Query 040534
Match_columns 822
No_of_seqs 581 out of 2466
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 09:23:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040534.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040534hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03185 phosphatidylinositol 100.0 2E-170 4E-175 1484.6 69.0 753 54-819 1-765 (765)
2 KOG0229 Phosphatidylinositol-4 100.0 5E-109 1E-113 894.2 30.5 387 396-819 25-420 (420)
3 cd00139 PIPKc Phosphatidylinos 100.0 6.9E-89 1.5E-93 736.7 32.6 303 412-819 1-313 (313)
4 smart00330 PIPKc Phosphatidyli 100.0 3E-80 6.5E-85 677.5 32.2 336 439-818 1-342 (342)
5 PF01504 PIP5K: Phosphatidylin 100.0 1.3E-65 2.8E-70 543.5 16.1 246 495-818 1-252 (252)
6 COG5253 MSS4 Phosphatidylinosi 100.0 1.6E-57 3.6E-62 493.7 15.6 306 398-818 281-596 (612)
7 KOG0230 Phosphatidylinositol-4 100.0 5.4E-49 1.2E-53 469.2 17.3 247 467-819 1324-1587(1598)
8 PLN03185 phosphatidylinositol 100.0 2.4E-36 5.2E-41 355.3 21.4 205 35-241 4-212 (765)
9 COG4642 Uncharacterized protei 99.7 1.8E-17 3.8E-22 155.1 12.1 130 84-236 8-137 (139)
10 COG4642 Uncharacterized protei 99.7 1.5E-17 3.2E-22 155.6 11.3 133 58-190 5-137 (139)
11 KOG0231 Junctional membrane co 99.7 4.9E-18 1.1E-22 193.8 9.0 184 59-244 119-317 (455)
12 KOG0231 Junctional membrane co 99.7 1.8E-17 3.9E-22 189.1 8.2 185 50-234 131-331 (455)
13 COG2849 Uncharacterized protei 98.5 1.7E-05 3.7E-10 83.7 20.9 138 73-232 85-227 (230)
14 COG2849 Uncharacterized protei 98.4 1.6E-05 3.4E-10 84.0 17.2 192 53-245 16-216 (230)
15 smart00698 MORN Possible plasm 97.2 0.00063 1.4E-08 47.0 4.2 22 201-222 2-23 (26)
16 smart00698 MORN Possible plasm 97.0 0.0012 2.7E-08 45.6 4.1 22 86-107 2-23 (26)
17 PF02493 MORN: MORN repeat; I 97.0 0.00069 1.5E-08 45.2 2.7 22 202-223 1-22 (23)
18 PF02493 MORN: MORN repeat; I 96.9 0.00078 1.7E-08 44.9 2.8 22 87-108 1-22 (23)
19 PLN02667 inositol polyphosphat 68.8 10 0.00022 41.7 6.2 66 519-595 23-99 (286)
20 PF07202 Tcp10_C: T-complex pr 59.4 65 0.0014 33.0 9.5 12 96-107 63-74 (179)
21 PF07202 Tcp10_C: T-complex pr 58.9 2.2E+02 0.0048 29.2 13.7 12 166-177 118-129 (179)
22 PF12226 Astro_capsid_p: Turke 48.8 7.3 0.00016 38.9 0.7 48 472-527 103-153 (230)
23 PF14977 FAM194: FAM194 protei 33.1 1.9E+02 0.0041 30.4 8.2 55 165-223 22-78 (208)
24 PF01636 APH: Phosphotransfera 32.1 1.7E+02 0.0038 29.3 7.9 73 507-582 5-78 (239)
25 PF07661 MORN_2: MORN repeat v 31.6 69 0.0015 20.3 3.1 11 98-108 3-13 (22)
26 PF14977 FAM194: FAM194 protei 26.9 3.1E+02 0.0066 28.9 8.5 12 143-154 67-78 (208)
27 PLN00034 mitogen-activated pro 26.1 3.9E+02 0.0084 29.4 9.9 103 509-649 84-189 (353)
28 cd06621 PKc_MAPKK_Pek1_like Ca 24.7 3.6E+02 0.0078 28.4 9.0 115 508-650 10-127 (287)
29 cd00180 PKc Catalytic domain o 23.7 2.2E+02 0.0048 27.2 6.7 108 509-649 3-113 (215)
30 PRK10345 hypothetical protein; 21.6 2.9E+02 0.0063 28.8 7.2 70 508-579 11-85 (210)
31 cd05040 PTKc_Ack_like Catalyti 20.7 5.4E+02 0.012 26.3 9.2 109 508-649 4-118 (257)
32 cd06608 STKc_myosinIII_like Ca 20.6 5.3E+02 0.012 26.4 9.2 115 508-649 15-134 (275)
No 1
>PLN03185 phosphatidylinositol phosphate kinase; Provisional
Probab=100.00 E-value=1.7e-170 Score=1484.56 Aligned_cols=753 Identities=82% Similarity=1.351 Sum_probs=668.5
Q ss_pred EEEEcCCCCEEEEEEeCCeeeeeEEEEEcCCcEEEEEEECcEEEEEEEEEecCCCEEEEEEeCCeEeceeEEECCCCcEE
Q 040534 54 GELALPNGESYSGSLLGNLPEGLGKYIWSDGCIYEGEWRRGMRHGNGKIRWPSGTVYEGEFSGGYIHGTGTYIGSDGLTY 133 (822)
Q Consensus 54 g~~~~~nG~~Y~G~~~~g~~~G~G~~~~~dG~~YeG~wknGk~~G~G~~~~~nG~~YeGef~~G~~~G~G~~~~~dG~~Y 133 (822)
|++.|+||++|+|+|.++++||.|++.|+||++|+|+|++|++||.|++.|++|.+|+|+|.+|++||.|++++++|.+|
T Consensus 1 Ge~~~~nGd~Y~Ge~~~g~~hG~G~~~~~DG~~YeGew~~Gk~hG~G~~~~~nG~~YeGeF~nG~~hG~G~~~~~~G~~Y 80 (765)
T PLN03185 1 GELVLSNGDFYSGSLLGNVPEGPGKYLWSDGCMYEGEWRRGMRHGNGKISWPSGATYEGEFSGGYMHGSGTYTGTDGTTY 80 (765)
T ss_pred CeEEecCCCEEEEEEECCccccceEEEECCCCEEEEEEECCEeeCcEeEEeCCCCEEEEEEECCEEeceEEEEecCCCEE
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeeeccceeEEeeCCceeeeccccCCCccCCeEEEEccCCEEEEEEeCCeeeeeEEEEEcCCCEEEEEEECCeEEE
Q 040534 134 KGRWRLNLKHGLGYQVYPNGDVFEGSWIQGAAEGPGKYTWANRDVYLGNMKGGKMSGKGTLTWTNGDSFEGSWLNGMMHG 213 (822)
Q Consensus 134 ~G~w~~g~~~G~G~~~~~nG~~YeG~wk~G~~~G~G~~~~~nG~~Y~G~fkngk~~G~G~~~~~nG~~YeG~w~nG~~~G 213 (822)
+|+|++|++||.|++.|+||++|+|+|++|+++|.|+|.|+||.+|+|+|++|++||.|+++|+||++|+|+|.||++||
T Consensus 81 eG~w~~gkkhG~G~~~y~nG~vYeG~wk~G~~~G~G~y~~~nG~~Y~Gefk~Gk~~G~G~l~~~nG~~YeG~w~nG~~hG 160 (765)
T PLN03185 81 KGRWRLNLKHGLGYQRYPNGDVFEGSWIQGLQEGPGKYTWANGNVYLGDMKGGKMSGKGTLTWVSGDSYEGQWLDGMMHG 160 (765)
T ss_pred EEEEeCCcccceeEEEEecchhhhhhhhcCceecceeeeccCCCeEEEEecCCEEecCEEEEEeCCCeEEEEEeCCccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEcCCCEEEEEEeCCeeeeeeEEEeCCceeccccccccccccccCCCCCccccccccccccchhhhccccCCCCCC
Q 040534 214 FGVYTWSDGGSYVGTWSRGLKDGKGTFYPNGIQLSVLQEPYLNALRIRGLLPDMRRQTHAHAHHASSVEMANAKVPGNRG 293 (822)
Q Consensus 214 ~G~~~~~dG~~y~G~w~~G~~~G~G~~y~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (822)
.|+++|+||.+|+|.|++|+++|.|+||++|.+.+...+.+.+.....+.+++.+.+......+ ...+.
T Consensus 161 ~G~y~~~DG~~Y~G~W~~G~~~G~G~~y~~G~~~p~~~~~~~~~l~~~g~~~~~~~~~~~~~~~-----------~~~~~ 229 (765)
T PLN03185 161 FGVYTWSDGGCYVGTWTRGLKDGKGVFYPAGSRVPAVQEFYLNALRKRGVLPDLRRQNQVLSSH-----------NSEQL 229 (765)
T ss_pred eEEEEECCCCEEEEEeeCCceEeEEEEEECCCcccccchhhhhcccccccccchhhcccccccc-----------ccccc
Confidence 9999999999999999999999999999999988888877888887778888776653321111 01344
Q ss_pred cccccccccccCccccccccccCCcccccccccccccceeeccCCccchhhhhhhcccccc-CCCCCcceeeeeccceeE
Q 040534 294 SRRISADKISKGNLINLEQSHRGNVSLERRWSLEVSFEKVIGHDSSLELSESISEGMEKAS-DKNVAPILEREYIQGVLI 372 (822)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 372 (822)
+|..|+++.+...+..+++.+++++|+.++|++++++++.++++++.. +..+. .+..+. .+.+.+|+||||||||||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (765)
T PLN03185 230 SRGVSSDKLSKGSLLPLEQSRNRNVSLERRWSLEVSIEKVIGHDYSGS-SSAVL-DEGSEVEYKANRPILEREYMQGVLI 307 (765)
T ss_pred ccccccccccccccccccccccccccccccccccCcccceeccccccc-ccccc-cchhhccccccccccchhhhcceee
Confidence 455555666665555577778889999999999999999999986522 22222 222221 123347999999999999
Q ss_pred eeeeccccccccchHHHhhhhhccccccCCceEeecCCccHHHHHHHHHHHHHhhcccCccccccCccCCccccceeEEe
Q 040534 373 SEFVLNNSFSQSSRREKRRQRKLVKEVKRPGETIIKGHRSYDLMLSLQLGIRYTVGKITPVQRRDVRASDFGPRASFWMN 452 (822)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~gh~~~~l~~~~~~GIr~sv~~~~~~~~~~l~~~dF~~~~~~~~~ 452 (822)
.|.+.+..++.+++++++++++..++.+++|++||+||+||+||+|||||||+||++++++|.++|+++||++++++++.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~gh~~~~l~~~~~~GIr~sv~~~~~~~~~~l~~~DF~~~~~~~~~ 387 (765)
T PLN03185 308 SELVLNNSFSSTSRRAKRRQKKLVKEIKRPGETIIKGHRSYDLMLSLQLGIRYTVGKITPIQRREVRPSDFGPRASFWMN 387 (765)
T ss_pred eeeecccccchhccccccccccchhhhcCCCcEEecCcCcHHHHHHHHHhHHHHhccccccCCccCChhhCcceEEEEEE
Confidence 98887654444444443444445578899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCcccCeEEEEcCHHHHHHHHHHcCCCHHHHHHhhcCCccccccCCCCCcceeEEEeeCCeEEEEcccHH
Q 040534 453 FPKEGSQLTPPHQSEDFKWKDYCPMVFRNLREMFKIDAADYMMSICGNDALRELSSPGKSGSIFFLSQDDRFMIKTLRKS 532 (822)
Q Consensus 453 f~~~gs~~tp~h~~~~f~~k~y~P~vF~~LR~~~~i~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~T~D~rfiiKti~~~ 532 (822)
||++|+++||+|++.+|+||||||+|||+||++|+||++||+.|||++.+|+|++|+|||||+||+|+|+|||||||+++
T Consensus 388 fp~~gs~~tp~h~~~~fkfkdY~P~vFr~LR~~fgId~~dyl~Sl~~~~~l~el~S~GKSGS~Fy~S~D~rFiIKTI~k~ 467 (765)
T PLN03185 388 FPKAGSQLTPSHQSEDFKWKDYCPMVFRNLREMFKIDAADYMMSICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRKS 467 (765)
T ss_pred cCcccCccCCCCccCceEEEEECHHHHHHHHHHhCCCHHHHHHhccCCccchhccCCCCcCCeEEEecCCcEEEEecCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHhcCCCccccceeeEEEEeeCCCeEEEEEEEeecccCCCceeeEEEecCCCCCCCCCCcccCccc
Q 040534 533 EVKVLLQMLPTYHDHVRSYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSTDNIEIDENT 612 (822)
Q Consensus 533 E~~~l~~~lp~Y~~h~~~n~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~ 612 (822)
|+++|++|||+||+||.+||+|||+||||||+|++.++++++||||+|||+++..||++||||||+++|.+++.+.++++
T Consensus 468 E~~~l~~iLp~Y~~hv~~n~~TLL~kf~Gl~~i~~~~g~k~~fvVM~NlF~~~~~I~~~yDLKGSt~~R~~~k~~~~~~~ 547 (765)
T PLN03185 468 EVKVLLRMLPDYHHHVKTYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSADKVEIDENT 547 (765)
T ss_pred HHHHHHHHHHHHHHHHhhCCCcchhhheEEEEEEeCCCcEEEEEEEecCCCCCCccceEEECCCCCCCCCCccccccCCC
Confidence 99999999999999999999999999999999999889999999999999999999999999999999999888888899
Q ss_pred ccccCCCCceeecChHHHHHHHHHhhhhHHHHhhCCccccceeeeeeecCcccccccc----ccccCCCccccc---chh
Q 040534 613 TLKDLDLNYCFYLEPSWREDLLKQIEIDSKFLEAQQIMDYSLLLGVHYRAPQHLRSLT----TIREDGLGIVAE---EED 685 (822)
Q Consensus 613 ~lKDld~~~~~~l~~~~~~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~----~~~~~~~~~~~~---~~~ 685 (822)
||||+||+.+|+|++++++.|++||++||+||++++|||||||||||++++++..... ++...+.....+ .++
T Consensus 548 tlKDlD~~~~~~l~~~~k~~l~~qL~~D~~FL~~~~IMDYSLLvGIh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (765)
T PLN03185 548 TLKDLDLNYSFYLEPSWRDALLRQIEIDSKFLEAQRIMDYSLLLGVHFRAPQHLRSLLPYSRSITADGLEVVAEEDTIED 627 (765)
T ss_pred eeeecCcCceEeeCHHHHHHHHHHHHHHHHHHhHCcCeecceEEEEEecChhhhcccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999998876544321 111112221111 133
Q ss_pred hhccc-cccccccCCCCCCCcccCCCCCCCccccCCCCCccccccCCCchhhhhhcccCCCcccccCCCCcc---ccccC
Q 040534 686 EISNY-QGLVLVPRGTDDSSVIAGPHIRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPARAEQIPGKQE---DLFHQ 761 (822)
Q Consensus 686 ~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~p~~~~~~~~~~~---~~~~~ 761 (822)
+.+.+ .+++++++.+.+.|+++++|++++++++++++..++|+++|++++.++|||+||||||+++.+.++ ...+|
T Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~mpara~~~~~~~~~~~~~~~e 707 (765)
T PLN03185 628 EELSYPEGLVLVPRGADDGSTVPGPHIRGSRLRASAAGDEEVDLLLPGTARLQIQLGVNMPARAERIPGREDKEKQSFHE 707 (765)
T ss_pred cccccccccccccccccccccCCCcccccccccccccCchhhhhccccccccchhhcccCchhhhcccccccccccccCc
Confidence 33333 778888888877788889999999999888889999999999998999999999999999887654 34678
Q ss_pred ccceEEEEEEEeeccccchhhHHHHHHhhhcCCCCCccccCchhHHHHHHHHHhccCC
Q 040534 762 SYDVVLYLGIIDILQEYNMSKKIEHAYKSLQFDSISISAVDPTFYSHRFLEFIEKVFP 819 (822)
Q Consensus 762 ~~~~vyy~GIIDiLq~Y~~~KklEh~~Ksl~~d~~~iS~v~P~~Ya~RF~~fi~~iF~ 819 (822)
.+++|||||||||||+|+++|||||+||+++||+.+||||+|+.|++||++||.+||+
T Consensus 708 ~~d~~~~~giidilq~y~~~k~~eh~~k~~~~~~~~is~v~p~~y~~rf~~f~~~~f~ 765 (765)
T PLN03185 708 VYDVVLYLGIIDILQEYNMSKKIEHAYKSLQFDSLSISAVDPTFYSKRFLEFIQKVFP 765 (765)
T ss_pred ccceEEEEEEEEeecccchhHHHHHHHhhhccCCCceeccChHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999999999999999999996
No 2
>KOG0229 consensus Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-109 Score=894.24 Aligned_cols=387 Identities=55% Similarity=0.894 Sum_probs=338.5
Q ss_pred cccccCCceEeecCCccHHHHHHHHHHHHHhhcccCccccccCccCCccccceeEEecCCCCCCCCCCCcccCeEEEEcC
Q 040534 396 VKEVKRPGETIIKGHRSYDLMLSLQLGIRYTVGKITPVQRRDVRASDFGPRASFWMNFPKEGSQLTPPHQSEDFKWKDYC 475 (822)
Q Consensus 396 ~~~~~~~g~~i~~gh~~~~l~~~~~~GIr~sv~~~~~~~~~~l~~~dF~~~~~~~~~f~~~gs~~tp~h~~~~f~~k~y~ 475 (822)
++..+.+|++|++||.||.||+|||||||||||+++++|.++|+..||.+.+++|+.||.+|+.+||+|.+.+|+|||||
T Consensus 25 ~~~~~~~g~~v~~~~~~~~l~~~lqlGI~~tVg~ls~v~~r~~~~~df~~~~k~~~~fp~~gs~~tp~h~~~~Fk~KdYc 104 (420)
T KOG0229|consen 25 KKHFVKQGEKVKKGHASYPLMLNLQLGIRHTVGSLSSVPERDLPVMDFPDVEKAYSKFPSEGSKFTPPHHSSDFKFKDYC 104 (420)
T ss_pred ccceeccCceEecccccHHHHHHHHhcchhhhcccccCCcccCchhhCchhhhhheecCCCCCccCCCCCccccchhhcC
Confidence 56778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHhhcCCccccccCCCCCcceeEEEeeCCeEEEEcccHHHHHHHHHHhHHHHHHHhcCCC-c
Q 040534 476 PMVFRNLREMFKIDAADYMMSICGNDALRELSSPGKSGSIFFLSQDDRFMIKTLRKSEVKVLLQMLPTYHDHVRSYEN-T 554 (822)
Q Consensus 476 P~vF~~LR~~~~i~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~T~D~rfiiKti~~~E~~~l~~~lp~Y~~h~~~n~~-t 554 (822)
|+|||+||++||||++|||.|||+++++++++|||||||+||+|+|+|||||||+++|+++|++|||.||+|+.++++ |
T Consensus 105 P~vFR~lRelFgId~~DYl~Slc~~~~l~e~sspGksGS~Fy~S~DdrFiIKTv~~~E~~~l~~mLp~Yy~~v~~~~~~T 184 (420)
T KOG0229|consen 105 PMVFRNLRELFGIDPADYLLSLCGNPPLRELSSPGKSGSFFYLSYDDRFIIKTVRKSEVKVLLKMLPGYYQHVVEQNNRT 184 (420)
T ss_pred hHHHHHHHHHhCCChHHHHHHHhcchhhhhccCCCCccceEEEecCceEEEEeccHHHHHHHHHHHHHHHHHHHccCCce
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999866555 9
Q ss_pred cccceeeEEEEeeCCCeEEEEEEEeecccCCCceeeEEEecCCCCCCCCCC-cccCcccccccCCCC---ceeecChHHH
Q 040534 555 LITKFFGLHRIKPSSGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSTDN-IEIDENTTLKDLDLN---YCFYLEPSWR 630 (822)
Q Consensus 555 LL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~-~~~~~~~~lKDld~~---~~~~l~~~~~ 630 (822)
|||||||||||++.+|+++|||||+|||++++.||++|||||||++|.+++ .++++.+||||+||. .+|+|+++++
T Consensus 185 Ll~kf~Gly~vk~~gg~k~yfvVM~Nlf~~~~~iH~kyDLKGSt~~R~askke~~k~~pTlKDlDf~~~~~~~~l~~~~~ 264 (420)
T KOG0229|consen 185 LLPKFFGLYRVKPDGGKKIYFVVMNNLFPSRLKVHRKYDLKGSTVGREASKKEKIKELPTLKDLDFLNEGQKLYLGKEAK 264 (420)
T ss_pred eehhhceeEEEeeCCCceEEEEEecccCCCccceeEEeecCCCcccccccchhhccCCCccccchhhccCceEecCHHHH
Confidence 999999999999988999999999999999999999999999999999987 557889999999997 8999999999
Q ss_pred HHHHHHhhhhHHHHhhCCccccceeeeeeecCccccccccccccCCCcccccchhhhccccccccccCCCCCCCcccCCC
Q 040534 631 EDLLKQIEIDSKFLEAQQIMDYSLLLGVHYRAPQHLRSLTTIREDGLGIVAEEEDEISNYQGLVLVPRGTDDSSVIAGPH 710 (822)
Q Consensus 631 ~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 710 (822)
++|++||++||+||++++|||||||||||++++...+.. +.+ +.+.++
T Consensus 265 ~~l~~ql~~Dce~Le~~~IMDYSLLvGiH~~~~~~~~~~-~~~-------------------------------~~~~~~ 312 (420)
T KOG0229|consen 265 KALLKQLKRDCEFLESLKIMDYSLLVGIHDRDRGQAEKE-ELE-------------------------------PQEDES 312 (420)
T ss_pred HHHHHHHHHHHHHHHHhcchhhhheeeeeeccccccchh-hcC-------------------------------CCCCcc
Confidence 999999999999999999999999999999876422110 000 011112
Q ss_pred CCCCccccCCCCCccccccCCCchhhhhhcccCCCccccc--CCCCcc--ccccCccceEEEEEEEeeccccchhhHHHH
Q 040534 711 IRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPARAEQ--IPGKQE--DLFHQSYDVVLYLGIIDILQEYNMSKKIEH 786 (822)
Q Consensus 711 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~p~~~~~--~~~~~~--~~~~~~~~~vyy~GIIDiLq~Y~~~KklEh 786 (822)
++.++.+..+. + + .++.++...+|+|.++|+++.. .....+ .....++++|||||||||||+|+++||+||
T Consensus 313 ~~~~~~~~~~~---~-~-~~~~~~~~~i~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~v~y~GIIDILq~Y~~~KK~EH 387 (420)
T KOG0229|consen 313 EREQRLSSASP---E-D-VLTSTASPSIQLGANMPARAGEERVDRMEYAPAQNSGGYDVVLYIGIIDILQDYDIKKKLEH 387 (420)
T ss_pred ccccccccccc---c-c-cCCCCCcccccCCCCCCCccccccccccccccccccCcceEEEEEEeehhhhhcchhhHHHH
Confidence 22222222111 1 2 3444555668999999999832 222221 112236799999999999999999999999
Q ss_pred HHhhhcCCCCCccccCchhHHHHHHHHHhccCC
Q 040534 787 AYKSLQFDSISISAVDPTFYSHRFLEFIEKVFP 819 (822)
Q Consensus 787 ~~Ksl~~d~~~iS~v~P~~Ya~RF~~fi~~iF~ 819 (822)
+||+++||+.+||||+|++||+||++||.++|.
T Consensus 388 ~~Ksl~~d~~tIS~v~P~~Ys~RF~dFi~~~~~ 420 (420)
T KOG0229|consen 388 AYKSLQHDPDTISAVDPKFYAKRFLDFISNIFF 420 (420)
T ss_pred HHhhhccCCceeeccCHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999884
No 3
>cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate. CD alignment includes type II phosphatidylinositol phosphate kinases (PIPKII-beta), type I andII PIPK (-alpha, -beta, and -gamma) kinases and related yeast Fab1p and Mss4p kinases. Signaling by phosphorylated species of phosphatidylinositol regulates secretion, vesicular trafficking, membrane translocation, cell adhesion, chemotaxis, DNA synthesis, and cell cycling. The catalytic core domains of PIPKs are structurally similar to PI3K, PI4K, and cAMP-dependent protein kinases (PKA), the dimerization region is a unique feature of the PIPKs.
Probab=100.00 E-value=6.9e-89 Score=736.70 Aligned_cols=303 Identities=51% Similarity=0.845 Sum_probs=284.7
Q ss_pred cHHHHHHHHHHHHHhhcccCcccc-ccCccCCccccceeEEecCCCCCCCCCCCcccCeEEEEcCHHHHHHHHHHcCCCH
Q 040534 412 SYDLMLSLQLGIRYTVGKITPVQR-RDVRASDFGPRASFWMNFPKEGSQLTPPHQSEDFKWKDYCPMVFRNLREMFKIDA 490 (822)
Q Consensus 412 ~~~l~~~~~~GIr~sv~~~~~~~~-~~l~~~dF~~~~~~~~~f~~~gs~~tp~h~~~~f~~k~y~P~vF~~LR~~~~i~~ 490 (822)
+|.||+|||||||+||+++++.|. ++|.++||.++ .++.||++|+..||+|...+|+|++|||.||++||++|||++
T Consensus 1 ~~~l~~~~~~Gi~~~v~~~~~~~~~~~l~~~Df~~~--~~~~~~~~~~~~~~~~~~~~f~fk~Y~P~vF~~lR~~~gi~~ 78 (313)
T cd00139 1 SYPLMSNLQLGIRHSVGELSSVPSPRDLLPDDFKAK--SKIKFPNHGSHLTPPHLSADFKFKDYCPEVFRALRELFGIDE 78 (313)
T ss_pred ChHHHHHHHHHHHHHhhhcccCCccccCchhhhhhe--EEEEcCCCCCcccCCCCCccEEEEEeCHHHHHHHHHHcCCCH
Confidence 689999999999999999999887 89999999655 456799999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCccccccCCCCCcceeEEEeeCCeEEEEcccHHHHHHHHHHhHHHHHHHhcCC-CccccceeeEEEEeeC-
Q 040534 491 ADYMMSICGNDALRELSSPGKSGSIFFLSQDDRFMIKTLRKSEVKVLLQMLPTYHDHVRSYE-NTLITKFFGLHRIKPS- 568 (822)
Q Consensus 491 ~~y~~Sl~~~~~l~~~~s~GKSGs~F~~T~D~rfiiKti~~~E~~~l~~~lp~Y~~h~~~n~-~tLL~k~~Gl~~i~~~- 568 (822)
++|+.|||++. +.++.|+|||||+||+|+|+|||||||+++|+++|+++||+||+||.+|| +|||+||||||+|++.
T Consensus 79 ~dy~~Sl~~~~-~~e~~s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~Lp~Y~~~~~~n~~~TLL~k~~Gl~~i~~~~ 157 (313)
T cd00139 79 ADYLRSLCRSP-LWELSSGGKSGSFFYKTLDDRFIIKTVSHSEIESLLKFLPNYYEYITQNPQNTLLPKFFGLYRVKVKS 157 (313)
T ss_pred HHHHHHhcCCC-CccCCCCCCCCCEEEEecCCcEEEEecCHHHHHHHHHHHHHHHHHHHhCCCCcchhhheEEEEEEEcC
Confidence 99999999754 78889999999999999999999999999999999999999999999999 9999999999999987
Q ss_pred -CCeEEEEEEEeecccCCCceeeEEEecCCCCCCCCCCc-ccCcccccccCCCCc----eeecChHHHHHHHHHhhhhHH
Q 040534 569 -SGQKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSTDNI-EIDENTTLKDLDLNY----CFYLEPSWREDLLKQIEIDSK 642 (822)
Q Consensus 569 -~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~-~~~~~~~lKDld~~~----~~~l~~~~~~~l~~ql~~D~~ 642 (822)
.++++|||||+|||+++..||++||||||+++|.+++. ..++.+||||+||.. +|+|++++++.|++||++||+
T Consensus 158 ~~~~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~vlKD~df~~~~~~~i~l~~~~k~~l~~qL~~D~~ 237 (313)
T cd00139 158 GTGKKVDFLVMENLFYSRLKIHRKYDLKGSTRNREASKKEKQKENPVLKDLNLLEMIEQPLFVGEHSKKALLTQIKRDCE 237 (313)
T ss_pred CCCceEEEEEEecCCCCCccceEEEECCCCCCCCCcCcccccCCccccchhhhHhhcCceEEeCHHHHHHHHHHHHHHHH
Confidence 47899999999999998999999999999999999874 456789999999954 899999999999999999999
Q ss_pred HHhhCCccccceeeeeeecCccccccccccccCCCcccccchhhhccccccccccCCCCCCCcccCCCCCCCccccCCCC
Q 040534 643 FLEAQQIMDYSLLLGVHYRAPQHLRSLTTIREDGLGIVAEEEDEISNYQGLVLVPRGTDDSSVIAGPHIRGSRLRASSAG 722 (822)
Q Consensus 643 FL~~~~imDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 722 (822)
||+++||||||||||||..
T Consensus 238 FL~~~~iMDYSLLvGi~~~------------------------------------------------------------- 256 (313)
T cd00139 238 FLESLNIMDYSLLVGIHDI------------------------------------------------------------- 256 (313)
T ss_pred HHHHCCCcccceEEEEecC-------------------------------------------------------------
Confidence 9999999999999999831
Q ss_pred CccccccCCCchhhhhhcccCCCcccccCCCCccccccCccceEEEEEEEeeccccchhhHHHHHHhhhcCCC-CCcccc
Q 040534 723 DEEVDLLLPGTARLQIQLGVNMPARAEQIPGKQEDLFHQSYDVVLYLGIIDILQEYNMSKKIEHAYKSLQFDS-ISISAV 801 (822)
Q Consensus 723 ~~~~d~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~vyy~GIIDiLq~Y~~~KklEh~~Ksl~~d~-~~iS~v 801 (822)
+.+||||||||||+||++||+||++|++.+++ .+||||
T Consensus 257 -----------------------------------------~~i~~~GIID~L~~y~~~Kk~E~~~K~~~~~~~~~iS~v 295 (313)
T cd00139 257 -----------------------------------------RLVLYLGIIDILRTYTWDKKLEHWVKSLGHDGGKTPSVV 295 (313)
T ss_pred -----------------------------------------CceEEEEEEeeeeeCCHHHHHHHHHHHhccCCCCCcceE
Confidence 12799999999999999999999999999987 899999
Q ss_pred CchhHHHHHHHHHhccCC
Q 040534 802 DPTFYSHRFLEFIEKVFP 819 (822)
Q Consensus 802 ~P~~Ya~RF~~fi~~iF~ 819 (822)
||++||+||++||+++|.
T Consensus 296 ~P~~Y~~RF~~fi~~~f~ 313 (313)
T cd00139 296 SPEQYAKRFREFMDKYFL 313 (313)
T ss_pred CHHHHHHHHHHHHHHhcC
Confidence 999999999999999984
No 4
>smart00330 PIPKc Phosphatidylinositol phosphate kinases.
Probab=100.00 E-value=3e-80 Score=677.53 Aligned_cols=336 Identities=46% Similarity=0.735 Sum_probs=272.3
Q ss_pred ccCCccccceeEEecCCCCCCCCCCCcccCeEEEEcCHHHHHHHHHHcCCCHHHHHHhhcCCccccccCCCCCcceeEEE
Q 040534 439 RASDFGPRASFWMNFPKEGSQLTPPHQSEDFKWKDYCPMVFRNLREMFKIDAADYMMSICGNDALRELSSPGKSGSIFFL 518 (822)
Q Consensus 439 ~~~dF~~~~~~~~~f~~~gs~~tp~h~~~~f~~k~y~P~vF~~LR~~~~i~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~ 518 (822)
+++||++.+++++.++.+ +..||+|++.+|+|++|||.+|+.||+++||++++|+.|||.+. ++|+.|+|||||+||+
T Consensus 1 ~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Y~P~~F~~lR~~~~i~~~~y~~Sl~~~~-~~~~~s~GKSGs~F~~ 78 (342)
T smart00330 1 LPSDFKATEKIKFPTPGH-LELTPSHGSADFKFKDYCPEVFRNLRELFGIDPADYLRSLCRSP-PLELSSGGKSGSFFYL 78 (342)
T ss_pred CccccccceeEeecCCCc-ccccCCCCCccEEEEEeCHHHHHHHHHHcCCCHHHHHHHhCCCC-ccccCCCCCCCCEEEE
Confidence 468999999999988877 79999999999999999999999999999999999999999654 3688999999999999
Q ss_pred eeCCeEEEEcccHHHHHHHHHHhHHHHHHHhcCCCccccceeeEEEEeeCCC--eEEEEEEEeecccCCCceeeEEEecC
Q 040534 519 SQDDRFMIKTLRKSEVKVLLQMLPTYHDHVRSYENTLITKFFGLHRIKPSSG--QKFRFVVMGNMFCTELRIHRRFDLKG 596 (822)
Q Consensus 519 T~D~rfiiKti~~~E~~~l~~~lp~Y~~h~~~n~~tLL~k~~Gl~~i~~~~~--~~~~fvVM~Nlf~~~~~i~~~yDLKG 596 (822)
|+|+|||||||+++|+++|+++||+||+||.+||+|||+||||||+|++.++ .++|||||+|||++...||++|||||
T Consensus 79 T~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~n~~SlL~ki~Gly~i~~~~~~~~~~~fiVM~NlF~~~~~i~~~yDLKG 158 (342)
T smart00330 79 SLDDRFIIKTVSKSEIKSLLPMLPNYYEHIVQNPNTLLPKFFGLYRVKVKGGTEKKIYFLVMENLFYSDLKVHRKYDLKG 158 (342)
T ss_pred ecCCcEEEEecCHHHHHHHHHHHHHHHHHHHhCCCcchhhhcEEEEEEECCCcceeEEEEEEecCCCCCCceeEEEECCC
Confidence 9999999999999999999999999999999999999999999999998776 69999999999998899999999999
Q ss_pred CCCCCCCCCcccCcccccccCCCC----ceeecChHHHHHHHHHhhhhHHHHhhCCccccceeeeeeecCcccccccccc
Q 040534 597 SSLGRSTDNIEIDENTTLKDLDLN----YCFYLEPSWREDLLKQIEIDSKFLEAQQIMDYSLLLGVHYRAPQHLRSLTTI 672 (822)
Q Consensus 597 S~~~R~~~~~~~~~~~~lKDld~~----~~~~l~~~~~~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~~~ 672 (822)
|+++|.+.+......+||||+||. .+|+|+++.++.|++||++||+||+++||||||||||||..+.......
T Consensus 159 S~~~R~~~~~~~~~~~vlkD~df~~~~~~~i~l~~~~k~~l~~ql~~D~~FL~~~~imDYSLLvGi~~~~~~~~~~~--- 235 (342)
T smart00330 159 STRGREADKKKVKELPVLKDLDLVEMWNQPIYVDPLAKKALLKQIKRDCEFLESLKIMDYSLLVGIHDIERGQREEI--- 235 (342)
T ss_pred CCCCCCcCccccCCCCcccccchhhccCCeEEECHHHHHHHHHHHHHHHHHHHHccchhhhhhhccccccccchhcc---
Confidence 999999987666778999999997 6799999999999999999999999999999999999998654322110
Q ss_pred ccCCCcccccchhhhccccccccccCCCCCCCcccCCCCCCCccccCCCCCccccccCCCchhhhhhcccCCCcccccCC
Q 040534 673 REDGLGIVAEEEDEISNYQGLVLVPRGTDDSSVIAGPHIRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPARAEQIP 752 (822)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~p~~~~~~~ 752 (822)
+.... ... ...+.....+.+.. . . .. .+.+..........+|. +|+++.+
T Consensus 236 ~~~~~-~~~---------------~~~~~~~~~~~~~~-----~-~---~~--~~~~~~~~~~~~~~~~~-~~~~~~~-- 285 (342)
T smart00330 236 ELPPV-YGS---------------DESPSSESSNGGKA-----P-D---IT--GNLLVSNSPDGDGPFGG-IPARAIR-- 285 (342)
T ss_pred ccccc-ccc---------------cccccccccccCCC-----c-c---cc--ccccccccccccccccc-ccccccc--
Confidence 00000 000 00000000000000 0 0 00 00000000001112333 5555432
Q ss_pred CCccccccCccceEEEEEEEeeccccchhhHHHHHHhhhcCCCCCccccCchhHHHHHHHHHhccC
Q 040534 753 GKQEDLFHQSYDVVLYLGIIDILQEYNMSKKIEHAYKSLQFDSISISAVDPTFYSHRFLEFIEKVF 818 (822)
Q Consensus 753 ~~~~~~~~~~~~~vyy~GIIDiLq~Y~~~KklEh~~Ksl~~d~~~iS~v~P~~Ya~RF~~fi~~iF 818 (822)
...+|||||||||||+||++||+||++|++++++.+||||||++||+||++||+++|
T Consensus 286 ---------~~~~vy~iGIID~Lq~Y~~~KklE~~~K~~~~~~~~iS~V~P~~Y~~RF~~fi~~~F 342 (342)
T smart00330 286 ---------ARRVVLYLGIIDILQTYTWDKKLEHWVKSIGHDGKTISVVHPEQYAKRFRDFMDKYF 342 (342)
T ss_pred ---------CCceEEEEEEEEEEEeCCHhHHHHHHHHHhccCCCCcceECHHHHHHHHHHHHHhhC
Confidence 124799999999999999999999999999999999999999999999999999998
No 5
>PF01504 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; InterPro: IPR002498 This entry represents a conserved region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in []. This region is found in I, II and III phosphatidylinositol-4-phosphate 5-kinases (PIP5K enzymes). PIP5K catalyses the formation of phosphoinositol-4,5-bisphosphate via the phosphorylation of phosphatidylinositol-4-phosphate a precursor in the phosphinositide signalling pathway.; GO: 0016307 phosphatidylinositol phosphate kinase activity, 0046488 phosphatidylinositol metabolic process; PDB: 1BO1_A 2GK9_C 2YBX_B.
Probab=100.00 E-value=1.3e-65 Score=543.50 Aligned_cols=246 Identities=46% Similarity=0.769 Sum_probs=159.4
Q ss_pred HhhcCCccccccCCCCCcceeEEEeeCCeEEEEcccHHHHHHHHHHhHHHHHHHhcCCCccccceeeEEEEeeCCC-eEE
Q 040534 495 MSICGNDALRELSSPGKSGSIFFLSQDDRFMIKTLRKSEVKVLLQMLPTYHDHVRSYENTLITKFFGLHRIKPSSG-QKF 573 (822)
Q Consensus 495 ~Sl~~~~~l~~~~s~GKSGs~F~~T~D~rfiiKti~~~E~~~l~~~lp~Y~~h~~~n~~tLL~k~~Gl~~i~~~~~-~~~ 573 (822)
+|||+.+++++..|+|||||+||+|.|+|||||||+++|+++|+++||+||+||.+||+|||+||||||+|+..++ +++
T Consensus 1 ~sl~~~~~~~~~~s~GKSGs~F~~T~D~kfiiKti~~~E~~~l~~~lp~Y~~~~~~~~~SlL~r~~Gl~~i~~~~~~~~~ 80 (252)
T PF01504_consen 1 MSLCNLSSLSEKSSGGKSGSFFFFTSDGKFIIKTISKSEFKFLLKILPAYFEHMSENPNSLLPRFYGLYSIKKSNGKEKI 80 (252)
T ss_dssp ----------ES---SSSSS-EEE-TTSSEEEEEE-HHHHHHHHHHHHHHHHHHHHTTTSSS--EEEEEEE-EETT-EEE
T ss_pred CCccccccccccCCCCCccCEEEEeCCCCEEEEeCCHHHHHHHHHHHHHHHHHHHhCcCchHHHHHHHheecccCCceeE
Confidence 4899888999999999999999999999999999999999999999999999999999999999999999966566 899
Q ss_pred EEEEEeecccCCCceeeEEEecCCCCCCCCCCcc-cCcccccccCCCC---ceeecChHHHHHHHHHhhhhHHHHhhCCc
Q 040534 574 RFVVMGNMFCTELRIHRRFDLKGSSLGRSTDNIE-IDENTTLKDLDLN---YCFYLEPSWREDLLKQIEIDSKFLEAQQI 649 (822)
Q Consensus 574 ~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~-~~~~~~lKDld~~---~~~~l~~~~~~~l~~ql~~D~~FL~~~~i 649 (822)
+||||+|+|++...||++||||||+++|.+.+++ .+..+||||+||. .+|+|+++++++|++||++||+||+++||
T Consensus 81 ~fvVM~N~f~~~~~i~~~yDLKGs~~~R~~~~~~~~~~~~~lkD~df~~~~~~i~l~~~~~~~l~~ql~~D~~FL~~~~i 160 (252)
T PF01504_consen 81 YFVVMENLFYTPRNIHERYDLKGSTVGRKAKKKDREQTEPVLKDLDFIESKRKIHLGPEQKEELLKQLERDTEFLSSHNI 160 (252)
T ss_dssp EEEEEE-SS-SSS--SEEEEE--SSSSS-S-CHHHCSSS-EEEHHHHHHTT--SBS-SCHHHHHHHHHHHHHHHHHHTTE
T ss_pred EEEEECCCccCCcccceEEecCCcccCCCCCccccccccceeecccccccCcEEEeChHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999989999999999999999998632 3457999999996 89999999999999999999999999999
Q ss_pred cccceeeeeeecCccccccccccccCCCcccccchhhhccccccccccCCCCCCCcccCCCCCCCccccCCCCCcccccc
Q 040534 650 MDYSLLLGVHYRAPQHLRSLTTIREDGLGIVAEEEDEISNYQGLVLVPRGTDDSSVIAGPHIRGSRLRASSAGDEEVDLL 729 (822)
Q Consensus 650 mDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~ 729 (822)
||||||||||......... ... . ... .
T Consensus 161 mDYSLLvGi~~~~~~~~~~----------------~~~-~-------~~~-----------------------------~ 187 (252)
T PF01504_consen 161 MDYSLLVGIHNRDSNEEQE----------------NKS-S-------FPS-----------------------------Y 187 (252)
T ss_dssp ES-EEEEEEEH---HHHHH----------------H-H-----------T-----------------------------T
T ss_pred cccceeEeeeecccccccc----------------ccc-c-------ccc-----------------------------c
Confidence 9999999999432211000 000 0 000 0
Q ss_pred CCCchhhhhhcccCCCcccccCCCCccccccCccceEEEEEEEeeccccchhhHHHHHHhhh-cCCCCCccccCchhHHH
Q 040534 730 LPGTARLQIQLGVNMPARAEQIPGKQEDLFHQSYDVVLYLGIIDILQEYNMSKKIEHAYKSL-QFDSISISAVDPTFYSH 808 (822)
Q Consensus 730 ~~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~vyy~GIIDiLq~Y~~~KklEh~~Ksl-~~d~~~iS~v~P~~Ya~ 808 (822)
...+++. ..+.+||+|||||||+||++||+||++|++ .+++.+||||||+.||+
T Consensus 188 -----------~~~~~s~--------------~~~~vy~~GIID~L~~y~~~K~~E~~~K~~~~~~~~~iS~v~P~~Y~~ 242 (252)
T PF01504_consen 188 -----------AGGIMSE--------------DGNEVYYLGIIDILQEYNWKKKLEHFFKSLIKCDGQDISCVPPEEYAE 242 (252)
T ss_dssp -----------TTTTCCC--------------ETTEEEEEEEE-S-EETT------------------SSS---HHHHHH
T ss_pred -----------ccceeec--------------CCCeEEEEEEehheeeccHHHHHHHHHHHHhhcCCCCCcccCHHHHHH
Confidence 0001100 125699999999999999999999999998 67789999999999999
Q ss_pred HHHHHHhccC
Q 040534 809 RFLEFIEKVF 818 (822)
Q Consensus 809 RF~~fi~~iF 818 (822)
||++||+++|
T Consensus 243 RF~~~i~~~f 252 (252)
T PF01504_consen 243 RFIKFIESIF 252 (252)
T ss_dssp HHHHHHHHH-
T ss_pred HHHHHHHHhC
Confidence 9999999987
No 6
>COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-57 Score=493.68 Aligned_cols=306 Identities=33% Similarity=0.431 Sum_probs=242.1
Q ss_pred cccCCceEeecCCccHHHHHHHHHHHHHhhcccCccccccCccCCccccceeEEecCCCCCCCCCCCcccCeEEEEcCHH
Q 040534 398 EVKRPGETIIKGHRSYDLMLSLQLGIRYTVGKITPVQRRDVRASDFGPRASFWMNFPKEGSQLTPPHQSEDFKWKDYCPM 477 (822)
Q Consensus 398 ~~~~~g~~i~~gh~~~~l~~~~~~GIr~sv~~~~~~~~~~l~~~dF~~~~~~~~~f~~~gs~~tp~h~~~~f~~k~y~P~ 477 (822)
+....|-.|..||+||...+||..|||.++.++... +++..|..-. ..+|. ...+|+||+|||.
T Consensus 281 e~~l~~~~le~gh~n~~~synmltgirvtlsr~e~i---M~~~tdth~~------------e~~~e-g~~~~s~K~y~~e 344 (612)
T COG5253 281 ERLLNGMPLEGGHRNPQESYNMLTGIRVTLSRIEEI---MIKKTDTHLN------------EQFEE-GLYEFSCKDYFPE 344 (612)
T ss_pred hhhccccccccccccchhhhhhhhhhHHHHHHHHHH---hcCCcCccch------------hhccc-cceeeeHHhhCHH
Confidence 344456668999999999999999999999998654 3333343222 22333 2467999999999
Q ss_pred HHHHHHHHcCCCHHHHHHhhcCCccccccCCCCCcceeEEEeeCCeEEEEcccHHHHHHHHHHhHHHHHHHhcCCCcccc
Q 040534 478 VFRNLREMFKIDAADYMMSICGNDALRELSSPGKSGSIFFLSQDDRFMIKTLRKSEVKVLLQMLPTYHDHVRSYENTLIT 557 (822)
Q Consensus 478 vF~~LR~~~~i~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~T~D~rfiiKti~~~E~~~l~~~lp~Y~~h~~~n~~tLL~ 557 (822)
+||.||++||++++ + .++.....|.| +.+||||||||+|.|.|||||||+++|+..|+.++-.||.|+..||+||||
T Consensus 345 ~Fr~lR~l~g~~~a-l-vsl~sryil~E-~~~GKSGSff~~trD~kfIiKti~hsE~~~~r~~~~eY~~~V~~np~T~l~ 421 (612)
T COG5253 345 VFRELRALCGCDEA-L-VSLLSRYILWE-SNGGKSGSFFLFTRDYKFIIKTISHSEHICFRPMIFEYYVHVLFNPLTLLC 421 (612)
T ss_pred HHHHHHHHhCCcHH-H-HHHHhhhheec-cCCCcccceEEEeccchhhhhhhhhhhHHHHHHHHHHHHHHHHcCchHHHH
Confidence 99999999999998 4 44443445555 459999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEEEeeCCC------eEEEEEEEeecccCCCceeeEEEecCCCCCCCCCCccc--CcccccccCCC--CceeecCh
Q 040534 558 KFFGLHRIKPSSG------QKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSTDNIEI--DENTTLKDLDL--NYCFYLEP 627 (822)
Q Consensus 558 k~~Gl~~i~~~~~------~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~--~~~~~lKDld~--~~~~~l~~ 627 (822)
||||+|+|++..+ .|+|||||+|||+++. ||++||||||+.+|..+.... ..-.+.||++| +.++..-.
T Consensus 422 ki~G~yrv~~~~s~~~~k~~K~~fiVMeNlf~~~~-i~~ifDLKGS~~Nr~ve~~gk~~s~l~~mndv~wI~es~~~~~g 500 (612)
T COG5253 422 KIFGFYRVKSRSSISSSKSRKIYFIVMENLFYPHG-IHRIFDLKGSMRNRHVERTGKSMSVLLDMNDVEWIRESPKIVFG 500 (612)
T ss_pred HHhceeEEeccccccccccceeEEEEecccCCCCC-cceEEeccCchhhhhhhhhccccchhccchhHHHHHhCchhhhh
Confidence 9999999998775 8999999999999885 999999999999998765432 22356677788 33444444
Q ss_pred HHHHHHHHHhhhhHHHHhhCCccccceeeeeeecCccccccccccccCCCcccccchhhhccccccccccCCCCCCCccc
Q 040534 628 SWREDLLKQIEIDSKFLEAQQIMDYSLLLGVHYRAPQHLRSLTTIREDGLGIVAEEEDEISNYQGLVLVPRGTDDSSVIA 707 (822)
Q Consensus 628 ~~~~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 707 (822)
..|+.|+.||++|++||+++||||||||||||+.... ... ++
T Consensus 501 ~~Kk~~~sqv~~Dv~fLsklniMDYSllVgi~~~~~~-~~V-----------------------~~-------------- 542 (612)
T COG5253 501 LKKKLLLSQVWNDVLFLSKLNIMDYSLLVGIDDEREE-ASV-----------------------GL-------------- 542 (612)
T ss_pred HHHHHHHHHHHHHHHHHHHhCccceeEEEEeccchhh-cch-----------------------HH--------------
Confidence 8899999999999999999999999999999863110 000 00
Q ss_pred CCCCCCCccccCCCCCccccccCCCchhhhhhcccCCCcccccCCCCccccccCccceEEEEEEEeeccccchhhHHHHH
Q 040534 708 GPHIRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPARAEQIPGKQEDLFHQSYDVVLYLGIIDILQEYNMSKKIEHA 787 (822)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~vyy~GIIDiLq~Y~~~KklEh~ 787 (822)
|. |. + ......+.+||+||||+|+.|...|
T Consensus 543 ---I~--------------d~---------i-------------------~t~~t~Dk~~~~gI~d~lt~~s~~k----- 572 (612)
T COG5253 543 ---II--------------DF---------I-------------------RTRMTGDKKLESGIKDKLTVGSFTK----- 572 (612)
T ss_pred ---HH--------------hh---------h-------------------ccccccceeeeeehhhhhccceeee-----
Confidence 00 00 0 0001235689999999999999998
Q ss_pred HhhhcCCCCCccccCchhHHHHHHHHHhccC
Q 040534 788 YKSLQFDSISISAVDPTFYSHRFLEFIEKVF 818 (822)
Q Consensus 788 ~Ksl~~d~~~iS~v~P~~Ya~RF~~fi~~iF 818 (822)
...+++|+|.+|++||++||+.+.
T Consensus 573 -------~~~~t~v~p~~y~nrf~~~~e~yi 596 (612)
T COG5253 573 -------RKEPTAVTPRQYKNRFRKAMEAYI 596 (612)
T ss_pred -------cccceecCHHHHHHHHHHhHHHhh
Confidence 357999999999999999998643
No 7
>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-49 Score=469.23 Aligned_cols=247 Identities=31% Similarity=0.474 Sum_probs=221.1
Q ss_pred cCeEEEEcCHHHHHHHHHHcCCCHHHHHHhhcCCccccccCCCCCcceeEEEeeCCeEEEEcccHHHHHHHHHHhHHHHH
Q 040534 467 EDFKWKDYCPMVFRNLREMFKIDAADYMMSICGNDALRELSSPGKSGSIFFLSQDDRFMIKTLRKSEVKVLLQMLPTYHD 546 (822)
Q Consensus 467 ~~f~~k~y~P~vF~~LR~~~~i~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~T~D~rfiiKti~~~E~~~l~~~lp~Y~~ 546 (822)
..+.+|.|.+..|+.||+.++-++++|+.||+++.. |-+++|||||+|+.|.|+|||||.|++.|++.|++++|+||+
T Consensus 1324 ~k~svk~~yAe~F~~LR~~c~~sEe~fIrSLsRc~~--W~aqGGKSgs~F~KTlDDRFIiKq~sk~EleSFikFAP~YFk 1401 (1598)
T KOG0230|consen 1324 AKYSVKCYYAEQFRALRKICCPSEEDFIRSLSRCVK--WEAQGGKSGSFFAKTLDDRFIIKQMSKTELESFIKFAPAYFK 1401 (1598)
T ss_pred eEEEEEEEehhhHHHHHHhhCchHHHHHHHHhcCcc--cccCCCcccceeeccccchhhhhhccHHHHHHHHhhhHHHHH
Confidence 457899999999999999999999999999996554 559999999999999999999999999999999999999999
Q ss_pred HHh----cCCCccccceeeEEEEeeCC---C--eEEEEEEEeecccCCCceeeEEEecCCCCCCCCCCcccCcccccccC
Q 040534 547 HVR----SYENTLITKFFGLHRIKPSS---G--QKFRFVVMGNMFCTELRIHRRFDLKGSSLGRSTDNIEIDENTTLKDL 617 (822)
Q Consensus 547 h~~----~n~~tLL~k~~Gl~~i~~~~---~--~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~lKDl 617 (822)
||. +-..|.|+||||+|+|.++. | -|+.++||+|||+.+ .+.|.||||||.++|.+.... +.+.||-|.
T Consensus 1402 Yl~~s~~~~~PT~LAKIlGiyqV~vK~~~sgke~K~DvmVMENLfY~r-~vsRifDLKGS~RnR~v~~t~-~~d~VLLDe 1479 (1598)
T KOG0230|consen 1402 YLTESISQKSPTCLAKILGIYQVSVKSPKSGKETKMDVMVMENLFYGR-KVSRIFDLKGSLRNRYVPTTS-GADEVLLDE 1479 (1598)
T ss_pred HHHHHHhcCCcchhhhhheeEEEEEecCCCCceeEeeeeeehhhhhcc-ccceeeeccchhhhccCCCCC-CCceEEecH
Confidence 985 33449999999999997643 5 578899999999976 899999999999999998766 778999999
Q ss_pred CC-----CceeecChHHHHHHHHHhhhhHHHHhhCCccccceeeeeeecCccccccccccccCCCcccccchhhhccccc
Q 040534 618 DL-----NYCFYLEPSWREDLLKQIEIDSKFLEAQQIMDYSLLLGVHYRAPQHLRSLTTIREDGLGIVAEEEDEISNYQG 692 (822)
Q Consensus 618 d~-----~~~~~l~~~~~~~l~~ql~~D~~FL~~~~imDYSLLvGih~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (822)
|| ..+|++....|..|-++|.+||.||++++||||||||||.+.
T Consensus 1480 NlVe~~~~sPIfV~~~sK~lL~~aiwNDT~FLas~~VMDYSLLVGvD~e------------------------------- 1528 (1598)
T KOG0230|consen 1480 NLVEMMWTSPIYVGSHSKRLLRRAIWNDTSFLASINVMDYSLLVGVDDE------------------------------- 1528 (1598)
T ss_pred HHHhhhhcCCeeehHhHHHHHHHHHhcchHHhhhcccceeeeEEEeeCC-------------------------------
Confidence 98 468999999999999999999999999999999999999420
Q ss_pred cccccCCCCCCCcccCCCCCCCccccCCCCCccccccCCCchhhhhhcccCCCcccccCCCCccccccCccceEEEEEEE
Q 040534 693 LVLVPRGTDDSSVIAGPHIRGSRLRASSAGDEEVDLLLPGTARLQIQLGVNMPARAEQIPGKQEDLFHQSYDVVLYLGII 772 (822)
Q Consensus 693 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~vyy~GII 772 (822)
...|++|||
T Consensus 1529 -----------------------------------------------------------------------~~ELvlGII 1537 (1598)
T KOG0230|consen 1529 -----------------------------------------------------------------------NNELVLGII 1537 (1598)
T ss_pred -----------------------------------------------------------------------CCeEEEEeh
Confidence 013899999
Q ss_pred eeccccchhhHHHHHHhhhc--C-CCCCccccCchhHHHHHHHHHhccCC
Q 040534 773 DILQEYNMSKKIEHAYKSLQ--F-DSISISAVDPTFYSHRFLEFIEKVFP 819 (822)
Q Consensus 773 DiLq~Y~~~KklEh~~Ksl~--~-d~~~iS~v~P~~Ya~RF~~fi~~iF~ 819 (822)
|++++|||.||||.|.|.-. . .+...++|.|++|.+||+++|.++|.
T Consensus 1538 DfiRtYTWDKkLESWVK~sGl~gpk~~~PTVVSP~qYK~RFRkAMd~YfL 1587 (1598)
T KOG0230|consen 1538 DFIRTYTWDKKLESWVKSSGLGGPKNKQPTVVSPEQYKTRFRKAMDTYFL 1587 (1598)
T ss_pred HhhhhhhhhhhhhhheeccccccCCCCCCceeCHHHHHHHHHHHHhheee
Confidence 99999999999999999753 2 23689999999999999999999994
No 8
>PLN03185 phosphatidylinositol phosphate kinase; Provisional
Probab=100.00 E-value=2.4e-36 Score=355.28 Aligned_cols=205 Identities=30% Similarity=0.575 Sum_probs=188.0
Q ss_pred eccCCceeeccccCC-ceeEEEEEcCCCCEEEEEEeCCeeeeeEEEEEcCCcEEEEEEECcEEEEEEEEEecCCCEEEEE
Q 040534 35 ALNNGEAVHTSSETS-GFRVGELALPNGESYSGSLLGNLPEGLGKYIWSDGCIYEGEWRRGMRHGNGKIRWPSGTVYEGE 113 (822)
Q Consensus 35 ~l~ng~~~~~~~~~~-~~~~g~~~~~nG~~Y~G~~~~g~~~G~G~~~~~dG~~YeG~wknGk~~G~G~~~~~nG~~YeGe 113 (822)
.+.||..+....... .-+.|.+.++||.+|+|+|++|++||.|++.|++|.+|+|+|++|++||.|++++++|.+|+|+
T Consensus 4 ~~~nGd~Y~Ge~~~g~~hG~G~~~~~DG~~YeGew~~Gk~hG~G~~~~~nG~~YeGeF~nG~~hG~G~~~~~~G~~YeG~ 83 (765)
T PLN03185 4 VLSNGDFYSGSLLGNVPEGPGKYLWSDGCMYEGEWRRGMRHGNGKISWPSGATYEGEFSGGYMHGSGTYTGTDGTTYKGR 83 (765)
T ss_pred EecCCCEEEEEEECCccccceEEEECCCCEEEEEEECCEeeCcEeEEeCCCCEEEEEEECCEEeceEEEEecCCCEEEEE
Confidence 567888777654433 3478999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCeEeceeEEECCCCcEEEEEEeeeeccceeEEeeCCceeeeccccCCCccCCeEEEEccCCEEEEEEeCCeeeeeEE
Q 040534 114 FSGGYIHGTGTYIGSDGLTYKGRWRLNLKHGLGYQVYPNGDVFEGSWIQGAAEGPGKYTWANRDVYLGNMKGGKMSGKGT 193 (822)
Q Consensus 114 f~~G~~~G~G~~~~~dG~~Y~G~w~~g~~~G~G~~~~~nG~~YeG~wk~G~~~G~G~~~~~nG~~Y~G~fkngk~~G~G~ 193 (822)
|++|++||.|+++++||.+|+|+|++|+++|.|++.++||.+|+|+|++|+++|.|+++|+||..|+|+|.+|++||.|+
T Consensus 84 w~~gkkhG~G~~~y~nG~vYeG~wk~G~~~G~G~y~~~nG~~Y~Gefk~Gk~~G~G~l~~~nG~~YeG~w~nG~~hG~G~ 163 (765)
T PLN03185 84 WRLNLKHGLGYQRYPNGDVFEGSWIQGLQEGPGKYTWANGNVYLGDMKGGKMSGKGTLTWVSGDSYEGQWLDGMMHGFGV 163 (765)
T ss_pred EeCCcccceeEEEEecchhhhhhhhcCceecceeeeccCCCeEEEEecCCEEecCEEEEEeCCCeEEEEEeCCcceeeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCEEEEEEECCeEEEEEEEEEcCCC---EEEEEEeCCeeeeeeEEE
Q 040534 194 LTWTNGDSFEGSWLNGMMHGFGVYTWSDGG---SYVGTWSRGLKDGKGTFY 241 (822)
Q Consensus 194 ~~~~nG~~YeG~w~nG~~~G~G~~~~~dG~---~y~G~w~~G~~~G~G~~y 241 (822)
++|+||.+|+|.|.+|++||.|+++ ++|. .+.|.|. +...+.|+..
T Consensus 164 y~~~DG~~Y~G~W~~G~~~G~G~~y-~~G~~~p~~~~~~~-~~l~~~g~~~ 212 (765)
T PLN03185 164 YTWSDGGCYVGTWTRGLKDGKGVFY-PAGSRVPAVQEFYL-NALRKRGVLP 212 (765)
T ss_pred EEECCCCEEEEEeeCCceEeEEEEE-ECCCcccccchhhh-hccccccccc
Confidence 9999999999999999999999994 6776 3556666 4455566654
No 9
>COG4642 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.73 E-value=1.8e-17 Score=155.10 Aligned_cols=130 Identities=30% Similarity=0.514 Sum_probs=69.6
Q ss_pred CcEEEEEEECcEEEEEEEEEecCCCEEEEEEeCCeEeceeEEECCCCcEEEEEEeeeeccceeEEeeCCceeeeccccCC
Q 040534 84 GCIYEGEWRRGMRHGNGKIRWPSGTVYEGEFSGGYIHGTGTYIGSDGLTYKGRWRLNLKHGLGYQVYPNGDVFEGSWIQG 163 (822)
Q Consensus 84 G~~YeG~wknGk~~G~G~~~~~nG~~YeGef~~G~~~G~G~~~~~dG~~Y~G~w~~g~~~G~G~~~~~nG~~YeG~wk~G 163 (822)
+..|++.|..++..|.+++..++++++-|.+++++..|.|++.+.+|. .|+|.++|+
T Consensus 8 g~~y~~~~~~g~~~g~s~~~~~~car~~g~~kqg~~~Gkgs~~~~~G~-----------------------~Y~Gtl~ng 64 (139)
T COG4642 8 GLRYEGFFVRGKLEGLSTYDILGCARVGGSLKQGKLAGKGSLKYDNGR-----------------------IYTGTLKNG 64 (139)
T ss_pred heeeeeEEecccccccceEEeccccEEeeeEeeeecCCCccEEEcCCc-----------------------cccceEEcC
Confidence 344555555555555555555555555555555555555555555554 455555555
Q ss_pred CccCCeEEEEccCCEEEEEEeCCeeeeeEEEEEcCCCEEEEEEECCeEEEEEEEEEcCCCEEEEEEeCCeeee
Q 040534 164 AAEGPGKYTWANRDVYLGNMKGGKMSGKGTLTWTNGDSFEGSWLNGMMHGFGVYTWSDGGSYVGTWSRGLKDG 236 (822)
Q Consensus 164 ~~~G~G~~~~~nG~~Y~G~fkngk~~G~G~~~~~nG~~YeG~w~nG~~~G~G~~~~~dG~~y~G~w~~G~~~G 236 (822)
+++|.|++.++|+++|+|.|++++.+|+|+....+|.+|.|.|.+|+..|.|.+..+||.+|.|.++.++.++
T Consensus 65 k~nGqG~~~~~ngd~Y~g~F~s~~F~g~G~~~~~~Gw~~~G~F~~Gq~~g~g~l~~~~g~vy~G~fk~g~f~~ 137 (139)
T COG4642 65 KMNGQGTYTFANGDIYEGPFNSGKFRGQGTRGSFNGWLYIGRFTEGQANGKGFLLKEDGSVYTGMFKQGRFPK 137 (139)
T ss_pred cccCcEEEEecCCCeEeccccCccccceEeeccccCCEEeeeecccccCCceeEEecCCcEEeeeEEeeecCC
Confidence 5555555555555555555555555555555555555555555555555555555555555555555555444
No 10
>COG4642 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.73 E-value=1.5e-17 Score=155.64 Aligned_cols=133 Identities=28% Similarity=0.495 Sum_probs=108.7
Q ss_pred cCCCCEEEEEEeCCeeeeeEEEEEcCCcEEEEEEECcEEEEEEEEEecCCCEEEEEEeCCeEeceeEEECCCCcEEEEEE
Q 040534 58 LPNGESYSGSLLGNLPEGLGKYIWSDGCIYEGEWRRGMRHGNGKIRWPSGTVYEGEFSGGYIHGTGTYIGSDGLTYKGRW 137 (822)
Q Consensus 58 ~~nG~~Y~G~~~~g~~~G~G~~~~~dG~~YeG~wknGk~~G~G~~~~~nG~~YeGef~~G~~~G~G~~~~~dG~~Y~G~w 137 (822)
+.-+..|++.|..+++.|.+++...++..+.|..++|++.|.|.+.+.+|.+|+|.++|++++|.|++.+++|+.|+|.|
T Consensus 5 ~a~g~~y~~~~~~g~~~g~s~~~~~~car~~g~~kqg~~~Gkgs~~~~~G~~Y~Gtl~ngk~nGqG~~~~~ngd~Y~g~F 84 (139)
T COG4642 5 LAFGLRYEGFFVRGKLEGLSTYDILGCARVGGSLKQGKLAGKGSLKYDNGRIYTGTLKNGKMNGQGTYTFANGDIYEGPF 84 (139)
T ss_pred hhhheeeeeEEecccccccceEEeccccEEeeeEeeeecCCCccEEEcCCccccceEEcCcccCcEEEEecCCCeEeccc
Confidence 34567899999999999999999999999999999999999999999999999999999999999999988887777777
Q ss_pred eeeeccceeEEeeCCceeeeccccCCCccCCeEEEEccCCEEEEEEeCCeeee
Q 040534 138 RLNLKHGLGYQVYPNGDVFEGSWIQGAAEGPGKYTWANRDVYLGNMKGGKMSG 190 (822)
Q Consensus 138 ~~g~~~G~G~~~~~nG~~YeG~wk~G~~~G~G~~~~~nG~~Y~G~fkngk~~G 190 (822)
++++.+|.|+....+|..|+|.|.+|+.+|.|.+...++.+|.|.|+.++.++
T Consensus 85 ~s~~F~g~G~~~~~~Gw~~~G~F~~Gq~~g~g~l~~~~g~vy~G~fk~g~f~~ 137 (139)
T COG4642 85 NSGKFRGQGTRGSFNGWLYIGRFTEGQANGKGFLLKEDGSVYTGMFKQGRFPK 137 (139)
T ss_pred cCccccceEeeccccCCEEeeeecccccCCceeEEecCCcEEeeeEEeeecCC
Confidence 77777777776666666666666666666666666666666666666555554
No 11
>KOG0231 consensus Junctional membrane complex protein Junctophilin and related MORN repeat proteins [General function prediction only]
Probab=99.73 E-value=4.9e-18 Score=193.80 Aligned_cols=184 Identities=30% Similarity=0.538 Sum_probs=170.5
Q ss_pred CCCCEEEEEEeCCeeeeeEEEEEcCCcEEEEEEECcEEEEEEEEEecCCCEEEEEEeCCeEeceeEEECCCCcEEEEEEe
Q 040534 59 PNGESYSGSLLGNLPEGLGKYIWSDGCIYEGEWRRGMRHGNGKIRWPSGTVYEGEFSGGYIHGTGTYIGSDGLTYKGRWR 138 (822)
Q Consensus 59 ~nG~~Y~G~~~~g~~~G~G~~~~~dG~~YeG~wknGk~~G~G~~~~~nG~~YeGef~~G~~~G~G~~~~~dG~~Y~G~w~ 138 (822)
++...|.|.. +...|.|...+++|++|+|+|++++++|.|..++++|..|+|+|.++++||+|++++++|.+|+|+|+
T Consensus 119 ~~~~~~~~~~--~~~~g~g~~~~~~g~~Y~G~~~~~k~sG~Gv~~~~~G~~Y~Gew~~n~~hG~G~~~~pdGsk~eg~~~ 196 (455)
T KOG0231|consen 119 TDSGGEEGEE--GTRSGEGVIELPTGDTYEGEFKRGKRSGFGVYIRSDGLKYEGEWLDNRRHGYGVLTFPDGSKYEGQYK 196 (455)
T ss_pred CCcccccccc--cccCccceEecCCCCEEEeeecCCcccccceEEecCCCEeeceecCCCccCCCeEEccCCCEEEEEee
Confidence 3344455544 67889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ee----eccceeEEeeCC----------ceeeeccccC-CCccCCeEEEEccCCEEEEEEeCCeeeeeEEEEEcCCCEEE
Q 040534 139 LN----LKHGLGYQVYPN----------GDVFEGSWIQ-GAAEGPGKYTWANRDVYLGNMKGGKMSGKGTLTWTNGDSFE 203 (822)
Q Consensus 139 ~g----~~~G~G~~~~~n----------G~~YeG~wk~-G~~~G~G~~~~~nG~~Y~G~fkngk~~G~G~~~~~nG~~Ye 203 (822)
++ .++|.+...+.+ ..+|.++|.. +..++.+.+...+|..|.+.|..+..+|.+.++++|+..|.
T Consensus 197 ~~~l~~l~~gk~~~~~~~~~~~a~ra~~~~~~~~Ew~~~~~~~~~~~~e~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 276 (455)
T KOG0231|consen 197 NNILEALRHGKGRYKFDDALEAAQRAATIARYSGEWAARGQSHGRGYAEAADGSAYAGQEDAGVARGLAKLHFPNGSGYV 276 (455)
T ss_pred cccccccccceEEEEEeccchhhhhhhhhhhhhhhhhhhcCCCcceeEEeccccchhhhhhcCccccccceecccccccc
Confidence 99 899999999986 6789999999 99999999999999999999999999999999999999999
Q ss_pred EEEECCeEEEEEEEEEcCCCEEEEEEeCCeeeeeeEEEeCC
Q 040534 204 GSWLNGMMHGFGVYTWSDGGSYVGTWSRGLKDGKGTFYPNG 244 (822)
Q Consensus 204 G~w~nG~~~G~G~~~~~dG~~y~G~w~~G~~~G~G~~y~~g 244 (822)
|.|..+.++|.+++.+.++..+++.|..+.+.|.+.+..+.
T Consensus 277 g~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 317 (455)
T KOG0231|consen 277 GEFKQDKKHGGGQFLFLNGSEYEGWFREGPKSGLGGFTFDK 317 (455)
T ss_pred CcceeccccCcceeeeccccccccccccCccccccccccCC
Confidence 99999999999999999999999999999999999886543
No 12
>KOG0231 consensus Junctional membrane complex protein Junctophilin and related MORN repeat proteins [General function prediction only]
Probab=99.70 E-value=1.8e-17 Score=189.13 Aligned_cols=185 Identities=35% Similarity=0.684 Sum_probs=172.5
Q ss_pred ceeEEEEEcCCCCEEEEEEeCCeeeeeEEEEEcCCcEEEEEEECcEEEEEEEEEecCCCEEEEEEeCC----eEeceeEE
Q 040534 50 GFRVGELALPNGESYSGSLLGNLPEGLGKYIWSDGCIYEGEWRRGMRHGNGKIRWPSGTVYEGEFSGG----YIHGTGTY 125 (822)
Q Consensus 50 ~~~~g~~~~~nG~~Y~G~~~~g~~~G~G~~~~~dG~~YeG~wknGk~~G~G~~~~~nG~~YeGef~~G----~~~G~G~~ 125 (822)
....+...++||++|+|+|.+++++|.|++++++|..|+|+|.++++||+|++.+|+|..|+|.|+++ ..+|.+.+
T Consensus 131 ~~g~g~~~~~~g~~Y~G~~~~~k~sG~Gv~~~~~G~~Y~Gew~~n~~hG~G~~~~pdGsk~eg~~~~~~l~~l~~gk~~~ 210 (455)
T KOG0231|consen 131 RSGEGVIELPTGDTYEGEFKRGKRSGFGVYIRSDGLKYEGEWLDNRRHGYGVLTFPDGSKYEGQYKNNILEALRHGKGRY 210 (455)
T ss_pred cCccceEecCCCCEEEeeecCCcccccceEEecCCCEeeceecCCCccCCCeEEccCCCEEEEEeecccccccccceEEE
Confidence 44567889999999999999999999999999999999999999999999999999999999999999 89999999
Q ss_pred ECCC----------CcEEEEEEee-eeccceeEEeeCCceeeeccccCCCccCCeEEEEccCCEEEEEEeCCeeeeeEEE
Q 040534 126 IGSD----------GLTYKGRWRL-NLKHGLGYQVYPNGDVFEGSWIQGAAEGPGKYTWANRDVYLGNMKGGKMSGKGTL 194 (822)
Q Consensus 126 ~~~d----------G~~Y~G~w~~-g~~~G~G~~~~~nG~~YeG~wk~G~~~G~G~~~~~nG~~Y~G~fkngk~~G~G~~ 194 (822)
.+.+ ..+|.++|.. ...|+.+.....+|..|.+.|..+...|.+++.++++..|.|.|..+.++|.++.
T Consensus 211 ~~~~~~~~a~ra~~~~~~~~Ew~~~~~~~~~~~~e~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~~~~ 290 (455)
T KOG0231|consen 211 KFDDALEAAQRAATIARYSGEWAARGQSHGRGYAEAADGSAYAGQEDAGVARGLAKLHFPNGSGYVGEFKQDKKHGGGQF 290 (455)
T ss_pred EEeccchhhhhhhhhhhhhhhhhhhcCCCcceeEEeccccchhhhhhcCccccccceeccccccccCcceeccccCccee
Confidence 9886 6789999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCEEEEEEECCeEEEEEEEEEcCCC-EEEEEEeCCee
Q 040534 195 TWTNGDSFEGSWLNGMMHGFGVYTWSDGG-SYVGTWSRGLK 234 (822)
Q Consensus 195 ~~~nG~~YeG~w~nG~~~G~G~~~~~dG~-~y~G~w~~G~~ 234 (822)
.+.++..+++.|..+...|.+.++..++. .=.+.|..+..
T Consensus 291 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (455)
T KOG0231|consen 291 LFLNGSEYEGWFREGPKSGLGGFTFDKGPAPRSIPWSSGLP 331 (455)
T ss_pred eeccccccccccccCccccccccccCCCCcccccccccccc
Confidence 99999999999999999999999988876 43455555443
No 13
>COG2849 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.47 E-value=1.7e-05 Score=83.70 Aligned_cols=138 Identities=21% Similarity=0.244 Sum_probs=71.0
Q ss_pred eeeeEEEEEcCCc-EEEEEEECcEEEEEEEEEecCCCEE-EEEEeCCeEeceeEEECCCCcEEEEEEeeeeccceeEEee
Q 040534 73 PEGLGKYIWSDGC-IYEGEWRRGMRHGNGKIRWPSGTVY-EGEFSGGYIHGTGTYIGSDGLTYKGRWRLNLKHGLGYQVY 150 (822)
Q Consensus 73 ~~G~G~~~~~dG~-~YeG~wknGk~~G~G~~~~~nG~~Y-eGef~~G~~~G~G~~~~~dG~~Y~G~w~~g~~~G~G~~~~ 150 (822)
.+|.-..+..||. ...-.++||+++|.-+.++++|... +-.|++|..+|.-+.++++|..
T Consensus 85 ~~g~~~~~~~ng~~~~~~~~kNG~~~g~~~~~y~nGk~~~~~~~~ng~~~G~~~~yy~nG~~------------------ 146 (230)
T COG2849 85 FTGIVEKYYENGELEAAIYYKNGKLDGETKEFYENGKLKSEYNYKNGKLHGIQKEYYENGKL------------------ 146 (230)
T ss_pred CcceeeEeecCCeEEEEEEecCCceeeeEEEEEcCCcEeEEEEecCCcccceEEEEEcCCCE------------------
Confidence 3555555555554 2555556666666555555555443 3344555555555555444432
Q ss_pred CCceeeeccccCCCccCCeEEEEccCC-EEEEEEeCCeeeeeEEEEEcCCC-EEEEEEECCeEEEEEEEEEcCCC-EEEE
Q 040534 151 PNGDVFEGSWIQGAAEGPGKYTWANRD-VYLGNMKGGKMSGKGTLTWTNGD-SFEGSWLNGMMHGFGVYTWSDGG-SYVG 227 (822)
Q Consensus 151 ~nG~~YeG~wk~G~~~G~G~~~~~nG~-~Y~G~fkngk~~G~G~~~~~nG~-~YeG~w~nG~~~G~G~~~~~dG~-~y~G 227 (822)
.++..|++++++|..+.++++|. ..+-.+++|.++|.-..+++||. ..+..|+||+.+|.-.++..+|. +-+.
T Consensus 147 ----~~e~~~kn~~~~g~~k~yy~nGkl~~e~~~knG~~~G~~k~Y~enGkl~~e~~~kng~~~G~~~~yde~G~~i~~~ 222 (230)
T COG2849 147 ----KSETVYKNGKLEGIAKTYYENGKLLSEVPYKNGKKNGVVKIYYENGKLVEEVTYKNGKLDGVVKEYDEAGKLIKET 222 (230)
T ss_pred ----EEEEEEeCCCccccEEEEcCCCcEEEeecccCCcccceEEEEccCCCEeEEEEecCCcccccEEEEecCCCEEEEE
Confidence 23444444444444455555554 34455555555555555555555 45555666666655555555554 2334
Q ss_pred EEeCC
Q 040534 228 TWSRG 232 (822)
Q Consensus 228 ~w~~G 232 (822)
.+++|
T Consensus 223 ~y~~g 227 (230)
T COG2849 223 LYKNG 227 (230)
T ss_pred EeeCC
Confidence 44444
No 14
>COG2849 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.35 E-value=1.6e-05 Score=84.03 Aligned_cols=192 Identities=21% Similarity=0.201 Sum_probs=139.6
Q ss_pred EEEEEcCCCCEEEEEEeCCeeeeeEEEEEcCCcEEE-EEEECcEEEEEEEEEecCCCEEEEEEeCC---eEeceeEEECC
Q 040534 53 VGELALPNGESYSGSLLGNLPEGLGKYIWSDGCIYE-GEWRRGMRHGNGKIRWPSGTVYEGEFSGG---YIHGTGTYIGS 128 (822)
Q Consensus 53 ~g~~~~~nG~~Y~G~~~~g~~~G~G~~~~~dG~~Ye-G~wknGk~~G~G~~~~~nG~~YeGef~~G---~~~G~G~~~~~ 128 (822)
.....+.+|.+.+=...-++.+|.=..++++|.+=. =.+..+..-......+.++. ..+.+..+ ..+|.-..+..
T Consensus 16 ~~~~y~~~g~~~~~~~y~~k~~g~~~~y~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~ 94 (230)
T COG2849 16 VTITYYLNGAIEEKANYVNKLEGKEKLYDEDGKLLSKLDFSAGEEVKSKEEYYDNGT-LKGEYLEGKKTPFTGIVEKYYE 94 (230)
T ss_pred eEEEEecCCCcceeeehhhhcccceEEEccccccccccccCCCceEeeeeEEEecCc-eeEEEecccccCCcceeeEeec
Confidence 344455666543332222277888888888776642 12222322223344444431 22333333 24565555666
Q ss_pred CCc-EEEEEEeeeeccceeEEeeCCceeee-ccccCCCccCCeEEEEccCC-EEEEEEeCCeeeeeEEEEEcCCC-EEEE
Q 040534 129 DGL-TYKGRWRLNLKHGLGYQVYPNGDVFE-GSWIQGAAEGPGKYTWANRD-VYLGNMKGGKMSGKGTLTWTNGD-SFEG 204 (822)
Q Consensus 129 dG~-~Y~G~w~~g~~~G~G~~~~~nG~~Ye-G~wk~G~~~G~G~~~~~nG~-~Y~G~fkngk~~G~G~~~~~nG~-~YeG 204 (822)
+|. ...-.++|++.+|.-...|++|.... -.|++|+.+|.-..+++||. .++..|+++++.|....+++||. ..+-
T Consensus 95 ng~~~~~~~~kNG~~~g~~~~~y~nGk~~~~~~~~ng~~~G~~~~yy~nG~~~~e~~~kn~~~~g~~k~yy~nGkl~~e~ 174 (230)
T COG2849 95 NGELEAAIYYKNGKLDGETKEFYENGKLKSEYNYKNGKLHGIQKEYYENGKLKSETVYKNGKLEGIAKTYYENGKLLSEV 174 (230)
T ss_pred CCeEEEEEEecCCceeeeEEEEEcCCcEeEEEEecCCcccceEEEEEcCCCEEEEEEEeCCCccccEEEEcCCCcEEEee
Confidence 663 46668889999998888999998654 78999999999999999998 68999999999999999999999 5789
Q ss_pred EEECCeEEEEEEEEEcCCC-EEEEEEeCCeeeeeeEEEeCCc
Q 040534 205 SWLNGMMHGFGVYTWSDGG-SYVGTWSRGLKDGKGTFYPNGI 245 (822)
Q Consensus 205 ~w~nG~~~G~G~~~~~dG~-~y~G~w~~G~~~G~G~~y~~g~ 245 (822)
.++||+++|.=..++++|. ..+..|++|+.+|.-..|.+.+
T Consensus 175 ~~knG~~~G~~k~Y~enGkl~~e~~~kng~~~G~~~~yde~G 216 (230)
T COG2849 175 PYKNGKKNGVVKIYYENGKLVEEVTYKNGKLDGVVKEYDEAG 216 (230)
T ss_pred cccCCcccceEEEEccCCCEeEEEEecCCcccccEEEEecCC
Confidence 9999999999999999999 6789999999999999987543
No 15
>smart00698 MORN Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
Probab=97.17 E-value=0.00063 Score=47.05 Aligned_cols=22 Identities=50% Similarity=1.073 Sum_probs=17.3
Q ss_pred EEEEEEECCeEEEEEEEEEcCC
Q 040534 201 SFEGSWLNGMMHGFGVYTWSDG 222 (822)
Q Consensus 201 ~YeG~w~nG~~~G~G~~~~~dG 222 (822)
+|+|+|.+|++||.|+++|+|.
T Consensus 2 ~Y~G~w~~g~~hG~G~~~~~d~ 23 (26)
T smart00698 2 RYEGEWRNGKRHGRGVYTYANX 23 (26)
T ss_pred eEEEEEECCeEEeeEEEEeccc
Confidence 5888888888888888887764
No 16
>smart00698 MORN Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
Probab=96.97 E-value=0.0012 Score=45.60 Aligned_cols=22 Identities=50% Similarity=1.055 Sum_probs=14.8
Q ss_pred EEEEEEECcEEEEEEEEEecCC
Q 040534 86 IYEGEWRRGMRHGNGKIRWPSG 107 (822)
Q Consensus 86 ~YeG~wknGk~~G~G~~~~~nG 107 (822)
+|+|+|++|++||.|++.|+|.
T Consensus 2 ~Y~G~w~~g~~hG~G~~~~~d~ 23 (26)
T smart00698 2 RYEGEWRNGKRHGRGVYTYANX 23 (26)
T ss_pred eEEEEEECCeEEeeEEEEeccc
Confidence 4677777777777777776653
No 17
>PF02493 MORN: MORN repeat; InterPro: IPR003409 The MORN (Membrane Occupation and Recognition Nexus) motif is found in multiple copies in several proteins including junctophilins (). The function of this motif is unknown.; PDB: 1H3I_B 1MT6_A 1N6C_A 3OS5_A 3M53_A 3M55_A 3CBP_A 4E47_B 3M58_A 3CBO_A ....
Probab=96.96 E-value=0.00069 Score=45.16 Aligned_cols=22 Identities=59% Similarity=1.340 Sum_probs=12.4
Q ss_pred EEEEEECCeEEEEEEEEEcCCC
Q 040534 202 FEGSWLNGMMHGFGVYTWSDGG 223 (822)
Q Consensus 202 YeG~w~nG~~~G~G~~~~~dG~ 223 (822)
|+|+|.+|++||.|+++|+||.
T Consensus 1 Y~G~~~~g~~~G~G~~~~~~G~ 22 (23)
T PF02493_consen 1 YEGEWKNGKKHGYGVYTFPDGD 22 (23)
T ss_dssp ECCEEETTEEECEEEEE-TTS-
T ss_pred CEEEEEECcccccEEEEeCCCC
Confidence 5566666666666666666654
No 18
>PF02493 MORN: MORN repeat; InterPro: IPR003409 The MORN (Membrane Occupation and Recognition Nexus) motif is found in multiple copies in several proteins including junctophilins (). The function of this motif is unknown.; PDB: 1H3I_B 1MT6_A 1N6C_A 3OS5_A 3M53_A 3M55_A 3CBP_A 4E47_B 3M58_A 3CBO_A ....
Probab=96.93 E-value=0.00078 Score=44.89 Aligned_cols=22 Identities=50% Similarity=1.214 Sum_probs=10.7
Q ss_pred EEEEEECcEEEEEEEEEecCCC
Q 040534 87 YEGEWRRGMRHGNGKIRWPSGT 108 (822)
Q Consensus 87 YeG~wknGk~~G~G~~~~~nG~ 108 (822)
|+|+|++++++|.|++.|+||+
T Consensus 1 Y~G~~~~g~~~G~G~~~~~~G~ 22 (23)
T PF02493_consen 1 YEGEWKNGKKHGYGVYTFPDGD 22 (23)
T ss_dssp ECCEEETTEEECEEEEE-TTS-
T ss_pred CEEEEEECcccccEEEEeCCCC
Confidence 4455555555555555555543
No 19
>PLN02667 inositol polyphosphate multikinase
Probab=68.81 E-value=10 Score=41.67 Aligned_cols=66 Identities=18% Similarity=0.274 Sum_probs=45.4
Q ss_pred eeCCeEEEEccc-----HHHHHHHHHHhHHHHHHHhcCC------CccccceeeEEEEeeCCCeEEEEEEEeecccCCCc
Q 040534 519 SQDDRFMIKTLR-----KSEVKVLLQMLPTYHDHVRSYE------NTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTELR 587 (822)
Q Consensus 519 T~D~rfiiKti~-----~~E~~~l~~~lp~Y~~h~~~n~------~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~~~ 587 (822)
+.|+-.|+|-+. ..|+++-.. +...+ ..++|+|||...+...+++ .+|||+||-..- .
T Consensus 23 ~~~~g~~~Kp~~~~~rg~rE~~FY~~--------~~~~~~~~~~L~~~~P~y~G~~~~~~~~~~--~~i~LeDLt~g~-~ 91 (286)
T PLN02667 23 VDDSGRFYKPLQDDSRGEREAAFYES--------FSSDTRVPDHIRRFFPVFHGTQLVEASDGS--GLLVLEDLLAGY-T 91 (286)
T ss_pred EcCCCcEEeccCCcccchHHHHHHHH--------HhccccchHHHHhhCcccceeEeeccCCCc--eeEEehHHhcCC-C
Confidence 457778899997 788877544 33332 2578999999888765555 579999996432 2
Q ss_pred eeeEEEec
Q 040534 588 IHRRFDLK 595 (822)
Q Consensus 588 i~~~yDLK 595 (822)
---.=|||
T Consensus 92 ~PcVlDlK 99 (286)
T PLN02667 92 KPCVMDVK 99 (286)
T ss_pred CCeEEEEE
Confidence 22356777
No 20
>PF07202 Tcp10_C: T-complex protein 10 C-terminus; InterPro: IPR009852 Proteins in this entry include T-complex 10, involved in spermatogenesis in mice, and centromere protein J, which not only inhibits microtubule nucleation from the centrosome, but also depolymerises taxol-stabilised microtubules [, ]. These proteins share an approximately 180 residue C-terminal region which contains unsual G repreats [].
Probab=59.38 E-value=65 Score=33.01 Aligned_cols=12 Identities=25% Similarity=0.529 Sum_probs=5.2
Q ss_pred EEEEEEEEecCC
Q 040534 96 RHGNGKIRWPSG 107 (822)
Q Consensus 96 ~~G~G~~~~~nG 107 (822)
++|.-.+.||||
T Consensus 63 pdG~ev~~Fpng 74 (179)
T PF07202_consen 63 PDGLEVYEFPNG 74 (179)
T ss_pred CCCcEEEEeCCC
Confidence 333344444444
No 21
>PF07202 Tcp10_C: T-complex protein 10 C-terminus; InterPro: IPR009852 Proteins in this entry include T-complex 10, involved in spermatogenesis in mice, and centromere protein J, which not only inhibits microtubule nucleation from the centrosome, but also depolymerises taxol-stabilised microtubules [, ]. These proteins share an approximately 180 residue C-terminal region which contains unsual G repreats [].
Probab=58.88 E-value=2.2e+02 Score=29.22 Aligned_cols=12 Identities=25% Similarity=0.423 Sum_probs=5.0
Q ss_pred cCCeEEEEccCC
Q 040534 166 EGPGKYTWANRD 177 (822)
Q Consensus 166 ~G~G~~~~~nG~ 177 (822)
+|.-...++||.
T Consensus 118 nG~k~i~~pnGq 129 (179)
T PF07202_consen 118 NGDKTITFPNGQ 129 (179)
T ss_pred CCcEEEEeCCCc
Confidence 333344444444
No 22
>PF12226 Astro_capsid_p: Turkey astrovirus capsid protein; InterPro: IPR022027 This family of proteins is found in viruses. Proteins in this family are typically between 241 and 261 amino acids in length. These proteins are capsid proteins from various astrovirus strains. ; PDB: 3TS3_D.
Probab=48.81 E-value=7.3 Score=38.94 Aligned_cols=48 Identities=21% Similarity=0.590 Sum_probs=27.8
Q ss_pred EEcCHHHH---HHHHHHcCCCHHHHHHhhcCCccccccCCCCCcceeEEEeeCCeEEEE
Q 040534 472 KDYCPMVF---RNLREMFKIDAADYMMSICGNDALRELSSPGKSGSIFFLSQDDRFMIK 527 (822)
Q Consensus 472 k~y~P~vF---~~LR~~~~i~~~~y~~Sl~~~~~l~~~~s~GKSGs~F~~T~D~rfiiK 527 (822)
+-|.|..= ..|..+.++.+-|=+.|+. .+.|+-+++||.|.|.||||=
T Consensus 103 kkYyP~TTnld~~lK~RlnL~EgDPViS~G--------Dt~GRRaALFYRtSdEr~ill 153 (230)
T PF12226_consen 103 KKYYPGTTNLDQQLKDRLNLTEGDPVISMG--------DTTGRRAALFYRTSDERYILL 153 (230)
T ss_dssp EEB-GGG--S-HHHHHHHT--TT-EEEEEE--------ETT--EEEEEEETTTTEEEEE
T ss_pred hhcCCCCccHHHHHHHhhccccCCceeeec--------CCCCceEEEEEeccCceEEEE
Confidence 45555332 3566666666544444443 357999999999999999973
No 23
>PF14977 FAM194: FAM194 protein
Probab=33.12 E-value=1.9e+02 Score=30.39 Aligned_cols=55 Identities=11% Similarity=0.224 Sum_probs=27.1
Q ss_pred ccCCeEEEEccCCEEEEEEeCCeeeeeEEEEEcCCC--EEEEEEECCeEEEEEEEEEcCCC
Q 040534 165 AEGPGKYTWANRDVYLGNMKGGKMSGKGTLTWTNGD--SFEGSWLNGMMHGFGVYTWSDGG 223 (822)
Q Consensus 165 ~~G~G~~~~~nG~~Y~G~fkngk~~G~G~~~~~nG~--~YeG~w~nG~~~G~G~~~~~dG~ 223 (822)
.+|-|..+|++|++=+-.... +..+.-...+.|.. ..-+.|. .+|.|++++++|.
T Consensus 22 ~DGsg~i~YPSGnlAi~~~~~-~~~~~~~~v~eD~~~~~ilA~Fd---~~G~g~~y~~~g~ 78 (208)
T PF14977_consen 22 PDGSGQIFYPSGNLAICISPT-CRGGFTYIVYEDSPENTILALFD---SSGHGTCYHPNGN 78 (208)
T ss_pred CCCCEEEEeCCCCEEEEEecc-CCCceEEEEEecCCCCceEEEEc---CCCCEEEEcCCCC
Confidence 445666666666644333333 33334444444433 2334443 3466666666665
No 24
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=32.14 E-value=1.7e+02 Score=29.28 Aligned_cols=73 Identities=14% Similarity=0.229 Sum_probs=40.2
Q ss_pred CCCCCcceeEEEee-CCeEEEEcccHHHHHHHHHHhHHHHHHHhcCCCccccceeeEEEEeeCCCeEEEEEEEeecc
Q 040534 507 SSPGKSGSIFFLSQ-DDRFMIKTLRKSEVKVLLQMLPTYHDHVRSYENTLITKFFGLHRIKPSSGQKFRFVVMGNMF 582 (822)
Q Consensus 507 ~s~GKSGs~F~~T~-D~rfiiKti~~~E~~~l~~~lp~Y~~h~~~n~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf 582 (822)
.++|.++..|.++. +++||||.........-+..--..++++.++.- -++++++.-..... ....+++|+.+-
T Consensus 5 l~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~-pvP~~~~~~~~~~~--~~~~~~~~~~i~ 78 (239)
T PF01636_consen 5 LSGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEHGI-PVPRVLAFDTSDEF--NGFPYLLMEYIP 78 (239)
T ss_dssp EEESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHTTS-BS--EEEEEEETEE--TSEEEEEEEEES
T ss_pred CCCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCC-CCceEEeecccccc--cccceEEEEEec
Confidence 34577775555554 569999999776333222222344566665432 57788753322221 223688888764
No 25
>PF07661 MORN_2: MORN repeat variant; InterPro: IPR011652 This entry represents an apparent variant of the IPR003409 from INTERPRO repeat.
Probab=31.65 E-value=69 Score=20.34 Aligned_cols=11 Identities=27% Similarity=0.519 Sum_probs=4.5
Q ss_pred EEEEEEecCCC
Q 040534 98 GNGKIRWPSGT 108 (822)
Q Consensus 98 G~G~~~~~nG~ 108 (822)
|.-+.+++||.
T Consensus 3 G~~~~yy~nG~ 13 (22)
T PF07661_consen 3 GEWKFYYENGK 13 (22)
T ss_pred ceEEEEeCCCC
Confidence 33344444443
No 26
>PF14977 FAM194: FAM194 protein
Probab=26.88 E-value=3.1e+02 Score=28.89 Aligned_cols=12 Identities=42% Similarity=0.659 Sum_probs=6.0
Q ss_pred cceeEEeeCCce
Q 040534 143 HGLGYQVYPNGD 154 (822)
Q Consensus 143 ~G~G~~~~~nG~ 154 (822)
+|.|..++++|.
T Consensus 67 ~G~g~~y~~~g~ 78 (208)
T PF14977_consen 67 SGHGTCYHPNGN 78 (208)
T ss_pred CCCEEEEcCCCC
Confidence 445555555543
No 27
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=26.07 E-value=3.9e+02 Score=29.40 Aligned_cols=103 Identities=14% Similarity=0.209 Sum_probs=54.5
Q ss_pred CCCcceeEEEee---CCeEEEEcccHHHHHHHHHHhHHHHHHHhcCCCccccceeeEEEEeeCCCeEEEEEEEeecccCC
Q 040534 509 PGKSGSIFFLSQ---DDRFMIKTLRKSEVKVLLQMLPTYHDHVRSYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTE 585 (822)
Q Consensus 509 ~GKSGs~F~~T~---D~rfiiKti~~~E~~~l~~~lp~Y~~h~~~n~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~ 585 (822)
.|..|..|.... ...+.||.+.......+.+.+..=.+-+..-.+.-|+++++++.. ....++||+.+-..
T Consensus 84 ~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~- 157 (353)
T PLN00034 84 SGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDH-----NGEIQVLLEFMDGG- 157 (353)
T ss_pred CCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-----CCeEEEEEecCCCC-
Confidence 355677765543 467999998543222222212122222333334457788887632 22346788754211
Q ss_pred CceeeEEEecCCCCCCCCCCcccCcccccccCCCCceeecChHHHHHHHHHhhhhHHHHhhCCc
Q 040534 586 LRIHRRFDLKGSSLGRSTDNIEIDENTTLKDLDLNYCFYLEPSWREDLLKQIEIDSKFLEAQQI 649 (822)
Q Consensus 586 ~~i~~~yDLKGS~~~R~~~~~~~~~~~~lKDld~~~~~~l~~~~~~~l~~ql~~D~~FL~~~~i 649 (822)
+|++ + ..+.......++.||-.=.+||.+.+|
T Consensus 158 -------~L~~----~---------------------~~~~~~~~~~i~~qi~~aL~~LH~~~i 189 (353)
T PLN00034 158 -------SLEG----T---------------------HIADEQFLADVARQILSGIAYLHRRHI 189 (353)
T ss_pred -------cccc----c---------------------ccCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 1111 0 012233445677888888899998875
No 28
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=24.65 E-value=3.6e+02 Score=28.41 Aligned_cols=115 Identities=13% Similarity=0.114 Sum_probs=61.6
Q ss_pred CCCCcceeEEEe---eCCeEEEEcccHHHHHHHHHHhHHHHHHHhcCCCccccceeeEEEEeeCCCeEEEEEEEeecccC
Q 040534 508 SPGKSGSIFFLS---QDDRFMIKTLRKSEVKVLLQMLPTYHDHVRSYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCT 584 (822)
Q Consensus 508 s~GKSGs~F~~T---~D~rfiiKti~~~E~~~l~~~lp~Y~~h~~~n~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~ 584 (822)
+.|..|.+|... .+..+.+|++..........-+..-.+-+..-.+.-|++++|.|.... ....++||+.+-..
T Consensus 10 g~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---~~~~~lv~e~~~~~ 86 (287)
T cd06621 10 GEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDES---SSSIGIAMEYCEGG 86 (287)
T ss_pred ccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccC---CCeEEEEEEecCCC
Confidence 446666665443 357799999875433222222222233444333456888999885432 23457899865321
Q ss_pred CCceeeEEEecCCCCCCCCCCcccCcccccccCCCCceeecChHHHHHHHHHhhhhHHHHhhCCcc
Q 040534 585 ELRIHRRFDLKGSSLGRSTDNIEIDENTTLKDLDLNYCFYLEPSWREDLLKQIEIDSKFLEAQQIM 650 (822)
Q Consensus 585 ~~~i~~~yDLKGS~~~R~~~~~~~~~~~~lKDld~~~~~~l~~~~~~~l~~ql~~D~~FL~~~~im 650 (822)
. +... |+ +.. .....+.......++.||-.-..+|.+.+|+
T Consensus 87 ~--L~~~--l~-----~~~----------------~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~ 127 (287)
T cd06621 87 S--LDSI--YK-----KVK----------------KRGGRIGEKVLGKIAESVLKGLSYLHSRKII 127 (287)
T ss_pred C--HHHH--HH-----HHH----------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 1 1100 00 000 0011234455677888999999999987643
No 29
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=23.71 E-value=2.2e+02 Score=27.22 Aligned_cols=108 Identities=18% Similarity=0.235 Sum_probs=63.5
Q ss_pred CCCcceeEEEee---CCeEEEEcccHHHHHHHHHHhHHHHHHHhcCCCccccceeeEEEEeeCCCeEEEEEEEeecccCC
Q 040534 509 PGKSGSIFFLSQ---DDRFMIKTLRKSEVKVLLQMLPTYHDHVRSYENTLITKFFGLHRIKPSSGQKFRFVVMGNMFCTE 585 (822)
Q Consensus 509 ~GKSGs~F~~T~---D~rfiiKti~~~E~~~l~~~lp~Y~~h~~~n~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nlf~~~ 585 (822)
.|..|..|-... +.+++||...........+.+.+-++.+..-.+.-++++++..... ...++||+.+-..
T Consensus 3 ~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~~~~e~~~~~- 76 (215)
T cd00180 3 EGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE-----NHLYLVMEYCEGG- 76 (215)
T ss_pred cCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC-----CeEEEEEecCCCC-
Confidence 466777776665 4789999998776543333344444444433445566666655432 3567888865321
Q ss_pred CceeeEEEecCCCCCCCCCCcccCcccccccCCCCceeecChHHHHHHHHHhhhhHHHHhhCCc
Q 040534 586 LRIHRRFDLKGSSLGRSTDNIEIDENTTLKDLDLNYCFYLEPSWREDLLKQIEIDSKFLEAQQI 649 (822)
Q Consensus 586 ~~i~~~yDLKGS~~~R~~~~~~~~~~~~lKDld~~~~~~l~~~~~~~l~~ql~~D~~FL~~~~i 649 (822)
.+....+.+ ...+.......++.+|-+=..+|.+.++
T Consensus 77 -~l~~~~~~~--------------------------~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 113 (215)
T cd00180 77 -SLKDLLKEN--------------------------EGKLSEDEILRILLQILEGLEYLHSNGI 113 (215)
T ss_pred -cHHHHHHhc--------------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 111100000 0234567788888999888889988864
No 30
>PRK10345 hypothetical protein; Provisional
Probab=21.60 E-value=2.9e+02 Score=28.79 Aligned_cols=70 Identities=16% Similarity=0.206 Sum_probs=39.8
Q ss_pred CCCCcceeEEEeeCCeEEEEcccHH---HHHHHHHHhHHHHHHHhc--CCCccccceeeEEEEeeCCCeEEEEEEEe
Q 040534 508 SPGKSGSIFFLSQDDRFMIKTLRKS---EVKVLLQMLPTYHDHVRS--YENTLITKFFGLHRIKPSSGQKFRFVVMG 579 (822)
Q Consensus 508 s~GKSGs~F~~T~D~rfiiKti~~~---E~~~l~~~lp~Y~~h~~~--n~~tLL~k~~Gl~~i~~~~~~~~~fvVM~ 579 (822)
..|..+..|--..|...+||.+... ..+.+++-+ .|+..+.. ..+.-|+++||.+.-.. +.-.+..+||+
T Consensus 11 G~G~~~~Vy~hp~~~~k~IKv~~~~~~~~~~~~~rEi-~~l~~L~~~~~~h~nIvr~yg~~et~~-g~g~v~~~I~e 85 (210)
T PRK10345 11 GTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRREL-KYYAHLSRRLIDWSGIPRYYGTVETDC-GTGYVYDVIAD 85 (210)
T ss_pred cCCCceEEEECCCCcCeEEEEEeccccchHHHHHHHH-HHHHHhhccCCCCcccceeeEEEEeCC-CCeEEEEEEec
Confidence 3466788886556888899988653 222222211 24555532 12344999999986542 22234446776
No 31
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=20.68 E-value=5.4e+02 Score=26.29 Aligned_cols=109 Identities=14% Similarity=0.107 Sum_probs=60.6
Q ss_pred CCCCcceeEEEee---CC---eEEEEcccHHHHHHHHHHhHHHHHHHhcCCCccccceeeEEEEeeCCCeEEEEEEEeec
Q 040534 508 SPGKSGSIFFLSQ---DD---RFMIKTLRKSEVKVLLQMLPTYHDHVRSYENTLITKFFGLHRIKPSSGQKFRFVVMGNM 581 (822)
Q Consensus 508 s~GKSGs~F~~T~---D~---rfiiKti~~~E~~~l~~~lp~Y~~h~~~n~~tLL~k~~Gl~~i~~~~~~~~~fvVM~Nl 581 (822)
+.|-.|..|--.. .+ .+.||.+++.......+-++.-..-+..-.+.-+++++|.+.- ...++||+.+
T Consensus 4 g~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~e~~ 77 (257)
T cd05040 4 GDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMVTELA 77 (257)
T ss_pred CccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEEEEec
Confidence 3455666664332 22 4899999887764333333333444444444557888887642 4468899865
Q ss_pred ccCCCceeeEEEecCCCCCCCCCCcccCcccccccCCCCceeecChHHHHHHHHHhhhhHHHHhhCCc
Q 040534 582 FCTELRIHRRFDLKGSSLGRSTDNIEIDENTTLKDLDLNYCFYLEPSWREDLLKQIEIDSKFLEAQQI 649 (822)
Q Consensus 582 f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~lKDld~~~~~~l~~~~~~~l~~ql~~D~~FL~~~~i 649 (822)
.... +. . .+.+... -.+.......++.||-.=++||.+.+|
T Consensus 78 ~~~~--L~------~----------------~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~i 118 (257)
T cd05040 78 PLGS--LL------D----------------RLRKDAL---GHFLISTLCDYAVQIANGMRYLESKRF 118 (257)
T ss_pred CCCc--HH------H----------------HHHhccc---ccCcHHHHHHHHHHHHHHHHHHHhCCc
Confidence 3221 10 0 0000000 123455666777888888899998765
No 32
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=20.61 E-value=5.3e+02 Score=26.38 Aligned_cols=115 Identities=16% Similarity=0.210 Sum_probs=62.7
Q ss_pred CCCCcceeEEEee---CCeEEEEcccHHHHHHHHHHhHHHHHHHhcC-CCccccceeeEEEEeeC-CCeEEEEEEEeecc
Q 040534 508 SPGKSGSIFFLSQ---DDRFMIKTLRKSEVKVLLQMLPTYHDHVRSY-ENTLITKFFGLHRIKPS-SGQKFRFVVMGNMF 582 (822)
Q Consensus 508 s~GKSGs~F~~T~---D~rfiiKti~~~E~~~l~~~lp~Y~~h~~~n-~~tLL~k~~Gl~~i~~~-~~~~~~fvVM~Nlf 582 (822)
..|..|..|.... +..++||.++..+... +.+..-..-+..- .+.-+++++|.+.-... ......+|||+.+-
T Consensus 15 ~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~ 92 (275)
T cd06608 15 GEGTYGKVYKARHKKTGQLVAIKIMDIIEDEE--EEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCG 92 (275)
T ss_pred cCCCCeEEEEEEECCCCcEEEEEEEecCchhH--HHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCC
Confidence 3455666665443 3579999986543311 1122222333322 34678889998865432 23456789998643
Q ss_pred cCCCceeeEEEecCCCCCCCCCCcccCcccccccCCCCceeecChHHHHHHHHHhhhhHHHHhhCCc
Q 040534 583 CTELRIHRRFDLKGSSLGRSTDNIEIDENTTLKDLDLNYCFYLEPSWREDLLKQIEIDSKFLEAQQI 649 (822)
Q Consensus 583 ~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~lKDld~~~~~~l~~~~~~~l~~ql~~D~~FL~~~~i 649 (822)
... +.. +- .+.. ...-.+.......++.||-.=.+||.+.+|
T Consensus 93 ~~~--L~~---~~----~~~~----------------~~~~~~~~~~~~~~~~ql~~al~~lH~~~i 134 (275)
T cd06608 93 GGS--VTD---LV----KGLR----------------KKGKRLKEEWIAYILRETLRGLAYLHENKV 134 (275)
T ss_pred CCc--HHH---HH----HHHh----------------hcCCCCCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 211 100 00 0000 001124566777888999999999998875
Done!