTATNTFSDTNKLGEGGFGPV 131
L++ +N V+I+L LN +L++ + + S+ F++ +G G FG V
Sbjct: 3 LHMGSNTVHIDLSALNPELVQAVQHVVIGP---------SSLIVHFNEV--IGRGHFGCV 51
Query: 132 YKGVLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLLGCCI-DKDE 185
Y G L D AVK L+ ++ G + + E ++ H N++ LLG C+ +
Sbjct: 52 YHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 111
Query: 186 KILIYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHR 241
+++ YM + L F+ +PT + L+ + +V A+G+ +L + + +HR
Sbjct: 112 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL---ASKKFVHR 162
Query: 242 DLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYALEGIFSIK 299
DL A N +LD+ K++DFG+AR E + N + +M+ E F+ K
Sbjct: 163 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 222
Query: 300 SDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDDPVLEDEYSS 357
SDV+SFGVLL E+++ G +N L R L E DP+ E
Sbjct: 223 SDVWSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE----- 273
Query: 358 KQVLLRYVNIALLCVQESADDRPTMNDVVSMLT 390
+ L C A+ RP+ +++VS ++
Sbjct: 274 ---------VMLKCWHPKAEMRPSFSELVSRIS 297
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 123 LGEGGFGPVYKGVLRKGD---EIAVKRLSG-RSEQGLREMKNEASVIAKV-QHKNLVRLL 177
+GEG FG V K ++K + A+KR+ S+ R+ E V+ K+ H N++ LL
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFL-------FDPTKRIL------LDWVTRVQIIEGIA 224
G C + L EY P+ +L FL DP I L + +A
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG 284
+G+ YL S+ + IHRDL A NIL+ ++ KI+DFG++R G E+ +
Sbjct: 143 RGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVR 196
Query: 285 YMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+ E +++ SDV+S+GVLL EIVS
Sbjct: 197 WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 123 LGEGGFGPVYKGVLRKGD---EIAVKRLSG-RSEQGLREMKNEASVIAKV-QHKNLVRLL 177
+GEG FG V K ++K + A+KR+ S+ R+ E V+ K+ H N++ LL
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFL-------FDPTKRIL------LDWVTRVQIIEGIA 224
G C + L EY P+ +L FL DP I L + +A
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG 284
+G+ YL S+ + IHRDL A NIL+ ++ KI+DFG++R G E+ +
Sbjct: 153 RGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVR 206
Query: 285 YMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+ E +++ SDV+S+GVLL EIVS
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 123 LGEGGFGPVYKGVLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLL 177
+G G FG VY G L D AVK L+ ++ G + + E ++ H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 178 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
G C+ + +++ YM + L F+ +PT + L+ + +V A+G+ YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 148
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEY 290
+ + +HRDL A N +LD+ K++DFG+AR E + N + +M+ E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDD 348
F+ KSDV+SFGVLL E+++ G +N L R L E D
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 263
Query: 349 PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLT 390
P+ E + L C A+ RP+ +++VS ++
Sbjct: 264 PLYE--------------VMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 123 LGEGGFGPVYKGVLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLL 177
+G G FG VY G L D AVK L+ ++ G + + E ++ H N++ LL
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 178 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
G C+ + +++ YM + L F+ +PT + L+ + +V A+G+ YL
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 168
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEY 290
+ + +HRDL A N +LD+ K++DFG+AR E + N + +M+ E
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDD 348
F+ KSDV+SFGVLL E+++ G +N L R L E D
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 283
Query: 349 PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLT 390
P+ E + L C A+ RP+ +++VS ++
Sbjct: 284 PLYE--------------VMLKCWHPKAEMRPSFSELVSRIS 311
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 111/196 (56%), Gaps = 19/196 (9%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCID 182
+G+G FG V G R G+++AVK + +++ + EASV+ +++H NLV+LLG ++
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 183 KDEKI-LIYEYMPNKSLDFFLFDPTKRILL-DWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + ++ EYM SL +L + +L D + + + + + + YL + +H
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEYLEGNN---FVH 125
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGT--YGYMSPEYALEGIFSI 298
RDL A N+L+ +D K+SDFG+ + +A++++ G + +PE E FS
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFST 178
Query: 299 KSDVFSFGVLLLEIVS 314
KSDV+SFG+LL EI S
Sbjct: 179 KSDVWSFGILLWEIYS 194
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 123 LGEGGFGPVYKGVLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLL 177
+G G FG VY G L D AVK L+ ++ G + + E ++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 178 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
G C+ + +++ YM + L F+ +PT + L+ + +V A+G+ YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 149
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEY 290
+ + +HRDL A N +LD+ K++DFG+AR E + N + +M+ E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDD 348
F+ KSDV+SFGVLL E+++ G +N L R L E D
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 264
Query: 349 PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLT 390
P+ E + L C A+ RP+ +++VS ++
Sbjct: 265 PLYE--------------VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 111/196 (56%), Gaps = 19/196 (9%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCID 182
+G+G FG V G R G+++AVK + +++ + EASV+ +++H NLV+LLG ++
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 183 KDEKI-LIYEYMPNKSLDFFLFDPTKRILL-DWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + ++ EYM SL +L + +L D + + + + + + YL + +H
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEYLEGNN---FVH 140
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGT--YGYMSPEYALEGIFSI 298
RDL A N+L+ +D K+SDFG+ + +A++++ G + +PE E FS
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFST 193
Query: 299 KSDVFSFGVLLLEIVS 314
KSDV+SFG+LL EI S
Sbjct: 194 KSDVWSFGILLWEIYS 209
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 123 LGEGGFGPVYKGVLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLL 177
+G G FG VY G L D AVK L+ ++ G + + E ++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 178 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
G C+ + +++ YM + L F+ +PT + L+ + +V A+G+ YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 149
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEY 290
+ + +HRDL A N +LD+ K++DFG+AR E + N + +M+ E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDD 348
F+ KSDV+SFGVLL E+++ G +N L R L E D
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 264
Query: 349 PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLT 390
P+ E + L C A+ RP+ +++VS ++
Sbjct: 265 PLYE--------------VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 111/196 (56%), Gaps = 19/196 (9%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCID 182
+G+G FG V G R G+++AVK + +++ + EASV+ +++H NLV+LLG ++
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 183 KDEKI-LIYEYMPNKSLDFFLFDPTKRILL-DWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + ++ EYM SL +L + +L D + + + + + + YL + +H
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEYLEGNN---FVH 312
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGT--YGYMSPEYALEGIFSI 298
RDL A N+L+ +D K+SDFG+ + +A++++ G + +PE E FS
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALREKKFST 365
Query: 299 KSDVFSFGVLLLEIVS 314
KSDV+SFG+LL EI S
Sbjct: 366 KSDVWSFGILLWEIYS 381
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 108/203 (53%), Gaps = 13/203 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEI-AVKRLS-GRSEQGLREMKNEASVIAKVQHKNLV 174
F+ +++G+G FG VYKG+ E+ A+K + +E + +++ E +V+++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 175 RLLGCCIDKDEKILIYEYMPNKS-LDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
R G + + +I EY+ S LD P + + I+ I +GL YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYI-----ATILREILKGLDYLHS- 134
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
R IHRD+KA+N+LL + + K++DFG+A +++ N VGT +M+PE +
Sbjct: 135 --ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQ 190
Query: 294 GIFSIKSDVFSFGVLLLEIVSGK 316
+ K+D++S G+ +E+ G+
Sbjct: 191 SAYDFKADIWSLGITAIELAKGE 213
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAV-KRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
LG+G FG K R+ E+ V K L E+ R E V+ ++H N+++ +G +
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV-L 76
Query: 182 DKDEKI-LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
KD+++ I EY+ +L + + W RV + IA G+ YLH + IIH
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQ--YPWSQRVSFAKDIASGMAYLHS---MNIIH 131
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR------------IVGTYGYMSP 288
RDL + N L+ ++ N ++DFG+AR+ + Q R +VG +M+P
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVS 314
E + K DVFSFG++L EI+
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEIIG 217
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 123 LGEGGFGPVYKGVLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLL 177
+G G FG VY G L D AVK L+ ++ G + + E ++ H N++ LL
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 178 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
G C+ + +++ YM + L F+ +PT + L+ + +V A+G+ YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 148
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEY 290
+ + +HRDL A N +LD+ K++DFG+AR E + N + +M+ E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDD 348
F+ KSDV+SFGVLL E+++ G +N L R L E D
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 263
Query: 349 PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLT 390
P+ E + L C A+ RP+ +++VS ++
Sbjct: 264 PLYE--------------VMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 123 LGEGGFGPVYKGVLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLL 177
+G G FG VY G L D AVK L+ ++ G + + E ++ H N++ LL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 178 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
G C+ + +++ YM + L F+ +PT + L+ + +V A+G+ YL
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 141
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEY 290
+ + +HRDL A N +LD+ K++DFG+AR E + N + +M+ E
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDD 348
F+ KSDV+SFGVLL E+++ G +N L R L E D
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 256
Query: 349 PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLT 390
P+ E + L C A+ RP+ +++VS ++
Sbjct: 257 PLYE--------------VMLKCWHPKAEMRPSFSELVSRIS 284
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 123 LGEGGFGPVYKGVLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLL 177
+G G FG VY G L D AVK L+ ++ G + + E ++ H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 178 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
G C+ + +++ YM + L F+ +PT + L+ + +V A+G+ YL
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 147
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEY 290
+ + +HRDL A N +LD+ K++DFG+AR E + N + +M+ E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDD 348
F+ KSDV+SFGVLL E+++ G +N L R L E D
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 262
Query: 349 PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLT 390
P+ E + L C A+ RP+ +++VS ++
Sbjct: 263 PLYE--------------VMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 123 LGEGGFGPVYKGVLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLL 177
+G G FG VY G L D AVK L+ ++ G + + E ++ H N++ LL
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 178 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
G C+ + +++ YM + L F+ +PT + L+ + +V A+G+ YL
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 144
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEY 290
+ + +HRDL A N +LD+ K++DFG+AR E + N + +M+ E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDD 348
F+ KSDV+SFGVLL E+++ G +N L R L E D
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 259
Query: 349 PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLT 390
P+ E + L C A+ RP+ +++VS ++
Sbjct: 260 PLYE--------------VMLKCWHPKAEMRPSFSELVSRIS 287
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 123 LGEGGFGPVYKGVLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLL 177
+G G FG VY G L D AVK L+ ++ G + + E ++ H N++ LL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 178 GCCI-DKDEKILIYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
G C+ + +++ YM + L F+ +PT + L+ + +V A+G+ YL
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 167
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEY 290
+ + +HRDL A N +LD+ K++DFG+AR E + N + +M+ E
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDD 348
F+ KSDV+SFGVLL E+++ G +N L R L E D
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 282
Query: 349 PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLT 390
P+ E + L C A+ RP+ +++VS ++
Sbjct: 283 PLYE--------------VMLKCWHPKAEMRPSFSELVSRIS 310
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 123 LGEGGFGPVYKGVLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLL 177
+G G FG VY G L D AVK L+ ++ G + + E ++ H N++ LL
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 178 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
G C+ + +++ YM + L F+ +PT + L+ + +V A+G+ YL
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 146
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEY 290
+ + +HRDL A N +LD+ K++DFG+AR E + N + +M+ E
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDD 348
F+ KSDV+SFGVLL E+++ G +N L R L E D
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 261
Query: 349 PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLT 390
P+ E + L C A+ RP+ +++VS ++
Sbjct: 262 PLYE--------------VMLKCWHPKAEMRPSFSELVSRIS 289
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 149/330 (45%), Gaps = 55/330 (16%)
Query: 77 ANNVNIEL-PLNSKLIERSKKKEVDQLPLF-SFSSVSTATNTFSDTNKLGEGGFGPVYKG 134
AN V+I+L LN +L++ + + L F+ V +G G FG VY G
Sbjct: 2 ANTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEV------------IGRGHFGCVYHG 49
Query: 135 VLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLLGCCIDKD-EKIL 188
L D AVK L+ ++ G + + E ++ H N++ LLG C+ + ++
Sbjct: 50 TLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 109
Query: 189 IYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLK 244
+ YM + L F+ +PT + L+ + +V A+G+ +L + + +HRDL
Sbjct: 110 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL---ASKKFVHRDLA 160
Query: 245 ASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYALEGIFSIKSDV 302
A N +LD+ K++DFG+AR E + N + +M+ E F+ KSDV
Sbjct: 161 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 220
Query: 303 FSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDDPVLEDEYSSKQV 360
+SFGVLL E+++ G +N L R L E DP+ E
Sbjct: 221 WSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 268
Query: 361 LLRYVNIALLCVQESADDRPTMNDVVSMLT 390
+ L C A+ RP+ +++VS ++
Sbjct: 269 ------VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 104
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
C D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 105 CFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 156
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 157 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 214 KSACKSSDLWALGCIIYQLVAG 235
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 123 LGEGGFGPVYKGVLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLL 177
+G G FG VY G L D AVK L+ ++ G + + E ++ H N++ LL
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 178 GCCIDKD-EKILIYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
G C+ + +++ YM + L F+ +PT + L+ + +V A+G+ +L
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 147
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEY 290
+ + +HRDL A N +LD+ K++DFG+AR E + N + +M+ E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDD 348
F+ KSDV+SFGVLL E+++ G +N L R L E D
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 262
Query: 349 PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLT 390
P+ E + L C A+ RP+ +++VS ++
Sbjct: 263 PLYE--------------VMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 149/330 (45%), Gaps = 55/330 (16%)
Query: 77 ANNVNIEL-PLNSKLIERSKKKEVDQLPLF-SFSSVSTATNTFSDTNKLGEGGFGPVYKG 134
AN V+I+L LN +L++ + + L F+ V +G G FG VY G
Sbjct: 61 ANTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEV------------IGRGHFGCVYHG 108
Query: 135 VLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLLGCCI-DKDEKIL 188
L D AVK L+ ++ G + + E ++ H N++ LLG C+ + ++
Sbjct: 109 TLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168
Query: 189 IYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLK 244
+ YM + L F+ +PT + L+ + +V A+G+ +L + + +HRDL
Sbjct: 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL---ASKKFVHRDLA 219
Query: 245 ASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYALEGIFSIKSDV 302
A N +LD+ K++DFG+AR E + N + +M+ E F+ KSDV
Sbjct: 220 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 279
Query: 303 FSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDDPVLEDEYSSKQV 360
+SFGVLL E+++ G +N L R L E DP+ E
Sbjct: 280 WSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYE-------- 327
Query: 361 LLRYVNIALLCVQESADDRPTMNDVVSMLT 390
+ L C A+ RP+ +++VS ++
Sbjct: 328 ------VMLKCWHPKAEMRPSFSELVSRIS 351
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRL-SGRSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K + ++AVK L S +E+ L ++ +E ++ + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTR--VQI 219
++ LLG C +I EY +L +L F+P+ ++ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
+A+G+ YL + + IHRDL A N+L+ +D KI+DFG+AR + T+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 280 VGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + I++ +SDV+SFGVLL EI +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 123 LGEGGFGPVYKGVLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLL 177
+G G FG VY G L D AVK L+ ++ G + + E ++ H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 178 GCCI-DKDEKILIYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
G C+ + +++ YM + L F+ +PT + L+ + +V A+G+ +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 150
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEY 290
+ + +HRDL A N +LD+ K++DFG+AR E + N + +M+ E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDD 348
F+ KSDV+SFGVLL E+++ G +N L R L E D
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 265
Query: 349 PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLT 390
P+ E + L C A+ RP+ +++VS ++
Sbjct: 266 PLYE--------------VMLKCWHPKAEMRPSFSELVSRIS 293
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 123 LGEGGFGPVYKGVLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLL 177
+G G FG VY G L D AVK L+ ++ G + + E ++ H N++ LL
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 178 GCCI-DKDEKILIYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
G C+ + +++ YM + L F+ +PT + L+ + +V A+G+ +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 149
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEY 290
+ + +HRDL A N +LD+ K++DFG+AR E + N + +M+ E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDD 348
F+ KSDV+SFGVLL E+++ G +N L R L E D
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 264
Query: 349 PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLT 390
P+ E + L C A+ RP+ +++VS ++
Sbjct: 265 PLYE--------------VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 117/221 (52%), Gaps = 25/221 (11%)
Query: 111 STATNTFSDTNKLGEGGFGPVYKGVLRKGDE-IAVKRL-----SGRSE--QGLREMKNEA 162
+ A N ++G+GGFG V+KG L K +A+K L G +E + +E + E
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 163 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG 222
+++ + H N+V+L G + ++ E++P L L D I W +++++
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI--KWSVKLRLMLD 130
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDK-DMN----PKISDFGMARICGGNELQANTS 277
IA G+ Y+ Q I+HRDL++ NI L D N K++DFG+++ + + S
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVS 184
Query: 278 RIVGTYGYMSPEY--ALEGIFSIKSDVFSFGVLLLEIVSGK 316
++G + +M+PE A E ++ K+D +SF ++L I++G+
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 130/282 (46%), Gaps = 41/282 (14%)
Query: 123 LGEGGFGPVYKGVLRKGD----EIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLL 177
+G G FG VY G L D AVK L+ ++ G + + E ++ H N++ LL
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 178 GCCI-DKDEKILIYEYMPNKSLDFFL----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
G C+ + +++ YM + L F+ +PT + L+ + +V A+G+ +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 150
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEY 290
+ + +HRDL A N +LD+ K++DFG+AR E + N + +M+ E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDD 348
F+ KSDV+SFGVLL E+++ G +N L R L E D
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT----RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD 265
Query: 349 PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLT 390
P+ E + L C A+ RP+ +++VS ++
Sbjct: 266 PLYE--------------VMLKCWHPKAEMRPSFSELVSRIS 293
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 123 LGEGGFGPVYKGVLRKGD---EIAVKRLSG-RSEQGLREMKNEASVIAKV-QHKNLVRLL 177
+GEG FG V K ++K + A+KR+ S+ R+ E V+ K+ H N++ LL
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFL-------FDPTKRIL------LDWVTRVQIIEGIA 224
G C + L EY P+ +L FL DP I L + +A
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG 284
+G+ YL S+ + IHR+L A NIL+ ++ KI+DFG++R G E+ +
Sbjct: 150 RGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVR 203
Query: 285 YMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+ E +++ SDV+S+GVLL EIVS
Sbjct: 204 WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 12/210 (5%)
Query: 109 SVSTATNTFSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKNEASVIAK 167
SV ++ K+G+G G VY + + G E+A+++++ + + + NE V+ +
Sbjct: 15 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 168 VQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGL 227
++ N+V L + DE ++ EY+ SL D +D + Q L
Sbjct: 75 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQAL 130
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGM-ARICGGNELQANTSRIVGTYGYM 286
+LH ++IHR++K+ NILL D + K++DFG A+I Q+ S +VGT +M
Sbjct: 131 EFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE---QSKRSTMVGTPYWM 184
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+PE + K D++S G++ +E++ G+
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 35/273 (12%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+LG G FG V G + ++AVK + S E EA + K+ H LV+ G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ ++ EY+ N L +L K L+ +++ + +G+ +L + + IH
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLESH---QFIH 127
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGT---YGYMSPEYALEGIFS 297
RDL A N L+D+D+ K+SDFGM R ++ ++ VGT + +PE +S
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS----VGTKFPVKWSAPEVFHYFKYS 183
Query: 298 IKSDVFSFGVLLLEIVS-GKKNTGLYRTDSLNLLGYVWDLWTSNRTL--ELIDDPVLEDE 354
KSDV++FG+L+ E+ S GK LY + L + +R L D + +
Sbjct: 184 SKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL-----KVSQGHRLYRPHLASDTIYQIM 238
Query: 355 YSSKQVLLRYVNIALLCVQESADDRPTMNDVVS 387
YS C E + RPT ++S
Sbjct: 239 YS--------------CWHELPEKRPTFQQLLS 257
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 36/217 (16%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLG-- 178
+G G +G VYKG L DE +AVK S + Q KN V ++H N+ R +
Sbjct: 21 IGRGRYGAVYKGSL---DERPVAVKVFSFANRQNFINEKNIYRV-PLMEHDNIARFIVGD 76
Query: 179 ---CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLH---- 231
+ E +L+ EY PN SL +L T DWV+ ++ + +GL YLH
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHTELP 132
Query: 232 --QYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNEL----QANTSRI--VGTY 283
+ + I HRDL + N+L+ D ISDFG++ GN L + + + I VGT
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTI 192
Query: 284 GYMSPEYALEGIFSIKS--------DVFSFGVLLLEI 312
YM+PE LEG +++ D+++ G++ EI
Sbjct: 193 RYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRL-SGRSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K + ++AVK L S +E+ L ++ +E ++ + +HKN
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTR--VQI 219
++ LLG C +I EY +L +L ++P+ ++ V
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
+A+G+ YL + + IHRDL A N+L+ +D KI+DFG+AR + T+
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 280 VGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + I++ +SDV+SFGVLL EI +
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 116/221 (52%), Gaps = 25/221 (11%)
Query: 111 STATNTFSDTNKLGEGGFGPVYKGVLRKGDE-IAVKRL-----SGRSE--QGLREMKNEA 162
+ A N ++G+GGFG V+KG L K +A+K L G +E + +E + E
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 163 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG 222
+++ + H N+V+L G + ++ E++P L L D I W +++++
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI--KWSVKLRLMLD 130
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDK-DMN----PKISDFGMARICGGNELQANTS 277
IA G+ Y+ Q I+HRDL++ NI L D N K++DFG ++ + + S
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVS 184
Query: 278 RIVGTYGYMSPEY--ALEGIFSIKSDVFSFGVLLLEIVSGK 316
++G + +M+PE A E ++ K+D +SF ++L I++G+
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRL-SGRSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K + ++AVK L S +E+ L ++ +E ++ + +HKN
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTR--VQI 219
++ LLG C +I EY +L +L ++P+ ++ V
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
+A+G+ YL + + IHRDL A N+L+ +D KI+DFG+AR + T+
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 280 VGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + I++ +SDV+SFGVLL EI +
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 106/199 (53%), Gaps = 13/199 (6%)
Query: 122 KLGEGGFGPVYKGVLR---KGDEIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLL 177
+LG G FG V +GV R K ++A+K L +E+ EM EA ++ ++ + +VRL+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G C + +L+ E L FL + I + V +++ ++ G+ YL + +
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVA--ELLHQVSMGMKYLEEKN--- 130
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTY--GYMSPEYALEGI 295
+HRDL A N+LL KISDFG+++ G ++ T+R G + + +PE
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSAGKWPLKWYAPECINFRK 189
Query: 296 FSIKSDVFSFGVLLLEIVS 314
FS +SDV+S+GV + E +S
Sbjct: 190 FSSRSDVWSYGVTMWEALS 208
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRL-SGRSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K + ++AVK L S +E+ L ++ +E ++ + +HKN
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTR--VQI 219
++ LLG C +I EY +L +L ++P+ ++ V
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
+A+G+ YL + + IHRDL A N+L+ +D KI+DFG+AR + T+
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 280 VGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + I++ +SDV+SFGVLL EI +
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRL-SGRSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K + ++AVK L S +E+ L ++ +E ++ + +HKN
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTR--VQI 219
++ LLG C +I EY +L +L ++P+ ++ V
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
+A+G+ YL + + IHRDL A N+L+ +D KI+DFG+AR + T+
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 280 VGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + I++ +SDV+SFGVLL EI +
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRL-SGRSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K + ++AVK L S +E+ L ++ +E ++ + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTR--VQI 219
++ LLG C +I EY +L +L ++P+ ++ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
+A+G+ YL + + IHRDL A N+L+ +D KI+DFG+AR + T+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 280 VGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + I++ +SDV+SFGVLL EI +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRL-SGRSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K + ++AVK L S +E+ L ++ +E ++ + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTR--VQI 219
++ LLG C +I EY +L +L ++P+ ++ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
+A+G+ YL + + IHRDL A N+L+ +D KI+DFG+AR + T+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 280 VGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + I++ +SDV+SFGVLL EI +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRL-SGRSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K + ++AVK L S +E+ L ++ +E ++ + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTR--VQI 219
++ LLG C +I EY +L +L ++P+ ++ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
+A+G+ YL + + IHRDL A N+L+ +D KI+DFG+AR + T+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 280 VGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + I++ +SDV+SFGVLL EI +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 112/203 (55%), Gaps = 11/203 (5%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE-QGLREMK-NEASVIAKVQHKNLV 174
+ K+GEG +G VYK +G +A+KR+ +E +G+ E S++ ++ H N+V
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYS 234
L+ + L++E+M K L L D K L D ++ + + + +G+ + HQ+
Sbjct: 83 SLIDVIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQH- 138
Query: 235 RVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL-E 293
RI+HRDLK N+L++ D K++DFG+AR G +++ T +V T Y +P+ +
Sbjct: 139 --RILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPVRSYTHEVV-TLWYRAPDVLMGS 194
Query: 294 GIFSIKSDVFSFGVLLLEIVSGK 316
+S D++S G + E+++GK
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRL-SGRSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K + ++AVK L S +E+ L ++ +E ++ + +HKN
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTR--VQI 219
++ LLG C +I EY +L +L ++P+ ++ V
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
+A+G+ YL + + IHRDL A N+L+ +D KI+DFG+AR + T+
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 280 VGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + I++ +SDV+SFGVLL EI +
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 112/203 (55%), Gaps = 11/203 (5%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE-QGLREMK-NEASVIAKVQHKNLV 174
+ K+GEG +G VYK +G +A+KR+ +E +G+ E S++ ++ H N+V
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYS 234
L+ + L++E+M K L L D K L D ++ + + + +G+ + HQ+
Sbjct: 83 SLIDVIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQH- 138
Query: 235 RVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL-E 293
RI+HRDLK N+L++ D K++DFG+AR G +++ T +V T Y +P+ +
Sbjct: 139 --RILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPVRSYTHEVV-TLWYRAPDVLMGS 194
Query: 294 GIFSIKSDVFSFGVLLLEIVSGK 316
+S D++S G + E+++GK
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 100 TFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 151
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
S SD+++ G ++ ++V+G
Sbjct: 209 KSASKSSDLWALGCIIYQLVAG 230
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 108/203 (53%), Gaps = 13/203 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEI-AVKRLS-GRSEQGLREMKNEASVIAKVQHKNLV 174
F+ K+G+G FG V+KG+ + ++ A+K + +E + +++ E +V+++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 175 RLLGCCIDKDEKILIYEYMPNKS-LDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
+ G + + +I EY+ S LD P LD I+ I +GL YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLHSE 123
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
+ IHRD+KA+N+LL + K++DFG+A +++ NT VGT +M+PE +
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQ 178
Query: 294 GIFSIKSDVFSFGVLLLEIVSGK 316
+ K+D++S G+ +E+ G+
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 116/221 (52%), Gaps = 25/221 (11%)
Query: 111 STATNTFSDTNKLGEGGFGPVYKGVLRKGDE-IAVKRL-----SGRSE--QGLREMKNEA 162
+ A N ++G+GGFG V+KG L K +A+K L G +E + +E + E
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 163 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG 222
+++ + H N+V+L G + ++ E++P L L D I W +++++
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI--KWSVKLRLMLD 130
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDK-DMN----PKISDFGMARICGGNELQANTS 277
IA G+ Y+ Q I+HRDL++ NI L D N K++DF +++ + + S
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVS 184
Query: 278 RIVGTYGYMSPEY--ALEGIFSIKSDVFSFGVLLLEIVSGK 316
++G + +M+PE A E ++ K+D +SF ++L I++G+
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 108/203 (53%), Gaps = 13/203 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEI-AVKRLS-GRSEQGLREMKNEASVIAKVQHKNLV 174
F+ K+G+G FG V+KG+ + ++ A+K + +E + +++ E +V+++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 175 RLLGCCIDKDEKILIYEYMPNKS-LDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
+ G + + +I EY+ S LD P LD I+ I +GL YLH
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLHSE 143
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
+ IHRD+KA+N+LL + K++DFG+A +++ NT VGT +M+PE +
Sbjct: 144 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQ 198
Query: 294 GIFSIKSDVFSFGVLLLEIVSGK 316
+ K+D++S G+ +E+ G+
Sbjct: 199 SAYDSKADIWSLGITAIELARGE 221
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 113/212 (53%), Gaps = 13/212 (6%)
Query: 108 SSVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEI-AVKRLS-GRSEQGLREMKNEASVI 165
++++ F+ ++G+G FG V+KG+ + ++ A+K + +E + +++ E +V+
Sbjct: 16 NNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVL 75
Query: 166 AKVQHKNLVRLLGCCIDKDEKILIYEYMPNKS-LDFFLFDPTKRILLDWVTRVQIIEGIA 224
++ + + G + + +I EY+ S LD P D +++ I
Sbjct: 76 SQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP-----FDEFQIATMLKEIL 130
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG 284
+GL YLH + IHRD+KA+N+LL + + K++DFG+A +++ NT VGT
Sbjct: 131 KGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPF 185
Query: 285 YMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+M+PE + + K+D++S G+ +E+ G+
Sbjct: 186 WMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 74
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 75 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 126
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 127 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 184 KSACKSSDLWALGCIIYQLVAG 205
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 77
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 78 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 129
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 130 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 187 KSACKSSDLWALGCIIYQLVAG 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 76
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 77 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 128
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 129 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 186 KSACKSSDLWALGCIIYQLVAG 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 75
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 76 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 127
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 128 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 185 KSACKSSDLWALGCIIYQLVAG 206
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 109/210 (51%), Gaps = 25/210 (11%)
Query: 123 LGEGGFGPVYKGVLRKGD----EIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNLVRL 176
LGEG FG V +G L++ D ++AVK +L S++ + E +EA+ + H N++RL
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 177 LGCCIDKDEK-----ILIYEYMPNKSLDFFLF-----DPTKRILLDWVTRVQIIEGIAQG 226
LG CI+ + ++I +M L +L K I L T ++ + IA G
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQ--TLLKFMVDIALG 159
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR--ICGGNELQANTSRIVGTYG 284
+ YL S +HRDL A N +L DM ++DFG+++ G Q +++
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKM--PVK 214
Query: 285 YMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+++ E + +++ KSDV++FGV + EI +
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 81
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 82 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 133
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 134 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 191 KSACKSSDLWALGCIIYQLVAG 212
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 122 KLGEGGFGPVYKGVLR---KGDEIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLL 177
+LG G FG V +GV R K ++A+K L +E+ EM EA ++ ++ + +VRL+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G C + +L+ E L FL + I + V +++ ++ G+ YL + +
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV--AELLHQVSMGMKYLEEKN--- 456
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTY--GYMSPEYALEGI 295
+HR+L A N+LL KISDFG+++ G ++ T+R G + + +PE
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSAGKWPLKWYAPECINFRK 515
Query: 296 FSIKSDVFSFGVLLLEIVS-GKK 317
FS +SDV+S+GV + E +S G+K
Sbjct: 516 FSSRSDVWSYGVTMWEALSYGQK 538
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 149
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 207 KSACKSSDLWALGCIIYQLVAG 228
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 148
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 149 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 206 KSACKSSDLWALGCIIYQLVAG 227
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
K+GEG G V + G ++AVK + R +Q + NE ++ QH N+V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ +E ++ E++ +L D ++ L+ + E + Q L YLH +IH
Sbjct: 112 LVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIH 164
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K+ +ILL D K+SDFG + +VGT +M+PE +++ +
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 301 DVFSFGVLLLEIVSGK 316
D++S G++++E+V G+
Sbjct: 223 DIWSLGIMVIEMVDGE 238
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 149
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 207 KSACKSSDLWALGCIIYQLVAG 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 152
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 153 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 210 KSACKSSDLWALGCIIYQLVAG 231
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 136/304 (44%), Gaps = 47/304 (15%)
Query: 115 NTFSDTNKLGEGGFGPVYKGV---LRKGD---EIAVKRLSGRSEQGLRE-MKNEASVIAK 167
N LG G FG V + L K D ++AVK L + +E + +E +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 168 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVT 215
+ QH+N+V LLG C ++I EY L FL ++P+ +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 216 R--VQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR--ICGGNE 271
R + +AQG+ +L + IHRD+ A N+LL KI DFG+AR + N
Sbjct: 166 RDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 272 LQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLG 331
+ +R+ +M+PE + +++++SDV+S+G+LL EI SL L
Sbjct: 223 IVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------------SLGLNP 268
Query: 332 YVWDLWTSNRTLELIDD--PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
Y + +++ +L+ D + + ++ K + +I C RPT + S L
Sbjct: 269 YP-GILVNSKFYKLVKDGYQMAQPAFAPKNIY----SIMQACWALEPTHRPTFQQICSFL 323
Query: 390 TNEA 393
+A
Sbjct: 324 QEQA 327
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 151
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 209 KSACKSSDLWALGCIIYQLVAG 230
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 148
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 149 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 206 KSACKSSDLWALGCIIYQLVAG 227
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 133/298 (44%), Gaps = 41/298 (13%)
Query: 115 NTFSDTNKLGEGGFGPVYKGV---LRKGD---EIAVKRLSGRSEQGLRE-MKNEASVIAK 167
N LG G FG V + L K D ++AVK L + +E + +E +++
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 168 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-------FDPTKRILLDWVTRVQI 219
+ QH+N+V LLG C ++I EY L FL D L+ +
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR--ICGGNELQANTS 277
+AQG+ +L + IHRD+ A N+LL KI DFG+AR + N + +
Sbjct: 158 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 278 RIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLW 337
R+ +M+PE + +++++SDV+S+G+LL EI SL L Y +
Sbjct: 215 RL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------------SLGLNPYP-GIL 259
Query: 338 TSNRTLELIDD--PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEA 393
+++ +L+ D + + ++ K + +I C RPT + S L +A
Sbjct: 260 VNSKFYKLVKDGYQMAQPAFAPKNIY----SIMQACWALEPTHRPTFQQICSFLQEQA 313
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 152
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 153 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 210 KSACKSSDLWALGCIIYQLVAG 231
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 33/229 (14%)
Query: 115 NTFSDTNKLGEGGFGPVYK----GVL--RKGDEIAVKRLSGRSEQGLR-EMKNEASVIAK 167
N +GEG FG V++ G+L +AVK L + ++ + + EA+++A+
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 168 VQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILL-----DWVTRVQ---- 218
+ N+V+LLG C L++EYM L+ FL + + D TR +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 219 ------------IIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR- 265
I +A G+ YL S + +HRDL N L+ ++M KI+DFG++R
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 266 ICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
I + +A+ + + +M PE ++ +SDV+++GV+L EI S
Sbjct: 224 IYSADYYKADGNDAIPI-RWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 149
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 207 KSACKSSDLWALGCIIYQLVAG 228
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 45/294 (15%)
Query: 123 LGEGGFGPVYKGV---LRKGD---EIAVKRLSGRSEQGLRE-MKNEASVIAKV-QHKNLV 174
LG G FG V + L K D ++AVK L + +E + +E +++ + QH+N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFL--------FDPTKRILLDWVTRVQIIE---GI 223
LLG C ++I EY L FL DP I ++ ++ +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 224 AQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR--ICGGNELQANTSRIVG 281
AQG+ +L + IHRD+ A N+LL KI DFG+AR + N + +R+
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-- 228
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNR 341
+M+PE + +++++SDV+S+G+LL EI SL L Y + +++
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------------SLGLNPYP-GILVNSK 275
Query: 342 TLELIDD--PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEA 393
+L+ D + + ++ K + +I C RPT + S L +A
Sbjct: 276 FYKLVKDGYQMAQPAFAPKNIY----SIMQACWALEPTHRPTFQQICSFLQEQA 325
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 28/216 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRLSG-RSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K ++ +AVK L +E+ L ++ +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTRVQIIE 221
++ LLG C +I EY +L +L +D R+ + +T ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 161
Query: 222 ---GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
+A+G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + NT+
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++ +SDV+SFGVL+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 151
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 209 KSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGP-VYKGVLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 149
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 207 KSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 151
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 209 KSACKSSDLWALGCIIYQLVAG 230
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 151
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAG 230
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 134/294 (45%), Gaps = 45/294 (15%)
Query: 123 LGEGGFGPVYKGV---LRKGD---EIAVKRLSGRSEQGLRE-MKNEASVIAKV-QHKNLV 174
LG G FG V + L K D ++AVK L + +E + +E +++ + QH+N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFL--------FDPTKRILLDWVTRVQIIE---GI 223
LLG C ++I EY L FL DP I + ++ +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 224 AQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR--ICGGNELQANTSRIVG 281
AQG+ +L + IHRD+ A N+LL KI DFG+AR + N + +R+
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-- 228
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNR 341
+M+PE + +++++SDV+S+G+LL EI SL L Y + +++
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------------SLGLNPYP-GILVNSK 275
Query: 342 TLELIDD--PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEA 393
+L+ D + + ++ K + +I C RPT + S L +A
Sbjct: 276 FYKLVKDGYQMAQPAFAPKNIY----SIMQACWALEPTHRPTFQQICSFLQEQA 325
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 35/222 (15%)
Query: 123 LGEGGFGPVYK----GVLRKGD--EIAVKRLSGRSEQGLRE-MKNEASVIAKV-QHKNLV 174
LG G FG V G+ + G ++AVK L +++ RE + +E ++ ++ H+N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFL-------------FDPTKRI-------LLDWV 214
LLG C LI+EY L +L ++ KR+ +L +
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 215 TRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR--ICGGNEL 272
+ +A+G+ +L S +HRDL A N+L+ KI DFG+AR + N +
Sbjct: 173 DLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 273 QANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+R+ +M+PE EGI++IKSDV+S+G+LL EI S
Sbjct: 230 VRGNARL--PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 151
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 209 KSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 123 LGEGGFGPVYKG-VLRKGDEIAVKRLSGRS---EQGLREMKNEASVIAKVQHKNLVRLLG 178
LGEG F V L E A+K L R E + + E V++++ H V+L
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 102
Query: 179 CCIDKDEKILIYEYMPNKSLDFFL-----FDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
D ++ Y N L ++ FD T TR E I L YLH
Sbjct: 103 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------CTRFYTAE-IVSALEYLHGK 154
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
IIHRDLK NILL++DM+ +I+DFG A++ QA + VGT Y+SPE E
Sbjct: 155 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
SD+++ G ++ ++V+G
Sbjct: 212 KSACKSSDLWALGCIIYQLVAG 233
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 133/298 (44%), Gaps = 41/298 (13%)
Query: 115 NTFSDTNKLGEGGFGPVYKGV---LRKGD---EIAVKRLSGRSEQGLRE-MKNEASVIAK 167
N LG G FG V + L K D ++AVK L + +E + +E +++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 168 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFL-------FDPTKRILLDWVTRVQI 219
+ QH+N+V LLG C ++I EY L FL D L+ +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR--ICGGNELQANTS 277
+AQG+ +L + IHRD+ A N+LL KI DFG+AR + N + +
Sbjct: 166 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 278 RIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLW 337
R+ +M+PE + +++++SDV+S+G+LL EI SL L Y +
Sbjct: 223 RL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF------------SLGLNPYP-GIL 267
Query: 338 TSNRTLELIDD--PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSMLTNEA 393
+++ +L+ D + + ++ K + +I C RPT + S L +A
Sbjct: 268 VNSKFYKLVKDGYQMAQPAFAPKNIY----SIMQACWALEPTHRPTFQQICSFLQEQA 321
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 121 NKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+LG+G FG VYK ++ G A K + +SE+ L + E ++A H +V+LLG
Sbjct: 17 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQII-EGIAQGLLYLHQYSRVRI 238
+ ++ E+ P ++D + + R L + ++Q++ + + L +LH RI
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTE--PQIQVVCRQMLEALNFLHSK---RI 130
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR--IVGTYGYMSPEYAL---- 292
IHRDLKA N+L+ + + +++DFG++ L+ R +GT +M+PE +
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCETM 186
Query: 293 -EGIFSIKSDVFSFGVLLLEIVS 314
+ + K+D++S G+ L+E+
Sbjct: 187 KDTPYDYKADIWSLGITLIEMAQ 209
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAV-KRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+LG+G FG VYK ++ +A K + +SE+ L + E ++A H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQII-EGIAQGLLYLHQYSRVRII 239
++ ++ E+ ++D + + +R L + +++Q++ + L YLH +II
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLE-LERPLTE--SQIQVVCKQTLDALNYLHDN---KII 157
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL-----EG 294
HRDLKA NIL D + K++DFG++ +Q S +GT +M+PE + +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAK-NTRXIQRRDS-FIGTPYWMAPEVVMCETSKDR 215
Query: 295 IFSIKSDVFSFGVLLLEIVS 314
+ K+DV+S G+ L+E+
Sbjct: 216 PYDYKADVWSLGITLIEMAE 235
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 120/233 (51%), Gaps = 18/233 (7%)
Query: 113 ATNTF---SDTNKLGEGGFGPVYK-GVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKV 168
A N+F S T LG G FG V+K G ++A K + R + E+KNE SV+ ++
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
H NL++L K++ +L+ EY+ L + D + L + + ++ I +G+
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN--LTELDTILFMKQICEGIR 201
Query: 229 YLHQYSRVRIIHRDLKASNIL-LDKDMNP-KISDFGMARICGGNE-LQANTSRIVGTYGY 285
++HQ + I+H DLK NIL +++D KI DFG+AR E L+ N GT +
Sbjct: 202 HMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN----FGTPEF 254
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSG-KKNTGLYRTDSL-NLLGYVWDL 336
++PE S +D++S GV+ ++SG G ++L N+L WDL
Sbjct: 255 LAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDL 307
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAV-KRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+LG+G FG VYK ++ +A K + +SE+ L + E ++A H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQII-EGIAQGLLYLHQYSRVRII 239
++ ++ E+ ++D + + +R L + +++Q++ + L YLH +II
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLE-LERPLTE--SQIQVVCKQTLDALNYLHDN---KII 157
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL-----EG 294
HRDLKA NIL D + K++DFG++ +GT +M+PE + +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS--AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 295 IFSIKSDVFSFGVLLLEIV 313
+ K+DV+S G+ L+E+
Sbjct: 216 PYDYKADVWSLGITLIEMA 234
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 107/203 (52%), Gaps = 19/203 (9%)
Query: 121 NKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC 179
+LG+G FG VYK ++ G A K + +SE+ L + E ++A H +V+LLG
Sbjct: 25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQII-EGIAQGLLYLHQYSRVRI 238
+ ++ E+ P ++D + + R L + ++Q++ + + L +LH RI
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTE--PQIQVVCRQMLEALNFLHSK---RI 138
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR--IVGTYGYMSPEYAL---- 292
IHRDLKA N+L+ + + +++DFG++ L+ R +GT +M+PE +
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCETM 194
Query: 293 -EGIFSIKSDVFSFGVLLLEIVS 314
+ + K+D++S G+ L+E+
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQ 217
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 107/203 (52%), Gaps = 13/203 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEI-AVKRLS-GRSEQGLREMKNEASVIAKVQHKNLV 174
F+ K+G+G FG V+KG+ + ++ A+K + +E + +++ E +V+++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 175 RLLGCCIDKDEKILIYEYMPNKS-LDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
+ G + + +I EY+ S LD P LD I+ I +GL YLH
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLHSE 138
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
+ IHRD+KA+N+LL + K++DFG+A +++ N VGT +M+PE +
Sbjct: 139 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQ 193
Query: 294 GIFSIKSDVFSFGVLLLEIVSGK 316
+ K+D++S G+ +E+ G+
Sbjct: 194 SAYDSKADIWSLGITAIELARGE 216
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAV-KRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+LG+G FG VYK ++ +A K + +SE+ L + E ++A H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQII-EGIAQGLLYLHQYSRVRII 239
++ ++ E+ ++D + + +R L + +++Q++ + L YLH +II
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLE-LERPLTE--SQIQVVCKQTLDALNYLHDN---KII 157
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL-----EG 294
HRDLKA NIL D + K++DFG++ +GT +M+PE + +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS--AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 295 IFSIKSDVFSFGVLLLEIVS 314
+ K+DV+S G+ L+E+
Sbjct: 216 PYDYKADVWSLGITLIEMAE 235
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 107/203 (52%), Gaps = 13/203 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEI-AVKRLS-GRSEQGLREMKNEASVIAKVQHKNLV 174
F+ K+G+G FG V+KG+ + ++ A+K + +E + +++ E +V+++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 175 RLLGCCIDKDEKILIYEYMPNKS-LDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
+ G + + +I EY+ S LD P LD I+ I +GL YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLHSE 123
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
+ IHRD+KA+N+LL + K++DFG+A +++ N VGT +M+PE +
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQ 178
Query: 294 GIFSIKSDVFSFGVLLLEIVSGK 316
+ K+D++S G+ +E+ G+
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 116 TFSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSG---RSEQGLREMKNEASVIAKVQHK 171
F K+G G F VY+ L G +A+K++ + + E ++ ++ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 172 NLVRLLGCCIDKDEKILIYEYMPNKSLDFFL--FDPTKRILLD---WVTRVQIIEGIAQG 226
N+++ I+ +E ++ E L + F KR++ + W VQ+ +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE-- 150
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
H +SR R++HRD+K +N+ + K+ D G+ R A++ +VGT YM
Sbjct: 151 ----HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYM 203
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELI 346
SPE E ++ KSD++S G LL E+ + + + D +N L++ + +E
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEMAALQSP---FYGDKMN-------LYSLCKKIEQC 253
Query: 347 DDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDV 385
D P L ++ S++ L + VN +C+ + RP + V
Sbjct: 254 DYPPLPSDHYSEE-LRQLVN---MCINPDPEKRPDVTYV 288
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 136/311 (43%), Gaps = 54/311 (17%)
Query: 115 NTFSDTNKLGEGGFGPVYKGV---LRKGD---EIAVKRLSGRSEQGLRE-MKNEASVIAK 167
N LG G FG V + L K D ++AVK L + +E + +E +++
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 168 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG---- 222
+ QH+N+V LLG C ++I EY L FL + +L + Q EG
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 223 ----------------IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR- 265
+AQG+ +L + IHRD+ A N+LL KI DFG+AR
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 266 -ICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRT 324
+ N + +R+ +M+PE + +++++SDV+S+G+LL EI
Sbjct: 208 IMNDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----------- 254
Query: 325 DSLNLLGYVWDLWTSNRTLELIDD--PVLEDEYSSKQVLLRYVNIALLCVQESADDRPTM 382
SL L Y + +++ +L+ D + + ++ K + +I C RPT
Sbjct: 255 -SLGLNPYP-GILVNSKFYKLVKDGYQMAQPAFAPKNI----YSIMQACWALEPTHRPTF 308
Query: 383 NDVVSMLTNEA 393
+ S L +A
Sbjct: 309 QQICSFLQEQA 319
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRL-------SGRSEQGLREMKNEASVIAKVQHK-NLV 174
LG G FG V + D+ A R G + R + +E ++ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 175 RLLGCCIDKDEKIL-IYEYMPNKSLDFFL------FDPTKRILLDWVTRVQIIE---GIA 224
LLG C ++ I E+ +L +L F P K + D++T +I +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG 284
+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 285 YMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ DF I L + + + QGL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIK--SYLFQLLQGLAF 118
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 119 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 173
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 208
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNL 173
F K+GEG +G VYK + G+ +A+K RL +E E S++ ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V+LL +++ L++E++ F I L + + + QGL + H +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH 122
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL- 292
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE L
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLG 177
Query: 293 EGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
+S D++S G + E+V+ + L+ DS
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 208
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 15/200 (7%)
Query: 123 LGE-GGFGPVYKGVLRKGDEIAV-KRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+GE G FG VYK ++ +A K + +SE+ L + E ++A H N+V+LL
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQII-EGIAQGLLYLHQYSRVRII 239
++ ++ E+ ++D + + +R L + +++Q++ + L YLH +II
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLE-LERPLTE--SQIQVVCKQTLDALNYLHDN---KII 130
Query: 240 HRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL-----EG 294
HRDLKA NIL D + K++DFG++ +Q S +GT +M+PE + +
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDS-FIGTPYWMAPEVVMCETSKDR 189
Query: 295 IFSIKSDVFSFGVLLLEIVS 314
+ K+DV+S G+ L+E+
Sbjct: 190 PYDYKADVWSLGITLIEMAE 209
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 28/216 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRLSG-RSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K ++ +AVK L +E+ L ++ +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTRVQIIE 221
++ LLG C +I EY +L +L +D R+ + +T ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYD-INRVPEEQMTFKDLVS 161
Query: 222 ---GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
+A+G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T+
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++ +SDV+SFGVL+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 28/216 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRLSG-RSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K ++ +AVK L +E+ L ++ +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTRVQIIE 221
++ LLG C +I EY +L +L +D R+ + +T ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 161
Query: 222 ---GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
+A+G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T+
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++ +SDV+SFGVL+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 28/216 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRLSG-RSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K ++ +AVK L +E+ L ++ +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTRVQIIE 221
++ LLG C +I EY +L +L +D R+ + +T ++
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 161
Query: 222 ---GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
+A+G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T+
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++ +SDV+SFGVL+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 28/216 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRLSG-RSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K ++ +AVK L +E+ L ++ +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTRVQIIE 221
++ LLG C +I EY +L +L +D R+ + +T ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 161
Query: 222 ---GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
+A+G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T+
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++ +SDV+SFGVL+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNL 173
F K+GEG +G VYK + G+ +A+K RL +E E S++ ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V+LL +++ L++E++ F I L + + + QGL + H +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH 122
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE L
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLG 177
Query: 294 -GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
+S D++S G + E+V+ + L+ DS
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 208
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNL 173
F K+GEG +G VYK + G+ +A+K RL +E E S++ ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V+LL +++ L++E++ F I L + + + QGL + H +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH 121
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE L
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLG 176
Query: 294 -GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
+S D++S G + E+V+ + L+ DS
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 207
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNL 173
F K+GEG +G VYK + G+ +A+K RL +E E S++ ++ H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V+LL +++ L++E++ F I L + + + QGL + H +
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH 129
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL- 292
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE L
Sbjct: 130 ---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLG 184
Query: 293 EGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
+S D++S G + E+V+ + L+ DS
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 215
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNL 173
F K+GEG +G VYK + G+ +A+K RL +E E S++ ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V+LL +++ L++E++ F I L + + + QGL + H +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH 121
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE L
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLG 176
Query: 294 -GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
+S D++S G + E+V+ + L+ DS
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 207
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ F I L + + + QGL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAF 119
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPE 174
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 209
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNL 173
F K+GEG +G VYK + G+ +A+K RL +E E S++ ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V+LL +++ L++E++ F I L + + + QGL + H +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH 122
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE L
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLG 177
Query: 294 -GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
+S D++S G + E+V+ + L+ DS
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 208
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNL 173
F K+GEG +G VYK + G+ +A+K RL +E E S++ ++ H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V+LL +++ L++E++ F I L + + + QGL + H +
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH 126
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE L
Sbjct: 127 ---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLG 181
Query: 294 -GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
+S D++S G + E+V+ + L+ DS
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 212
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ DF I L + + + QGL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK--SYLFQLLQGLAF 121
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 176
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 211
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRL-------SGRSEQGLREMKNEASVIAKVQHK-NLV 174
LG G FG V + D+ A R G + R + +E ++ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 175 RLLGCCIDKDEKIL-IYEYMPNKSLDFFL------FDPTKRILLDWVTRVQIIE---GIA 224
LLG C ++ I E+ +L +L F P K + D++T +I +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG 284
+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 285 YMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 121 NKLGEGGFGPVY---KGVLRKGDEIAVKRL---SGRSEQGLREMKNEASVIAKVQHKNLV 174
+KLG GG VY +L ++A+K + E+ L+ + E +++ H+N+V
Sbjct: 17 DKLGGGGMSTVYLAEDTILNI--KVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIV 74
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYS 234
++ + D L+ EY+ +L ++ L T + I G+ + H
Sbjct: 75 SMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAHD-- 129
Query: 235 RVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEG 294
+RI+HRD+K NIL+D + KI DFG+A+ L T+ ++GT Y SPE A
Sbjct: 130 -MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL-TQTNHVLGTVQYFSPEQAKGE 187
Query: 295 IFSIKSDVFSFGVLLLEIVSGK 316
+D++S G++L E++ G+
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGE 209
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNL 173
F K+GEG +G VYK + G+ +A+K RL +E E S++ ++ H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V+LL +++ L++E++ F I L + + + QGL + H +
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH 129
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE L
Sbjct: 130 ---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLG 184
Query: 294 -GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
+S D++S G + E+V+ + L+ DS
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 215
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 28/216 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRLSG-RSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K ++ +AVK L +E+ L ++ +E ++ + +HKN
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTRVQIIE 221
++ LLG C +I EY +L +L +D R+ + +T ++
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 207
Query: 222 ---GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
+A+G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T+
Sbjct: 208 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++ +SDV+SFGVL+ EI +
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ DF I L + + + QGL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK--SYLFQLLQGLAF 120
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 175
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 210
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 28/216 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRLSG-RSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K ++ +AVK L +E+ L ++ +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTRVQIIE 221
++ LLG C +I EY +L +L +D R+ + +T ++
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 161
Query: 222 ---GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
+A+G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T+
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++ +SDV+SFGVL+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNL 173
F K+GEG +G VYK + G+ +A+K RL +E E S++ ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V+LL +++ L++E++ F I L + + + QGL + H +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLSFCHSH 122
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE L
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLG 177
Query: 294 -GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
+S D++S G + E+V+ + L+ DS
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 208
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 112/214 (52%), Gaps = 14/214 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNL 173
F K+GEG +G VYK + G+ +A+K RL +E E S++ ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V+LL +++ L++E++ ++ L F+ D + + + + QGL + H +
Sbjct: 64 VKLLDVIHTENKLYLVFEHV-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE L
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLG 176
Query: 294 -GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
+S D++S G + E+V+ + L+ DS
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 207
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 23/208 (11%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLS-GRSEQGLREMK-NEASVIAKVQHKNLV 174
+ K+GEG +G VYK G+ A+K++ + ++G+ E S++ +++H N+V
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRIL------LDWVTRVQIIEGIAQGLL 228
+L K +L++E++ K++L L+ VT + + G+
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQD---------LKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
Y H R++HRDLK N+L++++ KI+DFG+AR G ++ T IV T Y +P
Sbjct: 115 YCHDR---RVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEIV-TLWYRAP 169
Query: 289 EYAL-EGIFSIKSDVFSFGVLLLEIVSG 315
+ + +S D++S G + E+V+G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 120/237 (50%), Gaps = 24/237 (10%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKG--VLRKGDEIAVKRL---SGRSEQGLREMKNEASV--I 165
A + ++GEG +G V+K + G +A+KR+ +G L ++ A + +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 166 AKVQHKNLVRLLGCCI----DKDEKI-LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQII 220
+H N+VRL C D++ K+ L++E++ ++ L +L D + T ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 221 EGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIV 280
+ +GL +LH + R++HRDLK NIL+ K++DFG+ARI Q + +V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVV 180
Query: 281 GTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS-LNLLGYVWDL 336
T Y +PE L+ ++ D++S G + E+ K L+R S ++ LG + D+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP---LFRGSSDVDQLGKILDV 234
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 110/224 (49%), Gaps = 35/224 (15%)
Query: 110 VSTATNTFSDTNK----LGEGGFGPVYKGVLRK----GDEIAVKRLSGRSEQGLREMKNE 161
V +T FSD K LG+G FG V +L K G E AVK +S R +++ ++
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQ---VKQKTDK 70
Query: 162 ASVIAKVQ------HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT-KRILLDWV 214
S++ +VQ H N+++L DK L+ E L FD R V
Sbjct: 71 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEV 126
Query: 215 TRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNE 271
+II + G+ Y+H + +I+HRDLK N+LL+ KD N +I DFG++ E
Sbjct: 127 DAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---E 180
Query: 272 LQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+GT Y++PE L G + K DV+S GV+L ++SG
Sbjct: 181 ASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 28/216 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRLSG-RSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K ++ +AVK L +E+ L ++ +E ++ + +HKN
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTRVQIIE 221
++ LLG C +I EY +L +L +D R+ + +T ++
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 148
Query: 222 ---GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
+A+G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T+
Sbjct: 149 CTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++ +SDV+SFGVL+ EI +
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 28/216 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRLSG-RSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K ++ +AVK L +E+ L ++ +E ++ + +HKN
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTRVQIIE 221
++ LLG C +I EY +L +L +D R+ + +T ++
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 153
Query: 222 ---GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
+A+G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T+
Sbjct: 154 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++ +SDV+SFGVL+ EI +
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 28/216 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRLSG-RSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K ++ +AVK L +E+ L ++ +E ++ + +HKN
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTRVQIIE 221
++ LLG C +I EY +L +L +D R+ + +T ++
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 150
Query: 222 ---GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
+A+G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T+
Sbjct: 151 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++ +SDV+SFGVL+ EI +
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 28/216 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRLSG-RSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K ++ +AVK L +E+ L ++ +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTRVQIIE 221
++ LLG C +I EY +L +L +D R+ + +T ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 161
Query: 222 ---GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
+A+G+ YL + + IHRDL A N+L+ ++ +I+DFG+AR + T+
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++ +SDV+SFGVL+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 23/208 (11%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLS-GRSEQGLREMK-NEASVIAKVQHKNLV 174
+ K+GEG +G VYK G+ A+K++ + ++G+ E S++ +++H N+V
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRIL------LDWVTRVQIIEGIAQGLL 228
+L K +L++E++ K++L L+ VT + + G+
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQD---------LKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
Y H R++HRDLK N+L++++ KI+DFG+AR G ++ T +V T Y +P
Sbjct: 115 YCHDR---RVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEVV-TLWYRAP 169
Query: 289 EYAL-EGIFSIKSDVFSFGVLLLEIVSG 315
+ + +S D++S G + E+V+G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 120/237 (50%), Gaps = 24/237 (10%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKG--VLRKGDEIAVKRL---SGRSEQGLREMKNEASV--I 165
A + ++GEG +G V+K + G +A+KR+ +G L ++ A + +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 166 AKVQHKNLVRLLGCCI----DKDEKI-LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQII 220
+H N+VRL C D++ K+ L++E++ ++ L +L D + T ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 221 EGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIV 280
+ +GL +LH + R++HRDLK NIL+ K++DFG+ARI Q + +V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVV 180
Query: 281 GTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS-LNLLGYVWDL 336
T Y +PE L+ ++ D++S G + E+ K L+R S ++ LG + D+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP---LFRGSSDVDQLGKILDV 234
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 107/208 (51%), Gaps = 23/208 (11%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLS-GRSEQGLREMK-NEASVIAKVQHKNLV 174
+ K+GEG +G VYK G+ A+K++ + ++G+ E S++ +++H N+V
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRIL------LDWVTRVQIIEGIAQGLL 228
+L K +L++E++ K++L L+ VT + + G+
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQD---------LKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
Y H R++HRDLK N+L++++ KI+DFG+AR G ++ T +V T Y +P
Sbjct: 115 YCHDR---RVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEVV-TLWYRAP 169
Query: 289 EYAL-EGIFSIKSDVFSFGVLLLEIVSG 315
+ + +S D++S G + E+V+G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 110/224 (49%), Gaps = 35/224 (15%)
Query: 110 VSTATNTFSDTNK----LGEGGFGPVYKGVLRK----GDEIAVKRLSGRSEQGLREMKNE 161
V +T FSD K LG+G FG V +L K G E AVK +S R +++ ++
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQ---VKQKTDK 76
Query: 162 ASVIAKVQ------HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT-KRILLDWV 214
S++ +VQ H N+++L DK L+ E L FD R V
Sbjct: 77 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEV 132
Query: 215 TRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNE 271
+II + G+ Y+H + +I+HRDLK N+LL+ KD N +I DFG++ E
Sbjct: 133 DAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLST---HFE 186
Query: 272 LQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+GT Y++PE L G + K DV+S GV+L ++SG
Sbjct: 187 ASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 120/237 (50%), Gaps = 24/237 (10%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKG--VLRKGDEIAVKRL---SGRSEQGLREMKNEASV--I 165
A + ++GEG +G V+K + G +A+KR+ +G L ++ A + +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 166 AKVQHKNLVRLLGCCI----DKDEKI-LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQII 220
+H N+VRL C D++ K+ L++E++ ++ L +L D + T ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 221 EGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIV 280
+ +GL +LH + R++HRDLK NIL+ K++DFG+ARI Q + +V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVV 180
Query: 281 GTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS-LNLLGYVWDL 336
T Y +PE L+ ++ D++S G + E+ K L+R S ++ LG + D+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP---LFRGSSDVDQLGKILDV 234
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 110/224 (49%), Gaps = 35/224 (15%)
Query: 110 VSTATNTFSDTNK----LGEGGFGPVYKGVLRK----GDEIAVKRLSGRSEQGLREMKNE 161
V +T FSD K LG+G FG V +L K G E AVK +S R +++ ++
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQ---VKQKTDK 93
Query: 162 ASVIAKVQ------HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT-KRILLDWV 214
S++ +VQ H N+++L DK L+ E L FD R V
Sbjct: 94 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEV 149
Query: 215 TRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNE 271
+II + G+ Y+H + +I+HRDLK N+LL+ KD N +I DFG++ E
Sbjct: 150 DAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---E 203
Query: 272 LQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+GT Y++PE L G + K DV+S GV+L ++SG
Sbjct: 204 ASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 110/224 (49%), Gaps = 35/224 (15%)
Query: 110 VSTATNTFSDTNK----LGEGGFGPVYKGVLRK----GDEIAVKRLSGRSEQGLREMKNE 161
V +T FSD K LG+G FG V +L K G E AVK +S R +++ ++
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQ---VKQKTDK 94
Query: 162 ASVIAKVQ------HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT-KRILLDWV 214
S++ +VQ H N+++L DK L+ E L FD R V
Sbjct: 95 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEV 150
Query: 215 TRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNE 271
+II + G+ Y+H + +I+HRDLK N+LL+ KD N +I DFG++ E
Sbjct: 151 DAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---E 204
Query: 272 LQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+GT Y++PE L G + K DV+S GV+L ++SG
Sbjct: 205 ASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRL-------SGRSEQGLREMKNEASVIAKVQHK-NLV 174
LG G FG V + D+ A R G + R + +E ++ + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 175 RLLGCCIDKDEKILIY----------EYMPNKSLDFFLFDPTKRILLDWVTRVQIIE--- 221
LLG C +++ Y+ +K +F + P + + D++T +I
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKP-EDLYKDFLTLEHLIXYSF 155
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG 281
+A+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 156 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 32/208 (15%)
Query: 123 LGEGGFGPVYKGV-LRKGDEI-------AVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
LG G FG V+KGV + +G+ I ++ SGR Q + + + I + H ++V
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDHMLAIGSLDHAHIV 96
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------ILLDWVTRVQIIEGIAQG 226
RLLG C + L+ +Y+P SL D ++ +LL+W + IA+G
Sbjct: 97 RLLGLCPGSSLQ-LVTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQ------IAKG 145
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL ++ ++HR+L A N+LL +++DFG+A + ++ Q S +M
Sbjct: 146 MYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 202
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E G ++ +SDV+S+GV + E+++
Sbjct: 203 ALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 20/204 (9%)
Query: 123 LGEGGFGPVYKGVLR-------KGDEIAVKRLSGRSE-QGLREMKNEASVIAKVQHKNLV 174
LGEG FG V + R G+++AVK L S + ++K E ++ + H+N+V
Sbjct: 29 LGEGHFGKVE--LCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 175 RLLGCCI-DKDEKI-LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
+ G C D I LI E++P+ SL +L P + ++ +++ I +G+ YL
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL-- 142
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE--LQANTSRIVGTYGYMSPEY 290
+ +HRDL A N+L++ + KI DFG+ + ++ R + Y +PE
Sbjct: 143 -GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APEC 200
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVS 314
++ F I SDV+SFGV L E+++
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 32/208 (15%)
Query: 123 LGEGGFGPVYKGV-LRKGDEI-------AVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
LG G FG V+KGV + +G+ I ++ SGR Q + + + I + H ++V
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDHMLAIGSLDHAHIV 78
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR--------ILLDWVTRVQIIEGIAQG 226
RLLG C + L+ +Y+P SL D ++ +LL+W + IA+G
Sbjct: 79 RLLGLCPGSSLQ-LVTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQ------IAKG 127
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
+ YL ++ ++HR+L A N+LL +++DFG+A + ++ Q S +M
Sbjct: 128 MYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 184
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+ E G ++ +SDV+S+GV + E+++
Sbjct: 185 ALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ F I L + + + QGL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAF 118
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 173
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 208
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 24/213 (11%)
Query: 123 LGEGGFGPVYKGVLRKGDE------IAVKRL-SGRSEQGLREMKNEASVIAKVQHK-NLV 174
LG G FG V + D+ +AVK L G + R + +E ++ + H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 175 RLLGCCIDKDEKILIY----------EYMPNKSLDFFLFDPTKRILLDWVTRVQIIE--- 221
LLG C +++ Y+ +K +F + + + D++T +I
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG 281
+A+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 20/204 (9%)
Query: 123 LGEGGFGPVYKGVLR-------KGDEIAVKRLSGRSE-QGLREMKNEASVIAKVQHKNLV 174
LGEG FG V + R G+++AVK L S + ++K E ++ + H+N+V
Sbjct: 17 LGEGHFGKVE--LCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 175 RLLGCCI-DKDEKI-LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
+ G C D I LI E++P+ SL +L P + ++ +++ I +G+ YL
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL-- 130
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE--LQANTSRIVGTYGYMSPEY 290
+ +HRDL A N+L++ + KI DFG+ + ++ R + Y +PE
Sbjct: 131 -GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APEC 188
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVS 314
++ F I SDV+SFGV L E+++
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNL 173
F K+GEG +G VYK + G+ +A+ RL +E E S++ ++ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V+LL +++ L++E++ F I L + + + QGL + H +
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH 122
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE L
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLG 177
Query: 294 -GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
+S D++S G + E+V+ + L+ DS
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 208
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNL 173
F K+GEG +G VYK + G+ +A+ RL +E E S++ ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V+LL +++ L++E++ F I L + + + QGL + H +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH 121
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
R++HRDLK N+L++ + K++DFG+AR G ++ T +V T Y +PE L
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVV-TLWYRAPEILLG 176
Query: 294 -GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
+S D++S G + E+V+ + L+ DS
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 207
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNL 173
F K+GEG +G VYK + G+ +A+K RL +E E S++ ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V+LL +++ L++E++ F I L + + + QGL + H +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH 121
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE L
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLG 176
Query: 294 -GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
+S D++S G + E+V+ + L+ DS
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 207
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ F I L + + + QGL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAF 118
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 173
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 208
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
K+GEG G V +R G +AVK++ R +Q + NE ++ QH+N+V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ DE ++ E++ +L D ++ + + Q L LH +IH
Sbjct: 87 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 139
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYALEGIFSIK 299
RD+K+ +ILL D K+SDFG C + + +VGT +M+PE + +
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 300 SDVFSFGVLLLEIVSGK 316
D++S G++++E+V G+
Sbjct: 197 VDIWSLGIMVIEMVDGE 213
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ F I L + + + QGL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAF 121
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 176
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 211
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ F I L + + + QGL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAF 120
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 175
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 210
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ F I L + + + QGL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAF 118
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 173
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 208
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 121 NKLGEGGFGPVYKGVLRKG---------DEIAVKRLSGRSEQGLREMKNEASVIAKVQHK 171
K+GEG FG K +L K EI + R+S + + E + E +V+A ++H
Sbjct: 30 QKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKERE---ESRREVAVLANMKHP 83
Query: 172 NLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLH 231
N+V+ + ++ +Y L F + K +L QI++ Q L L
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDL-FKRINAQKGVLFQ---EDQILDWFVQICLALK 139
Query: 232 QYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 291
+I+HRD+K+ NI L KD ++ DFG+AR+ A +GT Y+SPE
Sbjct: 140 HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC--IGTPYYLSPEIC 197
Query: 292 LEGIFSIKSDVFSFGVLLLEIVSGK 316
++ KSD+++ G +L E+ + K
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + A + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 189 VDVWSCGIVLTAMLAGE 205
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ F I L + + + QGL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAF 119
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 174
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 209
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 112/218 (51%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ ++ L F+ D + + + + QGL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 176
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 211
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ F I L + + + QGL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAF 120
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 175
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
K+GEG G V +R G +AVK++ R +Q + NE ++ QH+N+V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ DE ++ E++ +L D ++ + + Q L LH +IH
Sbjct: 96 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 148
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYALEGIFSIK 299
RD+K+ +ILL D K+SDFG C + + +VGT +M+PE + +
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 300 SDVFSFGVLLLEIVSGK 316
D++S G++++E+V G+
Sbjct: 206 VDIWSLGIMVIEMVDGE 222
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
K+GEG G V +R G +AVK++ R +Q + NE ++ QH+N+V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ DE ++ E++ +L D ++ + + Q L LH +IH
Sbjct: 91 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 143
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYALEGIFSIK 299
RD+K+ +ILL D K+SDFG C + + +VGT +M+PE + +
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 300 SDVFSFGVLLLEIVSGK 316
D++S G++++E+V G+
Sbjct: 201 VDIWSLGIMVIEMVDGE 217
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ F I L + + + QGL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAF 120
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 121 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 175
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 210
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNL 173
F K+GEG +G VYK + G+ +A+K RL +E E S++ ++ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V+LL +++ L++E++ F I L + + + QGL + H +
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH 121
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE L
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLG 176
Query: 294 -GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
+S D++S G + E+V+ + L+ DS
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 207
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
K+GEG G V +R G +AVK++ R +Q + NE ++ QH+N+V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ DE ++ E++ +L D ++ + + Q L LH +IH
Sbjct: 98 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 150
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYALEGIFSIK 299
RD+K+ +ILL D K+SDFG C + + +VGT +M+PE + +
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 300 SDVFSFGVLLLEIVSGK 316
D++S G++++E+V G+
Sbjct: 208 VDIWSLGIMVIEMVDGE 224
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ F I L + + + QGL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAF 119
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 120 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 174
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 209
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ F I L + + + QGL +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAF 122
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 123 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 177
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 212
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ F I L + + + QGL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAF 118
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 173
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 208
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ F I L + + + QGL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAF 121
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 176
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 211
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 28/216 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRLSG-RSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K ++ +AVK L +E+ L ++ +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTRVQIIE 221
++ LLG C +I Y +L +L +D R+ + +T ++
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 161
Query: 222 ---GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
+A+G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T+
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++ +SDV+SFGVL+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNL 173
F K+GEG +G VYK + G+ +A+K RL +E E S++ ++ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V+LL +++ L++E++ F I L + + + QGL + H +
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFCHSH 123
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE L
Sbjct: 124 ---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPEILLG 178
Query: 294 -GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
+S D++S G + E+V+ + L+ DS
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 209
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 16/219 (7%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLF-DPTKRILLDWVTRVQIIEGIAQGLL 228
H N+V+LL +++ L++E++ S+D F D + + + + QGL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
+ H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +P
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAP 175
Query: 289 EYALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
E L +S D++S G + E+V+ + L+ DS
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 211
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 53/233 (22%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
F + +G GGFG V+K R G ++R+ +E+ RE+K +AK+ H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVK----ALAKLDHVNIVH 69
Query: 176 LLGCCIDKDEKILIYEYMP---NKSLDFFLFDPT---------------------KRILL 211
GC ++Y P + SL+ +DP K L
Sbjct: 70 YNGCWDG-------FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLE 122
Query: 212 DWVTR-----------VQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISD 260
W+ + +++ E I +G+ Y+H ++IHRDLK SNI L KI D
Sbjct: 123 QWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 261 FGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIV 313
FG+ + +R GT YMSPE + + D+++ G++L E++
Sbjct: 180 FGLVTSLKND---GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 16/219 (7%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLF-DPTKRILLDWVTRVQIIEGIAQGLL 228
H N+V+LL +++ L++E++ S+D F D + + + + QGL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
+ H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +P
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAP 173
Query: 289 EYALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
E L +S D++S G + E+V+ + L+ DS
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 209
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 108/224 (48%), Gaps = 35/224 (15%)
Query: 110 VSTATNTFSDTNK----LGEGGFGPVYKGVLRK----GDEIAVKRLSGRSEQGLREMKNE 161
V +T FSD K LG+G FG V +L K G E AVK +S R +++ ++
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQ---VKQKTDK 70
Query: 162 ASVIAKVQ------HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT-KRILLDWV 214
S++ +VQ H N+ +L DK L+ E L FD R V
Sbjct: 71 ESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEV 126
Query: 215 TRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNE 271
+II + G+ Y H + +I+HRDLK N+LL+ KD N +I DFG++ E
Sbjct: 127 DAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---E 180
Query: 272 LQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+GT Y++PE L G + K DV+S GV+L ++SG
Sbjct: 181 ASKKXKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 123 LGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
LG+G +G VY G L IA+K + R + + + E ++ ++HKN+V+ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 182 DKDEKILIYEYMPNKSLDFFL---FDPTK--RILLDWVTRVQIIEGIAQGLLYLHQYSRV 236
+ + E +P SL L + P K + + T+ QI+E GL YLH
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QILE----GLKYLHDN--- 141
Query: 237 RIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
+I+HRD+K N+L++ KISDFG ++ G + T GT YM+PE +G
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGP 199
Query: 296 --FSIKSDVFSFGVLLLEIVSGK 316
+ +D++S G ++E+ +GK
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGK 222
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 23/235 (9%)
Query: 94 SKKKEVDQLPLFSFSSVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQ 153
S + +D++ L S++ F +G G +G VYKG K ++A ++ +
Sbjct: 6 SPARSLDEIDL---SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD 62
Query: 154 GLREMKNEASVIAKV-QHKNLVRLLGCCIDK------DEKILIYEYMPNKSLDFFLFDPT 206
E+K E +++ K H+N+ G I K D+ L+ E+ S+ + +
Sbjct: 63 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK 122
Query: 207 KRILLD-WVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR 265
L + W+ I I +GL +LHQ+ ++IHRD+K N+LL ++ K+ DFG++
Sbjct: 123 GNTLKEEWI--AYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSA 177
Query: 266 ICGGNELQANTSRIVGTYGYMSPEYAL-----EGIFSIKSDVFSFGVLLLEIVSG 315
+ NT +GT +M+PE + + KSD++S G+ +E+ G
Sbjct: 178 QLDRTVGRRNT--FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNLV 174
F LG GGFG V++ + D A+KR+ + + RE + E +AK++H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE------------G 222
R ++K+ + P L + K L DW+ IE
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQ--------- 273
IA+ + +LH ++HRDLK SNI D K+ DFG+ +E +
Sbjct: 127 IAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 274 -ANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIV 313
A + VGT YMSPE +S K D+FS G++L E++
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
K+GEG G V +R G +AVK++ R +Q + NE ++ QH+N+V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE--------GIAQGLLYLHQ 232
+ DE ++ E++ +L D VT ++ E + Q L LH
Sbjct: 218 LVGDELWVVMEFLEGGALT------------DIVTHTRMNEEQIAAVCLAVLQALSVLHA 265
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYA 291
+IHRD+K+ +ILL D K+SDFG C + + +VGT +M+PE
Sbjct: 266 QG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELI 319
Query: 292 LEGIFSIKSDVFSFGVLLLEIVSGK 316
+ + D++S G++++E+V G+
Sbjct: 320 SRLPYGPEVDIWSLGIMVIEMVDGE 344
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 28/216 (12%)
Query: 123 LGEGGFGPVY--------KGVLRKGDEIAVKRLSG-RSEQGLREMKNEASVIAKV-QHKN 172
LGEG FG V K ++ +AVK L +E+ L ++ +E ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFL-----------FDPTKRILLDWVTRVQIIE 221
++ LLG C +I Y +L +L +D R+ + +T ++
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYD-INRVPEEQMTFKDLVS 161
Query: 222 ---GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR 278
+A+G+ YL + + IHRDL A N+L+ ++ KI+DFG+AR + T+
Sbjct: 162 CTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++ +SDV+SFGVL+ EI +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 123 LGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCI 181
LG+G +G VY G L IA+K + R + + + E ++ ++HKN+V+ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 182 DKDEKILIYEYMPNKSLDFFL---FDPTK--RILLDWVTRVQIIEGIAQGLLYLHQYSRV 236
+ + E +P SL L + P K + + T+ QI+E GL YLH
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QILE----GLKYLHDN--- 127
Query: 237 RIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
+I+HRD+K N+L++ KISDFG ++ G + T GT YM+PE +G
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGP 185
Query: 296 --FSIKSDVFSFGVLLLEIVSGK 316
+ +D++S G ++E+ +GK
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGK 208
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 25/217 (11%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLLGCCI 181
+G+G +G V++G +G+ +AVK S R E+ RE + +V+ ++H+N++ + +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIASDM 72
Query: 182 ----DKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLH-----Q 232
+ LI Y SL +D + LD V+ ++I+ IA GL +LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARIC--GGNELQANTSRIVGTYGYMSPEY 290
+ I HRDLK+ NIL+ K+ I+D G+A + N+L + VGT YM+PE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 291 ALEGI------FSIKSDVFSFGVLLLEIVSGKKNTGL 321
E I + D+++FG++L E+ + G+
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQ 169
+ F K+GEG +G VYK + G+ +A+K RL +E E S++ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H N+V+LL +++ L++E++ F I L + + + QGL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAF 121
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + R++HRDLK N+L++ + K++DFG+AR G ++ +V T Y +PE
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV-TLWYRAPE 176
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
L +S D++S G + E+V+ + L+ DS
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR---ALFPGDS 211
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 25/217 (11%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLLGCCI 181
+G+G +G V++G +G+ +AVK S R E+ RE + +V+ ++H+N++ + +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIASDM 72
Query: 182 ----DKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLH-----Q 232
+ LI Y SL +D + LD V+ ++I+ IA GL +LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARIC--GGNELQANTSRIVGTYGYMSPEY 290
+ I HRDLK+ NIL+ K+ I+D G+A + N+L + VGT YM+PE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 291 ALEGI------FSIKSDVFSFGVLLLEIVSGKKNTGL 321
E I + D+++FG++L E+ + G+
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 110/217 (50%), Gaps = 25/217 (11%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLLGCCI 181
+G+G +G V++G +G+ +AVK S R E+ RE + +V+ ++H+N++ + +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVM--LRHENILGFIASDM 101
Query: 182 ----DKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLH-----Q 232
+ LI Y SL +D + LD V+ ++I+ IA GL +LH
Sbjct: 102 TSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGT 157
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARIC--GGNELQANTSRIVGTYGYMSPEY 290
+ I HRDLK+ NIL+ K+ I+D G+A + N+L + VGT YM+PE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 217
Query: 291 ALEGI------FSIKSDVFSFGVLLLEIVSGKKNTGL 321
E I + D+++FG++L E+ + G+
Sbjct: 218 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 254
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 28/205 (13%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
K+GEG G V +R G +AVK++ R +Q + NE ++ QH+N+V +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE--------GIAQGLLYLHQ 232
+ DE ++ E++ +L D VT ++ E + Q L LH
Sbjct: 141 LVGDELWVVMEFLEGGALT------------DIVTHTRMNEEQIAAVCLAVLQALSVLHA 188
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYA 291
+IHRD+K+ +ILL D K+SDFG C + + +VGT +M+PE
Sbjct: 189 QG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELI 242
Query: 292 LEGIFSIKSDVFSFGVLLLEIVSGK 316
+ + D++S G++++E+V G+
Sbjct: 243 SRLPYGPEVDIWSLGIMVIEMVDGE 267
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 22/202 (10%)
Query: 123 LGEGGFGPVYKGVLR-KGDEIAVKRLSGRSEQG--LREMKNEASVIAKVQHKNLVRLLGC 179
LG+G FG V K R E AVK ++ S + + E ++ K+ H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPT-KRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
D ++ E L FD KR +II+ + G+ Y+H+++ I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 239 IHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRI--VGTYGYMSPEYALE 293
+HRDLK NILL +KD + KI DFG++ C Q NT +GT Y++PE L
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLS-TC----FQQNTKMKDRIGTAYYIAPE-VLR 196
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
G + K DV+S GV+L ++SG
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 73 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 126
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 127 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 186
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 187 VDVWSCGIVLTAMLAGE 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 189 VDVWSCGIVLTAMLAGE 205
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 189 VDVWSCGIVLTAMLAGE 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 28/214 (13%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
F + +G GGFG V+K R G +KR+ +E+ RE+K +AK+ H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVK----ALAKLDHVNIVH 68
Query: 176 LLGCC--IDKDEK--------------ILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQI 219
GC D D + + E+ +L+ ++ + + LD V +++
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALEL 127
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
E I +G+ Y+H ++I+RDLK SNI L KI DFG+ + R
Sbjct: 128 FEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRXRS 181
Query: 280 VGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIV 313
GT YMSPE + + D+++ G++L E++
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 189 VDVWSCGIVLTAMLAGE 205
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 123 LGEGGFGPVYKGV-LRKGDEIAVK----RLSGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
LGEG FG V G ++A+K ++ +S+ R ++ E S + ++H ++++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 70
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
KDE I++ EY N+ D+ + +R + + + I + Y H++ +
Sbjct: 71 DVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCHRH---K 123
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARI-CGGNELQANTSRIVGTYGYMSPEYALEGIF 296
I+HRDLK N+LLD+ +N KI+DFG++ I GN L+ + G+ Y +PE ++
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKLY 179
Query: 297 S-IKSDVFSFGVLL 309
+ + DV+S GV+L
Sbjct: 180 AGPEVDVWSCGVIL 193
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRKGDEIAV----KRLSGRSEQGLREMKNEASVIAKVQH 170
NTF LG+GGFG V +R ++ ++ + +G NE ++ KV
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
+ +V L KD L+ M L F ++ + + E I GL L
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE-ICCGLEDL 302
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPE 289
H R RI++RDLK NILLD + +ISD G+A + G ++ VGT GYM+PE
Sbjct: 303 H---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR----VGTVGYMAPE 355
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSGK 316
++ D ++ G LL E+++G+
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 12/201 (5%)
Query: 123 LGEGGFGPVYKGVLRKGD-EIAVKR---LSGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
+G G +G K + RK D +I V + +E + + +E +++ +++H N+VR
Sbjct: 14 IGTGSYGRCQK-IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 179 CCIDKDEKIL--IYEYMPNKSLDFFLFDPTK-RILLDWVTRVQIIEGIAQGLLYLHQYSR 235
ID+ L + EY L + TK R LD ++++ + L H+ S
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 236 --VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
++HRDLK +N+ LD N K+ DFG+ARI + A T VGT YMSPE
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNR 190
Query: 294 GIFSIKSDVFSFGVLLLEIVS 314
++ KSD++S G LL E+ +
Sbjct: 191 MSYNEKSDIWSLGCLLYELCA 211
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 189 VDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 189 VDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 189 VDVWSCGIVLTAMLAGE 205
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 123 LGEGGFGPVYKGV-LRKGDEIAVK----RLSGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
LGEG FG V G ++A+K ++ +S+ R ++ E S + ++H ++++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 80
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
KDE I++ EY N+ D+ + +R + + + I + Y H++ +
Sbjct: 81 DVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCHRH---K 133
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARI-CGGNELQANTSRIVGTYGYMSPEYALEGIF 296
I+HRDLK N+LLD+ +N KI+DFG++ I GN L+ + G+ Y +PE ++
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKLY 189
Query: 297 S-IKSDVFSFGVLL 309
+ + DV+S GV+L
Sbjct: 190 AGPEVDVWSCGVIL 203
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRKGDEIAV----KRLSGRSEQGLREMKNEASVIAKVQH 170
NTF LG+GGFG V +R ++ ++ + +G NE ++ KV
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
+ +V L KD L+ M L F ++ + + E I GL L
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE-ICCGLEDL 302
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPE 289
H R RI++RDLK NILLD + +ISD G+A + G ++ VGT GYM+PE
Sbjct: 303 H---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR----VGTVGYMAPE 355
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSGK 316
++ D ++ G LL E+++G+
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG +G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 128
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 188
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 189 VDVWSCGIVLTAMLAGE 205
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 123 LGEGGFGPVYKGV-LRKGDEIAVK----RLSGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
LGEG FG V G ++A+K ++ +S+ R ++ E S + ++H ++++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 79
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
KDE I++ EY N+ D+ + +R + + + I + Y H++ +
Sbjct: 80 DVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCHRH---K 132
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARI-CGGNELQANTSRIVGTYGYMSPEYALEGIF 296
I+HRDLK N+LLD+ +N KI+DFG++ I GN L+ + G+ Y +PE ++
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKLY 188
Query: 297 S-IKSDVFSFGVLL 309
+ + DV+S GV+L
Sbjct: 189 AGPEVDVWSCGVIL 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 123 LGEGGFGPVYKGV-LRKGDEIAVK----RLSGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
LGEG FG V G ++A+K ++ +S+ R ++ E S + ++H ++++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR-IEREISYLRLLRHPHIIKLY 74
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
KDE I++ EY N+ D+ + +R + + + I + Y H++ +
Sbjct: 75 DVIKSKDEIIMVIEYAGNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCHRH---K 127
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARI-CGGNELQANTSRIVGTYGYMSPEYALEGIF 296
I+HRDLK N+LLD+ +N KI+DFG++ I GN L+ + G+ Y +PE ++
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVISGKLY 183
Query: 297 S-IKSDVFSFGVLL 309
+ + DV+S GV+L
Sbjct: 184 AGPEVDVWSCGVIL 197
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 22/202 (10%)
Query: 123 LGEGGFGPVYKGVLR-KGDEIAVKRLSGRSEQG--LREMKNEASVIAKVQHKNLVRLLGC 179
LG+G FG V K R E AVK ++ S + + E ++ K+ H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPT-KRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
D ++ E L FD KR +II+ + G+ Y+H+++ I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 239 IHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRI--VGTYGYMSPEYALE 293
+HRDLK NILL +KD + KI DFG++ C Q NT +GT Y++PE L
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLS-TC----FQQNTKMKDRIGTAYYIAPE-VLR 196
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
G + K DV+S GV+L ++SG
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 12/201 (5%)
Query: 123 LGEGGFGPVYKGVLRKGD-EIAVKR---LSGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
+G G +G K + RK D +I V + +E + + +E +++ +++H N+VR
Sbjct: 14 IGTGSYGRCQK-IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 179 CCIDKDEKIL--IYEYMPNKSLDFFLFDPTK-RILLDWVTRVQIIEGIAQGLLYLHQYSR 235
ID+ L + EY L + TK R LD ++++ + L H+ S
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 236 --VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
++HRDLK +N+ LD N K+ DFG+ARI +E A VGT YMSPE
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA--KEFVGTPYYMSPEQMNR 190
Query: 294 GIFSIKSDVFSFGVLLLEIVS 314
++ KSD++S G LL E+ +
Sbjct: 191 MSYNEKSDIWSLGCLLYELCA 211
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 22/202 (10%)
Query: 123 LGEGGFGPVYKGVLR-KGDEIAVKRLSGRSEQG--LREMKNEASVIAKVQHKNLVRLLGC 179
LG+G FG V K R E AVK ++ S + + E ++ K+ H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 180 CIDKDEKILIYEYMPNKSLDFFLFDPT-KRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
D ++ E L FD KR +II+ + G+ Y+H+++ I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 239 IHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRI--VGTYGYMSPEYALE 293
+HRDLK NILL +KD + KI DFG++ C Q NT +GT Y++PE L
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLS-TC----FQQNTKMKDRIGTAYYIAPE-VLR 196
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
G + K DV+S GV+L ++SG
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 99/216 (45%), Gaps = 19/216 (8%)
Query: 109 SVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEI-AVKRLSGRSEQGLREMKNEASVIAK 167
+ F LG+G FG V+ +K ++ A+K L + + L + E +++ K
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKAL--KKDVVLMDDDVECTMVEK 69
Query: 168 ------VQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
+H L + K+ + EY+ L + + K D
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAA 126
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNEL-QANTSRIV 280
I GL +LH I++RDLK NILLDKD + KI+DFGM C N L A T+
Sbjct: 127 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGM---CKENMLGDAKTNEFC 180
Query: 281 GTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
GT Y++PE L ++ D +SFGVLL E++ G+
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 119/236 (50%), Gaps = 23/236 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLS-GRSEQGLR-EMKNEASVIAKVQ 169
AT+ + ++G G +G VYK G +A+K + E+GL E +++ +++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 170 ---HKNLVRLLGCC----IDKDEKI-LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
H N+VRL+ C D++ K+ L++E++ ++ L +L D L T ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG 281
+GL +LH I+HRDLK NIL+ K++DFG+ARI Q + +V
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALAPVVV 173
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS-LNLLGYVWDL 336
T Y +PE L+ ++ D++S G + E+ K L+ +S + LG ++DL
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP---LFCGNSEADQLGKIFDL 226
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 97/202 (48%), Gaps = 19/202 (9%)
Query: 123 LGEGGFGPVYKGVLRKGDEI-AVKRLSGRSEQGLREMKNEASVIAK------VQHKNLVR 175
LG+G FG V+ +K ++ A+K L + + L + E +++ K +H L
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKAL--KKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
+ K+ + EY+ L + + K D I GL +LH
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQFLHSKG- 138
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNEL-QANTSRIVGTYGYMSPEYALEG 294
I++RDLK NILLDKD + KI+DFGM C N L A T+ GT Y++PE L
Sbjct: 139 --IVYRDLKLDNILLDKDGHIKIADFGM---CKENMLGDAKTNXFCGTPDYIAPEILLGQ 193
Query: 295 IFSIKSDVFSFGVLLLEIVSGK 316
++ D +SFGVLL E++ G+
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 123 LGEGGFGPVYKGVLRKGDE------IAVKRL-SGRSEQGLREMKNEASVIAKVQHK-NLV 174
LG G FG V + D+ +AVK L G + R + +E ++ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 175 RLLGCCIDKDEKIL-IYEYMPNKSLDFFL------FDPTK----RILLDWVTRVQIIE-- 221
LLG C ++ I E+ +L +L F P K + D++T +I
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 222 -GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIV 280
+A+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 281 GTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 123 LGEGGFGPVYKGVLRKGDE------IAVKRL-SGRSEQGLREMKNEASVIAKVQHK-NLV 174
LG G FG V + D+ +AVK L G + R + +E ++ + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 175 RLLGCCIDKDEKIL-IYEYMPNKSLDFFL------FDPTKR----ILLDWVTRVQIIE-- 221
LLG C ++ I E+ +L +L F P K + D++T +I
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 222 -GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIV 280
+A+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 281 GTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 123 LGEGGFGPVYKGVLRKGDE------IAVKRL-SGRSEQGLREMKNEASVIAKVQHK-NLV 174
LG G FG V + D+ +AVK L G + R + +E ++ + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 175 RLLGCCIDKDEKIL-IYEYMPNKSLDFFL------FDPTK----RILLDWVTRVQIIE-- 221
LLG C ++ I E+ +L +L F P K + D++T +I
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 222 -GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIV 280
+A+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 281 GTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 123 LGEGGFGPVYKGVLRKGDE------IAVKRL-SGRSEQGLREMKNEASVIAKVQHK-NLV 174
LG G FG V + D+ +AVK L G + R + +E ++ + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 175 RLLGCCIDKDEKIL-IYEYMPNKSLDFFL------FDPTK----RILLDWVTRVQIIE-- 221
LLG C ++ I E+ +L +L F P K + D++T +I
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 222 -GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIV 280
+A+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 281 GTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 19/208 (9%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRL------SGRSEQGLREMKNEASVIAKV 168
+ F ++LG G G V K R I ++L Q +RE++ V+ +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQ----VLHEC 71
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+V G E + E+M SLD L + KRI + + +V I + +GL
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSI--AVLRGLA 128
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
YL + + +I+HRD+K SNIL++ K+ DFG++ G + + + VGT YM+P
Sbjct: 129 YLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMAP 182
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGK 316
E +S++SD++S G+ L+E+ G+
Sbjct: 183 ERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 123 LGEGGFGPVYKGVLRKGDE------IAVKRL-SGRSEQGLREMKNEASVIAKVQHK-NLV 174
LG G FG V + D+ +AVK L G + R + +E ++ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 175 RLLGCCIDKDEKIL-IYEYMPNKSLDFFL------FDPTK----RILLDWVTRVQIIE-- 221
LLG C ++ I E+ +L +L F P K + D++T +I
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 222 -GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIV 280
+A+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 281 GTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 113/220 (51%), Gaps = 34/220 (15%)
Query: 114 TNTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQ------GLREMKNEASVIA 166
+ + K+G+G FG V+K RK G ++A+K++ +E+ LRE+K ++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQ 72
Query: 167 KVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV--------- 217
++H+N+V L+ C K Y K+ + +FD + L ++ V
Sbjct: 73 LLKHENVVNLIEICRTKAS-----PYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEI 127
Query: 218 -QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR---ICGGNELQ 273
++++ + GL Y+H R +I+HRD+KA+N+L+ +D K++DFG+AR + ++
Sbjct: 128 KRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 274 ANTSRIVGTYGYMSPEYAL-EGIFSIKSDVFSFGVLLLEI 312
+R+V T Y PE L E + D++ G ++ E+
Sbjct: 185 RYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 26/207 (12%)
Query: 126 GGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGC-----C 180
G FG V+K L + +AVK + +Q + + E + ++H+N+++ +G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGTS 92
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ-------Y 233
+D D LI + SL FL K ++ W I E +A+GL YLH+
Sbjct: 93 VDVD-LWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
+ I HRD+K+ N+LL ++ I+DFG+A + +T VGT YM+PE LE
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLE 206
Query: 294 GIFSIKSDVF------SFGVLLLEIVS 314
G + + D F + G++L E+ S
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 12/197 (6%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
K+GEG G V + G ++AVK++ R +Q + NE ++ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ DE ++ E++ +L D ++ + + + L YLH +IH
Sbjct: 112 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIH 164
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR-IVGTYGYMSPEYALEGIFSIK 299
RD+K+ +ILL D K+SDFG C + + +VGT +M+PE + +
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFG---FCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 300 SDVFSFGVLLLEIVSGK 316
D++S G++++E++ G+
Sbjct: 222 VDIWSLGIMVIEMIDGE 238
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 15/220 (6%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
++LG+G FG V Y + G +AVK+L R+ + E ++ + +V+
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 176 LLGCCID--KDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G + E L+ EY+P+ L FL R LD + I +G+ YL
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--- 127
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYG--YMSPEYA 291
R +HRDL A NIL++ + + KI+DFG+A++ ++ R G + +PE
Sbjct: 128 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DXXVVREPGQSPIFWYAPESL 186
Query: 292 LEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLG 331
+ IFS +SDV+SFGV+L E+ + + + L ++G
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG 226
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 123 LGEGGFGPVYKGVLRKGDE------IAVKRL-SGRSEQGLREMKNEASVIAKVQHK-NLV 174
LG G FG V + D+ +AVK L G + R + +E ++ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 175 RLLGCCIDKDEKIL-IYEYMPNKSLDFFL------FDPTK----RILLDWVTRVQIIE-- 221
LLG C ++ I E+ +L +L F P K + D++T +I
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 222 -GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIV 280
+A+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 281 GTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 118/236 (50%), Gaps = 23/236 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLS-GRSEQGLR-EMKNEASVIAKVQ 169
AT+ + ++G G +G VYK G +A+K + E+GL E +++ +++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 170 ---HKNLVRLLGCC----IDKDEKI-LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
H N+VRL+ C D++ K+ L++E++ ++ L +L D L T ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG 281
+GL +LH I+HRDLK NIL+ K++DFG+ARI Q +V
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALDPVVV 173
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS-LNLLGYVWDL 336
T Y +PE L+ ++ D++S G + E+ K L+ +S + LG ++DL
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP---LFCGNSEADQLGKIFDL 226
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
LGEG G V V R +E +AVK + R+ +K E + + H+N+V+ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ + + L EY L F +P I + + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGEL-FDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHG---IGITH 127
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
RD+K N+LLD+ N KISDFG+A + N + +++ GT Y++PE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 301 -DVFSFGVLLLEIVSGK 316
DV+S G++L +++G+
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 123 LGEGGFGPVYKGVLRKGD-EIAVKR---LSGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
+G G +G K + RK D +I V + +E + + +E +++ +++H N+VR
Sbjct: 14 IGTGSYGRCQK-IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 179 CCIDKDEKIL--IYEYMPNKSLDFFLFDPTK-RILLDWVTRVQIIEGIAQGLLYLHQYSR 235
ID+ L + EY L + TK R LD ++++ + L H+ S
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 236 --VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
++HRDLK +N+ LD N K+ DFG+ARI N + VGT YMSPE
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVGTPYYMSPEQMNR 190
Query: 294 GIFSIKSDVFSFGVLLLEIVS 314
++ KSD++S G LL E+ +
Sbjct: 191 MSYNEKSDIWSLGCLLYELCA 211
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 110/212 (51%), Gaps = 34/212 (16%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQ------GLREMKNEASVIAKVQHKNLV 174
K+G+G FG V+K RK G ++A+K++ +E+ LRE+K ++ ++H+N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 80
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV----------QIIEGIA 224
L+ C K Y K + +FD + L ++ V ++++ +
Sbjct: 81 NLIEICRTKASP-----YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR---ICGGNELQANTSRIVG 281
GL Y+H R +I+HRD+KA+N+L+ +D K++DFG+AR + ++ +R+V
Sbjct: 136 NGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV- 191
Query: 282 TYGYMSPEYAL-EGIFSIKSDVFSFGVLLLEI 312
T Y PE L E + D++ G ++ E+
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P + L +K D I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELANALS 127
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 128 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 177
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 123 LGEGGFGPVYKGVLRKGDE------IAVKRL-SGRSEQGLREMKNEASVIAKVQHK-NLV 174
LG G FG V + D+ +AVK L G + R + +E ++ + H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 175 RLLGCCIDKDEKIL-IYEYMPNKSLDFFL------FDPTK----RILLDWVTRVQIIE-- 221
LLG C ++ I E+ +L +L F P K + D++T +I
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 222 -GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIV 280
+A+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 281 GTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 123 LGEGGFGPVYKGVLRKGDE------IAVKRL-SGRSEQGLREMKNEASVIAKVQHK-NLV 174
LG G FG V + D+ +AVK L G + R + +E ++ + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 175 RLLGCCIDKDEKIL-IYEYMPNKSLDFFL------FDPTK----RILLDWVTRVQIIE-- 221
LLG C ++ I E+ +L +L F P K + D++T +I
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 222 -GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIV 280
+A+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 281 GTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEI-AVKRL--SGRSEQGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I A+K L + + G+ +++ E + + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 149 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 198
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 123 LGEGGFGPVYKGVLRKGDE------IAVKRL-SGRSEQGLREMKNEASVIAKVQHK-NLV 174
LG G FG V + D+ +AVK L G + R + +E ++ + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 175 RLLGCCIDKDEKIL-IYEYMPNKSLDFFL------FDPTK----RILLDWVTRVQIIE-- 221
LLG C ++ I E+ +L +L F P K + D++T +I
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 222 -GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIV 280
+A+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 281 GTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 106 SFSSVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNE 161
+ S A F LG+G FG VY ++ I ++ +++ G+ +++ E
Sbjct: 2 AMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 162 ASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
+ + ++H N++RL G D LI EY P L + K D I
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYIT 118
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR--- 278
+A L Y H R+IHRD+K N+LL KI+DFG + + A +SR
Sbjct: 119 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAA 168
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ GT Y+ PE + K D++S GVL E + GK
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 112/220 (50%), Gaps = 34/220 (15%)
Query: 114 TNTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQ------GLREMKNEASVIA 166
+ + K+G+G FG V+K RK G ++A+K++ +E+ LRE+K ++
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQ 71
Query: 167 KVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV--------- 217
++H+N+V L+ C K Y K + +FD + L ++ V
Sbjct: 72 LLKHENVVNLIEICRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI 126
Query: 218 -QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR---ICGGNELQ 273
++++ + GL Y+H R +I+HRD+KA+N+L+ +D K++DFG+AR + ++
Sbjct: 127 KRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 183
Query: 274 ANTSRIVGTYGYMSPEYAL-EGIFSIKSDVFSFGVLLLEI 312
+R+V T Y PE L E + D++ G ++ E+
Sbjct: 184 RYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 112/220 (50%), Gaps = 34/220 (15%)
Query: 114 TNTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQ------GLREMKNEASVIA 166
+ + K+G+G FG V+K RK G ++A+K++ +E+ LRE+K ++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIK----ILQ 72
Query: 167 KVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV--------- 217
++H+N+V L+ C K Y K + +FD + L ++ V
Sbjct: 73 LLKHENVVNLIEICRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI 127
Query: 218 -QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR---ICGGNELQ 273
++++ + GL Y+H R +I+HRD+KA+N+L+ +D K++DFG+AR + ++
Sbjct: 128 KRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 274 ANTSRIVGTYGYMSPEYAL-EGIFSIKSDVFSFGVLLLEI 312
+R+V T Y PE L E + D++ G ++ E+
Sbjct: 185 RYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 123 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDY 172
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 124 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDTLCGTLDY 173
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 124 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDY 173
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 123 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 172
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 125 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDY 174
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 123 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTELCGTLDY 172
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 118/236 (50%), Gaps = 23/236 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLS-GRSEQGLR-EMKNEASVIAKVQ 169
AT+ + ++G G +G VYK G +A+K + E+GL E +++ +++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 170 ---HKNLVRLLGCC----IDKDEKI-LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
H N+VRL+ C D++ K+ L++E++ ++ L +L D L T ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG 281
+GL +LH I+HRDLK NIL+ K++DFG+ARI Q +V
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALFPVVV 173
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS-LNLLGYVWDL 336
T Y +PE L+ ++ D++S G + E+ K L+ +S + LG ++DL
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP---LFCGNSEADQLGKIFDL 226
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 126 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 175
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P ++ L +K D I +A L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 121
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 122 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 171
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 123 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDY 172
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEI-AVKRL--SGRSEQGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I A+K L + + G+ +++ E + + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 149 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLDY 198
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P ++ L +K D I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 122
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 123 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDY 172
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 123 LGEGGFGPVYKGVL--RKGDEIAVKRLSGRSEQGL---REMKNEASVIAKVQHKNLVRLL 177
LGEG FG VY+GV KG++I V + + + L + +EA ++ + H ++V+L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G I+++ +I E P L +L + L +T V I + + YL +
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAYLES---IN 129
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYALEGIF 296
+HRD+ NIL+ K+ DFG++R I + +A+ +R+ +MSPE F
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRF 187
Query: 297 SIKSDVFSFGVLLLEIVSGKKNTGLY 322
+ SDV+ F V + EI+S K +
Sbjct: 188 TTASDVWMFAVCMWEILSFGKQPFFW 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 126/288 (43%), Gaps = 37/288 (12%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
++LG+G FG V Y + G +AVK+L R+ + E ++ + +V+
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 176 LLGCCIDKDEKIL--IYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G + L + EY+P+ L FL R LD + I +G+ YL
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--- 130
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE-----LQANTSRIVGTYGYMSP 288
R +HRDL A NIL++ + + KI+DFG+A++ ++ + S I + +P
Sbjct: 131 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF----WYAP 186
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL----- 343
E + IFS +SDV+SFGV+L E+ + + + L ++G D+ +R L
Sbjct: 187 ESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEE 246
Query: 344 --ELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
L P E + LC S DRP+ + + L
Sbjct: 247 GQRLPAPPACPAEVH---------ELMKLCWAPSPQDRPSFSALGPQL 285
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 128 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 177
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEI-AVKRL--SGRSEQGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I A+K L + + G+ +++ E + + +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 140 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 189
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P ++ L +K D I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 122
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 123 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDY 172
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P ++ L +K D I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 122
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 123 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTXLCGTLDY 172
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 26/219 (11%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRKGD----EIAVKRLSGR--SEQGLREMKNEASVIAKV 168
F+ LG+G FG V + L++ D ++AVK L + + E EA+ + +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 169 QHKNLVRLLGCCIDKDEK------ILIYEYMPNKSLDFFLFDPTKRIL-----LDWVTRV 217
H ++ +L+G + K ++I +M + L FL RI L T V
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL--ASRIGENPFNLPLQTLV 140
Query: 218 QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR--ICGGNELQAN 275
+ + IA G+ YL S IHRDL A N +L +DM ++DFG++R G Q
Sbjct: 141 RFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGC 197
Query: 276 TSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
S++ +++ E + ++++ SDV++FGV + EI++
Sbjct: 198 ASKL--PVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 107 FSSVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEA 162
S A F LG+G FG VY ++ I ++ +++ G+ +++ E
Sbjct: 3 LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 163 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG 222
+ + ++H N++RL G D LI EY P ++ L +K D I
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITE 119
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---I 279
+A L Y H R+IHRD+K N+LL KI+DFG + + A +SR +
Sbjct: 120 LANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDL 169
Query: 280 VGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
GT Y+ PE + K D++S GVL E + GK
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 126/288 (43%), Gaps = 37/288 (12%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
++LG+G FG V Y + G +AVK+L R+ + E ++ + +V+
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 176 LLGCCIDKDEKIL--IYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G + L + EY+P+ L FL R LD + I +G+ YL
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--- 143
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE-----LQANTSRIVGTYGYMSP 288
R +HRDL A NIL++ + + KI+DFG+A++ ++ + S I + +P
Sbjct: 144 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF----WYAP 199
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTL----- 343
E + IFS +SDV+SFGV+L E+ + + + L ++G D+ +R L
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259
Query: 344 --ELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
L P E + LC S DRP+ + + L
Sbjct: 260 GQRLPAPPACPAEVH---------ELMKLCWAPSPQDRPSFSALGPQL 298
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKVQHKN 172
F LG+G FG VY R+ I ++ +++ G+ +++ E + + ++H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
++RL G D LI EY P L + K D I +A L Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGYMSPE 289
R+IHRD+K N+LL + KI+DFG + + A +SR + GT Y+ PE
Sbjct: 131 ---KRVIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRTTLCGTLDYLPPE 180
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSG 315
+ K D++S GVL E + G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 157 EMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSL-----DFFLFDPTKRILL 211
+ KNE +I ++++ + G + DE +IYEYM N S+ FF+ D +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 212 DWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE 271
II+ + Y+H + I HRD+K SNIL+DK+ K+SDFG + +
Sbjct: 149 PIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK 206
Query: 272 LQANTSRIVGTYGYMSPE-YALEGIFS-IKSDVFSFGVLL 309
++ SR GTY +M PE ++ E ++ K D++S G+ L
Sbjct: 207 IKG--SR--GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 128 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGTLDY 177
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P ++ L +K D I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 125
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 126 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGTLDY 175
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKVQHKN 172
F LG+G FG VY R+ I ++ +++ G+ +++ E + + ++H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
++RL G D LI EY P L + K D I +A L Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGYMSPE 289
R+IHRD+K N+LL + KI+DFG + + A +SR + GT Y+ PE
Sbjct: 131 ---KRVIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRDTLCGTLDYLPPE 180
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSG 315
+ K D++S GVL E + G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P ++ L +K D I +A L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 126
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 127 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 176
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P ++ L +K D I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 125
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 126 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 175
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 115 NTFSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSG--RSEQGLREMKNEASVIAKVQHK 171
T+ +G G +G V + R G+++A+K+LS +SE + E ++ +QH+
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 172 NLVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQIIEGIAQ-- 225
N++ LL + P SL DF+L P + L + ++ E Q
Sbjct: 102 NVIGLLDV------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYL 149
Query: 226 ------GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
GL Y+H ++HRDLK N+ +++D KI DFG+AR A +
Sbjct: 150 VYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGY 201
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++GK
Sbjct: 202 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEI-AVKRL--SGRSEQGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I A+K L + + G+ +++ E + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P + L +K D I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELANALS 127
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 128 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLXGTLDY 177
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 123 LGEGGFGPVYKGVL--RKGDEIAVKRLSGRSEQGL---REMKNEASVIAKVQHKNLVRLL 177
LGEG FG VY+GV KG++I V + + + L + +EA ++ + H ++V+L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G I+++ +I E P L +L + L +T V I + + YL +
Sbjct: 92 GI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAYLES---IN 145
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYALEGIF 296
+HRD+ NIL+ K+ DFG++R I + +A+ +R+ +MSPE F
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRF 203
Query: 297 SIKSDVFSFGVLLLEIVSGKKNTGLY 322
+ SDV+ F V + EI+S K +
Sbjct: 204 TTASDVWMFAVCMWEILSFGKQPFFW 229
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 115 NTFSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSG--RSEQGLREMKNEASVIAKVQHK 171
T+ +G G +G V + R G+++A+K+LS +SE + E ++ +QH+
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 172 NLVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQIIEGIAQ-- 225
N++ LL + P SL DF+L P + L + ++ E Q
Sbjct: 84 NVIGLLDV------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYL 131
Query: 226 ------GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
GL Y+H ++HRDLK N+ +++D KI DFG+AR A +
Sbjct: 132 VYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGY 183
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++GK
Sbjct: 184 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 108 SSVSTATNTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMKNEASVIA 166
SS + F LG+G FG V +++ GD AVK L + + L++ E ++
Sbjct: 16 SSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVL--KKDVILQDDDVECTMTE 73
Query: 167 KV------QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQII 220
K H L +L C D + E++ L F + R + R
Sbjct: 74 KRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAA 131
Query: 221 EGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR--ICGGNELQANTSR 278
E I L++LH II+RDLK N+LLD + + K++DFGM + IC G T+
Sbjct: 132 E-IISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG----VTTAT 183
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
GT Y++PE E ++ D ++ GVLL E++ G
Sbjct: 184 FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH 221
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 42/283 (14%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+G+G FG VY G R E+A++ + +E L+ K E + +H+N+V +G C
Sbjct: 41 IGKGRFGQVYHG--RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
+ +I ++L + D +I+LD QI + I +G+ YLH I+H
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILH 153
Query: 241 RDLKASNILLDKDMNPK--ISDFGMARICGGNELQANTSRIVGTYGY-----------MS 287
+DLK+ N+ D N K I+DFG+ I G + ++ G+ +S
Sbjct: 154 KDLKSKNVFYD---NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLS 210
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTSNRTLELI 346
P+ + + FS SDVF+ G + E+ + ++T + +W + T +
Sbjct: 211 PDTEEDKLPFSKHSDVFALGTIWYELHA---REWPFKTQPAEAI--IWQMGTGMK----- 260
Query: 347 DDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVVSML 389
P L K++ +I L C ++RPT ++ ML
Sbjct: 261 --PNLSQIGMGKEI----SDILLFCWAFEQEERPTFTKLMDML 297
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 123 LGEGGFGPVYKGVL--RKGDEIAVKRLSGRSEQGL---REMKNEASVIAKVQHKNLVRLL 177
LGEG FG VY+GV KG++I V + + + L + +EA ++ + H ++V+L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G I+++ +I E P L +L + L +T V I + + YL +
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAYLES---IN 133
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYALEGIF 296
+HRD+ NIL+ K+ DFG++R I + +A+ +R+ +MSPE F
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRF 191
Query: 297 SIKSDVFSFGVLLLEIVSGKKN 318
+ SDV+ F V + EI+S K
Sbjct: 192 TTASDVWMFAVCMWEILSFGKQ 213
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 107/223 (47%), Gaps = 21/223 (9%)
Query: 121 NKLGEGGFGPV----YKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
++LG+G FG V Y + G +AVK+L R+ + E ++ + +V+
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 176 LLGCCIDKDEKIL--IYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
G + L + EY+P+ L FL R LD + I +G+ YL
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--- 131
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE-----LQANTSRIVGTYGYMSP 288
R +HRDL A NIL++ + + KI+DFG+A++ ++ + S I + +P
Sbjct: 132 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF----WYAP 187
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLG 331
E + IFS +SDV+SFGV+L E+ + + + L ++G
Sbjct: 188 ESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG 230
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 111/215 (51%), Gaps = 23/215 (10%)
Query: 110 VSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEI-AVKR--LSGRSEQ-------GLREMK 159
V + + + LGEG F VYK + ++I A+K+ L RSE LRE+K
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 160 NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQI 219
++ ++ H N++ LL K L++++M L+ + D + + + +
Sbjct: 65 ----LLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYML 119
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
+ QGL YLHQ+ I+HRDLK +N+LLD++ K++DFG+A+ G +A ++
Sbjct: 120 M--TLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN-RAYXHQV 173
Query: 280 VGTYGYMSPEYALEG-IFSIKSDVFSFGVLLLEIV 313
V T Y +PE ++ + D+++ G +L E++
Sbjct: 174 V-TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRL------SGRSEQGLREMKNEASVIAKV 168
+ F ++LG G G V+K + + ++L Q +RE++ V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+V G E + E+M SLD L RI + +V I + +GL
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSI--AVIKGLT 118
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
YL + + +I+HRD+K SNIL++ K+ DFG++ G + + + VGT YMSP
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 172
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGK 316
E +S++SD++S G+ L+E+ G+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRL------SGRSEQGLREMKNEASVIAKV 168
+ F ++LG G G V+K + + ++L Q +RE++ V+ +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 123
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+V G E + E+M SLD L RI + +V I + +GL
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSI--AVIKGLT 180
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
YL + + +I+HRD+K SNIL++ K+ DFG++ G + + + VGT YMSP
Sbjct: 181 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 234
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGK 316
E +S++SD++S G+ L+E+ G+
Sbjct: 235 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEIAV----KRLSGRSEQGLREMKNEASVIAKVQHKN 172
F D LG GGFG V+ ++ ++ + + +G + E ++AKV +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD-----PTKRILLDWVTRVQIIEGIAQGL 227
+V L K + L+ M + + +++ P + QI+ GL
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGL 302
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYM 286
+LHQ + II+RDLK N+LLD D N +ISD G+A + G Q T GT G+M
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG---QTKTKGYAGTPGFM 356
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+PE L + D F+ GV L E+++ +
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 106/201 (52%), Gaps = 19/201 (9%)
Query: 123 LGEGGFGPV-----YKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
LGEG FG V YK + + ++L +S+ +R ++ E S + ++H ++++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHPHIIKLY 75
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
+ +++ EY + D+ + KR+ D R + I + Y H++ +
Sbjct: 76 DVITTPTDIVMVIEYAGGELFDYIV--EKKRMTEDEGRR--FFQQIICAIEYCHRH---K 128
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARI-CGGNELQANTSRIVGTYGYMSPEYALEGIF 296
I+HRDLK N+LLD ++N KI+DFG++ I GN L+ + G+ Y +PE ++
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVINGKLY 184
Query: 297 S-IKSDVFSFGVLLLEIVSGK 316
+ + DV+S G++L ++ G+
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGR 205
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P ++ L +K D I +A L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 119
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 120 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 169
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 18/219 (8%)
Query: 104 LFSFSSVSTATNTFSDTNKLGEGGFGPVY---KGVLRKGDEIAVKRLSGRSEQGLREMKN 160
+F S + + KLG G +G V V I + R + S ++
Sbjct: 26 MFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE 85
Query: 161 EASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT-KRILLDWVTRVQI 219
E +V+ + H N+++L DK L+ E L FD R+ + V I
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL----FDEIIHRMKFNEVDAAVI 141
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANT 276
I+ + G+ YLH+++ I+HRDLK N+LL +KD KI DFG++ + E Q
Sbjct: 142 IKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKM 195
Query: 277 SRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+GT Y++PE L + K DV+S GV+L +++G
Sbjct: 196 KERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEIAV----KRLSGRSEQGLREMKNEASVIAKVQHKN 172
F D LG GGFG V+ ++ ++ + + +G + E ++AKV +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD-----PTKRILLDWVTRVQIIEGIAQGL 227
+V L K + L+ M + + +++ P + QI+ GL
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGL 302
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYM 286
+LHQ + II+RDLK N+LLD D N +ISD G+A + G Q T GT G+M
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG---QTKTKGYAGTPGFM 356
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+PE L + D F+ GV L E+++ +
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEIAV----KRLSGRSEQGLREMKNEASVIAKVQHKN 172
F D LG GGFG V+ ++ ++ + + +G + E ++AKV +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD-----PTKRILLDWVTRVQIIEGIAQGL 227
+V L K + L+ M + + +++ P + QI+ GL
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGL 302
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYM 286
+LHQ + II+RDLK N+LLD D N +ISD G+A + G Q T GT G+M
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG---QTKTKGYAGTPGFM 356
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+PE L + D F+ GV L E+++ +
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRL------SGRSEQGLREMKNEASVIAKV 168
+ F ++LG G G V+K + + ++L Q +RE++ V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+V G E + E+M SLD L RI + +V I + +GL
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSI--AVIKGLT 118
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
YL + + +I+HRD+K SNIL++ K+ DFG++ G + + + VGT YMSP
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 172
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGK 316
E +S++SD++S G+ L+E+ G+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEIAV----KRLSGRSEQGLREMKNEASVIAKVQHKN 172
F D LG GGFG V+ ++ ++ + + +G + E ++AKV +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD-----PTKRILLDWVTRVQIIEGIAQGL 227
+V L K + L+ M + + +++ P + QI+ GL
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV----SGL 302
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYM 286
+LHQ + II+RDLK N+LLD D N +ISD G+A + G Q T GT G+M
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG---QTKTKGYAGTPGFM 356
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+PE L + D F+ GV L E+++ +
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
Y H R+IHRD+K N+LL KI+DFG + C + T + GT Y+ P
Sbjct: 124 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTT--LSGTLDYLPP 176
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGK 316
E + K D++S GVL E + GK
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRL------SGRSEQGLREMKNEASVIAKV 168
+ F ++LG G G V+K + + ++L Q +RE++ V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+V G E + E+M SLD L RI + +V I + +GL
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSI--AVIKGLT 118
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
YL + + +I+HRD+K SNIL++ K+ DFG++ G + + + VGT YMSP
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 172
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGK 316
E +S++SD++S G+ L+E+ G+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRL------SGRSEQGLREMKNEASVIAKV 168
+ F ++LG G G V+K + + ++L Q +RE++ V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+V G E + E+M SLD L RI + +V I + +GL
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSI--AVIKGLT 118
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
YL + + +I+HRD+K SNIL++ K+ DFG++ G + + + VGT YMSP
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 172
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGK 316
E +S++SD++S G+ L+E+ G+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRL------SGRSEQGLREMKNEASVIAKV 168
+ F ++LG G G V+K + + ++L Q +RE++ V+ +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 61
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+V G E + E+M SLD L RI + +V I + +GL
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSI--AVIKGLT 118
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
YL + + +I+HRD+K SNIL++ K+ DFG++ G + + + VGT YMSP
Sbjct: 119 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 172
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGK 316
E +S++SD++S G+ L+E+ G+
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVKRLSGRSEQGLR-EMKNEASVIAKVQHKN 172
+ F ++LG G G V+K + G +A K + + +R ++ E V+ +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
+V G E + E+M SLD L RI + +V I + +GL YL +
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSI--AVIKGLTYLRE 141
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL 292
+ +I+HRD+K SNIL++ K+ DFG++ G + + + VGT YMSPE
Sbjct: 142 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQ 195
Query: 293 EGIFSIKSDVFSFGVLLLEIVSGKKNTG 320
+S++SD++S G+ L+E+ G+ G
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGRYPIG 223
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEI-AVKRL--SGRSEQGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I A+K L + + G+ +++ E + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 128 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTTLCGTLDY 177
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE K D++S GVL E + GK
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRL------SGRSEQGLREMKNEASVIAKV 168
+ F ++LG G G V+K + + ++L Q +RE++ V+ +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 88
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+V G E + E+M SLD L RI + +V I + +GL
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSI--AVIKGLT 145
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
YL + + +I+HRD+K SNIL++ K+ DFG++ G + + + VGT YMSP
Sbjct: 146 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSP 199
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGK 316
E +S++SD++S G+ L+E+ G+
Sbjct: 200 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 19/208 (9%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRL------SGRSEQGLREMKNEASVIAKV 168
+ F ++LG G G V+K + + ++L Q +RE++ V+ +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHEC 64
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+V G E + E+M SLD L RI + +V I + +GL
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGRIPEQILGKVSI--AVIKGLT 121
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
YL + + +I+HRD+K SNIL++ K+ DFG++ G + + VGT YMSP
Sbjct: 122 YLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDEMANEFVGTRSYMSP 175
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGK 316
E +S++SD++S G+ L+E+ G+
Sbjct: 176 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKVQHKN 172
F LG+G FG VY +K I ++ +S+ +G+ +++ E + A + H N
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
++RL D+ LI EY P L L K D I+E +A L+Y H
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELYKEL---QKSCTFDEQRTATIMEELADALMYCHG 141
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL 292
++IHRD+K N+LL KI+DFG + L+ T + GT Y+ PE
Sbjct: 142 ---KKVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKT--MCGTLDYLPPEMIE 194
Query: 293 EGIFSIKSDVFSFGVLLLEIVSG 315
+ + K D++ GVL E++ G
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVG 217
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI++FG + + A +SR + GT Y
Sbjct: 125 YCHS---KRVIHRDIKPENLLLGSAGELKIANFGWS-------VHAPSSRRTTLCGTLDY 174
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY ++ I ++ +++ G+ +++ E + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H R+IHRD+K N+LL KI++FG + + A +SR + GT Y
Sbjct: 126 YCHS---KRVIHRDIKPENLLLGSAGELKIANFGWS-------VHAPSSRRTTLCGTLDY 175
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 25/211 (11%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLLGC 179
++G+G +G V+ G R G+++AVK E RE + +V+ ++H+N++ +
Sbjct: 43 KQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVL--MRHENILGFIAA 99
Query: 180 CIDKD----EKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ--- 232
I + LI +Y N SL +D K LD + +++ GL +LH
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSL----YDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 233 --YSRVRIIHRDLKASNILLDKDMNPKISDFGMAR--ICGGNELQANTSRIVGTYGYMSP 288
+ I HRDLK+ NIL+ K+ I+D G+A I NE+ + VGT YM P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 289 EYALEGI------FSIKSDVFSFGVLLLEIV 313
E E + I +D++SFG++L E+
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEVA 246
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 114/232 (49%), Gaps = 25/232 (10%)
Query: 106 SFSSVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDE-IAVKRLS-GRSEQGLREMK-NEA 162
S + +T+ + + KLGEG +G VYK + +E +A+KR+ E+G+ E
Sbjct: 25 SAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREV 84
Query: 163 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDP--TKRILLDWVTRVQII 220
S++ ++QH+N++ L LI+EY N + +P + R++ ++ Q+I
Sbjct: 85 SLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFL--YQLI 142
Query: 221 EGIAQGLLYLHQYSRVRIIHRDLKASNILL---DKDMNP--KISDFGMARICGGNELQAN 275
G+ + H SR R +HRDLK N+LL D P KI DFG+AR G ++
Sbjct: 143 NGVN----FCH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR-AFGIPIRQF 194
Query: 276 TSRIVGTYGYMSPEYALEG-IFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS 326
T I+ T Y PE L +S D++S + E++ T L+ DS
Sbjct: 195 THEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML---MKTPLFPGDS 242
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 33/225 (14%)
Query: 112 TATNTFSDTNKLGE----GGFGPVYKGV-LRKGDEIAVKRLSG---RSEQGLREMKNEAS 163
T + SD +LGE GG V+ LR ++AVK L R + EA
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 164 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTR------- 216
A + H +V D E P L + + + + L +
Sbjct: 65 NAAALNHPAIV----AVYDTGEA-----ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 217 ---VQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG--GNE 271
+++I Q L + HQ IIHRD+K +NIL+ K+ DFG+AR GN
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNS 172
Query: 272 LQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ T+ ++GT Y+SPE A +SDV+S G +L E+++G+
Sbjct: 173 VX-QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 112/217 (51%), Gaps = 22/217 (10%)
Query: 111 STATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVKRLSGR----SEQGL--REMKNEAS 163
S + + +LG G F V K + G E A K + R S +G+ E++ E +
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 164 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGI 223
++ +++H N++ L +K + +LI E + L FL + + + D T Q ++ I
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE-KESLTEDEAT--QFLKQI 117
Query: 224 AQGLLYLHQYSRVRIIHRDLKASNI-LLDKDM-NPKIS--DFGMA-RICGGNELQANTSR 278
G+ YLH RI H DLK NI LLDK++ NP+I DFG+A +I GNE +
Sbjct: 118 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK----N 170
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
I GT +++PE +++D++S GV+ ++SG
Sbjct: 171 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKV 168
A F LG+G FG VY + I ++ +++ G+ +++ E + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H N++RL G D LI EY P L + K D I +A L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGY 285
Y H ++IHRD+K N+LL KI+DFG + + A +SR + GT Y
Sbjct: 123 YCHS---KKVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRAALCGTLDY 172
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ PE + K D++S GVL E + GK
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 17/209 (8%)
Query: 123 LGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKNLVRLLG 178
LG G FG V+ R G A+K L L+++++ E +++ V H ++R+ G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
D + +I +Y+ L F L ++R + V + E + L YLH I
Sbjct: 74 TFQDAQQIFMIMDYIEGGEL-FSLLRKSQR-FPNPVAKFYAAE-VCLALEYLHSKD---I 127
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSI 298
I+RDLK NILLDK+ + KI+DFG A+ + T + GT Y++PE ++
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYXLCGTPDYIAPEVVSTKPYNK 182
Query: 299 KSDVFSFGVLLLEIVSGKKNTGLYRTDSL 327
D +SFG+L+ E+++G T Y ++++
Sbjct: 183 SIDWWSFGILIYEMLAGY--TPFYDSNTM 209
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 122 KLGEGGFGPVYKGVLR-KGDEIAVKRLSGRSEQGLREMKN-EASVIAKVQHKNLVRL--- 176
+LG GGFG V + + + G+++A+K+ RE E ++ K+ H N+V
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 177 ---LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
L D +L EY L +L L ++ I+ L YLH+
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 141
Query: 234 SRVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
RIIHRDLK NI+L + + KI D G A+ EL + VGT Y++PE
Sbjct: 142 ---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPEL 195
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
+ +++ D +SFG L E ++G
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 122 KLGEGGFGPVYKGVLR-KGDEIAVKRLSGRSEQGLREMKN-EASVIAKVQHKNLVRL--- 176
+LG GGFG V + + + G+++A+K+ RE E ++ K+ H N+V
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 177 ---LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
L D +L EY L +L L ++ I+ L YLH+
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 234 SRVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
RIIHRDLK NI+L + + KI D G A+ EL + VGT Y++PE
Sbjct: 141 ---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFVGTLQYLAPEL 194
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
+ +++ D +SFG L E ++G
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 27/217 (12%)
Query: 113 ATNTFSDT----NKLGEGGFGPVYKGVLRK-GDEIAVKRLSGR--SEQGLREMKNEASVI 165
A+ FSD +LG+G F V + V + G E A K ++ + S + ++++ EA +
Sbjct: 23 ASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 82
Query: 166 AKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
K+QH N+VRL ++ L+++ + L D R I+ I +
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILE 139
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNELQANTSR---- 278
+ Y H I+HR+LK N+LL K K++DFG+A ++ N S
Sbjct: 140 SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-------IEVNDSEAWHG 189
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
GT GY+SPE + +S D+++ GV+L ++ G
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 109/206 (52%), Gaps = 22/206 (10%)
Query: 122 KLGEGGFGPVYKGVLR-KGDEIAVKRLSGR----SEQGL--REMKNEASVIAKVQHKNLV 174
+LG G F V K + G E A K + R S +G+ E++ E +++ +++H N++
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYS 234
L +K + +LI E + L FL + + + D T Q ++ I G+ YLH
Sbjct: 79 TLHDIFENKTDVVLILELVSGGELFDFLAE-KESLTEDEAT--QFLKQILDGVHYLHSK- 134
Query: 235 RVRIIHRDLKASNI-LLDKDM-NPKIS--DFGMA-RICGGNELQANTSRIVGTYGYMSPE 289
RI H DLK NI LLDK++ NP+I DFG+A +I GNE + I GT +++PE
Sbjct: 135 --RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK----NIFGTPEFVAPE 188
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSG 315
+++D++S GV+ ++SG
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 26/241 (10%)
Query: 111 STATNTFSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKNEASV----- 164
S AT+ + ++G G +G VYK G +A+K + + G ++V
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 165 ---IAKVQHKNLVRLLGCC----IDKDEKI-LIYEYMPNKSLDFFLFDPTKRILLDWVTR 216
+ +H N+VRL+ C D++ K+ L++E++ ++ L +L D L T
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETI 122
Query: 217 VQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANT 276
++ +GL +LH I+HRDLK NIL+ K++DFG+ARI Q
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMAL 176
Query: 277 SRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDS-LNLLGYVWD 335
+ +V T Y +PE L+ ++ D++S G + E+ K L+ +S + LG ++D
Sbjct: 177 TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP---LFCGNSEADQLGKIFD 233
Query: 336 L 336
L
Sbjct: 234 L 234
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 33/225 (14%)
Query: 112 TATNTFSDTNKLGE----GGFGPVYKGV-LRKGDEIAVKRLSG---RSEQGLREMKNEAS 163
T + SD +LGE GG V+ LR ++AVK L R + EA
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 164 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTR------- 216
A + H +V D E P L + + + + L +
Sbjct: 65 NAAALNHPAIV----AVYDTGEA-----ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 217 ---VQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG--GNE 271
+++I Q L + HQ IIHRD+K +NI++ K+ DFG+AR GN
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 272 LQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ T+ ++GT Y+SPE A +SDV+S G +L E+++G+
Sbjct: 173 VT-QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLRKGDE-IAVKRLSGRSEQGLR-EMKNEASVIAKVQHKNL 173
T+ +KLGEG + VYKG + D +A+K + E+G E S++ ++H N+
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V L + L++EY+ +K L +L D I + V + + +GL Y H
Sbjct: 63 VTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKL--FLFQLLRGLAYCH-- 117
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANT-SRIVGTYGYMSPEYAL 292
R +++HRDLK N+L+++ K++DFG+AR + T V T Y P+ L
Sbjct: 118 -RQKVLHRDLKPQNLLINERGELKLADFGLAR---AKSIPTKTYDNEVVTLWYRPPDILL 173
Query: 293 EGI-FSIKSDVFSFGVLLLEIVSGK 316
+S + D++ G + E+ +G+
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 112/217 (51%), Gaps = 22/217 (10%)
Query: 111 STATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVKRLSGR----SEQGL--REMKNEAS 163
S + + +LG G F V K + G E A K + R S +G+ E++ E +
Sbjct: 22 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVN 81
Query: 164 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGI 223
++ +++H N++ L +K + +LI E + L FL + + + D T Q ++ I
Sbjct: 82 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE-KESLTEDEAT--QFLKQI 138
Query: 224 AQGLLYLHQYSRVRIIHRDLKASNI-LLDKDM-NPKIS--DFGMA-RICGGNELQANTSR 278
G+ YLH RI H DLK NI LLDK++ NP+I DFG+A +I GNE +
Sbjct: 139 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK----N 191
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
I GT +++PE +++D++S GV+ ++SG
Sbjct: 192 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 33/225 (14%)
Query: 112 TATNTFSDTNKLGE----GGFGPVYKGV-LRKGDEIAVKRLSG---RSEQGLREMKNEAS 163
T + SD +LGE GG V+ LR ++AVK L R + EA
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 164 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTR------- 216
A + H +V D E P L + + + + L +
Sbjct: 65 NAAALNHPAIV----AVYDTGEA-----ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 217 ---VQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG--GNE 271
+++I Q L + HQ IIHRD+K +NI++ K+ DFG+AR GN
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 272 LQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ T+ ++GT Y+SPE A +SDV+S G +L E+++G+
Sbjct: 173 VT-QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 36/228 (15%)
Query: 115 NTFSDTNKLGEGGFGPVYKGV---LRKGDE---IAVKRLSGRSEQGLRE-MKNEASVIAK 167
N S LG G FG V + L K D +AVK L + RE + +E V++
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 168 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSL--------DFFLFDPTKRILLDWVTRVQ 218
+ H N+V LLG C ++I EY L D F+ T +++
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 219 IIEG-------IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE 271
+E +A+G+ +L + IHRDL A NILL KI DFG+AR +
Sbjct: 159 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-----D 210
Query: 272 LQANTSRIVGTYG-----YMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
++ +++ +V +M+PE +++ +SDV+S+G+ L E+ S
Sbjct: 211 IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 36/228 (15%)
Query: 115 NTFSDTNKLGEGGFGPVYKGV---LRKGDE---IAVKRLSGRSEQGLRE-MKNEASVIAK 167
N S LG G FG V + L K D +AVK L + RE + +E V++
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 168 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSL--------DFFLFDPTKRILLDWVTRVQ 218
+ H N+V LLG C ++I EY L D F+ T +++
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 219 IIEG-------IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE 271
+E +A+G+ +L + IHRDL A NILL KI DFG+AR +
Sbjct: 143 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-----D 194
Query: 272 LQANTSRIVGTYG-----YMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
++ +++ +V +M+PE +++ +SDV+S+G+ L E+ S
Sbjct: 195 IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 33/225 (14%)
Query: 112 TATNTFSDTNKLGE----GGFGPVYKGV-LRKGDEIAVKRLSG---RSEQGLREMKNEAS 163
T + SD +LGE GG V+ LR ++AVK L R + EA
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 164 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTR------- 216
A + H +V D E P L + + + + L +
Sbjct: 65 NAAALNHPAIV----AVYDTGEA-----ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 217 ---VQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG--GNE 271
+++I Q L + HQ IIHRD+K +NI++ K+ DFG+AR GN
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 272 LQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ T+ ++GT Y+SPE A +SDV+S G +L E+++G+
Sbjct: 173 VT-QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 114 TNTFSDT----NKLGEGGFGPVYKGVLRK-GDEIAVKRLSGR--SEQGLREMKNEASVIA 166
+ FSD +LG+G F V + V + G E A K ++ + S + ++++ EA +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 167 KVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQG 226
K+QH N+VRL ++ L+++ + L D R I+ I +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILES 117
Query: 227 LLYLHQYSRVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNELQANTSR----I 279
+ Y H I+HR+LK N+LL K K++DFG+A ++ N S
Sbjct: 118 IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-------IEVNDSEAWHGF 167
Query: 280 VGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
GT GY+SPE + +S D+++ GV+L ++ G
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 36/228 (15%)
Query: 115 NTFSDTNKLGEGGFGPVYKGV---LRKGDE---IAVKRLSGRSEQGLRE-MKNEASVIAK 167
N S LG G FG V + L K D +AVK L + RE + +E V++
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 168 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSL--------DFFLFDPTKRILLDWVTRVQ 218
+ H N+V LLG C ++I EY L D F+ T +++
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 219 IIEG-------IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE 271
+E +A+G+ +L + IHRDL A NILL KI DFG+AR +
Sbjct: 161 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-----D 212
Query: 272 LQANTSRIVGTYG-----YMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
++ +++ +V +M+PE +++ +SDV+S+G+ L E+ S
Sbjct: 213 IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 100/233 (42%), Gaps = 33/233 (14%)
Query: 104 LFSFSSVSTATNTFSDTNKLGE----GGFGPVYKGV-LRKGDEIAVKRLSG---RSEQGL 155
L S T + SD +LGE GG V+ LR ++AVK L R
Sbjct: 14 LVPRGSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFY 73
Query: 156 REMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVT 215
+ EA A + H +V D E P L + + + + L +
Sbjct: 74 LRFRREAQNAAALNHPAIV----AVYDTGEA-----ETPAGPLPYIVMEYVDGVTLRDIV 124
Query: 216 R----------VQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR 265
+++I Q L + HQ IIHRD+K +NI++ K+ DFG+AR
Sbjct: 125 HTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR 181
Query: 266 ICG--GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
GN + T+ ++GT Y+SPE A +SDV+S G +L E+++G+
Sbjct: 182 AIADSGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 114 TNTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGR--SEQGLREMKNEASVIAKVQH 170
++ + +LG+G F V + V + G E A K ++ + S + ++++ EA + K+QH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
N+VRL ++ L+++ + L D R I+ I + + Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 231 HQYSRVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNELQANTSR----IVGTY 283
H I+HR+LK N+LL K K++DFG+A ++ N S GT
Sbjct: 121 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-------IEVNDSEAWHGFAGTP 170
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
GY+SPE + +S D+++ GV+L ++ G
Sbjct: 171 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 114 TNTFSDT----NKLGEGGFGPVYKGVLRK-GDEIAVKRLSGR--SEQGLREMKNEASVIA 166
+ FSD +LG+G F V + V + G E A K ++ + S + ++++ EA +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 167 KVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQG 226
K+QH N+VRL ++ L+++ + L D R I+ I +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILES 117
Query: 227 LLYLHQYSRVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNELQANTSR----I 279
+ Y H I+HR+LK N+LL K K++DFG+A ++ N S
Sbjct: 118 IAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-------IEVNDSEAWHGF 167
Query: 280 VGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
GT GY+SPE + +S D+++ GV+L ++ G
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 107/200 (53%), Gaps = 16/200 (8%)
Query: 123 LGEGGFGPVY--KGVLR--KGDEIAVKRLSGRSEQGLRE---MKNEASVIAKVQHKNLVR 175
LG+G FG V+ + V R G A+K L ++ +R+ K E ++A V H +V+
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLK-KATLKVRDRVRTKMERDILADVNHPFVVK 94
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
L + + LI +++ + D F + + + + + E +A GL +LH
Sbjct: 95 LHYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYLAE-LALGLDHLHS--- 148
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
+ II+RDLK NILLD++ + K++DFG+++ +E +A + GT YM+PE
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYMAPEVVNRQG 206
Query: 296 FSIKSDVFSFGVLLLEIVSG 315
S +D +S+GVL+ E+++G
Sbjct: 207 HSHSADWWSYGVLMFEMLTG 226
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 217 VQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG--GNELQA 274
+++I Q L + HQ IIHRD+K +NI++ K+ DFG+AR GN +
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT- 174
Query: 275 NTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
T+ ++GT Y+SPE A +SDV+S G +L E+++G+
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 115 NTFSDTNKLGEGGFGPVYKGV---LRKGDE---IAVKRLSGRSEQGLRE-MKNEASVIAK 167
N S LG G FG V + L K D +AVK L + RE + +E V++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 168 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSL--------DFFLFDPTKRILLDWVTRVQ 218
+ H N+V LLG C ++I EY L D F+ T +++
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 219 IIEG-------IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG--G 269
+E +A+G+ +L + IHRDL A NILL KI DFG+AR
Sbjct: 166 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDS 222
Query: 270 NELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
N + +R+ +M+PE +++ +SDV+S+G+ L E+ S
Sbjct: 223 NYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 29/223 (13%)
Query: 111 STATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQG-LREMKNEASVIAKVQ 169
ST T +G+G FG V++G R G+E+AVK S R E+ RE + +V+ ++
Sbjct: 5 STIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LR 61
Query: 170 HKNLVRLLGCCIDKDEKI-----LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIA 224
H+N++ + +KD L+ +Y + SL FD R + +++ A
Sbjct: 62 HENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTA 116
Query: 225 QGLLYLHQ-----YSRVRIIHRDLKASNILLDKDMNPKISDFGMA--RICGGNELQANTS 277
GL +LH + I HRDLK+ NIL+ K+ I+D G+A + + +
Sbjct: 117 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPN 176
Query: 278 RIVGTYGYMSPEYALEGIFSIK-------SDVFSFGVLLLEIV 313
VGT YM+PE L+ ++K +D+++ G++ EI
Sbjct: 177 HRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 36/228 (15%)
Query: 115 NTFSDTNKLGEGGFGPVYKGV---LRKGDE---IAVKRLSGRSEQGLRE-MKNEASVIAK 167
N S LG G FG V + L K D +AVK L + RE + +E V++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 168 V-QHKNLVRLLGCCIDKDEKILIYEYMPNKSL--------DFFLFDPTKRILLDWVTRVQ 218
+ H N+V LLG C ++I EY L D F+ T +++
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 219 IIEG-------IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE 271
+E +A+G+ +L + IHRDL A NILL KI DFG+AR +
Sbjct: 166 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-----D 217
Query: 272 LQANTSRIVGTYG-----YMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
++ +++ +V +M+PE +++ +SDV+S+G+ L E+ S
Sbjct: 218 IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 121 NKLGEGGFGPVYKGVLR----KGDEIAVKRLSG---RSEQGLREMKNEASVIAKVQHKNL 173
KLG+G FG V +G K +AVK L + + + E + + + H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
+RL G + K ++ E P SL L LL ++R + +A+G+ YL
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 134
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQ--ANTSRIVGTYGYMSPEYA 291
R IHRDL A N+LL KI DFG+ R N+ R V + + +PE
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 190
Query: 292 LEGIFSIKSDVFSFGVLLLEIVS 314
FS SD + FGV L E+ +
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 19/208 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNL 173
+ D +G G +G V V R G ++A+K+L +SE + E ++ ++H+N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 174 VRLLGCCIDK---DEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQ-IIEGIAQGLLY 229
+ LL D+ Y MP D +++ D R+Q ++ + +GL Y
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGED---RIQFLVYQMLKGLRY 143
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
+H IIHRDLK N+ +++D KI DFG+AR + + V T Y +PE
Sbjct: 144 IHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAPE 195
Query: 290 YALEGI-FSIKSDVFSFGVLLLEIVSGK 316
L + ++ D++S G ++ E+++GK
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 105/209 (50%), Gaps = 25/209 (11%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLLGCCI 181
+G+G +G V++G L G+ +AVK S R EQ RE + +V+ ++H N++ + +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVL--LRHDNILGFIASDM 72
Query: 182 ----DKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLH-----Q 232
+ LI Y + SL FL +R L+ +++ A GL +LH
Sbjct: 73 TSRNSSTQLWLITHYHEHGSLYDFL----QRQTLEPHLALRLAVSAACGLAHLHVEIFGT 128
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARIC--GGNELQANTSRIVGTYGYMSPEY 290
+ I HRD K+ N+L+ ++ I+D G+A + G + L + VGT YM+PE
Sbjct: 129 QGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEV 188
Query: 291 ALEGIF-----SIK-SDVFSFGVLLLEIV 313
E I S K +D+++FG++L EI
Sbjct: 189 LDEQIRTDCFESYKWTDIWAFGLVLWEIA 217
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 121 NKLGEGGFGPVYKGVLR----KGDEIAVKRLSG---RSEQGLREMKNEASVIAKVQHKNL 173
KLG+G FG V +G K +AVK L + + + E + + + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
+RL G + K ++ E P SL L LL ++R + +A+G+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 130
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYA 291
R IHRDL A N+LL KI DFG+ R N+ R V + + +PE
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESL 186
Query: 292 LEGIFSIKSDVFSFGVLLLEIVS 314
FS SD + FGV L E+ +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 20/213 (9%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGV-LRKGDEIAVK-----RLSGRSEQGLREMKNEASVI 165
+ T+ + +G+G F V + V L G E A K +LS R Q L + EA +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKL---EREARIC 57
Query: 166 AKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
++H N+VRL ++ L+++ + L D R I+ I +
Sbjct: 58 RLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILE 114
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNELQANTSRIVGT 282
+L+ HQ ++HRDLK N+LL K K++DFG+A G+ Q GT
Sbjct: 115 AVLHCHQMG---VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD--QQAWFGFAGT 169
Query: 283 YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
GY+SPE + + D+++ GV+L ++ G
Sbjct: 170 PGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 27/204 (13%)
Query: 123 LGEGGFGPV--YKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
+G+G F V + +L G E+AVK + + + L+++ E ++ + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
+ L+ EY + +L + + + R + + I + Y HQ I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQ-IVSAVQYCHQKF---I 134
Query: 239 IHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYALEGIFS 297
+HRDLKA N+LLD DMN KI+DFG + GN+L A +P YA +F
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCG---------APPYAAPELFQ 185
Query: 298 IKS------DVFSFGVLLLEIVSG 315
K DV+S GV+L +VSG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 33/207 (15%)
Query: 123 LGEGGFGPV--YKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
+G+G F V + +L G E+AVK + + + L+++ E ++ + H N+V+L
Sbjct: 15 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 73
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQI---IEGIAQGLLYLHQYSR 235
+ L+ EY + +L + W+ + I + Y HQ
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYL------VAHGWMKEKEARAKFRQIVSAVQYCHQKF- 126
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYALEG 294
I+HRDLKA N+LLD DMN KI+DFG + GN+L SP YA
Sbjct: 127 --IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---------SPPYAAPE 175
Query: 295 IFSIKS------DVFSFGVLLLEIVSG 315
+F K DV+S GV+L +VSG
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 14/200 (7%)
Query: 121 NKLGEGGFGPVYKGVLR-KGDEIAVK---RLSGRSEQGLREMKNEASVIAKVQHKNLVRL 176
+ LG G FG V G G ++AVK R RS + +++ E + +H ++++L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 177 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRV 236
+ ++ EY+ L ++ K LD ++ + I G+ Y H++
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI---CKNGRLDEKESRRLFQQILSGVDYCHRHM-- 136
Query: 237 RIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIF 296
++HRDLK N+LLD MN KI+DFG++ + E + G+ Y +PE ++
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS---CGSPNYAAPEVISGRLY 192
Query: 297 S-IKSDVFSFGVLLLEIVSG 315
+ + D++S GV+L ++ G
Sbjct: 193 AGPEVDIWSSGVILYALLCG 212
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 121 NKLGEGGFGPVYKGVLR----KGDEIAVKRLSG---RSEQGLREMKNEASVIAKVQHKNL 173
KLG+G FG V +G K +AVK L + + + E + + + H+NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
+RL G + K ++ E P SL L LL ++R + +A+G+ YL
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 140
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQA--NTSRIVGTYGYMSPEYA 291
R IHRDL A N+LL KI DFG+ R N+ R V + + +PE
Sbjct: 141 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESL 196
Query: 292 LEGIFSIKSDVFSFGVLLLEIVS 314
FS SD + FGV L E+ +
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 25/207 (12%)
Query: 126 GGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKD- 184
G FG V+K L D +AVK + +Q + + E ++H+NL++ +
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 185 ---EKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ--------Y 233
E LI + SL +L K ++ W + E +++GL YLH+
Sbjct: 84 LEVELWLITAFHDKGSLTDYL----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
+ I HRD K+ N+LL D+ ++DFG+A + +T VGT YM+PE LE
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLE 198
Query: 294 GIFSIKSDVF------SFGVLLLEIVS 314
G + + D F + G++L E+VS
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 121 NKLGEGGFGPVYKGVLR----KGDEIAVKRLSG---RSEQGLREMKNEASVIAKVQHKNL 173
KLG+G FG V +G K +AVK L + + + E + + + H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
+RL G + K ++ E P SL L LL ++R + +A+G+ YL
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 134
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQ--ANTSRIVGTYGYMSPEYA 291
R IHRDL A N+LL KI DFG+ R N+ R V + + +PE
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 190
Query: 292 LEGIFSIKSDVFSFGVLLLEIVS 314
FS SD + FGV L E+ +
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 121 NKLGEGGFGPVYKGVLR----KGDEIAVKRLSG---RSEQGLREMKNEASVIAKVQHKNL 173
KLG+G FG V +G K +AVK L + + + E + + + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
+RL G + K ++ E P SL L LL ++R + +A+G+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 130
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQ--ANTSRIVGTYGYMSPEYA 291
R IHRDL A N+LL KI DFG+ R N+ R V + + +PE
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 186
Query: 292 LEGIFSIKSDVFSFGVLLLEIVS 314
FS SD + FGV L E+ +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRS----EQGLREMKNEASVIAKVQHKNLVRLLG 178
LG+GGF ++ E+ ++ +S +M E S+ + H+++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
D D ++ E +SL ++ L + R + + I G YLH R R+
Sbjct: 89 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 142
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSI 298
IHRDLK N+ L++D+ KI DFG+A + + T + GT Y++PE + S
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 200
Query: 299 KSDVFSFGVLLLEIVSGK 316
+ DV+S G ++ ++ GK
Sbjct: 201 EVDVWSIGCIMYTLLVGK 218
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 121 NKLGEGGFGPVYKGVLR----KGDEIAVKRLSG---RSEQGLREMKNEASVIAKVQHKNL 173
KLG+G FG V +G K +AVK L + + + E + + + H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
+RL G + K ++ E P SL L LL ++R + +A+G+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 130
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQ--ANTSRIVGTYGYMSPEYA 291
R IHRDL A N+LL KI DFG+ R N+ R V + + +PE
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 186
Query: 292 LEGIFSIKSDVFSFGVLLLEIVS 314
FS SD + FGV L E+ +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 117 FSDT-NKLGEGGFGPVYK-----GVLRKGDEIAVKRLSGRSEQGL--REMKNEASVIAKV 168
+ DT +LG G F V K L+ + KR + S +G+ +++ E S++ ++
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
QH N++ L +K + ILI E + L FL ++ L + ++ I G+
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVY 128
Query: 229 YLHQYSRVRIIHRDLKASNI-LLDKDM-NP--KISDFGMA-RICGGNELQANTSRIVGTY 283
YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE + I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTP 181
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+++PE +++D++S GV+ ++SG
Sbjct: 182 AFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+++ +G G FG V++ L + DE+A+K++ Q R E ++ V+H N+V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVL----QDKRFKNRELQIMRIVKHPNVVD 96
Query: 176 LLGCCI---DKDEKI---LIYEYMPN----KSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
L DK +++ L+ EY+P S + T +LL + Q++ +A
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA- 155
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYG 284
Y+H + I HRD+K N+LLD K+ DFG A+I E N S I Y
Sbjct: 156 ---YIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE--PNVSXICSRY- 206
Query: 285 YMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
Y +PE ++ D++S G ++ E++ G+
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 33/280 (11%)
Query: 119 DTNKLGEGGFGPVYKGVLRKGDEI-AVKRL-SGRSEQGLREMKNEASVIAKVQH-KNLVR 175
D ++G G +G V K V + +I AVKR+ S E+ +++ + V+ + +V+
Sbjct: 26 DLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQ 85
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL--HQY 233
G + + + E M S F F +LD V +I+ I + H
Sbjct: 86 FYGALFREGDCWICMELM---STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK 142
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE---- 289
++IIHRD+K SNILLD+ N K+ DFG I G +R G YM+PE
Sbjct: 143 ENLKIIHRDIKPSNILLDRSGNIKLCDFG---ISGQLVDSIAKTRDAGCRPYMAPERIDP 199
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTS---NRTLELI 346
A + ++SDV+S G+ L E+ +G+ + + W S T +
Sbjct: 200 SASRQGYDVRSDVWSLGITLYELATGR---------------FPYPKWNSVFDQLTQVVK 244
Query: 347 DDPVLEDEYSSKQVLLRYVNIALLCVQESADDRPTMNDVV 386
DP ++ ++N LC+ + RP +++
Sbjct: 245 GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRS----EQGLREMKNEASVIAKVQHKNLVRLLG 178
LG+GGF ++ E+ ++ +S +M E S+ + H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
D D ++ E +SL ++ L + R + + I G YLH R R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 138
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSI 298
IHRDLK N+ L++D+ KI DFG+A + + T + GT Y++PE + S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 196
Query: 299 KSDVFSFGVLLLEIVSGK 316
+ DV+S G ++ ++ GK
Sbjct: 197 EVDVWSIGCIMYTLLVGK 214
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 121 NKLGEGGFGPVYKGVLR----KGDEIAVKRLSG---RSEQGLREMKNEASVIAKVQHKNL 173
KLG+G FG V +G K +AVK L + + + E + + + H+NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
+RL G + K ++ E P SL L LL ++R + +A+G+ YL
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 140
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQ--ANTSRIVGTYGYMSPEYA 291
R IHRDL A N+LL KI DFG+ R N+ R V + + +PE
Sbjct: 141 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPESL 196
Query: 292 LEGIFSIKSDVFSFGVLLLEIVS 314
FS SD + FGV L E+ +
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRS----EQGLREMKNEASVIAKVQHKNLVRLLG 178
LG+GGF ++ E+ ++ +S +M E S+ + H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
D D ++ E +SL ++ L + R + + I G YLH R R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 138
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSI 298
IHRDLK N+ L++D+ KI DFG+A + + T + GT Y++PE + S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 196
Query: 299 KSDVFSFGVLLLEIVSGK 316
+ DV+S G ++ ++ GK
Sbjct: 197 EVDVWSIGCIMYTLLVGK 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 123 LGEGGFGPV--YKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
+G+G F V + +L G E+AVK + + + L+++ E ++ + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
+ L+ EY + +L + + + R + + I + Y HQ I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQ-IVSAVQYCHQKF---I 134
Query: 239 IHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYALEGIFS 297
+HRDLKA N+LLD DMN KI+DFG + GN+L SP YA +F
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---------SPPYAAPELFQ 185
Query: 298 IKS------DVFSFGVLLLEIVSG 315
K DV+S GV+L +VSG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 126/280 (45%), Gaps = 26/280 (9%)
Query: 109 SVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKV 168
++ N FS +G GGFG VY RK D + + ++ ++ + E + +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYG--CRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 169 QHKNLVRLLGC----CID-----KDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQI 219
+LV C C+ D+ I + M L + L + + R
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYA 298
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
E I GL ++H +++RDLK +NILLD+ + +ISD G+A C ++ + + S
Sbjct: 299 AE-IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS-- 350
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWT 338
VGT+GYM+PE +G+ + +D FS G +L +++ G ++T + + D T
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI----DRMT 406
Query: 339 SNRTLELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADD 378
+EL D E + +L R VN L C+ A +
Sbjct: 407 LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 446
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 43/233 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
+F SV +TF+ + +G G G V Y +L + +A+K+LS +++
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTH 66
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP- 205
+ E ++ V HKN++ LL + P KSL+ F L D
Sbjct: 67 AKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 206 ---TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG 171
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+AR G + + T +V Y Y +PE L + D++S GV++ E++ G
Sbjct: 172 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 121 NKLGEGGFGPVYKGV-LRKGDEIAVK-----RLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+LG+G F V + V + G E A K +LS R Q +++ EA + ++H N+V
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ---KLEREARICRLLKHPNIV 84
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYS 234
RL ++ LI++ + L D R I+ I + +L+ HQ
Sbjct: 85 RLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ-- 139
Query: 235 RVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 291
+ ++HRDLK N+LL K K++DFG+A G Q GT GY+SPE
Sbjct: 140 -MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGE--QQAWFGFAGTPGYLSPEVL 196
Query: 292 LEGIFSIKSDVFSFGVLLLEIVSG 315
+ + D+++ GV+L ++ G
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVG 220
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 123 LGEGGFGPV--YKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
+G+G F V + +L G E+AVK + + + L+++ E ++ + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
+ L+ EY + +L + + + R + + I + Y HQ I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQ-IVSAVQYCHQKF---I 134
Query: 239 IHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYALEGIFS 297
+HRDLKA N+LLD DMN KI+DFG + GN+L SP YA +F
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---------SPPYAAPELFQ 185
Query: 298 IKS------DVFSFGVLLLEIVSG 315
K DV+S GV+L +VSG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 126/280 (45%), Gaps = 26/280 (9%)
Query: 109 SVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKV 168
++ N FS +G GGFG VY RK D + + ++ ++ + E + +
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYG--CRKADTGKMYAMKCLDKKRIKMKQGETLALNER 239
Query: 169 QHKNLVRLLGC----CID-----KDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQI 219
+LV C C+ D+ I + M L + L + + R
Sbjct: 240 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYA 297
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
E I GL ++H +++RDLK +NILLD+ + +ISD G+A C ++ + + S
Sbjct: 298 AE-IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS-- 349
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWT 338
VGT+GYM+PE +G+ + +D FS G +L +++ G ++T + + D T
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI----DRMT 405
Query: 339 SNRTLELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADD 378
+EL D E + +L R VN L C+ A +
Sbjct: 406 LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 445
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 29/222 (13%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQG-LREMKNEASVIAKVQH 170
T T +G+G FG V++G R G+E+AVK S R E+ RE + +V+ ++H
Sbjct: 39 TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRH 95
Query: 171 KNLVRLLGCCIDKDEKI-----LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
+N++ + +KD L+ +Y + SL FD R + +++ A
Sbjct: 96 ENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTAS 150
Query: 226 GLLYLHQ-----YSRVRIIHRDLKASNILLDKDMNPKISDFGMA--RICGGNELQANTSR 278
GL +LH + I HRDLK+ NIL+ K+ I+D G+A + + +
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 210
Query: 279 IVGTYGYMSPEYALEGIFSIK-------SDVFSFGVLLLEIV 313
VGT YM+PE L+ ++K +D+++ G++ EI
Sbjct: 211 RVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 43/233 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
+F SV +TF+ + +G G G V Y +L + +A+K+LS +++
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTH 66
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP- 205
+ E ++ V HKN++ LL + P KSL+ F L D
Sbjct: 67 AKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 206 ---TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG 171
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+AR G + + T +V Y Y +PE L + D++S GV++ E++ G
Sbjct: 172 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRS----EQGLREMKNEASVIAKVQHKNLVRLLG 178
LG+GGF ++ E+ ++ +S +M E S+ + H+++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
D D ++ E +SL ++ L + R + + I G YLH R R+
Sbjct: 107 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 160
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYALEGI 295
IHRDLK N+ L++D+ KI DFG+A +++ + R + GT Y++PE +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKVLCGTPNYIAPEVLSKKG 215
Query: 296 FSIKSDVFSFGVLLLEIVSGK 316
S + DV+S G ++ ++ GK
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGK 236
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 29/222 (13%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQG-LREMKNEASVIAKVQH 170
T T +G+G FG V++G R G+E+AVK S R E+ RE + +V+ ++H
Sbjct: 1 TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRH 57
Query: 171 KNLVRLLGCCIDKDEKI-----LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
+N++ + +KD L+ +Y + SL FD R + +++ A
Sbjct: 58 ENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTAS 112
Query: 226 GLLYLHQ-----YSRVRIIHRDLKASNILLDKDMNPKISDFGMA--RICGGNELQANTSR 278
GL +LH + I HRDLK+ NIL+ K+ I+D G+A + + +
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 172
Query: 279 IVGTYGYMSPEYALEGIFSIK-------SDVFSFGVLLLEIV 313
VGT YM+PE L+ ++K +D+++ G++ EI
Sbjct: 173 RVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 29/222 (13%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQG-LREMKNEASVIAKVQH 170
T T +G+G FG V++G R G+E+AVK S R E+ RE + +V+ ++H
Sbjct: 26 TIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRH 82
Query: 171 KNLVRLLGCCIDKDEKI-----LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
+N++ + +KD L+ +Y + SL FD R + +++ A
Sbjct: 83 ENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTAS 137
Query: 226 GLLYLHQ-----YSRVRIIHRDLKASNILLDKDMNPKISDFGMA--RICGGNELQANTSR 278
GL +LH + I HRDLK+ NIL+ K+ I+D G+A + + +
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 197
Query: 279 IVGTYGYMSPEYALEGIFSIK-------SDVFSFGVLLLEIV 313
VGT YM+PE L+ ++K +D+++ G++ EI
Sbjct: 198 RVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRS----EQGLREMKNEASVIAKVQHKNLVRLLG 178
LG+GGF ++ E+ ++ +S +M E S+ + H+++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
D D ++ E +SL ++ L + R + + I G YLH R R+
Sbjct: 109 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 162
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYALEGI 295
IHRDLK N+ L++D+ KI DFG+A +++ + R + GT Y++PE +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKVLCGTPNYIAPEVLSKKG 217
Query: 296 FSIKSDVFSFGVLLLEIVSGK 316
S + DV+S G ++ ++ GK
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGK 238
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 126/280 (45%), Gaps = 26/280 (9%)
Query: 109 SVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKV 168
++ N FS +G GGFG VY RK D + + ++ ++ + E + +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYG--CRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 169 QHKNLVRLLGC----CID-----KDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQI 219
+LV C C+ D+ I + M L + L + + R
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYA 298
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
E I GL ++H +++RDLK +NILLD+ + +ISD G+A C ++ + + S
Sbjct: 299 AE-IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS-- 350
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWT 338
VGT+GYM+PE +G+ + +D FS G +L +++ G ++T + + D T
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI----DRMT 406
Query: 339 SNRTLELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADD 378
+EL D E + +L R VN L C+ A +
Sbjct: 407 LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 446
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 126/280 (45%), Gaps = 26/280 (9%)
Query: 109 SVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKV 168
++ N FS +G GGFG VY RK D + + ++ ++ + E + +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYG--CRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 169 QHKNLVRLLGC----CID-----KDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQI 219
+LV C C+ D+ I + M L + L + + R
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYA 298
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
E I GL ++H +++RDLK +NILLD+ + +ISD G+A C ++ + + S
Sbjct: 299 AE-IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS-- 350
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWT 338
VGT+GYM+PE +G+ + +D FS G +L +++ G ++T + + D T
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI----DRMT 406
Query: 339 SNRTLELIDDPVLEDEYSSKQVLLRYVNIALLCVQESADD 378
+EL D E + +L R VN L C+ A +
Sbjct: 407 LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 446
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 41/232 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + +G G +G V ++ G +IAVK+LS R Q + K E ++ ++H+N
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 111
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P SL D +L L+ + + Q +
Sbjct: 112 VIGLLDV------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 159
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 160 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 211
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLL 330
V T Y +PE L + +++ D++S G ++ E+++G+ T TD +N L
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR--TLFPGTDHINQL 261
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 108 SSVSTATN------TFSDTNKLGEGGFGPV--YKGVLRKGDEIAVKRL--SGRSEQGLRE 157
+S+++AT+ + +G+G F V + VL G E+AVK + + + L++
Sbjct: 2 NSITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVL-TGREVAVKIIDKTQLNPTSLQK 60
Query: 158 MKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV 217
+ E ++ + H N+V+L + L+ EY + +L + + + R
Sbjct: 61 LFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARA 118
Query: 218 QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANT 276
+ + I + Y HQ I+HRDLKA N+LLD DMN KI+DFG + GN+L
Sbjct: 119 KFRQ-IVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC 174
Query: 277 SRIVGTYGYMSPEYALEGIFSIKS------DVFSFGVLLLEIVSG 315
SP YA +F K DV+S GV+L +VSG
Sbjct: 175 G---------SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRS----EQGLREMKNEASVIAKVQHKNLVRLLG 178
LG+GGF ++ E+ ++ +S +M E S+ + H+++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
D D ++ E +SL ++ L + R + + I G YLH R R+
Sbjct: 83 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQ-IVLGCQYLH---RNRV 136
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYALEGI 295
IHRDLK N+ L++D+ KI DFG+A +++ + R + GT Y++PE +
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKVLCGTPNYIAPEVLSKKG 191
Query: 296 FSIKSDVFSFGVLLLEIVSGK 316
S + DV+S G ++ ++ GK
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGK 212
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 107/223 (47%), Gaps = 29/223 (13%)
Query: 111 STATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQG-LREMKNEASVIAKVQ 169
T T +G+G FG V++G R G+E+AVK S R E+ RE + +V+ ++
Sbjct: 2 GTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LR 58
Query: 170 HKNLVRLLGCCIDKDEKI-----LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIA 224
H+N++ + +KD L+ +Y + SL FD R + +++ A
Sbjct: 59 HENILGFIAA-DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTA 113
Query: 225 QGLLYLHQ-----YSRVRIIHRDLKASNILLDKDMNPKISDFGMA--RICGGNELQANTS 277
GL +LH + I HRDLK+ NIL+ K+ I+D G+A + + +
Sbjct: 114 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPN 173
Query: 278 RIVGTYGYMSPEYALEGIFSIK-------SDVFSFGVLLLEIV 313
VGT YM+PE L+ ++K +D+++ G++ EI
Sbjct: 174 HRVGTKRYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 29/211 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQG-LREMKNEASVIAKVQHKNLVRLLGCCI 181
+G+G FG V++G R G+E+AVK S R E+ RE + +V+ ++H+N++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM--LRHENILGFIAA-D 66
Query: 182 DKD-----EKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ---- 232
+KD + L+ +Y + SL FD R + +++ A GL +LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 233 -YSRVRIIHRDLKASNILLDKDMNPKISDFGMA--RICGGNELQANTSRIVGTYGYMSPE 289
+ I HRDLK+ NIL+ K+ I+D G+A + + + VGT YM+PE
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 290 YALEGIFSIK-------SDVFSFGVLLLEIV 313
L+ ++K +D+++ G++ EI
Sbjct: 183 -VLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 114 TNTFSDTNKLGEGGFGPVYKGV-LRKGDEIAV-----KRLSGRSEQGLREMKNEASVIAK 167
T + +LG+G F V + V + G E A K+LS R Q L + EA +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKL---EREARICRL 66
Query: 168 VQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGL 227
++H N+VRL ++ LI++ + L D R I+ I + +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAV 123
Query: 228 LYLHQYSRVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNELQANTSRIVGTYG 284
L+ HQ ++HR+LK N+LL K K++DFG+A G Q GT G
Sbjct: 124 LHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE--QQAWFGFAGTPG 178
Query: 285 YMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
Y+SPE + + D+++ GV+L ++ G
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL----RKGDEIAVKRLSGRSE-QGLREMKNEASVIAKVQH 170
T SD +G+G FG VY G + + A+K LS +E Q + E ++ + H
Sbjct: 23 THSD-RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNH 81
Query: 171 KNLVRLLGCCIDKDE-KILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
N++ L+G + + ++ YM + L F+ P + + + + +A+G+ Y
Sbjct: 82 PNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL--QVARGMEY 139
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNEL----QANTSRIVGTYGY 285
L + + +HRDL A N +LD+ K++DFG+AR E Q +R+ +
Sbjct: 140 L---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT- 195
Query: 286 MSPEYALEGI----FSIKSDVFSFGVLLLEIVS 314
ALE + F+ KSDV+SFGVLL E+++
Sbjct: 196 -----ALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 79 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 127 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGF 178
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 106/231 (45%), Gaps = 39/231 (16%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQGLR 156
F SV A +TF+ +G G G V + VL G +AVK+LS R
Sbjct: 9 QFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLS-------R 59
Query: 157 EMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP--- 205
+N+ AK ++ LV LL C K+ L+ + P K+L+ F L D
Sbjct: 60 PFQNQTH--AKRAYRELV-LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC 116
Query: 206 -TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA 264
+ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG+A
Sbjct: 117 QVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 265 RICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
R N + T +V Y Y +PE L ++ D++S G ++ E+V G
Sbjct: 174 RTACTNFMM--TPYVVTRY-YRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGF 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 117 FSDT-NKLGEGGFGPVYK-----GVLRKGDEIAVKRLSGRSEQGL--REMKNEASVIAKV 168
+ DT +LG G F V K L+ + KR + S +G+ +++ E S++ ++
Sbjct: 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
QH N++ L +K + ILI E + L FL ++ L + ++ I G+
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVY 127
Query: 229 YLHQYSRVRIIHRDLKASNI-LLDKDM-NP--KISDFGMA-RICGGNELQANTSRIVGTY 283
YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE + I GT
Sbjct: 128 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTP 180
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+++PE +++D++S GV+ ++SG
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 123 LGEGGFGPV--YKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
+G+G F V + +L G E+A+K + + + L+++ E ++ + H N+V+L
Sbjct: 23 IGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
+ LI EY + +L + + ++ + I Q Y HQ RI
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCHQK---RI 135
Query: 239 IHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYALEGIFS 297
+HRDLKA N+LLD DMN KI+DFG + G +L A +P YA +F
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCG---------APPYAAPELFQ 186
Query: 298 IKS------DVFSFGVLLLEIVSG 315
K DV+S GV+L +VSG
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 107 FSSVSTATNTFSDTN---KLGEGGFGPVYKGVLRKGDE------IAVKRLSGRSEQGLRE 157
F ++T T D +LG+G F V + V + + I K+LS R Q L
Sbjct: 20 FQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKL-- 77
Query: 158 MKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV 217
+ EA + ++H N+VRL ++ L+++ + L D R
Sbjct: 78 -EREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADAS 133
Query: 218 QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNELQA 274
I I + + ++HQ+ I+HRDLK N+LL K K++DFG+A G Q
Sbjct: 134 HCIHQILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGE--QQ 188
Query: 275 NTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
GT GY+SPE + + D+++ GV+L ++ G
Sbjct: 189 AWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGF 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 117 FSDT-NKLGEGGFGPVYK-----GVLRKGDEIAVKRLSGRSEQGL--REMKNEASVIAKV 168
+ DT +LG G F V K L+ + KR + S +G+ +++ E S++ ++
Sbjct: 12 YYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
QH N++ L +K + ILI E + L FL ++ L + ++ I G+
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVY 128
Query: 229 YLHQYSRVRIIHRDLKASNI-LLDKDM-NP--KISDFGMA-RICGGNELQANTSRIVGTY 283
YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE + I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTP 181
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+++PE +++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 117 FSDT-NKLGEGGFGPVYK-----GVLRKGDEIAVKRLSGRSEQGL--REMKNEASVIAKV 168
+ DT +LG G F V K L+ + KR + S +G+ +++ E S++ ++
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
QH N++ L +K + ILI E + L FL ++ L + ++ I G+
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVY 128
Query: 229 YLHQYSRVRIIHRDLKASNI-LLDKDM-NP--KISDFGMA-RICGGNELQANTSRIVGTY 283
YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE + I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTP 181
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+++PE +++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 23/212 (10%)
Query: 117 FSDT-NKLGEGGFGPVYK-----GVLRKGDEIAVKRLSGRSEQGL--REMKNEASVIAKV 168
+ DT +LG G F V K L+ + KR + S +G+ +++ E S++ ++
Sbjct: 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
QH N++ L +K + ILI E + L FL ++ L + ++ I G+
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVY 127
Query: 229 YLHQYSRVRIIHRDLKASNI-LLDKDMNP---KISDFGMA-RICGGNELQANTSRIVGTY 283
YLH ++I H DLK NI LLD+++ KI DFG+A +I GNE + I GT
Sbjct: 128 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTP 180
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+++PE +++D++S GV+ ++SG
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 117 FSDT-NKLGEGGFGPVYK-----GVLRKGDEIAVKRLSGRSEQGL--REMKNEASVIAKV 168
+ DT +LG G F V K L+ + KR + S +G+ +++ E S++ ++
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
QH N++ L +K + ILI E + L FL ++ L + ++ I G+
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVY 128
Query: 229 YLHQYSRVRIIHRDLKASNI-LLDKDM-NP--KISDFGMA-RICGGNELQANTSRIVGTY 283
YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE + I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTP 181
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+++PE +++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 117 FSDT-NKLGEGGFGPVYK-----GVLRKGDEIAVKRLSGRSEQGL--REMKNEASVIAKV 168
+ DT +LG G F V K L+ + KR + S +G+ +++ E S++ ++
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
QH N++ L +K + ILI E + L FL ++ L + ++ I G+
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVY 128
Query: 229 YLHQYSRVRIIHRDLKASNI-LLDKDM-NP--KISDFGMA-RICGGNELQANTSRIVGTY 283
YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE + I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTP 181
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+++PE +++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 117 FSDT-NKLGEGGFGPVYK-----GVLRKGDEIAVKRLSGRSEQGL--REMKNEASVIAKV 168
+ DT +LG G F V K L+ + KR + S +G+ +++ E S++ ++
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
QH N++ L +K + ILI E + L FL ++ L + ++ I G+
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVY 128
Query: 229 YLHQYSRVRIIHRDLKASNI-LLDKDM-NP--KISDFGMA-RICGGNELQANTSRIVGTY 283
YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE + I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTP 181
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+++PE +++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 123 LGEGGFGPV--YKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
+G+G F V + +L G E+AV+ + + + L+++ E ++ + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
+ L+ EY + +L + + + R + + I + Y HQ I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQ-IVSAVQYCHQKF---I 134
Query: 239 IHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYALEGIFS 297
+HRDLKA N+LLD DMN KI+DFG + GN+L SP YA +F
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG---------SPPYAAPELFQ 185
Query: 298 IKS------DVFSFGVLLLEIVSG 315
K DV+S GV+L +VSG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 117 FSDT-NKLGEGGFGPVYK-----GVLRKGDEIAVKRLSGRSEQGL--REMKNEASVIAKV 168
+ DT +LG G F V K L+ + KR + S +G+ +++ E S++ ++
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
QH N++ L +K + ILI E + L FL ++ L + ++ I G+
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVY 128
Query: 229 YLHQYSRVRIIHRDLKASNI-LLDKDM-NP--KISDFGMA-RICGGNELQANTSRIVGTY 283
YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE + I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTP 181
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+++PE +++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 79 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 127 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 178
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 105/209 (50%), Gaps = 14/209 (6%)
Query: 113 ATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVKR-LSGRSEQGLREMK-NEASVIAKVQ 169
+ + + +GEG +G V K + G +A+K+ L ++ ++++ E ++ +++
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
H+NLV LL C K L++E++ + LD P LD+ + + I G+ +
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGF 139
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSP 288
H ++ IIHRD+K NIL+ + K+ DFG AR + E+ + V T Y +P
Sbjct: 140 CHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE---VATRWYRAP 193
Query: 289 EYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
E + + + DV++ G L+ E+ G+
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 117 FSDT-NKLGEGGFGPVYK-----GVLRKGDEIAVKRLSGRSEQGL--REMKNEASVIAKV 168
+ DT +LG G F V K L+ + KR + S +G+ +++ E S++ ++
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
QH N++ L +K + ILI E + L FL ++ L + ++ I G+
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVY 128
Query: 229 YLHQYSRVRIIHRDLKASNI-LLDKDM-NP--KISDFGMA-RICGGNELQANTSRIVGTY 283
YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE + I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTP 181
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+++PE +++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 117 FSDT-NKLGEGGFGPVYK-----GVLRKGDEIAVKRLSGRSEQGL--REMKNEASVIAKV 168
+ DT +LG G F V K L+ + KR + S +G+ +++ E S++ ++
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
QH N++ L +K + ILI E + L FL ++ L + ++ I G+
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVY 128
Query: 229 YLHQYSRVRIIHRDLKASNI-LLDKDM-NP--KISDFGMA-RICGGNELQANTSRIVGTY 283
YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE + I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTP 181
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+++PE +++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRS----EQGLREMKNEASVIAKVQHKNLVRLLG 178
LG+GGF Y+ E+ ++ +S +M E ++ + + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
D D ++ E +SL ++ + + R + + I QG+ YLH R+
Sbjct: 94 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 147
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYALEGI 295
IHRDLK N+ L+ DM+ KI DFG+A +++ + R + GT Y++PE +
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKDLCGTPNYIAPEVLCKKG 202
Query: 296 FSIKSDVFSFGVLLLEIVSGK 316
S + D++S G +L ++ GK
Sbjct: 203 HSFEVDIWSLGCILYTLLVGK 223
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 108 SSVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEI----AVKRLSGRSEQGLREMKNEAS 163
+S S F +G G + V L+K D I VK+ ++ + ++ E
Sbjct: 13 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH 72
Query: 164 VIAKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG 222
V + H LV L C + + EY+ L F + +R L + R E
Sbjct: 73 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAE- 129
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGT 282
I+ L YLH+ II+RDLK N+LLD + + K++D+GM + G TS GT
Sbjct: 130 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGT 184
Query: 283 YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
Y++PE + D ++ GVL+ E+++G+
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRS----EQGLREMKNEASVIAKVQHKNLVRLLG 178
LG+GGF Y+ E+ ++ +S +M E ++ + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
D D ++ E +SL ++ + + R + + I QG+ YLH R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 163
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSI 298
IHRDLK N+ L+ DM+ KI DFG+A + + T + GT Y++PE + S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHSF 221
Query: 299 KSDVFSFGVLLLEIVSGK 316
+ D++S G +L ++ GK
Sbjct: 222 EVDIWSLGCILYTLLVGK 239
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 34/209 (16%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMK----------------NEASVIA 166
LG+G FG V+ VK++SG + L MK E ++
Sbjct: 32 LGQGSFGKVF----------LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 167 KVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQG 226
+V H +V+L + + LI +++ + D F + + + + + E +A
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYLAE-LALA 138
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
L +LH II+RDLK NILLD++ + K++DFG+++ +E +A + GT YM
Sbjct: 139 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYM 193
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+PE + +D +SFGVL+ E+++G
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 89 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 137 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 188
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 119 DTNKLGEGGFGPVYKGVLRKGDEIAVKRL----SGRSEQGLR-EMKNEASVIAKVQHKNL 173
+ +LG G FG V KG + + + + ++ L+ E+ EA+V+ ++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
VR++G C + + +L+ E L+ +L R + D ++++ ++ G+ YL +
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEE- 145
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE----LQANTSRIVGTYGYMSPE 289
+HRDL A N+LL KISDFG+++ +E Q + V Y +PE
Sbjct: 146 --SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APE 200
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVS-GKK 317
FS KSDV+SFGVL+ E S G+K
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 20/209 (9%)
Query: 119 DTNKLGEGGFGPVYKGVLRKGDEIAVKRL----SGRSEQGLR-EMKNEASVIAKVQHKNL 173
+ +LG G FG V KG + + + + ++ L+ E+ EA+V+ ++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
VR++G C + + +L+ E L+ +L R + D ++++ ++ G+ YL +
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEE- 145
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE----LQANTSRIVGTYGYMSPE 289
+HRDL A N+LL KISDFG+++ +E Q + V Y +PE
Sbjct: 146 --SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APE 200
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVS-GKK 317
FS KSDV+SFGVL+ E S G+K
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 108 SSVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRS----EQGLREMKNEAS 163
+S S F +G G + V L+K D I R+ + ++ + ++ E
Sbjct: 45 ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKH 104
Query: 164 VIAKV-QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG 222
V + H LV L C + + EY+ L F + +R L + R E
Sbjct: 105 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAE- 161
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGT 282
I+ L YLH+ II+RDLK N+LLD + + K++D+GM + G TS GT
Sbjct: 162 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGT 216
Query: 283 YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
Y++PE + D ++ GVL+ E+++G+
Sbjct: 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 39/231 (16%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQGLR 156
+F SV +TF+ + +G G G V Y +L + +A+K+LS R
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-------R 59
Query: 157 EMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP--- 205
+N+ AK ++ LV L+ C K+ L+ + P KSL+ F L D
Sbjct: 60 PFQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 206 -TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA 264
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG+A
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 265 RICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
R G + + T +V Y Y +PE L + D++S G ++ E++ G
Sbjct: 174 RTAGTSFMM--TPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 108/209 (51%), Gaps = 20/209 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEI-AVKRL------SGRSEQGLREMKNEASVIAKVQ 169
+ K+GEG +G V+K R+ EI A+KR+ G LRE+ ++ +++
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREI----CLLKELK 59
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
HKN+VRL + L++E+ ++ L + FD L + + + + + +GL +
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCNGDLDPEIVKSFLFQ-LLKGLGF 116
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + ++HRDLK N+L++++ K++DFG+AR G ++ ++ +V T Y P+
Sbjct: 117 CHSRN---VLHRDLKPQNLLINRNGELKLADFGLAR-AFGIPVRCYSAEVV-TLWYRPPD 171
Query: 290 YALEG-IFSIKSDVFSFGVLLLEIVSGKK 317
++S D++S G + E+ + +
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAAR 200
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRS----EQGLREMKNEASVIAKVQHKNLVRLLG 178
LG+GGF Y+ E+ ++ +S +M E ++ + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
D D ++ E +SL ++ + + R + + I QG+ YLH R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 163
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYALEGI 295
IHRDLK N+ L+ DM+ KI DFG+A +++ + R + GT Y++PE +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKDLCGTPNYIAPEVLCKKG 218
Query: 296 FSIKSDVFSFGVLLLEIVSGK 316
S + D++S G +L ++ GK
Sbjct: 219 HSFEVDIWSLGCILYTLLVGK 239
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
F SV +TF+ + +G G G V Y VL + +A+K+LS +++
Sbjct: 9 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 66
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDPT 206
+ E ++ V HKN++ LL + P K+L+ F L D
Sbjct: 67 AKRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDAN 114
Query: 207 K----RILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 115 LXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+AR G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 172 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLRKGD-EIAVKRLS------GRS-------EQGLREMKNE 161
++ KLG G +G V + G E A+K + GR E+ E+ NE
Sbjct: 37 SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNE 96
Query: 162 ASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT-KRILLDWVTRVQII 220
S++ + H N+++L DK L+ E+ L F+ R D I+
Sbjct: 97 ISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL----FEQIINRHKFDECDAANIM 152
Query: 221 EGIAQGLLYLHQYSRVRIIHRDLKASNILLDKD---MNPKISDFGMARICGGNELQANTS 277
+ I G+ YLH+++ I+HRD+K NILL+ +N KI DFG++ +
Sbjct: 153 KQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD---YKLR 206
Query: 278 RIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+GT Y++PE L+ ++ K DV+S GV++ ++ G
Sbjct: 207 DRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 117 FSDT-NKLGEGGFGPVYK-----GVLRKGDEIAVKRLSGRSEQGL--REMKNEASVIAKV 168
+ DT +LG G F V K L+ + KR + S +G+ +++ E S++ ++
Sbjct: 12 YYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
QH N++ L +K + ILI E + L FL ++ L + ++ I G+
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVY 128
Query: 229 YLHQYSRVRIIHRDLKASNI-LLDKDM-NP--KISDFGMA-RICGGNELQANTSRIVGTY 283
YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE + I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTP 181
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+++PE +++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 123 LGEGGFGPV--YKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
+G+G F V + +L G E+AV+ + + + L+++ E ++ + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
+ L+ EY + +L + + + R + + I + Y HQ I
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQ-IVSAVQYCHQKF---I 134
Query: 239 IHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYALEGIFS 297
+HRDLKA N+LLD DMN KI+DFG + GN+L SP YA +F
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCG---------SPPYAAPELFQ 185
Query: 298 IKS------DVFSFGVLLLEIVSG 315
K DV+S GV+L +VSG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRS----EQGLREMKNEASVIAKVQHKNLVRLLG 178
LG+GGF Y+ E+ ++ +S +M E ++ + + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
D D ++ E +SL ++ + + R + + I QG+ YLH R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 163
Query: 239 IHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGYMSPEYALEGI 295
IHRDLK N+ L+ DM+ KI DFG+A +++ + R + GT Y++PE +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKXLCGTPNYIAPEVLCKKG 218
Query: 296 FSIKSDVFSFGVLLLEIVSGK 316
S + D++S G +L ++ GK
Sbjct: 219 HSFEVDIWSLGCILYTLLVGK 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 103 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 151 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 202
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 111/225 (49%), Gaps = 42/225 (18%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRL------SGRSEQGLREMKNEASVIAKVQ-HKNL 173
KLG+G +G V+K + R+ G+ +AVK++ S +++ RE+ ++ ++ H+N+
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREI----MILTELSGHENI 71
Query: 174 VRLLGCC-IDKDEKI-LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLH 231
V LL D D + L+++YM L + +L+ V + ++ + + + YLH
Sbjct: 72 VNLLNVLRADNDRDVYLVFDYMETD-----LHAVIRANILEPVHKQYVVYQLIKVIKYLH 126
Query: 232 QYSRVRIIHRDLKASNILLDKDMNPKISDFGMA-------RICGGNELQANT-------- 276
++HRD+K SNILL+ + + K++DFG++ R+ L N
Sbjct: 127 SGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 277 ----SRIVGTYGYMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGK 316
+ V T Y +PE L K D++S G +L EI+ GK
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 16/207 (7%)
Query: 119 DTNKLGEGGFGPVYKGVLRKGDEIAVKRL----SGRSEQGLR-EMKNEASVIAKVQHKNL 173
+ +LG G FG V KG + + + + ++ L+ E+ EA+V+ ++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
VR++G C + + +L+ E L+ +L R + D ++++ ++ G+ YL +
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEE- 129
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTY--GYMSPEYA 291
+HRDL A N+LL KISDFG+++ +E ++ G + + +PE
Sbjct: 130 --SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-NXYKAQTHGKWPVKWYAPECI 186
Query: 292 LEGIFSIKSDVFSFGVLLLEIVS-GKK 317
FS KSDV+SFGVL+ E S G+K
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQK 213
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 102 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 150 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 201
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 117 FSDT-NKLGEGGFGPVYK-----GVLRKGDEIAVKRLSGRSEQGL--REMKNEASVIAKV 168
+ DT +LG G F V K L+ + KR + S +G+ +++ E S++ ++
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
QH N++ L +K + ILI E + L FL ++ L + ++ I G+
Sbjct: 72 QHPNVITLHEVYENKTDVILIGELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVY 128
Query: 229 YLHQYSRVRIIHRDLKASNI-LLDKDM-NP--KISDFGMA-RICGGNELQANTSRIVGTY 283
YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE + I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTP 181
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+++PE +++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 34/209 (16%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMK----------------NEASVIA 166
LG+G FG V+ VK++SG + L MK E ++
Sbjct: 32 LGQGSFGKVF----------LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 167 KVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQG 226
+V H +V+L + + LI +++ + D F + + + + + E +A
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYLAE-LALA 138
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
L +LH II+RDLK NILLD++ + K++DFG+++ +E +A + GT YM
Sbjct: 139 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYM 193
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+PE + +D +SFGVL+ E+++G
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 27/204 (13%)
Query: 123 LGEGGFGPV--YKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
+G+G F V + +L G E+A+K + + + L+++ E ++ + H N+V+L
Sbjct: 20 IGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
+ LI EY + +L + + ++ + I Q Y HQ RI
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCHQK---RI 132
Query: 239 IHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPEYALEGIFS 297
+HRDLKA N+LLD DMN KI+DFG + G +L SP YA +F
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCG---------SPPYAAPELFQ 183
Query: 298 IKS------DVFSFGVLLLEIVSG 315
K DV+S GV+L +VSG
Sbjct: 184 GKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 123 LGEGGFGPVYKGVLRK-GDEIAVK-----RLSGRSEQGLREMKNEASVIAKVQHKNLVRL 176
+G+G F V + + R+ G + AVK + + ++K EAS+ ++H ++V L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 177 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQI----IEGIAQGLLYLHQ 232
L +++E+M L F+ KR +V + + I + L Y H
Sbjct: 92 LETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 233 YSRVRIIHRDLKASNILLDKDMNP---KISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
+ IIHRD+K N+LL N K+ DFG+A G + L A VGT +M+PE
Sbjct: 149 NN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR--VGTPHFMAPE 203
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSG 315
+ DV+ GV+L ++SG
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 16/207 (7%)
Query: 119 DTNKLGEGGFGPVYKGVLRKGDEIAVKRL----SGRSEQGLR-EMKNEASVIAKVQHKNL 173
+ +LG G FG V KG + + + + ++ L+ E+ EA+V+ ++ + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
VR++G C + + +L+ E L+ +L R + D ++++ ++ G+ YL +
Sbjct: 89 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEE- 143
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTY--GYMSPEYA 291
+HRDL A N+LL KISDFG+++ +E ++ G + + +PE
Sbjct: 144 --SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-NYYKAQTHGKWPVKWYAPECI 200
Query: 292 LEGIFSIKSDVFSFGVLLLEIVS-GKK 317
FS KSDV+SFGVL+ E S G+K
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFSYGQK 227
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 34/209 (16%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMK----------------NEASVIA 166
LG+G FG V+ VK++SG + L MK E ++
Sbjct: 33 LGQGSFGKVF----------LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 82
Query: 167 KVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQG 226
+V H +V+L + + LI +++ + D F + + + + + E +A
Sbjct: 83 EVNHPFIVKLHYAFQTEGKLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFYLAE-LALA 139
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYM 286
L +LH II+RDLK NILLD++ + K++DFG+++ +E +A + GT YM
Sbjct: 140 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYM 194
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+PE + +D +SFGVL+ E+++G
Sbjct: 195 APEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 117 FSDT-NKLGEGGFGPVYK-----GVLRKGDEIAVKRLSGRSEQGL--REMKNEASVIAKV 168
+ DT +LG G F V K L+ + KR + S +G+ +++ E S++ ++
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
QH N++ L +K + ILI E + L FL ++ L + ++ I G+
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVY 128
Query: 229 YLHQYSRVRIIHRDLKASNI-LLDKDM-NP--KISDFGMA-RICGGNELQANTSRIVGTY 283
YLH ++I H DLK NI LLD+++ P KI DFG+A +I GNE + I GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----NIFGTP 181
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+++PE +++D++S GV+ ++SG
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 94/168 (55%), Gaps = 16/168 (9%)
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKIL--IYEYMPNKSLDFFLFDPTKRILLD 212
+ ++ E +++ K+ H N+V+L+ D +E L ++E + + + PT + L +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSE 136
Query: 213 WVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA-RICGGNE 271
R + + +G+ YLH +IIHRD+K SN+L+ +D + KI+DFG++ G +
Sbjct: 137 DQARF-YFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 272 LQANTSRIVGTYGYMSPEYALE--GIFSIKS-DVFSFGVLLLEIVSGK 316
L +NT VGT +M+PE E IFS K+ DV++ GV L V G+
Sbjct: 193 LLSNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 16/207 (7%)
Query: 119 DTNKLGEGGFGPVYKGVLRKGDEIAVKRL----SGRSEQGLR-EMKNEASVIAKVQHKNL 173
+ +LG G FG V KG + + + + ++ L+ E+ EA+V+ ++ + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
VR++G C + + +L+ E L+ +L R + D ++++ ++ G+ YL +
Sbjct: 71 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEE- 125
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTY--GYMSPEYA 291
+HRDL A N+LL KISDFG+++ +E ++ G + + +PE
Sbjct: 126 --SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-NYYKAQTHGKWPVKWYAPECI 182
Query: 292 LEGIFSIKSDVFSFGVLLLEIVS-GKK 317
FS KSDV+SFGVL+ E S G+K
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSYGQK 209
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 105/231 (45%), Gaps = 39/231 (16%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQGLR 156
F SV A +TF+ +G G G V + VL G +AVK+LS R
Sbjct: 7 QFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLS-------R 57
Query: 157 EMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP--- 205
+N+ AK ++ LV LL C K+ L+ + P K+L+ F L D
Sbjct: 58 PFQNQTH--AKRAYRELV-LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC 114
Query: 206 -TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA 264
+ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG+A
Sbjct: 115 QVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 171
Query: 265 RICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
R N + T +V Y Y +PE L + D++S G ++ E+V G
Sbjct: 172 RTASTNFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 92
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 93 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 140
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 141 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 192
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 90 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 138 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMTGY 189
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 16/207 (7%)
Query: 119 DTNKLGEGGFGPVYKGVLRKGDEIAVKRL----SGRSEQGLR-EMKNEASVIAKVQHKNL 173
+ +LG G FG V KG + + + + ++ L+ E+ EA+V+ ++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
VR++G C + + +L+ E L+ +L R + D ++++ ++ G+ YL +
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEE- 129
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTY--GYMSPEYA 291
+HRDL A N+LL KISDFG+++ +E ++ G + + +PE
Sbjct: 130 --SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-NYYKAQTHGKWPVKWYAPECI 186
Query: 292 LEGIFSIKSDVFSFGVLLLEIVS-GKK 317
FS KSDV+SFGVL+ E S G+K
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQK 213
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 90 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 138 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMTGY 189
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 90 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 138 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMTGY 189
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 16/207 (7%)
Query: 119 DTNKLGEGGFGPVYKGVLRKGDEIAVKRL----SGRSEQGLR-EMKNEASVIAKVQHKNL 173
+ +LG G FG V KG + + + + ++ L+ E+ EA+V+ ++ + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
VR++G C + + +L+ E L+ +L R + D ++++ ++ G+ YL +
Sbjct: 81 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEES 136
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTY--GYMSPEYA 291
+ +HRDL A N+LL KISDFG+++ +E ++ G + + +PE
Sbjct: 137 N---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-NYYKAQTHGKWPVKWYAPECI 192
Query: 292 LEGIFSIKSDVFSFGVLLLEIVS-GKK 317
FS KSDV+SFGVL+ E S G+K
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFSYGQK 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
+F SV +TF+ + +G G G V Y +L + +A+K+LS +++
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTH 66
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDPT 206
+ E ++ V HKN++ LL + P KSL+ F L D
Sbjct: 67 AKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 207 K----RILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+AR G + + T +V Y Y +PE L + D++S G ++ E++ G
Sbjct: 172 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 39/231 (16%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQGLR 156
+F SV +TF+ + +G G G V Y +L + +A+K+LS R
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-------R 59
Query: 157 EMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDPTK- 207
+N+ AK ++ LV L+ C K+ L+ + P KSL+ F L D
Sbjct: 60 PFQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 208 ---RILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA 264
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG+A
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLA 173
Query: 265 RICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
R G + + T +V Y Y +PE L + D++S G ++ E++ G
Sbjct: 174 RTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 16/207 (7%)
Query: 119 DTNKLGEGGFGPVYKGVLRKGDEIAVKRL----SGRSEQGLR-EMKNEASVIAKVQHKNL 173
+ +LG G FG V KG + + + + ++ L+ E+ EA+V+ ++ + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
VR++G C + + +L+ E L+ +L R + D ++++ ++ G+ YL +
Sbjct: 69 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEE- 123
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTY--GYMSPEYA 291
+HRDL A N+LL KISDFG+++ +E ++ G + + +PE
Sbjct: 124 --SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE-NYYKAQTHGKWPVKWYAPECI 180
Query: 292 LEGIFSIKSDVFSFGVLLLEIVS-GKK 317
FS KSDV+SFGVL+ E S G+K
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFSYGQK 207
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 48/255 (18%)
Query: 84 LPLNSKLIERSKKKEVDQLPLFSFS----SVSTATNTFSDTNKLGEGGFGPVYKGV-LRK 138
+P S ++E S+++ P F ++ + + + +G G +G V +
Sbjct: 15 VPRGSHMLEMSQER-----PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKT 69
Query: 139 GDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPN 195
G +AVK+LS R Q + K E ++ ++H+N++ LL + P
Sbjct: 70 GLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 116
Query: 196 KSL----DFFLFDPTKRILLDWVTRVQ---------IIEGIAQGLLYLHQYSRVRIIHRD 242
+SL D +L L+ + + Q +I I +GL Y+H IIHRD
Sbjct: 117 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRD 173
Query: 243 LKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI-FSIKSD 301
LK SN+ +++D KI DFG+AR + V T Y +PE L + ++ D
Sbjct: 174 LKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 228
Query: 302 VFSFGVLLLEIVSGK 316
++S G ++ E+++G+
Sbjct: 229 IWSVGCIMAELLTGR 243
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 107/232 (46%), Gaps = 39/232 (16%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQGLR 156
F SV +TF+ + +G G G V Y VL + +A+K+LS R
Sbjct: 9 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-------R 59
Query: 157 EMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP--- 205
+N+ AK ++ LV L+ C K+ L+ + P K+L+ F L D
Sbjct: 60 PFQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLX 116
Query: 206 -TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA 264
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG+A
Sbjct: 117 QVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLA 173
Query: 265 RICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
R G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 174 RTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRA 190
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 77
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 138 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRA 191
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 192 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 107/232 (46%), Gaps = 39/232 (16%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQGLR 156
F SV +TF+ + +G G G V Y VL + +A+K+LS R
Sbjct: 2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLS-------R 52
Query: 157 EMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP--- 205
+N+ AK ++ LV L+ C K+ L+ + P K+L+ F L D
Sbjct: 53 PFQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLX 109
Query: 206 -TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA 264
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG+A
Sbjct: 110 QVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLA 166
Query: 265 RICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
R G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 167 RTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 88 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 136 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGY 187
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 103 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+
Sbjct: 151 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEMXGX---- 202
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
+F SV +TF+ + +G G G V Y +L + +A+K+LS +++
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTH 66
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP- 205
+ E ++ V HKN++ LL + P KSL+ F L D
Sbjct: 67 AKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 206 ---TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG 171
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+AR G + + T +V Y Y +PE L + D++S G ++ E++ G
Sbjct: 172 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRA 190
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 95
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 156 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRA 209
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 210 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 88
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 149 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRA 202
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
F SV +TF+ + +G G G V Y VL + +A+K+LS +++
Sbjct: 9 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 66
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP- 205
+ E ++ V HKN++ LL + P K+L+ F L D
Sbjct: 67 AKRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDAN 114
Query: 206 ---TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 115 LXQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+AR G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 172 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ QG E ++ K+ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIV 76
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRA 190
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
+F SV +TF+ + +G G G V Y +L + +A+K+LS +++
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTH 66
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP- 205
+ E ++ V HKN++ LL + P KSL+ F L D
Sbjct: 67 AKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 206 ---TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFG 171
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+AR G + + T +V Y Y +PE L + D++S G ++ E++ G
Sbjct: 172 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 39/231 (16%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQGLR 156
+F SV +TF+ + +G G G V Y +L + +A+K+LS R
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-------R 59
Query: 157 EMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP--- 205
+N+ AK ++ LV L+ C K+ L+ + P KSL+ F L D
Sbjct: 60 PFQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 206 -TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA 264
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG+A
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 265 RICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
R G + + T +V Y Y +PE L + D++S G ++ E++ G
Sbjct: 174 RTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 84
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 145 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRA 198
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 199 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 123 LGEGGFGPVYKGVLRKGDEI----AVKRLSGRSEQGLREMKNEASVIAKV-QHKNLVRLL 177
+G G + V L+K D I VK+ ++ + ++ E V + H LV L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
C + + EY+ L F + +R L + R E I+ L YLH+
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAE-ISLALNYLHERG--- 126
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFS 297
II+RDLK N+LLD + + K++D+GM + G TS GT Y++PE +
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYG 184
Query: 298 IKSDVFSFGVLLLEIVSGK 316
D ++ GVL+ E+++G+
Sbjct: 185 FSVDWWALGVLMFEMMAGR 203
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 80 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 127
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 128 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 179
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 123 LGEGGFGPVYKGVLRKGDEI----AVKRLSGRSEQGLREMKNEASVIAKV-QHKNLVRLL 177
+G G + V L+K D I VK+ ++ + ++ E V + H LV L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
C + + EY+ L F + +R L + R E I+ L YLH+
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAE-ISLALNYLHERG--- 130
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFS 297
II+RDLK N+LLD + + K++D+GM + G TS GT Y++PE +
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYG 188
Query: 298 IKSDVFSFGVLLLEIVSGK 316
D ++ GVL+ E+++G+
Sbjct: 189 FSVDWWALGVLMFEMMAGR 207
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRA 190
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 39/231 (16%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQGLR 156
+F SV +TF+ + +G G G V Y +L + +A+K+LS R
Sbjct: 10 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-------R 60
Query: 157 EMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP--- 205
+N+ AK ++ LV L+ C K+ L+ + P KSL+ F L D
Sbjct: 61 PFQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 117
Query: 206 -TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA 264
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG+A
Sbjct: 118 QVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 174
Query: 265 RICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
R G + + T +V Y Y +PE L + D++S G ++ E++ G
Sbjct: 175 RTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
F SV +TF+ + +G G G V Y VL + +A+K+LS +++
Sbjct: 9 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 66
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP- 205
+ E ++ V HKN++ LL + P K+L+ F L D
Sbjct: 67 AKRAYRELVLMKXVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDAN 114
Query: 206 ---TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+AR G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 172 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ QG E ++ K+ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIV 76
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRA 190
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGX 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 79 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 127 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 178
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 39/231 (16%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQGLR 156
+F SV +TF+ + +G G G V Y +L + +A+K+LS R
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-------R 59
Query: 157 EMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP--- 205
+N+ AK ++ LV L+ C K+ L+ + P KSL+ F L D
Sbjct: 60 PFQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 206 -TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA 264
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG+A
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 265 RICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
R G + + T +V Y Y +PE L + D++S G ++ E++ G
Sbjct: 174 RTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 88 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 136 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 187
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 26/209 (12%)
Query: 123 LGEGGFGPVYKGVLRK-GD-------EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
LG+G F ++KGV R+ GD E+ +K L AS+++K+ HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYS 234
G C+ DE IL+ E++ SLD +L I + W ++++ + +A + +L + +
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFLEENT 133
Query: 235 RVRIIHRDLKASNILL-----DKDMNP---KISDFGMARICGGNELQANTSRIVGTYGYM 286
+IH ++ A NILL K NP K+SD G++ ++ V
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+P+ ++ +D +SFG L EI SG
Sbjct: 191 NPKN-----LNLATDKWSFGTTLWEICSG 214
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 80 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 127
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 128 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 179
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 110
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 171 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRA 224
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 89
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 150 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRA 203
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 204 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 88 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 136 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 187
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 85 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 133 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 184
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 82 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 129
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 130 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 181
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 81 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 128
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 129 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 180
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 88
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 149 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRA 202
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ QG E ++ K+ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIV 76
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRA 190
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 81
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 142 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRA 195
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 196 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 85 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 133 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 184
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 90 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 137
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 138 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 189
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 88 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 135
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 136 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGY 187
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRA 190
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 104
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 165 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRA 218
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 219 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 89 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 137 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 188
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGT 282
+A+G+ +L S + IHRDL A NILL ++ KI DFG+AR N
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 283 YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + I+S KSDV+S+GVLL EI S
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 94 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 142 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 193
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 85 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 133 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 184
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 80
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 141 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRA 194
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 195 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 95 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 143 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 194
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 95 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 143 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 194
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 89 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 137 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 188
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 94 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 142 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGY 193
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 110
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 171 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRA 224
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 103 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 151 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 202
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 102 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 150 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 201
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 12/203 (5%)
Query: 117 FSDTNKLGEGGFGPVYKGVLR-KGDEIAVKR-LSGRSEQGLREMK-NEASVIAKVQHKNL 173
+ K+GEG +G V+K R G +A+K+ L + ++++ E ++ +++H NL
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNL 64
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
V LL K L++EY + L D +R + + + + I Q + + H++
Sbjct: 65 VNLLEVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVK-SITWQTLQAVNFCHKH 121
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYAL- 292
+ IHRD+K NIL+ K K+ DFG AR+ G + V T Y SPE +
Sbjct: 122 N---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYRSPELLVG 176
Query: 293 EGIFSIKSDVFSFGVLLLEIVSG 315
+ + DV++ G + E++SG
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSG 199
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 112
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 173 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRA 226
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 227 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 28/227 (12%)
Query: 117 FSDTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKV 168
+++ + +GEG +G V Y V + +A+K++S Q LRE+K ++ +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIK----ILLRF 78
Query: 169 QHKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIA 224
+H+N++ + I++ + + I + + D + T+ + D + + I
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQIL 134
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTY 283
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 284 GYMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
F SV +TF+ + +G G G V Y VL + +A+K+LS +++
Sbjct: 3 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 60
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP- 205
+ E ++ V HKN++ LL + P K+L+ F L D
Sbjct: 61 AKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDAN 108
Query: 206 ---TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 165
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+AR G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 166 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F +G G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EYMP + F +RI + AQ +L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+L+D+ K++DFG A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 85 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 132
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 133 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGY 184
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
F SV +TF+ + +G G G V Y VL + +A+K+LS +++
Sbjct: 2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 59
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP- 205
+ E ++ V HKN++ LL + P K+L+ F L D
Sbjct: 60 AKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDAN 107
Query: 206 ---TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 108 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 164
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+AR G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 165 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
F SV +TF+ + +G G G V Y VL + +A+K+LS +++
Sbjct: 8 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 65
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP- 205
+ E ++ V HKN++ LL + P K+L+ F L D
Sbjct: 66 AKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDAN 113
Query: 206 ---TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 114 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 170
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+AR G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 171 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
F SV +TF+ + +G G G V Y VL + +A+K+LS +++
Sbjct: 3 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 60
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP- 205
+ E ++ V HKN++ LL + P K+L+ F L D
Sbjct: 61 AKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDAN 108
Query: 206 ---TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 165
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+AR G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 166 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 114
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 175 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRA 228
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 229 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 28/227 (12%)
Query: 117 FSDTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKV 168
+++ + +GEG +G V Y V + +A+K++S Q LRE+K ++ +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIK----ILLRF 78
Query: 169 QHKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIA 224
+H+N++ + I++ + + I + + D + T+ + D + + I
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQIL 134
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTY 283
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 284 GYMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVK--RLSGRSEQGLREMKNEASVIAKVQHK 171
N + ++G G G V+K RK G IAVK R SG E+ R + + V+
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 172 NLVRLLGCCIDKDEKILIYEYMPN--KSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
+V+ G I + + E M + L + P +L +T I + L Y
Sbjct: 85 YIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVA-----IVKALYY 139
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
L + + +IHRD+K SNILLD+ K+ DFG I G R G YM+PE
Sbjct: 140 LKE--KHGVIHRDVKPSNILLDERGQIKLCDFG---ISGRLVDDKAKDRSAGCAAYMAPE 194
Query: 290 Y-----ALEGIFSIKSDVFSFGVLLLEIVSGK 316
+ + I++DV+S G+ L+E+ +G+
Sbjct: 195 RIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
F SV +TF+ + +G G G V Y VL + +A+K+LS +++
Sbjct: 9 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 66
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP- 205
+ E ++ V HKN++ LL + P K+L+ F L D
Sbjct: 67 AKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDAN 114
Query: 206 ---TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+AR G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 172 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
F SV +TF+ + +G G G V Y VL + +A+K+LS +++
Sbjct: 10 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 67
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP- 205
+ E ++ V HKN++ LL + P K+L+ F L D
Sbjct: 68 AKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDAN 115
Query: 206 ---TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 172
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+AR G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 173 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 28/227 (12%)
Query: 117 FSDTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKV 168
+++ + +GEG +G V Y V + +A+K++S Q LRE+K ++ +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIK----ILLRF 78
Query: 169 QHKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIA 224
+H+N++ + I++ + + I + + D + T+ + D + + I
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQIL 134
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTY 283
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 284 GYMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 28/227 (12%)
Query: 117 FSDTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKV 168
+++ + +GEG +G V Y V + +A+K++S Q LRE+K ++ +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIK----ILLRF 78
Query: 169 QHKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIA 224
+H+N++ + I++ + + I + + D + T+ + D + + I
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQIL 134
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTY 283
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 284 GYMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 104/266 (39%), Gaps = 72/266 (27%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGD-EIAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNLV 174
F +G GGFG V++ + D A+KR+ + + RE + E +AK++H +V
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 175 RLLGCCIDKDEKILIYE----YMPNKSLDFFLFDPT------------------------ 206
R ++ + E ++ ++S D+ L P+
Sbjct: 68 RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQL 127
Query: 207 -----------------KRILLDWVTR------------VQIIEGIAQGLLYLHQYSRVR 237
K L DW+ R + I IA+ + +LH
Sbjct: 128 QPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG--- 184
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQ----------ANTSRIVGTYGYMS 287
++HRDLK SNI D K+ DFG+ +E + A VGT YMS
Sbjct: 185 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMS 244
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIV 313
PE +S K D+FS G++L E++
Sbjct: 245 PEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 106 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 153
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +E+
Sbjct: 154 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT-DDEMXG----Y 205
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
F SV +TF+ + +G G G V Y VL + +A+K+LS +++
Sbjct: 9 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 66
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP- 205
+ E ++ V HKN++ LL + P K+L+ F L D
Sbjct: 67 AKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDAN 114
Query: 206 ---TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+AR G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 172 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 43/234 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
+F SV +TF+ + +G G G V Y +L + +A+K+LS +++
Sbjct: 3 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTH 60
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP- 205
+ E ++ V HKN++ LL + P KSL+ F L D
Sbjct: 61 AKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 108
Query: 206 ---TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 109 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 165
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+AR G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 166 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F +G G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EYMP + F +RI + AQ +L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+L+D+ K++DFG A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L+E++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY P + F +RI + AQ +L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+++D+ K++DFG+A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 89 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 137 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGY 188
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 19/210 (9%)
Query: 116 TFSDTNKLGEGGFGPVYKGVL-RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
+++DT +G G FG VY+ L G+ +A+K++ Q R E ++ K+ H N+V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 155
Query: 175 RLLGCCIDKDEKI------LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
RL EK L+ +Y+P + L + + + + L
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMS 287
Y+H + I HRD+K N+LLD D K+ DFG A+ E N S I Y Y +
Sbjct: 216 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRA 269
Query: 288 PEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
PE ++ DV+S G +L E++ G+
Sbjct: 270 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 111/227 (48%), Gaps = 28/227 (12%)
Query: 117 FSDTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKV 168
+++ + +GEG +G V Y V + +A+K++S Q LRE+K ++ +
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIK----ILLRF 98
Query: 169 QHKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIA 224
+H+N++ + I++ + + + ++ D + T+ + D + + I
Sbjct: 99 RHENIIGINDIIRAPTIEQMKDVYLVTHL--MGADLYKLLKTQHLSNDHI--CYFLYQIL 154
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTY 283
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 155 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 284 GYMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 258
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 19/205 (9%)
Query: 119 DTNKLGEGGFGPVYKGVLRKGDEIAVKRL----SGRSEQGLR-EMKNEASVIAKVQHKNL 173
+ +LG G FG V KG + + + + ++ L+ E+ EA+V+ ++ + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
VR++G C + + +L+ E L+ +L R + D ++++ ++ G+ YL +
Sbjct: 433 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEES 488
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE----LQANTSRIVGTYGYMSPE 289
+ +HRDL A N+LL KISDFG+++ +E Q + V Y +PE
Sbjct: 489 N---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APE 542
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVS 314
FS KSDV+SFGVL+ E S
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 28/227 (12%)
Query: 117 FSDTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKV 168
+++ + +GEG +G V Y V + +A+K++S Q LRE+K ++ +
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIK----ILLRF 80
Query: 169 QHKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIA 224
+H+N++ + I++ + + I + + D + T+ + D + + I
Sbjct: 81 RHENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQIL 136
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTY 283
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 284 GYMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 240
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFF--LFDPTKRILLDWVTRVQ-----------I 219
++ LL + P +SL+ F ++ T + D V+ +
Sbjct: 79 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL 126
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR +
Sbjct: 127 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 178
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 19/205 (9%)
Query: 119 DTNKLGEGGFGPVYKGVLRKGDEIAVKRL----SGRSEQGLR-EMKNEASVIAKVQHKNL 173
+ +LG G FG V KG + + + + ++ L+ E+ EA+V+ ++ + +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
VR++G C + + +L+ E L+ +L R + D ++++ ++ G+ YL +
Sbjct: 434 VRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQVSMGMKYLEE- 488
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE----LQANTSRIVGTYGYMSPE 289
+HRDL A N+LL KISDFG+++ +E Q + V Y +PE
Sbjct: 489 --SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APE 543
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVS 314
FS KSDV+SFGVL+ E S
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNLVRLL 177
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G I ++ +I E L FL ++ LD + + ++ L YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYALEGIF 296
+HRD+ A N+L+ + K+ DFG++R + +A+ ++ +M+PE F
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL--PIKWMAPESINFRRF 189
Query: 297 SIKSDVFSFGVLLLEIV 313
+ SDV+ FGV + EI+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
F SV +TF+ + +G G G V Y VL + +A+K+LS +++
Sbjct: 10 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 67
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP- 205
+ E ++ V HKN++ LL + P K+L+ F L D
Sbjct: 68 AKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDAN 115
Query: 206 ---TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 116 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 172
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+AR G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 173 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 43/233 (18%)
Query: 107 FSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQGL 155
F SV +TF+ + +G G G V Y VL + +A+K+LS +++
Sbjct: 48 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHA 105
Query: 156 REMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDPTK 207
+ E ++ V HKN++ LL + P K+L+ F L D
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDANL 153
Query: 208 ----RILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGM 263
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG+
Sbjct: 154 CQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL 210
Query: 264 ARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
AR G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 211 ARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 28/227 (12%)
Query: 117 FSDTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKV 168
+++ + +GEG +G V Y V + +A+K++S Q LRE+K ++ +
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIK----ILLRF 86
Query: 169 QHKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIA 224
+H+N++ + I++ + + I + + D + T+ + D + + I
Sbjct: 87 RHENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQIL 142
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTY 283
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 143 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 284 GYMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 246
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 28/227 (12%)
Query: 117 FSDTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKV 168
+++ + +GEG +G V Y V + +A+K++S Q LRE+K ++ +
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIK----ILLRF 78
Query: 169 QHKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIA 224
+H+N++ + I++ + + I + + D + T+ + D + + I
Sbjct: 79 RHENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQIL 134
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTY 283
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 284 GYMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 238
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 123 LGEGGFGPV--YKGVLRKGDEIAVKRL--SGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
+G+G F V + +L G E+AVK + + + L+++ E + + H N+V+L
Sbjct: 22 IGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
+ L+ EY + +L + + + + I Q Y HQ I
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ---YCHQKF---I 134
Query: 239 IHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPE-YALEGIF 296
+HRDLKA N+LLD D N KI+DFG + GN+L A G Y +PE + +
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA----FCGAPPYAAPELFQGKKYD 190
Query: 297 SIKSDVFSFGVLLLEIVSG 315
+ DV+S GV+L +VSG
Sbjct: 191 GPEVDVWSLGVILYTLVSG 209
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
F SV +TF+ + +G G G V Y VL + +A+K+LS +++
Sbjct: 47 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 104
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDP- 205
+ E ++ V HKN++ LL + P K+L+ F L D
Sbjct: 105 AKRAYRELVLMKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVMELMDAN 152
Query: 206 ---TKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 153 LCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 209
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+AR G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 210 LARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 28/227 (12%)
Query: 117 FSDTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKV 168
+++ + +GEG +G V Y V + +A+K++S Q LRE+K ++ +
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIK----ILLRF 98
Query: 169 QHKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIA 224
+H+N++ + I++ + + I + + D + T+ + D + + I
Sbjct: 99 RHENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQIL 154
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTY 283
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 155 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 284 GYMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 258
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 16/211 (7%)
Query: 110 VSTATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK---RLSGRSEQGLREMKNEASVI 165
V DT LG G FG V G + G ++AVK R RS + ++K E +
Sbjct: 8 VKIGHYVLGDT--LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL 65
Query: 166 AKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
+H ++++L + ++ EY+ L ++ K ++ + ++ + I
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI---CKHGRVEEMEARRLFQQILS 122
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGY 285
+ Y H++ ++HRDLK N+LLD MN KI+DFG++ + E ++ G+ Y
Sbjct: 123 AVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNY 176
Query: 286 MSPEYALEGIFS-IKSDVFSFGVLLLEIVSG 315
+PE +++ + D++S GV+L ++ G
Sbjct: 177 AAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 123 LGEGGFGPVYKGVLRK-GD-------EIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
LG+G F ++KGV R+ GD E+ +K L AS+++K+ HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYS 234
G C DE IL+ E++ SLD +L I + W ++++ + +A + +L + +
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFLEENT 133
Query: 235 RVRIIHRDLKASNILL-----DKDMNP---KISDFGMARICGGNELQANTSRIVGTYGYM 286
+IH ++ A NILL K NP K+SD G++ ++ V
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
+P+ ++ +D +SFG L EI SG
Sbjct: 191 NPKN-----LNLATDKWSFGTTLWEICSG 214
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 39/232 (16%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQGLR 156
+F SV +TF+ + +G G G V Y +L + +A+K+LS R
Sbjct: 14 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-------R 64
Query: 157 EMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDPTK- 207
+N+ AK ++ LV L+ C K+ L+ + P KSL+ F L D
Sbjct: 65 PFQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 121
Query: 208 ---RILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA 264
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG+A
Sbjct: 122 QVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 178
Query: 265 RICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
R G + + T +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 179 RTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI D+G+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 108/209 (51%), Gaps = 20/209 (9%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDEI-AVKRL------SGRSEQGLREMKNEASVIAKVQ 169
+ K+GEG +G V+K R+ EI A+KR+ G LRE+ ++ +++
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREI----CLLKELK 59
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
HKN+VRL + L++E+ ++ L + FD L + + + + + +GL +
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCNGDLDPEIVKSFLFQ-LLKGLGF 116
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
H + ++HRDLK N+L++++ K+++FG+AR G ++ ++ +V T Y P+
Sbjct: 117 CHSRN---VLHRDLKPQNLLINRNGELKLANFGLAR-AFGIPVRCYSAEVV-TLWYRPPD 171
Query: 290 YALEG-IFSIKSDVFSFGVLLLEIVSGKK 317
++S D++S G + E+ + +
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANAGR 200
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 37/217 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN--EASVIAKVQHKNL 173
+ + + +G G +G V + G +AVK+LS + + + E ++ ++H+N+
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------II 220
+ LL + P +SL D +L L+ + + Q +I
Sbjct: 96 IGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 143
Query: 221 EGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIV 280
I +GL Y+H IIHRDLK SN+ +++D KI DFG+AR + V
Sbjct: 144 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYV 195
Query: 281 GTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 123 LGEGGFGPVYKGVLRKGDEI--AVKRLSGRSEQGLREMKN---EASVIAK-VQHKNLVRL 176
+G+G FG V K +E+ AVK L ++ +E K+ E +V+ K V+H LV L
Sbjct: 46 IGKGSFGKVLLA-RHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 177 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRV 236
D+ + +Y+ L + L +R L+ R E IA L YLH +
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHL--QRERCFLEPRARFYAAE-IASALGYLHS---L 158
Query: 237 RIIHRDLKASNILLDKDMNPKISDFGMARICGGN-ELQANTSRIVGTYGYMSPEYALEGI 295
I++RDLK NILLD + ++DFG+ C N E + TS GT Y++PE +
Sbjct: 159 NIVYRDLKPENILLDSQGHIVLTDFGL---CKENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 296 FSIKSDVFSFGVLLLEIVSG 315
+ D + G +L E++ G
Sbjct: 216 YDRTVDWWCLGAVLYEMLYG 235
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 39/231 (16%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQGLR 156
+F SV +TF+ + +G G G V Y +L + +A+K+LS R
Sbjct: 11 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLS-------R 61
Query: 157 EMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDPTK- 207
+N+ AK ++ LV L+ C K+ L+ + P KSL+ F L D
Sbjct: 62 PFQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 118
Query: 208 ---RILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA 264
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG+A
Sbjct: 119 QVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 175
Query: 265 RICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
R G + + V T Y +PE L + D++S G ++ E++ G
Sbjct: 176 RTAGTSFMMVP---FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 26/226 (11%)
Query: 117 FSDTNKLGEGGFGPVYKGV--LRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKVQ 169
+++ + +GEG +G V L K +A+K++S Q LRE+K ++ + +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIK----ILLRFR 83
Query: 170 HKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
H+N++ + I++ + + I + + D + T+ + D + + I +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQILR 139
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTYG 284
GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 140 GLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 285 YMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 26/226 (11%)
Query: 117 FSDTNKLGEGGFGPVYKGV--LRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKVQ 169
+++ + +GEG +G V L K +A+K++S Q LRE+K ++ + +
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIK----ILLRFR 84
Query: 170 HKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
H+N++ + I++ + + I + + D + T+ + D + + I +
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQILR 140
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTYG 284
GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 141 GLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 285 YMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 243
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 26/226 (11%)
Query: 117 FSDTNKLGEGGFGPVYKGV--LRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKVQ 169
+++ + +GEG +G V L K +A+K++S Q LRE+K ++ + +
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIK----ILLRFR 85
Query: 170 HKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
H+N++ + I++ + + I + + D + T+ + D + + I +
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQILR 141
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTYG 284
GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 142 GLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 285 YMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 244
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 26/226 (11%)
Query: 117 FSDTNKLGEGGFGPVYKGV--LRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKVQ 169
+++ + +GEG +G V L K +A+K++S Q LRE+K ++ + +
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIK----ILLRFR 76
Query: 170 HKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
H+N++ + I++ + + I + + D + T+ + D + + I +
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQILR 132
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTYG 284
GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 133 GLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 285 YMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 235
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 26/226 (11%)
Query: 117 FSDTNKLGEGGFGPVYKGV--LRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKVQ 169
+++ + +GEG +G V L K +A+K++S Q LRE+K ++ + +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIK----ILLRFR 83
Query: 170 HKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
H+N++ + I++ + + I + + D + T+ + D + + I +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQILR 139
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTYG 284
GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 140 GLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 285 YMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 111/233 (47%), Gaps = 29/233 (12%)
Query: 100 DQLPLFSFSSVSTATNTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVK-------RLSGRS 151
D+LP +++ + + +G G V + V R G E AVK RLS
Sbjct: 81 DELP--DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQ 138
Query: 152 EQGLRE-MKNEASVIAKVQ-HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRI 209
+ +RE + E ++ +V H +++ L+ L+++ M L +L T+++
Sbjct: 139 LEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---TEKV 195
Query: 210 LLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA-RICG 268
L I+ + + + +LH + I+HRDLK NILLD +M ++SDFG + +
Sbjct: 196 ALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP 252
Query: 269 GNELQANTSRIVGTYGYMSPEY------ALEGIFSIKSDVFSFGVLLLEIVSG 315
G +L+ + GT GY++PE + + D+++ GV+L +++G
Sbjct: 253 GEKLR----ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 26/226 (11%)
Query: 117 FSDTNKLGEGGFGPVYKGV--LRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKVQ 169
+++ + +GEG +G V L K +A+K++S Q LRE+K ++ + +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYXQRTLREIK----ILLRFR 83
Query: 170 HKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
H+N++ + I++ + + I + + D + T+ + D + + I +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQILR 139
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTYG 284
GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 140 GLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 285 YMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 26/226 (11%)
Query: 117 FSDTNKLGEGGFGPVYKGV--LRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKVQ 169
+++ + +GEG +G V L K +A+K++S Q LRE+K ++ + +
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIK----ILLRFR 77
Query: 170 HKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
H+N++ + I++ + + I + + D + T+ + D + + I +
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQILR 133
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTYG 284
GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 134 GLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 285 YMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 236
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 26/226 (11%)
Query: 117 FSDTNKLGEGGFGPVYKGV--LRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKVQ 169
+++ + +GEG +G V L K +A+K++S Q LRE+K ++ + +
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIK----ILLRFR 77
Query: 170 HKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
H+N++ + I++ + + I + + D + T+ + D + + I +
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQILR 133
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTYG 284
GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 134 GLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 285 YMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 236
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 137/281 (48%), Gaps = 45/281 (16%)
Query: 122 KLGEGGFGPVYK-GVLRKGDEIAVKRLSG--RSEQGLREMKNEASVIAKVQHKNLVRLLG 178
+LG G +G V K + G +AVKR+ S++ R + + + V V G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 179 CCIDKDEKILIYEYMPNKSLDFF---LFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
+ + + E M + SLD F + D + I D + ++ + I + L +LH S+
Sbjct: 118 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAV--SIVKALEHLH--SK 172
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI-VGTYGYMSPEYALEG 294
+ +IHRD+K SN+L++ K+ DFG++ G + + I G YM+PE
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGIS----GYLVDSVAKTIDAGCKPYMAPERINPE 228
Query: 295 I----FSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTS--NRTLELIDD 348
+ +S+KSD++S G+ ++E L +L + +D W + + +++++
Sbjct: 229 LNQKGYSVKSDIWSLGITMIE---------------LAILRFPYDSWGTPFQQLKQVVEE 273
Query: 349 PVLE---DEYSSKQVLLRYVNIALLCVQESADDRPTMNDVV 386
P + D++S++ +V+ C+++++ +RPT +++
Sbjct: 274 PSPQLPADKFSAE-----FVDFTSQCLKKNSKERPTYPELM 309
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 110 VSTATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVK---RLSGRSEQGLREMKNEASVI 165
V DT LG G FG V G + G ++AVK R RS + ++K E +
Sbjct: 8 VKIGHYVLGDT--LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL 65
Query: 166 AKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
+H ++++L + ++ EY+ L ++ K ++ + ++ + I
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI---CKHGRVEEMEARRLFQQILS 122
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGY 285
+ Y H++ ++HRDLK N+LLD MN KI+DFG++ + E + G+ Y
Sbjct: 123 AVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNY 176
Query: 286 MSPEYALEGIFS-IKSDVFSFGVLLLEIVSG 315
+PE +++ + D++S GV+L ++ G
Sbjct: 177 AAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKVQH 170
+ F LG+G FG VY ++ I ++ +S+ +G+ +++ E + + ++H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
N++R+ D+ L+ E+ P L L K D +E +A L Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYC 130
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGYMS 287
H+ ++IHRD+K N+L+ KI+DFG + + A + R + GT Y+
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLP 180
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSG 315
PE K D++ GVL E + G
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 28/227 (12%)
Query: 117 FSDTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKV 168
+++ + +GEG +G V Y V + +A+K++S Q LRE+K ++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIK----ILLAF 80
Query: 169 QHKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIA 224
+H+N++ + I++ + + I + + D + T+ + D + + I
Sbjct: 81 RHENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQIL 136
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTY 283
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 284 GYMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 240
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
+F SV +TF+ + +G G G V Y +L + +A+K+LS +++
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTH 66
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDPT 206
+ E ++ V HKN++ LL + P KSL+ F L D
Sbjct: 67 AKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 207 K----RILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+AR G + + +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 172 LARTAGTSFMM--EPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNLVRLL 177
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G I ++ +I E L FL ++ LD + + ++ L YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYALEGIF 296
+HRD+ A N+L+ + K+ DFG++R + +A+ ++ +M+PE F
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 189
Query: 297 SIKSDVFSFGVLLLEIV 313
+ SDV+ FGV + EI+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNLVRLL 177
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G I ++ +I E L FL ++ LD + + ++ L YL R
Sbjct: 106 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLES---KR 159
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYALEGIF 296
+HRD+ A N+L+ + K+ DFG++R + +A+ ++ +M+PE F
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 217
Query: 297 SIKSDVFSFGVLLLEIV 313
+ SDV+ FGV + EI+
Sbjct: 218 TSASDVWMFGVCMWEIL 234
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+LG G FG V++ R G+ A K + E ++ E ++ ++H LV L
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
D +E ++IYE+M L + D ++ D V+ + + +GL ++H+ + +H
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHENN---YVH 172
Query: 241 RDLKASNILL--DKDMNPKISDFGM-ARICGGNELQANTSRIVGTYGYMSPEYALEGIFS 297
DLK NI+ + K+ DFG+ A + ++ T GT + +PE A
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEVAEGKPVG 228
Query: 298 IKSDVFSFGVLLLEIVSG 315
+D++S GVL ++SG
Sbjct: 229 YYTDMWSVGVLSYILLSG 246
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DF +AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNLVRLL 177
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G I ++ +I E L FL ++ LD + + ++ L YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYALEGIF 296
+HRD+ A N+L+ + K+ DFG++R + +A+ ++ +M+PE F
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 189
Query: 297 SIKSDVFSFGVLLLEIV 313
+ SDV+ FGV + EI+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L+E++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY P + F +RI + AQ +L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+++D+ +++DFG+A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 20/214 (9%)
Query: 111 STATNT-----FSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMK---NE 161
S A NT F LG G FG V ++ G+ A+K L + L++++ NE
Sbjct: 25 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 84
Query: 162 ASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
++ V LV+L D ++ EY+P + F +RI +
Sbjct: 85 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFY- 139
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG 281
AQ +L + +I+RDLK N+L+D+ +++DFG A+ G T + G
Sbjct: 140 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 193
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
T Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 18/217 (8%)
Query: 105 FSFSSVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEI--AVKRLSGRSEQGLREMKNEA 162
F S+ ++ N +G G +G V K ++KG I A K++ + + K E
Sbjct: 16 FQGSTKGDINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEI 74
Query: 163 SVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG 222
++ + H N++RL D + L+ E L F KR+ + +I++
Sbjct: 75 EIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRE-SDAARIMKD 131
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILL--DKDMNP-KISDFGM-ARICGGNELQANTSR 278
+ + Y H ++ + HRDLK N L D +P K+ DFG+ AR G ++
Sbjct: 132 VLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK--- 185
Query: 279 IVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
VGT Y+SP+ LEG++ + D +S GV++ ++ G
Sbjct: 186 -VGTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNLVRLL 177
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G I ++ +I E L FL ++ LD + + ++ L YL R
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYALEGIF 296
+HRD+ A N+L+ + K+ DFG++R + +A+ ++ +M+PE F
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 569
Query: 297 SIKSDVFSFGVLLLEIV 313
+ SDV+ FGV + EI+
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+LG G FG V++ R G+ A K + E ++ E ++ ++H LV L
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
D +E ++IYE+M L + D ++ D V+ + + +GL ++H+ + +H
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHENN---YVH 278
Query: 241 RDLKASNILL--DKDMNPKISDFGM-ARICGGNELQANTSRIVGTYGYMSPEYALEGIFS 297
DLK NI+ + K+ DFG+ A + ++ T GT + +PE A
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEVAEGKPVG 334
Query: 298 IKSDVFSFGVLLLEIVSG 315
+D++S GVL ++SG
Sbjct: 335 YYTDMWSVGVLSYILLSG 352
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKVQH 170
+ F LG+G FG VY ++ I ++ +S+ +G+ +++ E + + ++H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
N++R+ D+ L+ E+ P L L K D +E +A L Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYC 130
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGYMS 287
H+ ++IHRD+K N+L+ KI+DFG + + A + R + GT Y+
Sbjct: 131 HE---RKVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLP 180
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSG 315
PE K D++ GVL E + G
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNLVRLL 177
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G I ++ +I E L FL ++ LD + + ++ L YL R
Sbjct: 80 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 133
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYALEGIF 296
+HRD+ A N+L+ + K+ DFG++R + +A+ ++ +M+PE F
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 191
Query: 297 SIKSDVFSFGVLLLEIV 313
+ SDV+ FGV + EI+
Sbjct: 192 TSASDVWMFGVCMWEIL 208
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY+P + F +RI + AQ +L
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFY--AAQIVLTF 155
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+L+D+ +++DFG A+ G T + GT Y++PE
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 210
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY+P + F +RI + AQ +L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+L+D+ +++DFG A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY P + F +RI + AQ +L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+++D+ K++DFG A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 28/227 (12%)
Query: 117 FSDTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKV 168
+++ + +GEG +G V Y V + +A+K++S Q LRE+K ++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKV--RVAIKKISPFEHQTYCQRTLREIK----ILLAF 80
Query: 169 QHKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIA 224
+H+N++ + I++ + + I + + D + T+ + D + + I
Sbjct: 81 RHENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQIL 136
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTY 283
+GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 284 GYMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 240
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY+P + F +RI + AQ +L
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPHARFYAAQIVLTF 140
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+L+D+ +++DFG A+ G T + GT Y++PE
Sbjct: 141 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEYLAPEI 195
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 196 ILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSE---QGL-REMKNEASVIAKVQH 170
+ F LG+G FG VY ++ I ++ +S+ +G+ +++ E + + ++H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
N++R+ D+ L+ E+ P L L K D +E +A L Y
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYC 131
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR---IVGTYGYMS 287
H+ ++IHRD+K N+L+ KI+DFG + + A + R + GT Y+
Sbjct: 132 HER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGTLDYLP 181
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSG 315
PE K D++ GVL E + G
Sbjct: 182 PEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNLVRLL 177
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G I ++ +I E L FL ++ LD + + ++ L YL R
Sbjct: 83 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 136
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYALEGIF 296
+HRD+ A N+L+ + K+ DFG++R + +A+ ++ +M+PE F
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 194
Query: 297 SIKSDVFSFGVLLLEIV 313
+ SDV+ FGV + EI+
Sbjct: 195 TSASDVWMFGVCMWEIL 211
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 26/226 (11%)
Query: 117 FSDTNKLGEGGFGPVYKGV--LRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKVQ 169
+++ + +GEG +G V L K +A+K++S Q LRE+K ++ + +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIK----ILLRFR 83
Query: 170 HKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
H+N++ + I++ + + I + + D + T+ + D + + I +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQILR 139
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTYG 284
GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + V T
Sbjct: 140 GLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 285 YMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 26/226 (11%)
Query: 117 FSDTNKLGEGGFGPVYKGV--LRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKVQ 169
+++ + +GEG +G V L K +A+K++S Q LRE+K ++ + +
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIK----ILLRFR 84
Query: 170 HKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
H+N++ + I++ + + I + + D + T+ + D + + I +
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQILR 140
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTYG 284
GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + V T
Sbjct: 141 GLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 285 YMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 243
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNLVRLL 177
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G I ++ +I E L FL ++ LD + + ++ L YL R
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 128
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYALEGIF 296
+HRD+ A N+L+ + K+ DFG++R + +A+ ++ +M+PE F
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 186
Query: 297 SIKSDVFSFGVLLLEIV 313
+ SDV+ FGV + EI+
Sbjct: 187 TSASDVWMFGVCMWEIL 203
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY+P + F +RI + AQ +L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+L+D+ +++DFG A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 123 LGEGGFGPVYKGVLRK------GDEIAVKRLSG----RSEQGLREMKNEASVIAKVQHKN 172
LG+GG+G V++ +RK G A+K L R+ + K E +++ +V+H
Sbjct: 25 LGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
+V L+ + LI EY+ L F+ + I ++ + E I+ L +LHQ
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAE-ISMALGHLHQ 139
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMAR--ICGGNELQANTSRIVGTYGYMSPEY 290
II+RDLK NI+L+ + K++DFG+ + I G T GT YM+PE
Sbjct: 140 KG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT----VTHTFCGTIEYMAPEI 192
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
+ + D +S G L+ ++++G
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 26/226 (11%)
Query: 117 FSDTNKLGEGGFGPVYKGV--LRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKVQ 169
+++ + +GEG +G V L K +A++++S Q LRE+K ++ + +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIRKISPFEHQTYCQRTLREIK----ILLRFR 83
Query: 170 HKNLVRL----LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
H+N++ + I++ + + I + + D + T+ + D + + I +
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQHLSNDHI--CYFLYQILR 139
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTYG 284
GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ + + V T
Sbjct: 140 GLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 285 YMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 123 LGEGGFGPVYKGVLRK------GDEIAVKRLSG----RSEQGLREMKNEASVIAKVQHKN 172
LG+GG+G V++ +RK G A+K L R+ + K E +++ +V+H
Sbjct: 25 LGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
+V L+ + LI EY+ L F+ + I ++ + E I+ L +LHQ
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAE-ISMALGHLHQ 139
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMAR--ICGGNELQANTSRIVGTYGYMSPEY 290
II+RDLK NI+L+ + K++DFG+ + I G T GT YM+PE
Sbjct: 140 KG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT----VTHXFCGTIEYMAPEI 192
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
+ + D +S G L+ ++++G
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNLVRLL 177
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G I ++ +I E L FL ++ LD + + ++ L YL R
Sbjct: 81 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 134
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYALEGIF 296
+HRD+ A N+L+ + K+ DFG++R + +A+ ++ +M+PE F
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 192
Query: 297 SIKSDVFSFGVLLLEIV 313
+ SDV+ FGV + EI+
Sbjct: 193 TSASDVWMFGVCMWEIL 209
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNLVRLL 177
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G I ++ +I E L FL ++ LD + + ++ L YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYALEGIF 296
+HRD+ A N+L+ K+ DFG++R + +A+ ++ +M+PE F
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 189
Query: 297 SIKSDVFSFGVLLLEIV 313
+ SDV+ FGV + EI+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 20/214 (9%)
Query: 111 STATNT-----FSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMK---NE 161
S A NT F LG G FG V ++ G+ A+K L + L++++ NE
Sbjct: 25 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 84
Query: 162 ASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
++ V LV+L D ++ EY+P + F +RI +
Sbjct: 85 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRI--GRFSEPHARF 138
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG 281
AQ +L + +I+RDLK N+L+D+ +++DFG A+ G T + G
Sbjct: 139 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 193
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
T Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 54/240 (22%)
Query: 117 FSDTNKLGEGGFGPVYKGV--LRKGDEIAVKRLSGRSEQG-----LREMKNEASVIAKVQ 169
+++ + +GEG +G V L K +A+K++S Q LRE+K ++ + +
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKV-RVAIKKISPFEHQTYCQRTLREIK----ILLRFR 83
Query: 170 HKNLV------------RLLGCCIDKD------EKILIYEYMPNKSLDFFLFDPTKRILL 211
H+N++ ++ I +D K+L +++ N + +FL+
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQ------- 136
Query: 212 DWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNE 271
I +GL Y+H ++HRDLK SN+LL+ + KI DFG+AR+ +
Sbjct: 137 -----------ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182
Query: 272 LQAN-TSRIVGTYGYMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
+ V T Y +PE L KS D++S G +L E++S + G + D LN
Sbjct: 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F +G G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY+P + F +RI + AQ +L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+L+D+ K++DFG A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 106 SFSSVSTATNTFS------DTNKLGEGGFGPV---YKGVLRKGDEIAVKRLSG--RSEQG 154
+F SV +TF+ + +G G G V Y +L + +A+K+LS +++
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTH 66
Query: 155 LREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF--------LFDPT 206
+ E ++ V HKN++ LL + P KSL+ F L D
Sbjct: 67 AKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDAN 114
Query: 207 K----RILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFG 262
++ LD ++ + G+ +LH IIHRDLK SNI++ D KI DFG
Sbjct: 115 LCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 263 MARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+AR G + + +V Y Y +PE L + D++S G ++ E+V K
Sbjct: 172 LARTAGTSFMM--EPEVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNLV 174
F LG G F V + G AVK + ++ +G ++NE +V+ K++H+N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYS 234
L + L+ + + L + + D T +I + + YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST---LIRQVLDAVYYLH--- 137
Query: 235 RVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 291
R+ I+HRDLK N+L D++ ISDFG++++ G ++ S GT GY++PE
Sbjct: 138 RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV---MSTACGTPGYVAPEVL 194
Query: 292 LEGIFSIKSDVFSFGVLLLEIVSG 315
+ +S D +S GV+ ++ G
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY+P + F +RI + AQ +L
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTF 155
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+L+D+ +++DFG A+ G T + GT Y++PE
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 210
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY+P + F +RI + AQ +L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+L+D+ +++DFG A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY+P + F +RI + AQ +L
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTF 155
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+L+D+ +++DFG A+ G T + GT Y++PE
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEYLAPEI 210
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY P + F +RI + AQ +L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+++D+ K++DFG A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 111 STATNT-----FSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMK---NE 161
S A NT F LG G FG V ++ G+ A+K L + L++++ NE
Sbjct: 33 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 162 ASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
++ V LV+L D ++ EY P + F +RI +
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY- 147
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG 281
AQ +L + +I+RDLK N+++D+ K++DFG A+ G T + G
Sbjct: 148 -AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCG 201
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
T Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY+P + F +RI + AQ +L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+L+D+ +++DFG A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY+P + F +RI + AQ +L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+L+D+ +++DFG A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI DFG+ R +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 15/211 (7%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSG-RSEQGLREMKNEASVIAKVQ 169
T + F KLG G FG V+ R G E +K ++ RS+ + +++ E V+ +
Sbjct: 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD 78
Query: 170 HKNLVRLLGCCIDKDEKILIYEYMPNKSL-DFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
H N++++ D ++ E L + + + L ++++ + L
Sbjct: 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALA 138
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNP----KISDFGMARICGGNELQANTSRIVGTYG 284
Y H ++H+DLK NIL +D +P KI DFG+A + +E N + GT
Sbjct: 139 YFHSQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTNAA---GTAL 191
Query: 285 YMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
YM+PE + + K D++S GV++ +++G
Sbjct: 192 YMAPEVFKRDV-TFKCDIWSAGVVMYFLLTG 221
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 20/214 (9%)
Query: 111 STATNT-----FSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMK---NE 161
S A NT F LG G FG V ++ G+ A+K L + L++++ NE
Sbjct: 33 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 162 ASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
++ V LV+L D ++ EY+P + F +RI +
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY- 147
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG 281
AQ +L + +I+RDLK N+L+D+ +++DFG A+ G T + G
Sbjct: 148 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 201
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
T Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 20/214 (9%)
Query: 111 STATNT-----FSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMK---NE 161
S A NT F LG G FG V ++ G+ A+K L + L++++ NE
Sbjct: 33 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 162 ASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
++ V LV+L D ++ EY+P + F +RI +
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY- 147
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG 281
AQ +L + +I+RDLK N+L+D+ +++DFG A+ G T + G
Sbjct: 148 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 201
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
T Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 20/214 (9%)
Query: 111 STATNT-----FSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMK---NE 161
S A NT F LG G FG V ++ G+ A+K L + L++++ NE
Sbjct: 33 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 162 ASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
++ V LV+L D ++ EY+P + F +RI +
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY- 147
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG 281
AQ +L + +I+RDLK N+L+D+ +++DFG A+ G T + G
Sbjct: 148 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCG 201
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
T Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 121 NKLGEGGFGPVYKGVLRKGDEI--AVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
N +G G +G V K ++KG I A K++ + + K E ++ + H N++RL
Sbjct: 15 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
D + L+ E L F KR+ + +I++ + + Y H ++ +
Sbjct: 74 TFEDNTDIYLVMELCTGGEL--FERVVHKRVFRE-SDAARIMKDVLSAVAYCH---KLNV 127
Query: 239 IHRDLKASNILL--DKDMNP-KISDFGM-ARICGGNELQANTSRIVGTYGYMSPEYALEG 294
HRDLK N L D +P K+ DFG+ AR G ++ VGT Y+SP+ LEG
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK----VGTPYYVSPQ-VLEG 182
Query: 295 IFSIKSDVFSFGVLLLEIVSG 315
++ + D +S GV++ ++ G
Sbjct: 183 LYGPECDEWSAGVMMYVLLCG 203
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI FG+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY+P + F +RI + AQ +L
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+L+D+ +++DFG A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 111/243 (45%), Gaps = 38/243 (15%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
F + LG+G FG V K A+K++ +E+ L + +E ++A + H+ +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 176 LLGCCIDKDEKILIYEYMPNKSLDFFLFDPTK-RILLDWVTRV----------QIIEGIA 224
+++ + + KS F + + R L D + ++ I
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR---------------ICGG 269
+ L Y+H IIHRDLK NI +D+ N KI DFG+A+ + G
Sbjct: 127 EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 270 NELQANTSRIVGTYGYMSPEYALEGI--FSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSL 327
++ N + +GT Y++ E L+G ++ K D++S G++ E++ +TG+ R + L
Sbjct: 184 SD---NLTSAIGTAMYVATE-VLDGTGHYNEKIDMYSLGIIFFEMIY-PFSTGMERVNIL 238
Query: 328 NLL 330
L
Sbjct: 239 KKL 241
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY+P + F +RI + AQ +L
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+L+D+ +++DFG A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 123 LGEGGFGPVYKGVLRKGDE----IAVKRLSGRSEQGLRE-MKNEASVIAKVQHKNLVRLL 177
+GEG FG V++G+ + +A+K + +RE EA + + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
G I ++ +I E L FL ++ LD + + ++ L YL R
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPEYALEGIF 296
+HRD+ A N+L+ K+ DFG++R + +A+ ++ +M+PE F
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 569
Query: 297 SIKSDVFSFGVLLLEIV 313
+ SDV+ FGV + EI+
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V ++ G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY+P + F +RI + AQ +L
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+L+D+ +++DFG A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 111 STATNT-----FSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMK---NE 161
S A NT F LG G FG V ++ G+ A+K L + L++++ NE
Sbjct: 53 SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 112
Query: 162 ASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
++ V LV+L D ++ EY+P + F +RI +
Sbjct: 113 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY- 167
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG 281
AQ +L + +I+RDLK N+L+D+ +++DFG A+ ++ T + G
Sbjct: 168 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 221
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
T Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 26/218 (11%)
Query: 117 FSDTNKLGEGGFGPVYKGVLRKGDE-IAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
+ D LG GG G V+ V D+ +A+K++ Q ++ E +I ++ H N+V+
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 176 L--------------LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
+ +G + + ++ EYM + P LL+ R+ + +
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP----LLEEHARLFMYQ 128
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLD-KDMNPKISDFGMARICGGN-ELQANTSRI 279
+ +GL Y+H ++HRDLK +N+ ++ +D+ KI DFG+ARI + + + S
Sbjct: 129 -LLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184
Query: 280 VGTYGYMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGK 316
+ T Y SP L K+ D+++ G + E+++GK
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI D G+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 141/295 (47%), Gaps = 47/295 (15%)
Query: 109 SVSTATNTFSDTNKLGEGGFGPVYK-GVLRKGDEIAVKRLSG--RSEQGLREMKNEASVI 165
S+ + +LG G +G V K + G +AVKR+ S++ R + + +
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM 60
Query: 166 AKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFF---LFDPTKRILLDWVTRVQIIEG 222
V V G + + + E M + SLD F + D + I D + ++ +
Sbjct: 61 RTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAV--S 117
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIV-- 280
I + L +LH S++ +IHRD+K SN+L++ K+ DFG++ L + ++ +
Sbjct: 118 IVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS-----GYLVDDVAKDIDA 170
Query: 281 GTYGYMSPEYALEGI----FSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDL 336
G YM+PE + +S+KSD++S G+ ++E L +L + +D
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE---------------LAILRFPYDS 215
Query: 337 WTS--NRTLELIDDPVLE---DEYSSKQVLLRYVNIALLCVQESADDRPTMNDVV 386
W + + +++++P + D++S++ +V+ C+++++ +RPT +++
Sbjct: 216 WGTPFQQLKQVVEEPSPQLPADKFSAE-----FVDFTSQCLKKNSKERPTYPELM 265
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 114 TNTFSDTNKLGEGGFGPVY------KGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAK 167
++ + KLG G +G V G R I ++ S G + +E +V+ +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSG--ALLDEVAVLKQ 77
Query: 168 VQHKNLVRLLGCCIDKDEKILIYE-YMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQG 226
+ H N+++L DK L+ E Y + D + R V I++ + G
Sbjct: 78 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL----RQKFSEVDAAVIMKQVLSG 133
Query: 227 LLYLHQYSRVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNELQANTSRIVGTY 283
YLH+++ I+HRDLK N+LL+ +D KI DFG++ E+ +GT
Sbjct: 134 TTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLS---AHFEVGGKMKERLGTA 187
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
Y++PE L + K DV+S GV+L ++ G
Sbjct: 188 YYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGT 282
+A+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 283 YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI D G+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGT 282
+A+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 283 YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
L +L D ++ EY P + F +RI + AQ +L
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFY--AAQIVLTF 155
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+++D+ K++DFG A+ G T + GT Y++PE
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 210
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 39/218 (17%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN---EASVIAKVQHKN 172
+ + + +G G +G V + G +AVK+LS R Q + K E ++ ++H+N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSL----DFFLFDPTKRILLDWVTRVQ---------I 219
++ LL + P +SL D +L L+ + + Q +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
I I +GL Y+H IIHRDLK SN+ +++D KI D G+AR +
Sbjct: 131 IYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLAR-----HTDDEMTGY 182
Query: 280 VGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
V T Y +PE L + ++ D++S G ++ E+++G+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
Query: 117 FSDTNKLGEGGFGPVYKGV--LRKGDEIAVKRLSGRSEQGL-REMKNEASVIAKVQHKNL 173
++ +GEG +G V +RK +A+K++S Q + E ++ + +H+N+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRK-TRVAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
+ + + + Y+ ++ L+ K L + I +GL Y+H
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHS- 162
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQAN-TSRIVGTYGYMSPEYAL 292
++HRDLK SN+L++ + KI DFG+ARI + V T Y +PE L
Sbjct: 163 --ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 293 EGIFSIKS-DVFSFGVLLLEIVSGKK-NTGLYRTDSLN 328
KS D++S G +L E++S + G + D LN
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 258
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGT 282
+A+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 283 YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGT 282
+A+G+ +L + + IHRDL A NILL + KI DFG+AR +
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 283 YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVS 314
+M+PE + +++I+SDV+SFGVLL EI S
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 29/207 (14%)
Query: 123 LGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQGL---REMKNEASVIAKVQHKNLVRL 176
+G G +G V Y LR+ ++AVK+LS R Q L R E ++ ++H+N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLS-RPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 177 L-----GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQ-IIEGIAQGLLYL 230
L I+ ++ + + L+ + + L D VQ ++ + +GL Y+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIV---KSQALSD--EHVQFLVYQLLRGLKYI 147
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
H IIHRDLK SN+ +++D +I DFG+AR + + V T Y +PE
Sbjct: 148 HSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEI 199
Query: 291 ALEGI-FSIKSDVFSFGVLLLEIVSGK 316
L + ++ D++S G ++ E++ GK
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY P + F +RI + AQ +L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+++D+ +++DFG A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 43/214 (20%)
Query: 123 LGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQGL---REMKNEASVIAKVQHKNLVRL 176
+G G +G V Y LR+ ++AVK+LS R Q L R E ++ ++H+N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVKKLS-RPFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 177 LGCCIDKDEKILIYEYMPNKSL-DF---FLFDPTKRILLDWVTRVQ---------IIEGI 223
L + P S+ DF +L L+ + + Q ++ +
Sbjct: 85 LDV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL 132
Query: 224 AQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTY 283
+GL Y+H IIHRDLK SN+ +++D +I DFG+AR + + V T
Sbjct: 133 LRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVATR 184
Query: 284 GYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
Y +PE L + ++ D++S G ++ E++ GK
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 111 STATNT-----FSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMK---NE 161
S A NT F LG G FG V ++ G+ A+K L + L++++ NE
Sbjct: 33 SPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 162 ASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
+ V LV+L D ++ EY P + F +RI +
Sbjct: 93 KRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM----FSHLRRIGRFSEPHARFY- 147
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG 281
AQ +L + +I+RDLK N+L+D+ K++DFG A+ G T + G
Sbjct: 148 -AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCG 201
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
T Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 19/178 (10%)
Query: 147 LSGRSEQGLREMK-NEASVIAKVQ-HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD 204
S Q LRE E ++ KV H N+++L L+++ M L +L
Sbjct: 58 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-- 115
Query: 205 PTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA 264
T+++ L +I+ + + + LH ++ I+HRDLK NILLD DMN K++DFG +
Sbjct: 116 -TEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
Query: 265 -RICGGNELQANTSRIVGTYGYMSPEYALEGI------FSIKSDVFSFGVLLLEIVSG 315
++ G +L++ + GT Y++PE + + + D++S GV++ +++G
Sbjct: 172 CQLDPGEKLRS----VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
L +L D ++ EY P + F +RI + AQ +L
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTF 155
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+++D+ K++DFG A+ G T + GT Y++PE
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 210
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGV-LRKGDEIAVK-----RLSGRSEQGLREMKNEASVI 165
+ T+ + +LG+G F V + + + G E A K +LS R Q L + EA +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKL---EREARIC 57
Query: 166 AKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
++H N+VRL ++ L+++ + L D R I+ I +
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILE 114
Query: 226 GLLYLHQYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRIVGT 282
+ + H I+HRDLK N+LL K K++DFG+A G+ Q GT
Sbjct: 115 SVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD--QQAWFGFAGT 169
Query: 283 YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
GY+SPE + + D+++ GV+L ++ G
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
L +L D ++ EY P + F +RI + AQ +L
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTF 155
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+++D+ K++DFG A+ G T + GT Y++PE
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 210
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 23/212 (10%)
Query: 114 TNTFSDTNKLGEGGFGPVY------KGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAK 167
++ + KLG G +G V G R I ++ S G + +E +V+ +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGA--LLDEVAVLKQ 60
Query: 168 VQHKNLVRLLGCCIDKDEKILIYE-YMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQG 226
+ H N+++L DK L+ E Y + D + R V I++ + G
Sbjct: 61 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL----RQKFSEVDAAVIMKQVLSG 116
Query: 227 LLYLHQYSRVRIIHRDLKASNILLD---KDMNPKISDFGMARICGGNELQANTSRIVGTY 283
YLH+++ I+HRDLK N+LL+ +D KI DFG++ E+ +GT
Sbjct: 117 TTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLS---AHFEVGGKMKERLGTA 170
Query: 284 GYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
Y++PE L + K DV+S GV+L ++ G
Sbjct: 171 YYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 112 TATNTFSDTNKLGEGGFGPVYKGV-LRKGDEIAVK-----RLSGRSEQGLREMKNEASVI 165
+ T+ + +LG+G F V + + + G E A K +LS R Q L + EA +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKL---EREARIC 57
Query: 166 AKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
++H N+VRL ++ L+++ + L D R I+ I +
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILE 114
Query: 226 GLLYLHQYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRIVGT 282
+ + H I+HRDLK N+LL K K++DFG+A G+ Q GT
Sbjct: 115 SVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD--QQAWFGFAGT 169
Query: 283 YGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
GY+SPE + + D+++ GV+L ++ G
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+LG G FG V++ V + G K ++ +KNE S++ ++ H L+ L
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLD--WVTRVQIIEGIAQ---GLLYLHQYSR 235
DK E +LI E++ LFD RI + ++ ++I + Q GL ++H++S
Sbjct: 118 EDKYEMVLILEFLSGGE----LFD---RIAAEDYKMSEAEVINYMRQACEGLKHMHEHS- 169
Query: 236 VRIIHRDLKASNILLD--KDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALE 293
I+H D+K NI+ + K + KI DFG+A +E+ T+ T + +PE
Sbjct: 170 --IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDR 224
Query: 294 GIFSIKSDVFSFGVLLLEIVSG 315
+D+++ GVL ++SG
Sbjct: 225 EPVGFYTDMWAIGVLGYVLLSG 246
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 19/178 (10%)
Query: 147 LSGRSEQGLREMK-NEASVIAKVQ-HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD 204
S Q LRE E ++ KV H N+++L L+++ M L +L
Sbjct: 58 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-- 115
Query: 205 PTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA 264
T+++ L +I+ + + + LH ++ I+HRDLK NILLD DMN K++DFG +
Sbjct: 116 -TEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
Query: 265 -RICGGNELQANTSRIVGTYGYMSPEYALEGI------FSIKSDVFSFGVLLLEIVSG 315
++ G +L+ + GT Y++PE + + + D++S GV++ +++G
Sbjct: 172 CQLDPGEKLR----EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 7/95 (7%)
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR-IVG 281
I+ GL +LH+ II+RDLK N++LD + + KI+DFGM C + + T+R G
Sbjct: 129 ISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGM---CKEHMMDGVTTREFCG 182
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
T Y++PE + D +++GVLL E+++G+
Sbjct: 183 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 43/214 (20%)
Query: 123 LGEGGFGPV---YKGVLRKGDEIAVKRLSGRSEQGL---REMKNEASVIAKVQHKNLVRL 176
+G G +G V Y LR+ ++AVK+LS R Q L R E ++ ++H+N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLS-RPFQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 177 LGCCIDKDEKILIYEYMPNKSL-DF---FLFDPTKRILLDWVTRVQ---------IIEGI 223
L + P S+ DF +L L+ + + Q ++ +
Sbjct: 93 LDV------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL 140
Query: 224 AQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTY 283
+GL Y+H IIHRDLK SN+ +++D +I DFG+AR + + V T
Sbjct: 141 LRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATR 192
Query: 284 GYMSPEYALEGI-FSIKSDVFSFGVLLLEIVSGK 316
Y +PE L + ++ D++S G ++ E++ GK
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRK---GDEIAVKRLSGR---SEQGLREMKNEASVIAKV 168
N F LG+G FG V ++R+ G A+K L ++ + E+ V+
Sbjct: 5 NDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H L L D + EY L F L +R+ + R E I L
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAE-IVSALE 119
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
YLH +++RD+K N++LDKD + KI+DFG+ + G A GT Y++P
Sbjct: 120 YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAP 174
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGK 316
E + + D + GV++ E++ G+
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 19/178 (10%)
Query: 147 LSGRSEQGLREMK-NEASVIAKVQ-HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFD 204
S Q LRE E ++ KV H N+++L L+++ M L +L
Sbjct: 45 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-- 102
Query: 205 PTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMA 264
T+++ L +I+ + + + LH ++ I+HRDLK NILLD DMN K++DFG +
Sbjct: 103 -TEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 158
Query: 265 -RICGGNELQANTSRIVGTYGYMSPEYALEGI------FSIKSDVFSFGVLLLEIVSG 315
++ G +L+ + GT Y++PE + + + D++S GV++ +++G
Sbjct: 159 CQLDPGEKLR----EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 46/247 (18%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
F + LG+G FG V K A+K++ +E+ L + +E ++A + H+ +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 176 LLGCCID-------------KDEKILIYEYMPNKSLDFFLFDPTKRILLD--WVTRVQII 220
++ K + EY N +L + D W QI+
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 221 EGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR--------------- 265
E ++ Y+H IIHRDLK NI +D+ N KI DFG+A+
Sbjct: 127 EALS----YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 266 ICGGNELQANTSRIVGTYGYMSPEYALEGI--FSIKSDVFSFGVLLLEIVSGKKNTGLYR 323
+ G ++ N + +GT Y++ E L+G ++ K D++S G++ E++ +TG+ R
Sbjct: 180 LPGSSD---NLTSAIGTAMYVATE-VLDGTGHYNEKIDMYSLGIIFFEMIY-PFSTGMER 234
Query: 324 TDSLNLL 330
+ L L
Sbjct: 235 VNILKKL 241
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLR------EMKNEASVIAKVQHKNLV 174
+LG G F V K + G E A K + R + R E++ E S++ +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYS 234
L ++ + +LI E + L FL ++ L I+ I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 235 RVRIIHRDLKASNI-LLDKDM---NPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPE 289
+I H DLK NI LLDK++ + K+ DFG+A I G E + I GT +++PE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAPE 188
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSG 315
+++D++S GV+ ++SG
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRK---GDEIAVKRLSGR---SEQGLREMKNEASVIAKV 168
N F LG+G FG V ++R+ G A+K L ++ + E+ V+
Sbjct: 10 NDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 67
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H L L D + EY L F L +R+ + R E I L
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAE-IVSALE 124
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
YLH +++RD+K N++LDKD + KI+DFG+ + G A GT Y++P
Sbjct: 125 YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAP 179
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGK 316
E + + D + GV++ E++ G+
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRK---GDEIAVKRLSGR---SEQGLREMKNEASVIAKV 168
N F LG+G FG V ++R+ G A+K L ++ + E+ V+
Sbjct: 5 NDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H L L D + EY L F L +R+ + R E I L
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAE-IVSALE 119
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
YLH +++RD+K N++LDKD + KI+DFG+ + G A GT Y++P
Sbjct: 120 YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAP 174
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGK 316
E + + D + GV++ E++ G+
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRK---GDEIAVKRLSGR---SEQGLREMKNEASVIAKV 168
N F LG+G FG V ++R+ G A+K L ++ + E+ V+
Sbjct: 5 NDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H L L D + EY L F L +R+ + R E I L
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAE-IVSALE 119
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
YLH +++RD+K N++LDKD + KI+DFG+ + G A GT Y++P
Sbjct: 120 YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAP 174
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGK 316
E + + D + GV++ E++ G+
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLR------EMKNEASVIAKVQHKNLV 174
+LG G F V K + G E A K + R + R E++ E S++ +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYS 234
L ++ + +LI E + L FL ++ L I+ I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 235 RVRIIHRDLKASNI-LLDKDM---NPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPE 289
+I H DLK NI LLDK++ + K+ DFG+A I G E + I GT +++PE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAPE 188
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSG 315
+++D++S GV+ ++SG
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 16/215 (7%)
Query: 108 SSVSTATNTFSDTNKLGEGGFGPVYKGVLRK---GDEIAVKRLSGR---SEQGLREMKNE 161
+ N F LG+G FG V ++R+ G A+K L ++ + E
Sbjct: 1 ARAKVTMNDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTE 58
Query: 162 ASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
+ V+ +H L L D + EY L F L +R+ + R E
Sbjct: 59 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAE 116
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVG 281
I L YLH +++RD+K N++LDKD + KI+DFG+ + G A G
Sbjct: 117 -IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCG 170
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
T Y++PE + + D + GV++ E++ G+
Sbjct: 171 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 107 FSSVSTATNTFSDTNK-LGEGGFGPVYKGVLRK-GDEIAVKRLSGRSE-QGLR-EMKNEA 162
F S+ N + T+K LG G F V + + + G E A K L R Q R E+ +E
Sbjct: 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEI 79
Query: 163 SVIAKVQH-KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
+V+ + ++ L + E ILI EY + F L P ++ +++I+
Sbjct: 80 AVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEI-FSLCLPELAEMVSENDVIRLIK 138
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNP----KISDFGMARICGGNELQANTS 277
I +G+ YLHQ + I+H DLK NILL + P KI DFGM+R G
Sbjct: 139 QILEGVYYLHQNN---IVHLDLKPQNILL-SSIYPLGDIKIVDFGMSRKIGH---ACELR 191
Query: 278 RIVGTYGYMSPEYALEGIFSIKSDVFSFGVL 308
I+GT Y++PE + +D+++ G++
Sbjct: 192 EIMGTPEYLAPEILNYDPITTATDMWNIGII 222
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRK---GDEIAVKRLSGR---SEQGLREMKNEASVIAKV 168
N F LG+G FG V ++R+ G A+K L ++ + E+ V+
Sbjct: 5 NDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H L L D + EY L F L +R+ + R E I L
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAE-IVSALE 119
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
YLH +++RD+K N++LDKD + KI+DFG+ + G A GT Y++P
Sbjct: 120 YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAP 174
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGK 316
E + + D + GV++ E++ G+
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLR------EMKNEASVIAKVQHKNLV 174
+LG G F V K + G E A K + R + R E++ E S++ +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYS 234
L ++ + +LI E + L FL ++ L I+ I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 235 RVRIIHRDLKASNI-LLDKDM---NPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPE 289
+I H DLK NI LLDK++ + K+ DFG+A I G E + I GT +++PE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAPE 188
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSG 315
+++D++S GV+ ++SG
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLR------EMKNEASVIAKVQHKNLV 174
+LG G F V K + G E A K + R + R E++ E S++ +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYS 234
L ++ + +LI E + L FL ++ L I+ I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 235 RVRIIHRDLKASNI-LLDKDM---NPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPE 289
+I H DLK NI LLDK++ + K+ DFG+A I G E + I GT +++PE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAPE 188
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSG 315
+++D++S GV+ ++SG
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 122 KLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLR------EMKNEASVIAKVQHKNLV 174
+LG G F V K + G E A K + R + R E++ E S++ +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYS 234
L ++ + +LI E + L FL ++ L I+ I G+ YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 235 RVRIIHRDLKASNI-LLDKDM---NPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSPE 289
+I H DLK NI LLDK++ + K+ DFG+A I G E + I GT +++PE
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAPE 188
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSG 315
+++D++S GV+ ++SG
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRK---GDEIAVKRLSGR---SEQGLREMKNEASVIAKV 168
N F LG+G FG V ++R+ G A+K L ++ + E+ V+
Sbjct: 5 NDFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 169 QHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLL 228
+H L L D + EY L F L +R+ + R E I L
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAE-IVSALE 119
Query: 229 YLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSP 288
YLH +++RD+K N++LDKD + KI+DFG+ + G A GT Y++P
Sbjct: 120 YLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAP 174
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSGK 316
E + + D + GV++ E++ G+
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 116 TFSDTNKLGEGGFGPVYKGVLR-KGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLV 174
TF LG G F V+ R G A+K + ++NE +V+ K++H+N+V
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 175 RLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQ----IIEGIAQGLLYL 230
L L+ + + L FD RIL V + +I+ + + YL
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGEL----FD---RILERGVYTEKDASLVIQQVLSAVKYL 122
Query: 231 HQYSRVRIIHRDLKASNIL-LDKDMNPKI--SDFGMARICGGNELQANTSRIVGTYGYMS 287
H+ I+HRDLK N+L L + N KI +DFG++++ E S GT GY++
Sbjct: 123 HENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVA 175
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSG 315
PE + +S D +S GV+ ++ G
Sbjct: 176 PEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRK----GDEIAVKRLSGR---SEQGLREMKNEASVIAK 167
N F LG+G FG V +L K G A+K L ++ + E V+
Sbjct: 10 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 168 VQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGL 227
+H L L D + EY L F L +R+ + R E I L
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAE-IVSAL 123
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMS 287
YLH S +++RDLK N++LDKD + KI+DFG+ + G + A GT Y++
Sbjct: 124 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLA 179
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
PE + + D + GV++ E++ G+
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 123 LGEGGFGPVYKGV-LRKGDEIAVKRLSGRS-EQGLREMKNEASVIAKVQHKNLVRLLGCC 180
+G GGF V + G+ +A+K + + L +K E + ++H+++ +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++ ++ EY P L F + ++ L + TRV + I + Y+H H
Sbjct: 78 ETANKIFMVLEYCPGGEL--FDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQGYA---H 131
Query: 241 RDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEG--IFSI 298
RDLK N+L D+ K+ DFG+ GN+ + G+ Y +PE ++G
Sbjct: 132 RDLKPENLLFDEYHKLKLIDFGLCAKPKGNK-DYHLQTCCGSLAYAAPE-LIQGKSYLGS 189
Query: 299 KSDVFSFGVLLLEIVSG 315
++DV+S G+LL ++ G
Sbjct: 190 EADVWSMGILLYVLMCG 206
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 28/205 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLSGRSEQGLR-EMKNEASVIAKVQHKNLVRLLGCC 180
LG G F V ++ + +A+K ++ ++ +G M+NE +V+ K++H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 181 IDKDEKILIYEYMPNKSL-------DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
LI + + L F+ R++ Q+++ + YLH
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF------QVLDAVK----YLHD- 134
Query: 234 SRVRIIHRDLKASNIL---LDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ I+HRDLK N+L LD+D ISDFG++++ + + S GT GY++PE
Sbjct: 135 --LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEV 189
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
+ +S D +S GV+ ++ G
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 121 NKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLR------EMKNEASVIAKVQHKNL 173
+LG G F V K + G E A K + R + R E++ E S++ +V H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 174 VRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
+ L ++ + +LI E + L FL ++ L I+ I G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK 134
Query: 234 SRVRIIHRDLKASNI-LLDKDM---NPKISDFGMAR-ICGGNELQANTSRIVGTYGYMSP 288
+I H DLK NI LLDK++ + K+ DFG+A I G E + I GT +++P
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK----NIFGTPEFVAP 187
Query: 289 EYALEGIFSIKSDVFSFGVLLLEIVSG 315
E +++D++S GV+ ++SG
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRK----GDEIAVKRLSGR---SEQGLREMKNEASVIAK 167
N F LG+G FG V +L K G A+K L ++ + E V+
Sbjct: 8 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 168 VQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGL 227
+H L L D + EY L F L +R+ + R E I L
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAE-IVSAL 121
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMS 287
YLH S +++RDLK N++LDKD + KI+DFG+ + G + A GT Y++
Sbjct: 122 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLA 177
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
PE + + D + GV++ E++ G+
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 33/211 (15%)
Query: 122 KLGEGGFGPVYKGVLRKGD-EIAVKRLSGR--SEQGLREMKNEASVIAKVQHKNLVRLLG 178
++G G F VYKG+ + E+A L R ++ + K EA + +QH N+VR
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 179 C---------CIDKDEKILIYEYMPNKSLDFFL--FDPTK-RILLDWVTRVQIIEGIAQG 226
CI +L+ E + +L +L F K ++L W + I +G
Sbjct: 93 SWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ILKG 141
Query: 227 LLYLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGY 285
L +LH + IIHRDLK NI + KI D G+A + + +A ++GT +
Sbjct: 142 LQFLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VIGTPEF 196
Query: 286 MSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
+PE E + DV++FG LE + +
Sbjct: 197 XAPE-XYEEKYDESVDVYAFGXCXLEXATSE 226
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRK----GDEIAVKRLSGR---SEQGLREMKNEASVIAK 167
N F LG+G FG V +L K G A+K L ++ + E V+
Sbjct: 9 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 168 VQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGL 227
+H L L D + EY L F L +R+ + R E I L
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAE-IVSAL 122
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMS 287
YLH S +++RDLK N++LDKD + KI+DFG+ + G + A GT Y++
Sbjct: 123 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLA 178
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
PE + + D + GV++ E++ G+
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 135 IGRFXEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 193 G-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 15 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 73
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 74 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 129
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 130 IGRFXEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 187
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 188 G-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 135 IGRFXEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 193 G-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 135 IGRFXEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 193 G-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 23/230 (10%)
Query: 93 RSKKKEVDQLPLFSFSSV-STATNTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGR 150
R + E Q P + S S +F ++LG G +G V+K ++ G AVKR
Sbjct: 34 RGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR---- 89
Query: 151 SEQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT-KRI 209
S R K+ A +A+V V CC+ ++ +E L L P+ ++
Sbjct: 90 SMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ---AWEEGGILYLQTELCGPSLQQH 146
Query: 210 LLDW---VTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGM--- 263
W + Q+ + LL L ++H D+K +NI L K+ DFG+
Sbjct: 147 CEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVE 206
Query: 264 ARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIV 313
G E+Q R YM+PE L+G + +DVFS G+ +LE+
Sbjct: 207 LGTAGAGEVQEGDPR------YMAPEL-LQGSYGTAADVFSLGLTILEVA 249
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRK----GDEIAVKRLSGR---SEQGLREMKNEASVIAK 167
N F LG+G FG V +L K G A+K L ++ + E V+
Sbjct: 148 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 168 VQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGL 227
+H L L D + EY L F L +R+ + R E I L
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAE-IVSAL 261
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMS 287
YLH S +++RDLK N++LDKD + KI+DFG+ + G + A GT Y++
Sbjct: 262 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLA 317
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
PE + + D + GV++ E++ G+
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 209 I--LLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARI 266
I + R + I YLH + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 135 IGRFAEPHARFYAAQ-IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 267 CGGNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 191 VKG-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 115 NTFSDTNKLGEGGFGPVYKGVLRK----GDEIAVKRLSGR---SEQGLREMKNEASVIAK 167
N F LG+G FG V +L K G A+K L ++ + E V+
Sbjct: 151 NEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 168 VQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGL 227
+H L L D + EY L F L +R+ + R E I L
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAE-IVSAL 264
Query: 228 LYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMS 287
YLH S +++RDLK N++LDKD + KI+DFG+ + G + A GT Y++
Sbjct: 265 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLA 320
Query: 288 PEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
PE + + D + GV++ E++ G+
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 135 IGRFSEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 193 G-----RTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 41 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 99
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 100 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 155
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 156 IGRFXEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 210
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
++ T + GT Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 211 --RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 135 IGRFSEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 193 G-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 123 LGEGGFGPVYKGVLRKGDE---IAVKRLSGRSEQGLREMKN---EASVIAKVQHKNLVRL 176
+G+G FG V +++K D A+K ++ + E++N E ++ ++H LV L
Sbjct: 23 IGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 177 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRV 236
D+++ ++ + + L + L + + T I + L YL
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDLRYHL---QQNVHFKEETVKLFICELVMALDYLQNQ--- 134
Query: 237 RIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY--ALEG 294
RIIHRD+K NILLD+ + I+DF +A + E Q T + GT YM+PE + +G
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITT--MAGTKPYMAPEMFSSRKG 191
Query: 295 I-FSIKSDVFSFGVLLLEIVSGKK 317
+S D +S GV E++ G++
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 7 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 65
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 66 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 121
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 122 IGRFSEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK 179
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 180 G-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 135 IGRFSEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 193 G-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 21 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 79
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 80 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 135
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 136 IGRFSEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 194 G-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 135 IGRFSEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 193 G-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 135 IGRFSEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 193 G-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 123 LGEGGFGPVYKGVLRK-GDEIAVK-----RLSGRSEQGLREMKNEASVIAKVQHKNLVRL 176
+G+G F V + + R+ G + AVK + + ++K EAS+ ++H ++V L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 177 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQI----IEGIAQGLLYLHQ 232
L +++E+M L F+ KR +V + + I + L Y H
Sbjct: 92 LETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 233 YSRVRIIHRDLKASNILLDKDMNP---KISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
+ IIHRD+K +LL N K+ FG+A G + L A VGT +M+PE
Sbjct: 149 NN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPE 203
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSG 315
+ DV+ GV+L ++SG
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLSGRSEQGLR-EMKNEASVIAKVQHKNLVRLLGCC 180
LG G F V ++ + +A+K ++ + +G M+NE +V+ K++H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 181 IDKDEKILIYEYMPNKSL-------DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
LI + + L F+ R++ Q+++ + YLH
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF------QVLDAVK----YLHD- 134
Query: 234 SRVRIIHRDLKASNIL---LDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ I+HRDLK N+L LD+D ISDFG++++ + + S GT GY++PE
Sbjct: 135 --LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEV 189
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
+ +S D +S GV+ ++ G
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 115 NTFSDTNKLGEGGFGPVY-KGVLRKGDEIAVKRLSGRSEQGLREMK---NEASVIAKVQH 170
+ F LG G FG V + G+ A+K L + L++++ NE ++ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYL 230
LV+L D ++ EY+ + F +RI + AQ +L
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTF 154
Query: 231 HQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ +I+RDLK N+L+D+ +++DFG A+ G T + GT Y++PE
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
L ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 135 IGRFSEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 193 G-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLSGRSEQGLR-EMKNEASVIAKVQHKNLVRLLGCC 180
LG G F V ++ + +A+K ++ + +G M+NE +V+ K++H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 181 IDKDEKILIYEYMPNKSL-------DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
LI + + L F+ R++ Q+++ + YLH
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF------QVLDAVK----YLHD- 134
Query: 234 SRVRIIHRDLKASNIL---LDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ I+HRDLK N+L LD+D ISDFG++++ + + S GT GY++PE
Sbjct: 135 --LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEV 189
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
+ +S D +S GV+ ++ G
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 28/205 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLSGRSEQGLR-EMKNEASVIAKVQHKNLVRLLGCC 180
LG G F V ++ + +A+K ++ + +G M+NE +V+ K++H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 181 IDKDEKILIYEYMPNKSL-------DFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
LI + + L F+ R++ Q+++ + YLH
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF------QVLDAVK----YLHD- 134
Query: 234 SRVRIIHRDLKASNIL---LDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY 290
+ I+HRDLK N+L LD+D ISDFG++++ + + S GT GY++PE
Sbjct: 135 --LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEV 189
Query: 291 ALEGIFSIKSDVFSFGVLLLEIVSG 315
+ +S D +S GV+ ++ G
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 135 IGRFSEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 193 G-----RTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 45/230 (19%)
Query: 117 FSDTNKLGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVR 175
F + LG+G FG V K A+K++ +E+ L + +E ++A + H+ +VR
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNHQYVVR 66
Query: 176 LLGCCID-------------KDEKILIYEYMPNKSLDFFLFDPTKRILLD--WVTRVQII 220
++ K + EY N++L + D W QI+
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 221 EGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR--------------- 265
E ++ Y+H IIHR+LK NI +D+ N KI DFG+A+
Sbjct: 127 EALS----YIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 266 ICGGNELQANTSRIVGTYGYMSPEYALEGI--FSIKSDVFSFGVLLLEIV 313
+ G ++ N + +GT Y++ E L+G ++ K D +S G++ E +
Sbjct: 180 LPGSSD---NLTSAIGTAXYVATE-VLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 123 LGEGGFGPVYKGVLRK-GDEIAVK-----RLSGRSEQGLREMKNEASVIAKVQHKNLVRL 176
+G+G F V + + R+ G + AVK + + ++K EAS+ ++H ++V L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 177 LGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQI----IEGIAQGLLYLHQ 232
L +++E+M L F+ KR +V + + I + L Y H
Sbjct: 94 LETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 150
Query: 233 YSRVRIIHRDLKASNILLDKDMNP---KISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
+ IIHRD+K +LL N K+ FG+A G + L A VGT +M+PE
Sbjct: 151 NN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGTPHFMAPE 205
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSG 315
+ DV+ GV+L ++SG
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 23/226 (10%)
Query: 106 SFSSVSTATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVKRLSG------RSEQGLREM 158
SF + + +G G +G V R G ++A+K++ +++ LRE+
Sbjct: 45 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLREL 104
Query: 159 KNEASVIAKVQHKNLVRL---LGCCIDKDEKILIYEYMPNKSLDFF-LFDPTKRILLDWV 214
K ++ +H N++ + L + E +Y + D + ++ + L+ V
Sbjct: 105 K----ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHV 160
Query: 215 TRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR-IC-GGNEL 272
+ + +GL Y+H ++IHRDLK SN+L++++ KI DFGMAR +C E
Sbjct: 161 R--YFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH 215
Query: 273 QANTSRIVGTYGYMSPEYALE-GIFSIKSDVFSFGVLLLEIVSGKK 317
Q + V T Y +PE L ++ D++S G + E+++ ++
Sbjct: 216 QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 35/231 (15%)
Query: 107 FSSVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVK--RLSGRSEQGLREMKNEASV 164
F S+S +S ++G GG V++ + K A+K L Q L +NE +
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 165 IAKVQHKN--LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG 222
+ K+Q + ++RL I IY M ++D + K+ + W R +
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKN 135
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI--- 279
+ + + +HQ+ I+H DLK +N L+ M K+ DFG+A N++Q +T+ +
Sbjct: 136 MLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKD 186
Query: 280 --VGTYGYMSPEYALEGIFSIKS------------DVFSFGVLLLEIVSGK 316
VGT YM PE A++ + S + DV+S G +L + GK
Sbjct: 187 SQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 41/223 (18%)
Query: 121 NKLGEGGFGPV--YKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLG 178
KLGEGGF V +G L G A+KR+ +Q E + EA + H N++RL+
Sbjct: 35 QKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 179 CCI----DKDEKILIYEYMPNKSLDFFLFDPTKRI--LLDWVTRVQIIE---GIAQGLLY 229
C+ K E L+ + + L++ +R+ +++T QI+ GI +GL
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGT----LWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFG-MARICGGNE-------LQANTSRIVG 281
+H HRDLK +NILL + P + D G M + C E LQ ++
Sbjct: 150 IHAKGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC- 205
Query: 282 TYGYMSPEYALEGIFSIKS--------DVFSFGVLLLEIVSGK 316
T Y +PE +FS++S DV+S G +L ++ G+
Sbjct: 206 TISYRAPE-----LFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 41 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 99
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 100 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 155
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 156 IGRFSEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 210
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
++ T + GT Y++PE L ++ D ++ GVL+ E+ +G
Sbjct: 211 --RVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 98/234 (41%), Gaps = 53/234 (22%)
Query: 108 SSVSTATNTFSDTNKLGEGGFGP-VYKGVLRKGDEIAVKRL-------SGRSEQGLREMK 159
S V +F + LG G G VY+G+ D +AVKR+ + R Q LRE
Sbjct: 17 SVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRD-VAVKRILPECFSFADREVQLLRESD 75
Query: 160 NEASVIAKVQHKNLVRLLGCCIDKDEKI----------LIYEYMPNKSLDFFLFDPTKRI 209
+H N++R C +KD + + EY+ K +P
Sbjct: 76 ---------EHPNVIRYF--CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEP---- 120
Query: 210 LLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILL-----DKDMNPKISDFGMA 264
+ +++ GL +LH + I+HRDLK NIL+ + ISDFG+
Sbjct: 121 -------ITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170
Query: 265 -RICGGNELQANTSRIVGTYGYMSPEYALEGIF---SIKSDVFSFGVLLLEIVS 314
++ G + S + GT G+++PE E + D+FS G + ++S
Sbjct: 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 23/226 (10%)
Query: 106 SFSSVSTATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVKRLSG------RSEQGLREM 158
SF + + +G G +G V R G ++A+K++ +++ LRE+
Sbjct: 46 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLREL 105
Query: 159 KNEASVIAKVQHKNLVRL---LGCCIDKDEKILIYEYMPNKSLDFF-LFDPTKRILLDWV 214
K ++ +H N++ + L + E +Y + D + ++ + L+ V
Sbjct: 106 K----ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHV 161
Query: 215 TRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMAR-IC-GGNEL 272
+ + +GL Y+H ++IHRDLK SN+L++++ KI DFGMAR +C E
Sbjct: 162 R--YFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH 216
Query: 273 QANTSRIVGTYGYMSPEYALE-GIFSIKSDVFSFGVLLLEIVSGKK 317
Q + V T Y +PE L ++ D++S G + E+++ ++
Sbjct: 217 QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 135 IGRFSEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++PE L ++ D ++ GVL+ ++ +G
Sbjct: 193 G-----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR-IVG 281
IA GL +L II+RDLK N++LD + + KI+DFGM C N T++ G
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGM---CKENIWDGVTTKXFCG 504
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
T Y++PE + D ++FGVLL E+++G+
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSR-IVG 281
IA GL +L II+RDLK N++LD + + KI+DFGM C N T++ G
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGM---CKENIWDGVTTKXFCG 183
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSGK 316
T Y++PE + D ++FGVLL E+++G+
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+++D+ +++DFG A+
Sbjct: 135 IGRFSEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK 192
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++PE + ++ D ++ GVL+ E+ +G
Sbjct: 193 G-----RTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 34/230 (14%)
Query: 108 SSVSTATNTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMK---NEAS 163
S ST+ + + ++ LG+G V++G +K GD A+K + S LR + E
Sbjct: 2 GSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFE 59
Query: 164 VIAKVQHKNLVRLLGCCIDKD----EKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQI 219
V+ K+ HKN+V+L I+++ K+LI E+ P SL L +P+ L + +
Sbjct: 60 VLKKLNHKNIVKLF--AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIV 117
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILL----DKDMNPKISDFGMARICGGNELQAN 275
+ + G+ +L + I+HR++K NI+ D K++DFG AR EL+ +
Sbjct: 118 LRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR-----ELEDD 169
Query: 276 TS--RIVGTYGYMSPEYALEGI--------FSIKSDVFSFGVLLLEIVSG 315
+ GT Y+ P+ + + D++S GV +G
Sbjct: 170 EQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 110 VSTATNTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQ--GLREMKNEASVIA 166
V ++ F + LGEG +G V + G+ +A+K++ + LR ++ E ++
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 167 KVQHKNLVRLLG-----CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
+H+N++ + + +E +I E M D + I ++ I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQT--------DLHRVISTQMLSDDHIQY 116
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNEL--------Q 273
I Q L + +IHRDLK SN+L++ + + K+ DFG+ARI + Q
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 274 ANTSRIVGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEI 312
+ + V T Y +PE L +S DV+S G +L E+
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 135 IGRFSEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT Y++P L ++ D ++ GVL+ E+ +G
Sbjct: 193 G-----RTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 110 VSTATNTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQ--GLREMKNEASVIA 166
V ++ F + LGEG +G V + G+ +A+K++ + LR ++ E ++
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 167 KVQHKNLVRLLG-----CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
+H+N++ + + +E +I E M D + I ++ I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQT--------DLHRVISTQMLSDDHIQY 116
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNEL--------Q 273
I Q L + +IHRDLK SN+L++ + + K+ DFG+ARI + Q
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 274 ANTSRIVGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEI 312
+ + V T Y +PE L +S DV+S G +L E+
Sbjct: 177 SGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 34/230 (14%)
Query: 108 SSVSTATNTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQGLREMK---NEAS 163
S ST+ + + ++ LG+G V++G +K GD A+K + S LR + E
Sbjct: 2 GSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS--FLRPVDVQMREFE 59
Query: 164 VIAKVQHKNLVRLLGCCIDKD----EKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQI 219
V+ K+ HKN+V+L I+++ K+LI E+ P SL L +P+ L + +
Sbjct: 60 VLKKLNHKNIVKLF--AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIV 117
Query: 220 IEGIAQGLLYLHQYSRVRIIHRDLKASNILL----DKDMNPKISDFGMARICGGNELQAN 275
+ + G+ +L + I+HR++K NI+ D K++DFG AR EL+ +
Sbjct: 118 LRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR-----ELEDD 169
Query: 276 TS--RIVGTYGYMSPEYALEGI--------FSIKSDVFSFGVLLLEIVSG 315
+ GT Y+ P+ + + D++S GV +G
Sbjct: 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 31/214 (14%)
Query: 114 TNTFSDTNKLGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKNEASVIAKVQHK 171
++ F ++LG G VY+ +KG + A+K L ++ + ++ E V+ ++ H
Sbjct: 52 SDFFEVESELGRGATSIVYR-CKQKGTQKPYALKVLKKTVDKKI--VRTEIGVLLRLSHP 108
Query: 172 NLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDP-------TKRILLDWVTRVQIIEGIA 224
N+++L E L+ E + L FD ++R D V QI+E +A
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGEL----FDRIVEKGYYSERDAADAVK--QILEAVA 162
Query: 225 QGLLYLHQYSRVRIIHRDLKASNILLDK---DMNPKISDFGMARICGGNELQANTSRIVG 281
YLH+ I+HRDLK N+L D KI+DFG+++I E Q + G
Sbjct: 163 ----YLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCG 212
Query: 282 TYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
T GY +PE + + D++S G++ ++ G
Sbjct: 213 TPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 110 VSTATNTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRSEQ--GLREMKNEASVIA 166
V ++ F + LGEG +G V + G+ +A+K++ + LR ++ E ++
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 167 KVQHKNLVRLLG-----CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
+H+N++ + + +E +I E M D + I ++ I
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQT--------DLHRVISTQMLSDDHIQY 116
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNEL--------Q 273
I Q L + +IHRDLK SN+L++ + + K+ DFG+ARI + Q
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 274 ANTSRIVGTYGYMSPEYALEGI-FSIKSDVFSFGVLLLEI 312
+ V T Y +PE L +S DV+S G +L E+
Sbjct: 177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 122 KLGEGGFGPVYKGVLRKGDEIAVKRLSGR--SEQGLREMKNEASVIAKVQHKNLVRLLGC 179
KL E G ++KG +G++I VK L R S + R+ E + H N++ +LG
Sbjct: 17 KLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGA 75
Query: 180 CIDKD--EKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
C LI +MP SL L + T ++D V+ +A+G+ +LH +
Sbjct: 76 CQSPPAPHPTLITHWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFLHTLEPL- 133
Query: 238 IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEY---ALEG 294
I L + ++++D+DM +IS MA + + + + +++PE E
Sbjct: 134 IPRHALNSRSVMIDEDMTARIS---MADV----KFSFQSPGRMYAPAWVAPEALQKKPED 186
Query: 295 IFSIKSDVFSFGVLLLEIVS 314
+D++SF VLL E+V+
Sbjct: 187 TNRRSADMWSFAVLLWELVT 206
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCID 182
+G G FG ++ +E+ + R E+ +K E ++H N+VR +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 183 KDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV--QIIEGIAQGLLYLHQYSRVRIIH 240
++ EY L F R D Q+I G++ Y H +++ H
Sbjct: 87 PTHLAIVMEYASGGEL-FERICNAGRFSEDEARFFFQQLISGVS----YCHA---MQVCH 138
Query: 241 RDLKASNILLDKDMNP--KISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSI 298
RDLK N LLD P KI DFG ++ + L + VGT Y++PE L+ +
Sbjct: 139 RDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 195
Query: 299 K-SDVFSFGVLLLEIVSG 315
K +DV+S GV L ++ G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCID 182
+G G FG ++ +E+ + R E+ +K E ++H N+VR +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 183 KDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV--QIIEGIAQGLLYLHQYSRVRIIH 240
++ EY L F R D Q+I G++ Y H +++ H
Sbjct: 87 PTHLAIVMEYASGGEL-FERICNAGRFSEDEARFFFQQLISGVS----YAHA---MQVAH 138
Query: 241 RDLKASNILLDKDMNP--KISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSI 298
RDLK N LLD P KI+DFG ++ + L + VGT Y++PE L+ +
Sbjct: 139 RDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAYIAPEVLLKKEYDG 195
Query: 299 K-SDVFSFGVLLLEIVSG 315
K +DV+S GV L ++ G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 35/231 (15%)
Query: 107 FSSVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVK--RLSGRSEQGLREMKNEASV 164
F S+S +S ++G GG V++ + K A+K L Q L +NE +
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 165 IAKVQHKN--LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG 222
+ K+Q + ++RL I IY M ++D + K+ + W R +
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKN 135
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI--- 279
+ + + +HQ+ I+H DLK +N L+ M K+ DFG+A N++Q + +
Sbjct: 136 MLEAVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDXXXVVKD 186
Query: 280 --VGTYGYMSPEYALEGIFSIKS------------DVFSFGVLLLEIVSGK 316
VGT YM PE A++ + S + DV+S G +L + GK
Sbjct: 187 SQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 17/227 (7%)
Query: 94 SKKKEVDQLPLFSFSSVSTAT-NTFSDTNKLGEGGFGPVYKGVLRK-GDEIAVKRLSGRS 151
+K KE D L + S +TA + F LG G FG V ++ G+ A+K L +
Sbjct: 20 AKAKE-DFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK 78
Query: 152 EQGLREMK---NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKR 208
L++++ NE ++ V LV+L D ++ EY+ + F +R
Sbjct: 79 VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRR 134
Query: 209 ILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICG 268
I + AQ +L + +I+RDLK N+L+D+ +++DFG A+
Sbjct: 135 IGRFSEPHARFY--AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
Query: 269 GNELQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
G T + GT ++PE L ++ D ++ GVL+ E+ +G
Sbjct: 193 G-----RTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 131/284 (46%), Gaps = 53/284 (18%)
Query: 122 KLGEGGFGPVYKG-VLRKGDEIAVKRLSG--RSEQGLREMKNEASVIAKVQHKNLVRLLG 178
+LG G +G V K + G AVKR+ S++ R + + V V G
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 179 CCIDKDEKILIYEYMPNKSLDFF---LFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
++ + I + + SLD F + D + I D + ++ + I + L +LH S+
Sbjct: 101 ALF-REGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAV--SIVKALEHLH--SK 155
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMA---------RICGGNELQANTSRIVGTYGYM 286
+ +IHRD+K SN+L++ K DFG++ I G + RI
Sbjct: 156 LSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERI------- 208
Query: 287 SPEYALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNLLGYVWDLWTS--NRTLE 344
+PE +G +S+KSD++S G+ +E L +L + +D W + + +
Sbjct: 209 NPELNQKG-YSVKSDIWSLGITXIE---------------LAILRFPYDSWGTPFQQLKQ 252
Query: 345 LIDDPVLE---DEYSSKQVLLRYVNIALLCVQESADDRPTMNDV 385
++++P + D++S++ +V+ C+++++ +RPT ++
Sbjct: 253 VVEEPSPQLPADKFSAE-----FVDFTSQCLKKNSKERPTYPEL 291
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCID 182
+G G FG ++ +E+ + R E+ +K E ++H N+VR +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 183 KDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV--QIIEGIAQGLLYLHQYSRVRIIH 240
++ EY L F R D Q+I G++ Y H +++ H
Sbjct: 86 PTHLAIVMEYASGGEL-FERICNAGRFSEDEARFFFQQLISGVS----YCHA---MQVCH 137
Query: 241 RDLKASNILLDKDMNP--KISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSI 298
RDLK N LLD P KI DFG ++ + L + VGT Y++PE L+ +
Sbjct: 138 RDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 194
Query: 299 K-SDVFSFGVLLLEIVSG 315
K +DV+S GV L ++ G
Sbjct: 195 KVADVWSCGVTLYVMLVG 212
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 35/228 (15%)
Query: 110 VSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVK--RLSGRSEQGLREMKNEASVIAK 167
+S +S ++G GG V++ + K A+K L Q L +NE + + K
Sbjct: 7 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 66
Query: 168 VQHKN--LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
+Q + ++RL I IY M ++D + K+ + W R + + +
Sbjct: 67 LQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLE 122
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI-----V 280
+ +HQ+ I+H DLK +N L+ M K+ DFG+A N++Q +T+ + V
Sbjct: 123 AVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQV 173
Query: 281 GTYGYMSPEYALEGIFSIKS------------DVFSFGVLLLEIVSGK 316
GT YM PE A++ + S + DV+S G +L + GK
Sbjct: 174 GTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLSGRSEQGLREMKNEASVIAKVQ-HKNLVRLLGCC 180
LGEG F K V +K ++ AVK +S R E ++ E + + + H N+V+L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNIVKLHEVF 75
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQ-IIEGIAQGLLYLHQYSRVRII 239
D+ L+ E + L F+ K+ T I+ + + ++H V ++
Sbjct: 76 HDQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMHD---VGVV 128
Query: 240 HRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIF 296
HRDLK N+L + ++ KI DFG AR+ + T T Y +PE + +
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAAPELLNQNGY 186
Query: 297 SIKSDVFSFGVLLLEIVSGK 316
D++S GV+L ++SG+
Sbjct: 187 DESCDLWSLGVILYTMLSGQ 206
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 35/228 (15%)
Query: 110 VSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVK--RLSGRSEQGLREMKNEASVIAK 167
+S +S ++G GG V++ + K A+K L Q L +NE + + K
Sbjct: 3 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 62
Query: 168 VQHKN--LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
+Q + ++RL I IY M ++D + K+ + W R + + +
Sbjct: 63 LQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLE 118
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI-----V 280
+ +HQ+ I+H DLK +N L+ M K+ DFG+A N++Q +T+ + V
Sbjct: 119 AVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQV 169
Query: 281 GTYGYMSPEYALEGIFSIKS------------DVFSFGVLLLEIVSGK 316
GT YM PE A++ + S + DV+S G +L + GK
Sbjct: 170 GTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 35/228 (15%)
Query: 110 VSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVK--RLSGRSEQGLREMKNEASVIAK 167
+S +S ++G GG V++ + K A+K L Q L +NE + + K
Sbjct: 51 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 110
Query: 168 VQHKN--LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
+Q + ++RL I IY M ++D + K+ + W R + + +
Sbjct: 111 LQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLE 166
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI-----V 280
+ +HQ+ I+H DLK +N L+ M K+ DFG+A N++Q +T+ + V
Sbjct: 167 AVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQV 217
Query: 281 GTYGYMSPEYALEGIFSIKS------------DVFSFGVLLLEIVSGK 316
GT YM PE A++ + S + DV+S G +L + GK
Sbjct: 218 GTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 29/218 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLRE----MKNEASVIAKVQHKNLVRLLG 178
+G G FG V + ++ +L + E R E ++A +V+L
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF- 141
Query: 179 CCIDKDEKIL--IYEYMPNKSLDFFL--FDPTKRILLDWVTRVQIIEGIAQGLLYLHQYS 234
C +D+K L + EYMP L + +D ++ W A+ +L L
Sbjct: 142 -CAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK----WAKFY-----TAEVVLALDAIH 191
Query: 235 RVRIIHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPE---- 289
+ +IHRD+K N+LLDK + K++DFG ++ + +T+ VGT Y+SPE
Sbjct: 192 SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA--VGTPDYISPEVLKS 249
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSL 327
+G + + D +S GV L E++ G +T Y DSL
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVG--DTPFY-ADSL 284
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 35/228 (15%)
Query: 110 VSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVK--RLSGRSEQGLREMKNEASVIAK 167
+S +S ++G GG V++ + K A+K L Q L +NE + + K
Sbjct: 4 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 63
Query: 168 VQHKN--LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
+Q + ++RL I IY M ++D + K+ + W R + + +
Sbjct: 64 LQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLE 119
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI-----V 280
+ +HQ+ I+H DLK +N L+ M K+ DFG+A N++Q +T+ + V
Sbjct: 120 AVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQV 170
Query: 281 GTYGYMSPEYALEGIFSIKS------------DVFSFGVLLLEIVSGK 316
GT YM PE A++ + S + DV+S G +L + GK
Sbjct: 171 GTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCID 182
LG G FG V++ V + + + +K E S++ +H+N++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 183 KDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRD 242
+E ++I+E++ LD F T L+ V + + + L +LH ++ I H D
Sbjct: 73 MEELVMIFEFISG--LDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFD 127
Query: 243 LKASNILLD--KDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSIKS 300
++ NI+ + KI +FG AR + N + Y +PE + S +
Sbjct: 128 IRPENIIYQTRRSSTIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTAT 184
Query: 301 DVFSFGVLLLEIVSG 315
D++S G L+ ++SG
Sbjct: 185 DMWSLGTLVYVLLSG 199
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 35/228 (15%)
Query: 110 VSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVK--RLSGRSEQGLREMKNEASVIAK 167
+S +S ++G GG V++ + K A+K L Q L +NE + + K
Sbjct: 51 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 110
Query: 168 VQHKN--LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
+Q + ++RL I IY M ++D + K+ + W R + + +
Sbjct: 111 LQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLE 166
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI-----V 280
+ +HQ+ I+H DLK +N L+ M K+ DFG+A N++Q +T+ + V
Sbjct: 167 AVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQV 217
Query: 281 GTYGYMSPEYALEGIFSIKS------------DVFSFGVLLLEIVSGK 316
GT YM PE A++ + S + DV+S G +L + GK
Sbjct: 218 GTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 28/215 (13%)
Query: 114 TNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVKRLSGR--------SEQGLREMKNEASV 164
+ +S + LG G FG V+ V + K E+ VK + + L ++ E ++
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 165 IAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLF-DPTKRI---LLDWVTRVQII 220
+++V+H N++++L ++ L+ E LD F F D R+ L ++ R Q++
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKH-GSGLDLFAFIDRHPRLDEPLASYIFR-QLV 140
Query: 221 EGIAQGLLYLHQYSRVR-IIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI 279
+ Y R++ IIHRD+K NI++ +D K+ DFG A +L
Sbjct: 141 SAVG--------YLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL---FYTF 189
Query: 280 VGTYGYMSPEYALEGIF-SIKSDVFSFGVLLLEIV 313
GT Y +PE + + + +++S GV L +V
Sbjct: 190 CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 123 LGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQ-HKNLVRLLGCC 180
L EGGF VY+ + G E A+KRL E+ R + E + K+ H N+V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 181 -IDKDE------KILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQY 233
I K+E + L+ + L FL R L T ++I + + ++H+
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR- 154
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMA 264
+ IIHRDLK N+LL K+ DFG A
Sbjct: 155 QKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 27/211 (12%)
Query: 123 LGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQ-HKNLVRLLGCC 180
LGEG V + L E AVK + + + E ++ + Q H+N++ L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++D L++E M S+ L KR + + +++ +A L +LH I H
Sbjct: 81 EEEDRFYLVFEKMRGGSI---LSHIHKRRHFNELEASVVVQDVASALDFLHNKG---IAH 134
Query: 241 RDLKASNILLDK--DMNP-KISDFGMARICGGNELQANTSRI--------VGTYGYMSPE 289
RDLK NIL + ++P KI DFG+ G +L + S I G+ YM+PE
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLG---SGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 290 ----YALEG-IFSIKSDVFSFGVLLLEIVSG 315
++ E I+ + D++S GV+L ++SG
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 33/246 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRL-----SGRSEQGL------REMKNEASVIAKVQHK 171
+ G +G V GV +G +A+KR+ GR+ L + + E ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 172 NLVRLLGCCIDKDEKILIYEYMPNKSL--DFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
N++ L + +E + Y+ + + D +RI++ + I GL
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
LH+ ++HRDL NILL + + I DF +AR + AN + V Y +PE
Sbjct: 150 LHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPE 203
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSL-NLLGYVWDLWTSNRTLELID 347
++ F+ D++S G ++ E+ + K L+R + N L N+ +E++
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRK---ALFRGSTFYNQL---------NKIVEVVG 251
Query: 348 DPVLED 353
P +ED
Sbjct: 252 TPKIED 257
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 42/273 (15%)
Query: 103 PLFSFSSV--STATNTFSDTNKLGEGGFGPVYKGVLRKG-DEIAVKRLSGR--SEQGLRE 157
PL S SV + + + LG G G V RK ++A+K +S R + RE
Sbjct: 2 PLGSHMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE 61
Query: 158 ------MKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT--KRI 209
++ E ++ K+ H ++++ D ++ ++ E M L FD +
Sbjct: 62 ADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKR 116
Query: 210 LLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARI 266
L + ++ + + + YLH+ IIHRDLK N+LL ++D KI+DFG ++I
Sbjct: 117 LKEATCKLYFYQMLL-AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 172
Query: 267 CGGNELQANTSRIVGTYGYMSPEYALE---GIFSIKSDVFSFGVLLLEIVSGKKNTGLYR 323
G L + GT Y++PE + ++ D +S GV+L +SG +R
Sbjct: 173 LGETSLMRT---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 229
Query: 324 TD----------SLNLLGYVWDLWTSNRTLELI 346
T N + VW S + L+L+
Sbjct: 230 TQVSLKDQITSGKYNFIPEVW-AEVSEKALDLV 261
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 33/246 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRL-----SGRSEQGL------REMKNEASVIAKVQHK 171
+ G +G V GV +G +A+KR+ GR+ L + + E ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 172 NLVRLLGCCIDKDEKILIYEYMPNKSL--DFFLFDPTKRILLDWVTRVQIIEGIAQGLLY 229
N++ L + +E + Y+ + + D +RI++ + I GL
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE 289
LH+ ++HRDL NILL + + I DF +AR + AN + V Y +PE
Sbjct: 150 LHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRAPE 203
Query: 290 YALE-GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSL-NLLGYVWDLWTSNRTLELID 347
++ F+ D++S G ++ E+ + K L+R + N L N+ +E++
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRK---ALFRGSTFYNQL---------NKIVEVVG 251
Query: 348 DPVLED 353
P +ED
Sbjct: 252 TPKIED 257
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 29/218 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLRE----MKNEASVIAKVQHKNLVRLLG 178
+G G FG V + ++ +L + E R E ++A +V+L
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG-----IAQGLLYLHQY 233
D ++ EYMP L ++ ++ + E A+ +L L
Sbjct: 137 AFQDDRYLYMVMEYMPGGDL------------VNLMSNYDVPEKWARFYTAEVVLALDAI 184
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE---- 289
+ IHRD+K N+LLDK + K++DFG + E VGT Y+SPE
Sbjct: 185 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKS 243
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSL 327
+G + + D +S GV L E++ G +T Y DSL
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVG--DTPFY-ADSL 278
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 120 TNKLGEGGFGPVYKGVLRKG-DEIAVKRLSGR--SEQGLRE------MKNEASVIAKVQH 170
+ LG G G V RK ++A+K +S R + RE ++ E ++ K+ H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT--KRILLDWVTRVQIIEGIAQGLL 228
++++ D ++ ++ E M L FD + L + ++ + + +
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKLYFYQMLL-AVQ 128
Query: 229 YLHQYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRIVGTYGY 285
YLH+ IIHRDLK N+LL ++D KI+DFG ++I G L + GT Y
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTY 182
Query: 286 MSPEYALE---GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTD----------SLNLLGY 332
++PE + ++ D +S GV+L +SG +RT N +
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 333 VWDLWTSNRTLELI 346
VW S + L+L+
Sbjct: 243 VW-AEVSEKALDLV 255
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 29/218 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLRE----MKNEASVIAKVQHKNLVRLLG 178
+G G FG V + ++ +L + E R E ++A +V+L
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG-----IAQGLLYLHQY 233
D ++ EYMP L ++ ++ + E A+ +L L
Sbjct: 142 AFQDDRYLYMVMEYMPGGDL------------VNLMSNYDVPEKWARFYTAEVVLALDAI 189
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE---- 289
+ IHRD+K N+LLDK + K++DFG + E VGT Y+SPE
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSL 327
+G + + D +S GV L E++ G +T Y DSL
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVG--DTPFY-ADSL 283
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 120 TNKLGEGGFGPVYKGVLRKG-DEIAVKRLSGR--SEQGLRE------MKNEASVIAKVQH 170
+ LG G G V RK ++A+K +S R + RE ++ E ++ K+ H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT--KRILLDWVTRVQIIEGIAQGLL 228
++++ D ++ ++ E M L FD + L + ++ + + +
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKLYFYQMLL-AVQ 128
Query: 229 YLHQYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRIVGTYGY 285
YLH+ IIHRDLK N+LL ++D KI+DFG ++I G L + GT Y
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTY 182
Query: 286 MSPEYALE---GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTD----------SLNLLGY 332
++PE + ++ D +S GV+L +SG +RT N +
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 333 VWDLWTSNRTLELI 346
VW S + L+L+
Sbjct: 243 VW-AEVSEKALDLV 255
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 29/218 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLRE----MKNEASVIAKVQHKNLVRLLG 178
+G G FG V + ++ +L + E R E ++A +V+L
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEG-----IAQGLLYLHQY 233
D ++ EYMP L ++ ++ + E A+ +L L
Sbjct: 142 AFQDDRYLYMVMEYMPGGDL------------VNLMSNYDVPEKWARFYTAEVVLALDAI 189
Query: 234 SRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPE---- 289
+ IHRD+K N+LLDK + K++DFG + E VGT Y+SPE
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 290 YALEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSL 327
+G + + D +S GV L E++ G +T Y DSL
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVG--DTPFY-ADSL 283
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 120 TNKLGEGGFGPVYKGVLRKG-DEIAVKRLSGR--SEQGLRE------MKNEASVIAKVQH 170
+ LG G G V RK ++A+K +S R + RE ++ E ++ K+ H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT--KRILLDWVTRVQIIEGIAQGLL 228
++++ D ++ ++ E M L FD + L + ++ + + +
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKLYFYQMLL-AVQ 128
Query: 229 YLHQYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRIVGTYGY 285
YLH+ IIHRDLK N+LL ++D KI+DFG ++I G L + GT Y
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTY 182
Query: 286 MSPEYALE---GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTD----------SLNLLGY 332
++PE + ++ D +S GV+L +SG +RT N +
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 333 VWDLWTSNRTLELI 346
VW S + L+L+
Sbjct: 243 VW-AEVSEKALDLV 255
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 120 TNKLGEGGFGPVYKGVLRKG-DEIAVKRLSGR--SEQGLRE------MKNEASVIAKVQH 170
+ LG G G V RK ++A+K +S R + RE ++ E ++ K+ H
Sbjct: 14 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 73
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT--KRILLDWVTRVQIIEGIAQGLL 228
++++ D ++ ++ E M L FD + L + ++ + + +
Sbjct: 74 PCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKLYFYQMLL-AVQ 127
Query: 229 YLHQYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRIVGTYGY 285
YLH+ IIHRDLK N+LL ++D KI+DFG ++I G L + GT Y
Sbjct: 128 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTY 181
Query: 286 MSPEYALE---GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTD----------SLNLLGY 332
++PE + ++ D +S GV+L +SG +RT N +
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 241
Query: 333 VWDLWTSNRTLELI 346
VW S + L+L+
Sbjct: 242 VW-AEVSEKALDLV 254
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 57/286 (19%)
Query: 96 KKEVDQLPLFSFSSVSTATNTFSDTNKLGEGGFGPVY--KGVLRKGDE--IAVKRLSGRS 151
KK++++L + +V +N F +K+GEG F VY L+ G E IA+K L S
Sbjct: 6 KKDIEKL----YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS 61
Query: 152 EQGLREMKNEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKS----LDFFLFDPTK 207
+ + +A Q N++ + C D ++ Y+ ++S L+ F +
Sbjct: 62 HPIRIAAELQCLTVAGGQ-DNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVR 120
Query: 208 RILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMAR- 265
+L+ + + L +HQ+ I+HRD+K SN L ++ + + DFG+A+
Sbjct: 121 EYMLN----------LFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167
Query: 266 -------------------ICGGNELQANTSR------IVGTYGYMSPEYALEGIFSIKS 300
C N+ SR GT G+ +PE + +
Sbjct: 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTA 227
Query: 301 -DVFSFGVLLLEIVSGKKNTGLYR-TDSLNLLGYVWDLWTSNRTLE 344
D++S GV+ L ++SG+ Y+ +D L L + + S T++
Sbjct: 228 IDMWSAGVIFLSLLSGR--YPFYKASDDLTALAQIMTIRGSRETIQ 271
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 123 LGEGGFGPVYKGVL------RKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRL 176
LGEG +G V K VL R+ +I K+ R G +K E ++ +++HKN+++L
Sbjct: 13 LGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71
Query: 177 LGCCIDKDEK--ILIYEYMPNKSLDFFLFDPTKRILLDWVTR--VQIIEGIAQGLLYLHQ 232
+ +++++ ++ EY + P KR + Q+I+G L YLH
Sbjct: 72 VDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDG----LEYLHS 127
Query: 233 YSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGTYGYMSPEYA- 291
I+H+D+K N+LL KIS G+A G+ + PE A
Sbjct: 128 QG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIAN 184
Query: 292 -LEGIFSIKSDVFSFGVLLLEIVSGKKNTGLYRTDSLNL 329
L+ K D++S GV L I TGLY + N+
Sbjct: 185 GLDTFSGFKVDIWSAGVTLYNIT-----TGLYPFEGDNI 218
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 16/198 (8%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCID 182
+G G FG ++ +E+ + R E+ +K E ++H N+VR +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 183 KDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV--QIIEGIAQGLLYLHQYSRVRIIH 240
++ EY L F R D Q+I G++ Y H +++ H
Sbjct: 87 PTHLAIVMEYASGGEL-FERICNAGRFSEDEARFFFQQLISGVS----YCHA---MQVCH 138
Query: 241 RDLKASNILLDKDMNP--KISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSI 298
RDLK N LLD P KI FG ++ + L + VGT Y++PE L+ +
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 195
Query: 299 K-SDVFSFGVLLLEIVSG 315
K +DV+S GV L ++ G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 120 TNKLGEGGFGPVYKGVLRKG-DEIAVKRLSGR--SEQGLRE------MKNEASVIAKVQH 170
+ LG G G V RK ++A++ +S R + RE ++ E ++ K+ H
Sbjct: 154 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 213
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT--KRILLDWVTRVQIIEGIAQGLL 228
++++ D ++ ++ E M L FD + L + ++ + + +
Sbjct: 214 PCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKLYFYQMLL-AVQ 267
Query: 229 YLHQYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRIVGTYGY 285
YLH+ IIHRDLK N+LL ++D KI+DFG ++I G L + GT Y
Sbjct: 268 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTY 321
Query: 286 MSPEYALE---GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRT 324
++PE + ++ D +S GV+L +SG +RT
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 363
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 35/228 (15%)
Query: 110 VSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVK--RLSGRSEQGLREMKNEASVIAK 167
+S +S ++G GG V++ + K A+K L Q L +NE + + K
Sbjct: 51 ISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 110
Query: 168 VQHKN--LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQ 225
+Q + ++RL I IY M ++D + K+ + W R + + +
Sbjct: 111 LQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLE 166
Query: 226 GLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRI-----V 280
+ +HQ+ I+H DLK +N L+ M K+ DFG+A N++Q +T+ + V
Sbjct: 167 AVHTIHQHG---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQV 217
Query: 281 GTYGYMSPEYALEGIFSIKS------------DVFSFGVLLLEIVSGK 316
G YM PE A++ + S + DV+S G +L + GK
Sbjct: 218 GAVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 22/201 (10%)
Query: 123 LGEGGFG--PVYKGVLRKGDEIAVK---RLSGRSEQGLREMKNEASVIAKVQHKNLVRLL 177
+G G FG + + L K + +AVK R + E RE+ N S+ +H N+VR
Sbjct: 28 IGSGNFGVARLMRDKLTK-ELVAVKYIERGAAIDENVQREIINHRSL----RHPNIVRFK 82
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVR 237
+ +I EY L + + R D + + G+ Y H ++
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERICN-AGRFSEDEARF--FFQQLLSGVSYCHS---MQ 136
Query: 238 IIHRDLKASNILLDKDMNP--KISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGI 295
I HRDLK N LLD P KI DFG ++ + L + VGT Y++PE L
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLRQE 193
Query: 296 FSIK-SDVFSFGVLLLEIVSG 315
+ K +DV+S GV L ++ G
Sbjct: 194 YDGKIADVWSCGVTLYVMLVG 214
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 32/230 (13%)
Query: 109 SVSTATNTFSDTNKL-----GEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKNEA 162
S + F D KL GEG + V V L+ G E AVK + ++ + E
Sbjct: 2 STDSLPGKFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREV 61
Query: 163 SVIAKVQ-HKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE 221
+ + Q +KN++ L+ D L++E + S+ L K+ + +++
Sbjct: 62 ETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSI---LAHIQKQKHFNEREASRVVR 118
Query: 222 GIAQGLLYLHQYSRVRIIHRDLKASNILLD--KDMNP-KISDFGMARICGGNELQANTSR 278
+A L +LH I HRDLK NIL + + ++P KI DF + G +L + +
Sbjct: 119 DVAAALDFLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLG---SGMKLNNSCTP 172
Query: 279 I--------VGTYGYMSPE----YALEGIFSIK-SDVFSFGVLLLEIVSG 315
I G+ YM+PE + + F K D++S GV+L ++SG
Sbjct: 173 ITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 29/222 (13%)
Query: 120 TNKLGEGGFGPVYKGVLRKG-DEIAVKRLSGR--SEQGLRE------MKNEASVIAKVQH 170
+ LG G G V RK ++A++ +S R + RE ++ E ++ K+ H
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199
Query: 171 KNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPT--KRILLDWVTRVQIIEGIAQGLL 228
++++ D ++ ++ E M L FD + L + ++ + + +
Sbjct: 200 PCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKLYFYQMLL-AVQ 253
Query: 229 YLHQYSRVRIIHRDLKASNILL---DKDMNPKISDFGMARICGGNELQANTSRIVGTYGY 285
YLH+ IIHRDLK N+LL ++D KI+DFG ++I G L + GT Y
Sbjct: 254 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT---LCGTPTY 307
Query: 286 MSPEYALE---GIFSIKSDVFSFGVLLLEIVSGKKNTGLYRT 324
++PE + ++ D +S GV+L +SG +RT
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 349
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 16/198 (8%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQHKNLVRLLGCCID 182
+G G FG ++ +E+ + R E+ +K E ++H N+VR +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 183 KDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV--QIIEGIAQGLLYLHQYSRVRIIH 240
++ EY L F R D Q+I G++ Y H +++ H
Sbjct: 87 PTHLAIVMEYASGGEL-FERICNAGRFSEDEARFFFQQLISGVS----YCHA---MQVCH 138
Query: 241 RDLKASNILLDKDMNP--KISDFGMARICGGNELQANTSRIVGTYGYMSPEYALEGIFSI 298
RDLK N LLD P KI FG ++ + L + VGT Y++PE L+ +
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIAPEVLLKKEYDG 195
Query: 299 K-SDVFSFGVLLLEIVSG 315
K +DV+S GV L ++ G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 49/258 (18%)
Query: 100 DQLPLFSFSSVSTATNTFSDTNKLGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMK 159
D++ FS+ N F K+G+G FG V + ++ ++ R K
Sbjct: 20 DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAK 79
Query: 160 NEASVIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTR--- 216
EA ++ K+Q+ ++ + K + Y++M +F+P L + +TR
Sbjct: 80 IEADILKKIQNDDINNNNI--VKYHGKFMYYDHMC------LIFEPLGPSLYEIITRNNY 131
Query: 217 ---------VQIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARIC 267
+ IE I + L YL + S + H DLK NILLD K S + R+
Sbjct: 132 NGFHIEDIKLYCIE-ILKALNYLRKMS---LTHTDLKPENILLDDPYFEK-SLITVRRVT 186
Query: 268 GGNELQANTSR---------------------IVGTYGYMSPEYALEGIFSIKSDVFSFG 306
G ++Q ++ I+ T Y +PE L + + SD++SFG
Sbjct: 187 DGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFG 246
Query: 307 VLLLEIVSGKKNTGLYRT 324
+L E+ +G + L+RT
Sbjct: 247 CVLAELYTG---SLLFRT 261
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 27/211 (12%)
Query: 123 LGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKNEASVIAKVQ-HKNLVRLLGCC 180
LGEG V + L E AVK + + + E ++ + Q H+N++ L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 181 IDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRIIH 240
++D L++E M S+ L KR + + +++ +A L +LH I H
Sbjct: 81 EEEDRFYLVFEKMRGGSI---LSHIHKRRHFNELEASVVVQDVASALDFLHNKG---IAH 134
Query: 241 RDLKASNILLDK--DMNP-KISDFGMARICGGNELQANTSRI--------VGTYGYMSPE 289
RDLK NIL + ++P KI DF + G +L + S I G+ YM+PE
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLG---SGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 290 ----YALEG-IFSIKSDVFSFGVLLLEIVSG 315
++ E I+ + D++S GV+L ++SG
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLRE----MKNEASVIAKVQHKNLVRLLG 178
+G G FG V L+ D++ ++ + E R + E V+ K + L
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 179 CCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSRVRI 238
D + L+ +Y L L + L + + R + A+ ++ + ++
Sbjct: 142 AFQDDNNLYLVMDYYVGGDL-LTLLSKFEDRLPEEMARFYL----AEMVIAIDSVHQLHY 196
Query: 239 IHRDLKASNILLDKDMNPKISDFGMA-RICGGNELQANTSRIVGTYGYMSPE--YALE-- 293
+HRD+K NIL+D + + +++DFG ++ +Q++ + VGT Y+SPE A+E
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA--VGTPDYISPEILQAMEGG 254
Query: 294 -GIFSIKSDVFSFGVLLLEIVSGK 316
G + + D +S GV + E++ G+
Sbjct: 255 KGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 123 LGEGGFGPVYKGVLRKGDE-IAVKRLSGRSEQ--GLREMKNEASVIAKVQHKNLVRLLGC 179
+G G +G VY + ++ +A+K+++ E + + E +++ +++ ++RL
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 180 CIDKD----EKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQYSR 235
I D +++ I + + L P I L I+ + G ++H+
Sbjct: 94 IIPDDLLKFDELYIVLEIADSDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHESG- 149
Query: 236 VRIIHRDLKASNILLDKDMNPKISDFGMARICGG-------NELQAN------------- 275
IIHRDLK +N LL++D + K+ DFG+AR N+L+ N
Sbjct: 150 --IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQ 207
Query: 276 -TSRIVGTYGYMSPEYA-LEGIFSIKSDVFSFGVLLLEIVS 314
TS +V T Y +PE L+ ++ D++S G + E+++
Sbjct: 208 LTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 113/246 (45%), Gaps = 39/246 (15%)
Query: 122 KLGEGGFGPVYKGVLRKGDE---IAVKRLSGR--SEQGLREMKNEASVIAKVQHKNLVRL 176
K+G G +G VYK + G + A+K++ G S RE+ +++ +++H N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREI----ALLRELKHPNVISL 83
Query: 177 LGCCIDK-DEKI-LIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLY----- 229
+ D K+ L+++Y + F + VQ+ G+ + LLY
Sbjct: 84 QKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN---KKPVQLPRGMVKSLLYQILDG 140
Query: 230 LHQYSRVRIIHRDLKASNILL----DKDMNPKISDFGMARICGGN-ELQANTSRIVGTYG 284
+H ++HRDLK +NIL+ + KI+D G AR+ + A+ +V T+
Sbjct: 141 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFW 200
Query: 285 YMSPEYALEGIFSIKS-DVFSFGVLLLEIVSGK----------KNTGLYRTDSL----NL 329
Y +PE L K+ D+++ G + E+++ + K + Y D L N+
Sbjct: 201 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV 260
Query: 330 LGYVWD 335
+G+ D
Sbjct: 261 MGFPAD 266
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 28/209 (13%)
Query: 123 LGEGGFGPVYKGV-LRKGDEIAVKRLSGRSEQGLREMKN------EASVIAKVQ----HK 171
LG+GGFG V+ G L ++A+K + G + + E +++ KV H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 172 NLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLL 228
++RLL ++ +L+ E P + D F + K L + +R Q++ I
Sbjct: 99 GVIRLLDWFETQEGFMLVLE-RPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQ---- 153
Query: 229 YLHQYSRVRIIHRDLKASNILLD-KDMNPKISDFGMARICGGNELQANTSRIVGTYGYMS 287
H +SR ++HRD+K NIL+D + K+ DFG + + GT Y
Sbjct: 154 --HCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY----TDFDGTRVYSP 206
Query: 288 PEY-ALEGIFSIKSDVFSFGVLLLEIVSG 315
PE+ + ++ + V+S G+LL ++V G
Sbjct: 207 PEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 12 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
++RLL D +LI E P D F F + L + + R + + + + H
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHN 128
Query: 233 YSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 291
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 129 XG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWI 181
Query: 292 LEGIFSIKS-DVFSFGVLLLEIVSG 315
+ +S V+S G+LL ++V G
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 6/99 (6%)
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGT 282
I + +L + ++ +HRD+K N+LLD + + +++DFG + ++ +S VGT
Sbjct: 181 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC-LKMNDDGTVQSSVAVGT 239
Query: 283 YGYMSPE--YALE---GIFSIKSDVFSFGVLLLEIVSGK 316
Y+SPE A+E G + + D +S GV + E++ G+
Sbjct: 240 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 44 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 157
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 158 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 210
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 31 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 90 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 144
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 145 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 197
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 45 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 158
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 159 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 211
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 45 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 158
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 159 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 211
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 44 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 157
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 158 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 210
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 44 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 157
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 158 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 210
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 15 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
++RLL D +LI E P D F F + L + + R + + + + H
Sbjct: 74 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHN 131
Query: 233 YSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 291
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 132 CG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWI 184
Query: 292 LEGIFSIKS-DVFSFGVLLLEIVSG 315
+ +S V+S G+LL ++V G
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 31 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 90 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 144
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 145 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 197
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 45 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 158
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 159 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 211
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 44 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 157
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 158 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 210
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 45 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 158
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 159 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 211
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 12 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
++RLL D +LI E P D F F + L + + R + + + + H
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHN 128
Query: 233 YSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 291
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 129 CG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWI 181
Query: 292 LEGIFSIKS-DVFSFGVLLLEIVSG 315
+ +S V+S G+LL ++V G
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 59 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 118 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 172
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 173 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 225
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 59 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 118 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 172
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 173 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 225
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 17 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 130
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 131 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 183
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 12 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQGLLYLHQ 232
++RLL D +LI E P D F F + L + + R + + + + H
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHN 128
Query: 233 YSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSPEYA 291
++HRD+K NIL+D + K+ DFG + + GT Y PE+
Sbjct: 129 CG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWI 181
Query: 292 LEGIFSIKS-DVFSFGVLLLEIVSG 315
+ +S V+S G+LL ++V G
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 17 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 130
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 131 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 183
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 32 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 145
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 146 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 198
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 111 STATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVKR----LSGR--SEQGLREMKNEAS 163
S T F + K+G G FG V+K V R G A+KR L+G + LRE+ A
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 64
Query: 164 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE-- 221
+ QH ++VR + D ++ EY SL + + + ++ + ++ +
Sbjct: 65 L---GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYR--IMSYFKEAELKDLL 119
Query: 222 -GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNP 256
+ +GL Y+H S ++H D+K SNI + + P
Sbjct: 120 LQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIP 152
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 40/215 (18%)
Query: 123 LGEGGFGPVYKGVLRKGDEIAVKRLSGRSEQGLREMK--NEASVIAKV---QHKNLVRLL 177
LG G +G V+ V+++SG L MK +A+++ K +H R +
Sbjct: 62 LGTGAYGKVF----------LVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV 111
Query: 178 GCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIEGIAQG----------- 226
I + ++ Y F + ++LD++ ++ ++Q
Sbjct: 112 LEHIRQSPFLVTLHYA-------FQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIY 164
Query: 227 ----LLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGT 282
+L L ++ II+RD+K NILLD + + ++DFG+++ +E + GT
Sbjct: 165 VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGT 223
Query: 283 YGYMSPEYALEGI--FSIKSDVFSFGVLLLEIVSG 315
YM+P+ G D +S GVL+ E+++G
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 111 STATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVKR----LSGR--SEQGLREMKNEAS 163
S T F + K+G G FG V+K V R G A+KR L+G + LRE+ A
Sbjct: 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 66
Query: 164 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE-- 221
+ QH ++VR + D ++ EY SL + + + ++ + ++ +
Sbjct: 67 L---GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYR--IMSYFKEAELKDLL 121
Query: 222 -GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNP 256
+ +GL Y+H S ++H D+K SNI + + P
Sbjct: 122 LQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIP 154
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 16 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 75 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 129
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 130 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 182
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 111 STATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVKR----LSGR--SEQGLREMKNEAS 163
S T F + K+G G FG V+K V R G A+KR L+G + LRE+ A
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 64
Query: 164 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE-- 221
+ QH ++VR + D ++ EY SL + + + ++ + ++ +
Sbjct: 65 L---GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYR--IMSYFKEAELKDLL 119
Query: 222 -GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNP 256
+ +GL Y+H S ++H D+K SNI + + P
Sbjct: 120 LQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIP 152
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 6/99 (6%)
Query: 223 IAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNPKISDFGMARICGGNELQANTSRIVGT 282
I + +L + ++ +HRD+K N+LLD + + +++DFG + ++ +S VGT
Sbjct: 197 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC-LKMNDDGTVQSSVAVGT 255
Query: 283 YGYMSPE--YALE---GIFSIKSDVFSFGVLLLEIVSGK 316
Y+SPE A+E G + + D +S GV + E++ G+
Sbjct: 256 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 13/104 (12%)
Query: 218 QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNP------KISDFGMARICGGNE 271
QI + + GL Y+H+ R IIH D+K N+L++ +P KI+D G A C +E
Sbjct: 135 QISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDE 190
Query: 272 LQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
N+ + T Y SPE L + +D++S L+ E+++G
Sbjct: 191 HYTNS---IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 111 STATNTFSDTNKLGEGGFGPVYKGVLR-KGDEIAVKR----LSGR--SEQGLREMKNEAS 163
S T F + K+G G FG V+K V R G A+KR L+G + LRE+ A
Sbjct: 3 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 62
Query: 164 VIAKVQHKNLVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRVQIIE-- 221
+ QH ++VR + D ++ EY SL + + + ++ + ++ +
Sbjct: 63 L---GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYR--IMSYFKEAELKDLL 117
Query: 222 -GIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNP 256
+ +GL Y+H S ++H D+K SNI + + P
Sbjct: 118 LQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIP 150
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 13/104 (12%)
Query: 218 QIIEGIAQGLLYLHQYSRVRIIHRDLKASNILLDKDMNP------KISDFGMARICGGNE 271
QI + + GL Y+H+ R IIH D+K N+L++ +P KI+D G A C +E
Sbjct: 135 QISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDE 190
Query: 272 LQANTSRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIVSG 315
N+ + T Y SPE L + +D++S L+ E+++G
Sbjct: 191 HYTNS---IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 32 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 145
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 146 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 198
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 32 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 145
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 146 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 198
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 64 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 123 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 177
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 178 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 230
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 231 EWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 123 LGEGGFGPVYKGVLRKGDE--IAVKRLSGRSEQGLREMKN------EASVIAKVQH--KN 172
LG GGFG VY G+ R D +A+K + E+ N E ++ KV
Sbjct: 17 LGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 173 LVRLLGCCIDKDEKILIYEYMPNKSLDFFLFDPTKRILLDWVTRV---QIIEGIAQGLLY 229
++RLL D +LI E P D F F + L + + R Q++E + +
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR----H 130
Query: 230 LHQYSRVRIIHRDLKASNILLDKDMNP-KISDFGMARICGGNELQANTSRIVGTYGYMSP 288
H ++HRD+K NIL+D + K+ DFG + + GT Y P
Sbjct: 131 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPP 183
Query: 289 EYALEGIFSIKS-DVFSFGVLLLEIVSG 315
E+ + +S V+S G+LL ++V G
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCG 211
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,519,119
Number of Sequences: 62578
Number of extensions: 453325
Number of successful extensions: 3669
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 236
Number of HSP's that attempted gapping in prelim test: 1189
Number of HSP's gapped (non-prelim): 1175
length of query: 436
length of database: 14,973,337
effective HSP length: 102
effective length of query: 334
effective length of database: 8,590,381
effective search space: 2869187254
effective search space used: 2869187254
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)