BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040540
(669 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 199/425 (46%), Gaps = 59/425 (13%)
Query: 53 VTALNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKE-LGQLRRLRVMSLAYNKL 111
+T L+LS G +P FG+ S L SL +S NNF G LP + L ++R L+V+ L++N+
Sbjct: 293 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 352
Query: 112 SGSFPSWIGVLSK---------------------------LRILRLDYNNFTGPIPNSLF 144
SG P + LS L+ L L N FTG IP +L
Sbjct: 353 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 412
Query: 145 NLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSXXXXXXXXXXX 204
N S L L FN + GTIPS +G+L KL +L LW L+G+IP E+
Sbjct: 413 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 472
Query: 205 XXXSGLIPPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSI 264
+G IP + N + + ++L +N+L+G +P IG L N+ L LS N+ G IP +
Sbjct: 473 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR-LENLAILKLSNNSFSGNIPAEL 531
Query: 265 TNATKLIGLDLGFNSFSGHIP------------NTFGNLRHLSVLNVMM--------NNL 304
+ LI LDL N F+G IP N R++ + N M N L
Sbjct: 532 GDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLL 591
Query: 305 TTESSSADQWSFLSSLTNCRXXXXXXXXXXPLGGILPQLIGNFSASLQNIYAFELGFNDL 364
+ ++Q + LS+ C G P N S + ++ +N L
Sbjct: 592 EFQGIRSEQLNRLSTRNPCNITSRVYG-----GHTSPTFDNNGS-----MMFLDMSYNML 641
Query: 365 NGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGHIPPCLASLT 424
+G IP IG++ L + N++ G +P ++ L LNIL+LS NKL G IP +++LT
Sbjct: 642 SGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALT 701
Query: 425 SLREL 429
L E+
Sbjct: 702 MLTEI 706
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 160/358 (44%), Gaps = 22/358 (6%)
Query: 73 NLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDY 132
NL FL D+S NNF +P LG L+ + ++ NKLSG F I ++L++L +
Sbjct: 198 NLEFL---DVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 253
Query: 133 NNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRI-GNLRKLVNLGLWSCNLQGQIPTEI 191
N F GPIP L L+ L N G IP + G L L L + G +P
Sbjct: 254 NQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 311
Query: 192 GSXXXXXXXXXXXXXXSGLIP-PTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLA 250
GS SG +P T+ + +++L L N+ SG LP ++ + ++ L
Sbjct: 312 GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLD 371
Query: 251 LSTNNLIGKI-PNSITNATK-LIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTTES 308
LS+NN G I PN N L L L N F+G IP T N L L++ N L+
Sbjct: 372 LSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 431
Query: 309 SSADQWSFLSSLTNCRXXXXXXXXXXPLGGILPQLIGNFSASLQNIYAFELGFNDLNGTI 368
S+ L SL+ R L G +PQ + ++ + L FNDL G I
Sbjct: 432 PSS-----LGSLSKLRDLKLWLNM---LEGEIPQEL----MYVKTLETLILDFNDLTGEI 479
Query: 369 PTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGHIPPCLASLTSL 426
P+ + L + N L G +P + LE L IL LS N SG+IP L SL
Sbjct: 480 PSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 537
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 166/423 (39%), Gaps = 96/423 (22%)
Query: 46 CGSRHQRVTALNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMS 105
C + + L L + G G IP N S LVSL +S N G +P LG L +LR +
Sbjct: 386 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 445
Query: 106 LAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPS 165
L N L G P + + L L LD+N+ TG IP+ L N + L + N + G IP
Sbjct: 446 LWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 505
Query: 166 RIGNLRKLVNLGLWSCNLQGQIPTEIGSXXXXXXXXXXXXXXSGLIPPTIFN-------- 217
IG L L L L + + G IP E+G +G IP +F
Sbjct: 506 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 565
Query: 218 -ISTMRILTLES------------------------NQLSGRLPSTI------GHSLRNI 246
I+ R + +++ N+LS R P I GH+
Sbjct: 566 FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 625
Query: 247 E------YLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGNLRHLSVLNVM 300
+ +L +S N L G IP I + L L+LG N SG IP+ G+LR L++L++
Sbjct: 626 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 685
Query: 301 MNNLTTESSSADQWSFLSSLTNCRXXXXXXXXXXPLGGILPQLIGNFSASLQNIYAFELG 360
N L G +PQ + ++L + +L
Sbjct: 686 SNKLD--------------------------------GRIPQAM----SALTMLTEIDLS 709
Query: 361 FNDLNGTIPTSIGTLQQ-----------LQGFYVPE---NNLQGYVPHDLCHLERLNILN 406
N+L+G IP +G + L G+ +P +N GY H H RL L
Sbjct: 710 NNNLSGPIP-EMGQFETFPPAKFLNNPGLCGYPLPRCDPSNADGYAHHQRSHGRRLENLY 768
Query: 407 LSG 409
G
Sbjct: 769 FQG 771
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 184/457 (40%), Gaps = 89/457 (19%)
Query: 14 LLAFKAHAFDYRSALANNWSISYPICSWAGISCGSRHQRVTALNLSDMGLG--------- 64
L++FK D L +WS + C++ G++C R +VT+++LS L
Sbjct: 14 LISFKDVLPDKN--LLPDWSSNKNPCTFDGVTC--RDDKVTSIDLSSKPLNVGFSAVSSS 69
Query: 65 ------------------GTIPLHFGNLSFLVSLDISENNFHGHLPK--ELGQLRRLRVM 104
G++ F + L SLD+S N+ G + LG L+ +
Sbjct: 70 LLSLTGLESLFLSNSHINGSVS-GFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFL 128
Query: 105 SLAYNKLSGSFPSWIG---VLSKLRILRLDYNNFTGPIPNSLF---NLSRLEMLRAEFNI 158
+++ N L FP + L+ L +L L N+ +G L+ L N
Sbjct: 129 NVSSNTLD--FPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNK 186
Query: 159 IGGTIP-SRIGNLRKLVNLGLWSCNLQGQIPTEIGSXXXXXXXXXXXXXXSGLIPPTIFN 217
I G + SR NL L + S N IP +G SG I
Sbjct: 187 ISGDVDVSRCVNLEFL---DVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAIST 242
Query: 218 ISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATK-LIGLDLG 276
+ +++L + SNQ G +P L++++YL+L+ N G+IP+ ++ A L GLDL
Sbjct: 243 CTELKLLNISSNQFVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLS 299
Query: 277 FNSFSGHIPNTFGNLRHLSVLNVMMNNLTTESSSADQWSFLSSLTNCRXXXXXXXXXXPL 336
N F G +P FG+ L L + NN + E P+
Sbjct: 300 GNHFYGAVPPFFGSCSLLESLALSSNNFSGE--------------------------LPM 333
Query: 337 GGILPQLIGNFSASLQNIYAFELGFNDLNGTIPTSIGTLQ-QLQGFYVPENNLQGYVPHD 395
+L ++ + +L FN+ +G +P S+ L L + NN G + +
Sbjct: 334 DTLL---------KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 396 LCHLER--LNILNLSGNKLSGHIPPCLASLTSLRELH 430
LC + L L L N +G IPP L++ + L LH
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLH 421
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 199/425 (46%), Gaps = 59/425 (13%)
Query: 53 VTALNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKE-LGQLRRLRVMSLAYNKL 111
+T L+LS G +P FG+ S L SL +S NNF G LP + L ++R L+V+ L++N+
Sbjct: 296 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355
Query: 112 SGSFPSWIGVLSK---------------------------LRILRLDYNNFTGPIPNSLF 144
SG P + LS L+ L L N FTG IP +L
Sbjct: 356 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 415
Query: 145 NLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSXXXXXXXXXXX 204
N S L L FN + GTIPS +G+L KL +L LW L+G+IP E+
Sbjct: 416 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 475
Query: 205 XXXSGLIPPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSI 264
+G IP + N + + ++L +N+L+G +P IG L N+ L LS N+ G IP +
Sbjct: 476 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR-LENLAILKLSNNSFSGNIPAEL 534
Query: 265 TNATKLIGLDLGFNSFSGHIP------------NTFGNLRHLSVLNVMM--------NNL 304
+ LI LDL N F+G IP N R++ + N M N L
Sbjct: 535 GDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLL 594
Query: 305 TTESSSADQWSFLSSLTNCRXXXXXXXXXXPLGGILPQLIGNFSASLQNIYAFELGFNDL 364
+ ++Q + LS+ C G P N S + ++ +N L
Sbjct: 595 EFQGIRSEQLNRLSTRNPCNITSRVYG-----GHTSPTFDNNGS-----MMFLDMSYNML 644
Query: 365 NGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGHIPPCLASLT 424
+G IP IG++ L + N++ G +P ++ L LNIL+LS NKL G IP +++LT
Sbjct: 645 SGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALT 704
Query: 425 SLREL 429
L E+
Sbjct: 705 MLTEI 709
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 160/358 (44%), Gaps = 22/358 (6%)
Query: 73 NLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDY 132
NL FL D+S NNF +P LG L+ + ++ NKLSG F I ++L++L +
Sbjct: 201 NLEFL---DVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 256
Query: 133 NNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRI-GNLRKLVNLGLWSCNLQGQIPTEI 191
N F GPIP L L+ L N G IP + G L L L + G +P
Sbjct: 257 NQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 314
Query: 192 GSXXXXXXXXXXXXXXSGLIP-PTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLA 250
GS SG +P T+ + +++L L N+ SG LP ++ + ++ L
Sbjct: 315 GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLD 374
Query: 251 LSTNNLIGKI-PNSITNATK-LIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTTES 308
LS+NN G I PN N L L L N F+G IP T N L L++ N L+
Sbjct: 375 LSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 434
Query: 309 SSADQWSFLSSLTNCRXXXXXXXXXXPLGGILPQLIGNFSASLQNIYAFELGFNDLNGTI 368
S+ L SL+ R L G +PQ + ++ + L FNDL G I
Sbjct: 435 PSS-----LGSLSKLRDLKLWLNM---LEGEIPQEL----MYVKTLETLILDFNDLTGEI 482
Query: 369 PTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGHIPPCLASLTSL 426
P+ + L + N L G +P + LE L IL LS N SG+IP L SL
Sbjct: 483 PSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 540
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 130/304 (42%), Gaps = 45/304 (14%)
Query: 46 CGSRHQRVTALNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMS 105
C + + L L + G G IP N S LVSL +S N G +P LG L +LR +
Sbjct: 389 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 448
Query: 106 LAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPS 165
L N L G P + + L L LD+N+ TG IP+ L N + L + N + G IP
Sbjct: 449 LWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 508
Query: 166 RIGNLRKLVNLGLWSCNLQGQIPTEIGSXXXXXXXXXXXXXXSGLIPPTIFN-------- 217
IG L L L L + + G IP E+G +G IP +F
Sbjct: 509 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 568
Query: 218 -ISTMRILTLES------------------------NQLSGRLPSTI------GHSLRNI 246
I+ R + +++ N+LS R P I GH+
Sbjct: 569 FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 628
Query: 247 E------YLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGNLRHLSVLNVM 300
+ +L +S N L G IP I + L L+LG N SG IP+ G+LR L++L++
Sbjct: 629 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 688
Query: 301 MNNL 304
N L
Sbjct: 689 SNKL 692
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 184/457 (40%), Gaps = 89/457 (19%)
Query: 14 LLAFKAHAFDYRSALANNWSISYPICSWAGISCGSRHQRVTALNLSDMGLG--------- 64
L++FK D L +WS + C++ G++C R +VT+++LS L
Sbjct: 17 LISFKDVLPDKN--LLPDWSSNKNPCTFDGVTC--RDDKVTSIDLSSKPLNVGFSAVSSS 72
Query: 65 ------------------GTIPLHFGNLSFLVSLDISENNFHGHLPK--ELGQLRRLRVM 104
G++ F + L SLD+S N+ G + LG L+ +
Sbjct: 73 LLSLTGLESLFLSNSHINGSVS-GFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFL 131
Query: 105 SLAYNKLSGSFPSWIG---VLSKLRILRLDYNNFTGPIPNSLF---NLSRLEMLRAEFNI 158
+++ N L FP + L+ L +L L N+ +G L+ L N
Sbjct: 132 NVSSNTLD--FPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNK 189
Query: 159 IGGTIP-SRIGNLRKLVNLGLWSCNLQGQIPTEIGSXXXXXXXXXXXXXXSGLIPPTIFN 217
I G + SR NL L + S N IP +G SG I
Sbjct: 190 ISGDVDVSRCVNLEFL---DVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAIST 245
Query: 218 ISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATK-LIGLDLG 276
+ +++L + SNQ G +P L++++YL+L+ N G+IP+ ++ A L GLDL
Sbjct: 246 CTELKLLNISSNQFVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLS 302
Query: 277 FNSFSGHIPNTFGNLRHLSVLNVMMNNLTTESSSADQWSFLSSLTNCRXXXXXXXXXXPL 336
N F G +P FG+ L L + NN + E P+
Sbjct: 303 GNHFYGAVPPFFGSCSLLESLALSSNNFSGE--------------------------LPM 336
Query: 337 GGILPQLIGNFSASLQNIYAFELGFNDLNGTIPTSIGTLQ-QLQGFYVPENNLQGYVPHD 395
+L ++ + +L FN+ +G +P S+ L L + NN G + +
Sbjct: 337 DTLL---------KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 396 LCHLER--LNILNLSGNKLSGHIPPCLASLTSLRELH 430
LC + L L L N +G IPP L++ + L LH
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLH 424
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 121/276 (43%), Gaps = 37/276 (13%)
Query: 40 SWAGISCGSRHQ--RVTALNLSDMGLGGT--IPLHFGNLSFLVSLDISE-NNFHGHLPKE 94
+W G+ C + Q RV L+LS + L IP NL +L L I NN G +P
Sbjct: 37 TWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPA 96
Query: 95 LGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLEMLRA 154
+ +L +L + + + +SG+ P ++ + L L YN +G +P S+ +L L +
Sbjct: 97 IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156
Query: 155 EFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSXXXXXXXXXXXXXXSGLIPPT 214
+ N I G IP G+ KL S N +G IPPT
Sbjct: 157 DGNRISGAIPDSYGSFSKLFTSMTISRN-----------------------RLTGKIPPT 193
Query: 215 IFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNL---IGKIPNSITNATKLI 271
N++ + + L N L G S + S +N + + L+ N+L +GK+ S L
Sbjct: 194 FANLN-LAFVDLSRNMLEGDA-SVLFGSDKNTQKIHLAKNSLAFDLGKVGLS----KNLN 247
Query: 272 GLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTTE 307
GLDL N G +P L+ L LNV NNL E
Sbjct: 248 GLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 121/311 (38%), Gaps = 72/311 (23%)
Query: 117 SWIGVL--SKLRILRLDYNNFTG-------PIPNSLFNLSRLEMLR-AEFNIIGGTIPSR 166
+W+GVL + + R++ + +G PIP+SL NL L L N + G IP
Sbjct: 37 TWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPA 96
Query: 167 IGNLRKLVNLGLWSCNLQGQIPTEIGSXXXXXXXXXXXXXXSGLIPPTIFNISTMRILTL 226
I L +L L + N+ G IP + SG +PP+I ++ + +T
Sbjct: 97 IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156
Query: 227 ESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPN 286
+ N++SG +P + G + + +S N L GKIP + N L +DL N G
Sbjct: 157 DGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASV 215
Query: 287 TFGNLRHLSVLNVMMNNLTTESSSADQWSFLSSLTNCRXXXXXXXXXXPLGGILPQLIGN 346
FG+ ++ +++
Sbjct: 216 LFGSDKNTQKIHLA---------------------------------------------- 229
Query: 347 FSASLQNIYAFELGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILN 406
+N AF+LG +G + L G + N + G +P L L+ L+ LN
Sbjct: 230 -----KNSLAFDLG----------KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN 274
Query: 407 LSGNKLSGHIP 417
+S N L G IP
Sbjct: 275 VSFNNLCGEIP 285
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 360 GFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGHIPPC 419
G N+L G IP +I L QL Y+ N+ G +P L ++ L L+ S N LSG +PP
Sbjct: 85 GINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS 144
Query: 420 LASLTSL 426
++SL +L
Sbjct: 145 ISSLPNL 151
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 344 IGNFSASLQNIYAFELGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERL- 402
I +F + ++ + + +N L+GT+P SI +L L G N + G +P +L
Sbjct: 117 IPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLF 176
Query: 403 NILNLSGNKLSGHIPPCLASL 423
+ +S N+L+G IPP A+L
Sbjct: 177 TSMTISRNRLTGKIPPTFANL 197
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 77 LVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFP 116
L LD+ N +G LP+ L QL+ L +++++N L G P
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH---NYFLDILER 505
F +E E++ HRNL+++ C P + LV +M NGS+ L LD +R
Sbjct: 82 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 141
Query: 506 LNIMIDVGSALEYLRHGHSSAPIIH--------------------------CEGEDSVTQ 539
I + L YL H H IIH + +D
Sbjct: 142 QRIALGSARGLAYL-HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 200
Query: 540 TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTG---EMSLRRWV 596
TIG++APEY S G S K DV+ YGV+L+E T +R D ++ L WV
Sbjct: 201 XAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 597 KESLPH-RLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655
K L +L +VD +L + K + + ++ +AL C SP +R M++ L+
Sbjct: 261 KGLLKEKKLEALVDVDL-----QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 101/240 (42%), Gaps = 39/240 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH---NYFLDILER 505
F +E E++ HRNL+++ C P + LV +M NGS+ L LD +R
Sbjct: 74 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 133
Query: 506 LNIMIDVGSALEYLRHGHSSAPIIH--------------------------CEGEDSVTQ 539
I + L YL H H IIH + +D
Sbjct: 134 QRIALGSARGLAYL-HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 192
Query: 540 TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTG---EMSLRRWV 596
IG++APEY S G S K DV+ YGV+L+E T +R D ++ L WV
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 597 KESLPH-RLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655
K L +L +VD +L + K + + ++ +AL C SP +R M++ L+
Sbjct: 253 KGLLKEKKLEALVDVDL-----QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 41/228 (17%)
Query: 460 RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---YFLDILERLNIMIDVGSAL 516
RH +L+ +I C + L+ ++M NG+L++ LY + + +RL I I L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 517 EYLRHGHSSAPIIHCE--------GEDSVTQTTTMA-------------------TIGYM 549
YL H+ A IIH + E+ V + T T+GY+
Sbjct: 153 HYL---HTRA-IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 550 APEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEM-SLRRWVKESLPH-RLSEV 607
PEY +G ++ K DVYS+GV+L E + + EM +L W ES + +L ++
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 608 VDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655
VD NL A + + L D A+ C S + R M D KL+
Sbjct: 269 VDPNL-----ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 101/228 (44%), Gaps = 41/228 (17%)
Query: 460 RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---YFLDILERLNIMIDVGSAL 516
RH +L+ +I C + L+ ++M NG+L++ LY + + +RL I I L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 517 EYLRHGHSSAPIIHCE--------GEDSVTQTTTMA-------------------TIGYM 549
YL H+ A IIH + E+ V + T T+GY+
Sbjct: 153 HYL---HTRA-IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 550 APEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEM-SLRRWVKESLPH-RLSEV 607
PEY +G ++ K DVYS+GV+L E + + EM +L W ES + +L ++
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 608 VDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655
VD NL A + + L D A+ C S + R M D KL+
Sbjct: 269 VDPNL-----ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERL 506
F+ E E+L++++H N++K C + + L++EF+P GSL ++L H +D ++ L
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLL 120
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R+ H ++ + E +
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE +E S DV+S+GV+L E FT
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERL 506
F+ E E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 135
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R+ H ++ + E +
Sbjct: 136 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 195
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE +E S DV+S+GV+L E FT
Sbjct: 196 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERL 506
F+ E E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 62 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 121
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R+ H ++ + E +
Sbjct: 122 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 181
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE +E S DV+S+GV+L E FT
Sbjct: 182 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 42/199 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ N+ H N++K+ NP +V+EF+P G L L + + +L +
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE---------------------GEDSVTQTTTMATIG 547
M+D+ +EY++ + + PI+H + + S++Q + + G
Sbjct: 128 MLDIALGIEYMQ--NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSG 185
Query: 548 ------YMAPEY--GSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTG---------EM 590
+MAPE E + K D YS+ ++L T + P DE G E
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
Query: 591 SLRRWVKESLPHRLSEVVD 609
LR + E P RL V++
Sbjct: 246 GLRPTIPEDCPPRLRNVIE 264
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERL 506
F+ E E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 65 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 124
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R+ H ++ + E +
Sbjct: 125 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 184
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE +E S DV+S+GV+L E FT
Sbjct: 185 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERL 506
F+ E E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R+ H ++ + E +
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE +E S DV+S+GV+L E FT
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERL 506
F+ E E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R+ H ++ + E +
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE +E S DV+S+GV+L E FT
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERL 506
F+ E E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 56 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 115
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R+ H ++ + E +
Sbjct: 116 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 175
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE +E S DV+S+GV+L E FT
Sbjct: 176 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERL 506
F+ E E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 135
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R+ H ++ + E +
Sbjct: 136 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 195
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE +E S DV+S+GV+L E FT
Sbjct: 196 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERL 506
F+ E E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 57 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 116
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R+ H ++ + E +
Sbjct: 117 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 176
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE +E S DV+S+GV+L E FT
Sbjct: 177 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERL 506
F+ E E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 63 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 122
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R+ H ++ + E +
Sbjct: 123 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 182
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE +E S DV+S+GV+L E FT
Sbjct: 183 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERL 506
F+ E E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 120
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R+ H ++ + E +
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE +E S DV+S+GV+L E FT
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERL 506
F+ E E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 89 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 148
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R+ H ++ + E +
Sbjct: 149 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 208
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE +E S DV+S+GV+L E FT
Sbjct: 209 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERL 506
F+ E E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 64 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 123
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R+ H ++ + E +
Sbjct: 124 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 183
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE +E S DV+S+GV+L E FT
Sbjct: 184 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERL 506
F+ E E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 507 NIMIDVGSALEYL---RHGHSSAPI--IHCEGEDSV-------------------TQTTT 542
+ +EYL R+ H I E E+ V +
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPG 177
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE +E S DV+S+GV+L E FT
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERL 506
F+ E E+L++++H N++K C + + L++E++P GSL +L H +D ++ L
Sbjct: 59 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 118
Query: 507 NIMIDVGSALEYL---RHGHSSAPI--IHCEGEDSV-------------------TQTTT 542
+ +EYL R+ H + I E E+ V +
Sbjct: 119 QYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPG 178
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE +E S DV+S+GV+L E FT
Sbjct: 179 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFK--ALVLEFMPNGSLEKWLYSHNYFLDILERL 506
F+ E E+L++++H N++K C + + L++E++P GSL +L +H +D ++ L
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLL 120
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R+ H ++ + E +
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE +E S DV+S+GV+L E FT
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 42/199 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ N+ H N++K+ NP +V+EF+P G L L + + +L +
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE---------------------GEDSVTQTTTMATIG 547
M+D+ +EY+++ + PI+H + + ++Q + + G
Sbjct: 128 MLDIALGIEYMQN--QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSG 185
Query: 548 ------YMAPEY--GSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTG---------EM 590
+MAPE E + K D YS+ ++L T + P DE G E
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
Query: 591 SLRRWVKESLPHRLSEVVD 609
LR + E P RL V++
Sbjct: 246 GLRPTIPEDCPPRLRNVIE 264
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 42/199 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ N+ H N++K+ NP +V+EF+P G L L + + +L +
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRL 127
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE---------------------GEDSVTQTTTMATIG 547
M+D+ +EY+++ + PI+H + + +Q + + G
Sbjct: 128 MLDIALGIEYMQN--QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSG 185
Query: 548 ------YMAPEY--GSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTG---------EM 590
+MAPE E + K D YS+ ++L T + P DE G E
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
Query: 591 SLRRWVKESLPHRLSEVVD 609
LR + E P RL V++
Sbjct: 246 GLRPTIPEDCPPRLRNVIE 264
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 29/160 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYF--LDILERL 506
F E +++ +RH N++ + + + P ++V E++ GSL + L+ LD RL
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 507 NIMIDVGSALEYLRHGHSSAPIIH------------------CEGEDSVTQTTTM----- 543
++ DV + YL + + PI+H C+ S + +T
Sbjct: 141 SMAYDVAKGMNYLHN--RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS 198
Query: 544 --ATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
T +MAPE + + K DVYS+GV+L E T ++P
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 32/164 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEK----------------- 491
FD E +V+ +H NL++++ S+ D LV +MPNGSL
Sbjct: 77 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRC 136
Query: 492 -----------WLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQT 540
+L+ +++ ++ NI++D + G + A + +V +
Sbjct: 137 KIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ---TVMXS 193
Query: 541 TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE 584
+ T YMAPE G ++ K D+YS+GV+L+E T DE
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 28/162 (17%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNY--FLDILERL 506
F E L V H N++K+ +C NP LV+E+ GSL L+ + +
Sbjct: 49 FIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAM 106
Query: 507 NIMIDVGSALEYLRHGHSSAPIIH-------------------CEGEDSVTQTTTM---- 543
+ + + YL H +IH C+ + T M
Sbjct: 107 SWCLQCSQGVAYL-HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK 165
Query: 544 ATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 585
+ +MAPE S KCDV+S+G++L E TR++P DE+
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 207
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 28/162 (17%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNY--FLDILERL 506
F E L V H N++K+ +C NP LV+E+ GSL L+ + +
Sbjct: 48 FIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAM 105
Query: 507 NIMIDVGSALEYLRHGHSSAPIIH-------------------CEGEDSVTQTTTM---- 543
+ + + YL H +IH C+ + T M
Sbjct: 106 SWCLQCSQGVAYL-HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK 164
Query: 544 ATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 585
+ +MAPE S KCDV+S+G++L E TR++P DE+
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 97/220 (44%), Gaps = 36/220 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNP--DFKALVLEFMPNGSLEKWLYS-HNYFLDILER 505
F+ EC LR H N++ ++ +C +P L+ +MP GSL L+ N+ +D +
Sbjct: 54 FNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQA 113
Query: 506 LNIMIDVGSALEYLRHGHSSAPIIHCEG--------EDSVTQTTTMATI----------- 546
+ +D+ + +L H+ P+I ++ +T +MA +
Sbjct: 114 VKFALDMARGMAFL---HTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMY 170
Query: 547 --GYMAPE---YGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR---RWVKE 598
++APE E D++S+ VLL E TR+ P ++ E+ ++ ++
Sbjct: 171 APAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP 230
Query: 599 SLPHRLSEVVDTNL---VREEQAFSAKMDCLLSIMDLALD 635
++P +S V + + E+ A K D ++ I++ D
Sbjct: 231 TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 29/160 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYF--LDILERL 506
F E +++ +RH N++ + + + P ++V E++ GSL + L+ LD RL
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 507 NIMIDVGSALEYLRHGHSSAPIIH------------------CE-------GEDSVTQTT 541
++ DV + YL + + PI+H C+ +
Sbjct: 141 SMAYDVAKGMNYLH--NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKX 198
Query: 542 TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
T +MAPE + + K DVYS+GV+L E T ++P
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 32/164 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEK----------------- 491
FD E +V+ +H NL++++ S+ D LV +MPNGSL
Sbjct: 77 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRC 136
Query: 492 -----------WLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQT 540
+L+ +++ ++ NI++D + G + A + +V
Sbjct: 137 KIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ---TVMXX 193
Query: 541 TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE 584
+ T YMAPE G ++ K D+YS+GV+L+E T DE
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 32/164 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEK----------------- 491
FD E +V+ +H NL++++ S+ D LV +MPNGSL
Sbjct: 71 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRC 130
Query: 492 -----------WLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQT 540
+L+ +++ ++ NI++D + G + A + V
Sbjct: 131 KIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ---XVMXX 187
Query: 541 TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE 584
+ T YMAPE G ++ K D+YS+GV+L+E T DE
Sbjct: 188 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 230
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 58/240 (24%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDIL----- 503
F E E+L N++H +++K C + D +V E+M +G L K+L +H IL
Sbjct: 64 FQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP 123
Query: 504 ----------ERLNIMIDVGSALEYLRHGH------------SSAPIIHCEGEDSVTQTT 541
+ L+I + S + YL H A ++ G+ +++
Sbjct: 124 RQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDV 183
Query: 542 -----------TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGE 589
TM I +M PE + + DV+S+GV+L E FT K+P
Sbjct: 184 YSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP-------- 235
Query: 590 MSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649
W + S +EV++ + + + C + D+ L C P +R+++ +
Sbjct: 236 -----WFQLS----NTEVIEC--ITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKE 284
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 30/158 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E EV+ + H L+++ C LV EFM +G L +L + L +
Sbjct: 49 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM 108
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQ------------------TTT 542
+DV + YL A +IH + GE+ V + T T
Sbjct: 109 CLDVCEGMAYLEE----ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 164
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
+ + +PE S S+K DV+S+GVL+ E F+ +
Sbjct: 165 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 22/154 (14%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E EV+ + H L+++ C LV EFM +G L +L + L +
Sbjct: 69 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM 128
Query: 509 MIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQ------------------TTTMATI 546
+DV + YL H +C GE+ V + T T +
Sbjct: 129 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 188
Query: 547 GYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
+ +PE S S+K DV+S+GVL+ E F+ +
Sbjct: 189 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 222
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 22/154 (14%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E EV+ + H L+++ C LV EFM +G L +L + L +
Sbjct: 52 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM 111
Query: 509 MIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQ------------------TTTMATI 546
+DV + YL H +C GE+ V + T T +
Sbjct: 112 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 171
Query: 547 GYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
+ +PE S S+K DV+S+GVL+ E F+ +
Sbjct: 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 205
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E +L+ H N++++I C+ +V+E + G +L + L + L +
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQM 218
Query: 509 MIDVGSALEYLRHG---HSSAPIIHC-----------------EGEDSVTQTT---TMAT 545
+ D + +EYL H +C E D V +
Sbjct: 219 VGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVP 278
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ + APE + G S++ DV+S+G+LL ETF+
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 22/154 (14%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E EV+ + H L+++ C LV EFM +G L +L + L +
Sbjct: 49 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM 108
Query: 509 MIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQ------------------TTTMATI 546
+DV + YL H +C GE+ V + T T +
Sbjct: 109 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 168
Query: 547 GYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
+ +PE S S+K DV+S+GVL+ E F+ +
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 22/154 (14%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E EV+ + H L+++ C LV EFM +G L +L + L +
Sbjct: 47 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM 106
Query: 509 MIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQ------------------TTTMATI 546
+DV + YL H +C GE+ V + T T +
Sbjct: 107 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 166
Query: 547 GYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
+ +PE S S+K DV+S+GVL+ E F+ +
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 200
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 40/189 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH------------ 496
F+ E + H+N++ +I D LV+E++ +L +++ SH
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFT 117
Query: 497 NYFLD---------ILER----LNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTT-T 542
N LD I+ R NI+ID L+ G + A E S+TQT
Sbjct: 118 NQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL-----SETSLTQTNHV 172
Query: 543 MATIGYMAPEYGSEGIVSAKC-DVYSYGVLLMETFTRKRPTDEMFTGEMSLR---RWVKE 598
+ T+ Y +PE ++G + +C D+YS G++L E + P F GE ++ + +++
Sbjct: 173 LGTVQYFSPE-QAKGEATDECTDIYSIGIVLYEMLVGEPP----FNGETAVSIAIKHIQD 227
Query: 599 SLPHRLSEV 607
S+P+ ++V
Sbjct: 228 SVPNVTTDV 236
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E +L+ H N++++I C+ +V+E + G +L + L + L +
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQM 218
Query: 509 MIDVGSALEYLRHG---HSSAPIIHC-----------------EGEDSVTQTT---TMAT 545
+ D + +EYL H +C E D V +
Sbjct: 219 VGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVP 278
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ + APE + G S++ DV+S+G+LL ETF+
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 67/162 (41%), Gaps = 34/162 (20%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E ++ ++H N+I + C LV+EF G L + L DIL +N +
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAV 112
Query: 511 DVGSALEYLRHGHSSAPIIHCEGEDS-------------------VT---------QTTT 542
+ + YL H + PIIH + + S +T +TT
Sbjct: 113 QIARGMNYL-HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK 171
Query: 543 MATIG---YMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
M+ G +MAPE + S DV+SYGVLL E T + P
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 22/154 (14%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E EV+ + H L+++ C LV EFM +G L +L + L +
Sbjct: 50 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGM 109
Query: 509 MIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQ------------------TTTMATI 546
+DV + YL H +C GE+ V + T T +
Sbjct: 110 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 169
Query: 547 GYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
+ +PE S S+K DV+S+GVL+ E F+ +
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 203
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 90/234 (38%), Gaps = 44/234 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ H N+I++ + +V E+M NGSL+ +L H+ +++ + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 509 MIDVGSALEYLR---HGHSS---------------------APIIHCEGEDSVTQTTTMA 544
+ + S ++YL + H A ++ + E + T
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI 212
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + +PE + ++ DV+SYG++L E + +RP EM ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV------------- 259
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
V E MDC ++ L LDC + + R + L K+
Sbjct: 260 ------IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISS-CSNPDFKALVLEFMPNGSLEKWLYSHNYFL---DILE 504
F +E V+ +RH NL++++ +V E+M GSL +L S + D L
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL- 110
Query: 505 RLNIMIDVGSALEYLRHGH------SSAPIIHCEG------------EDSVTQTTTMATI 546
L +DV A+EYL + ++ ++ E E S TQ T +
Sbjct: 111 -LKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 169
Query: 547 GYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
+ APE E S K DV+S+G+LL E ++ R
Sbjct: 170 KWTAPEALREAAFSTKSDVWSFGILLWEIYSFGR 203
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 90/234 (38%), Gaps = 44/234 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ H N+I++ + +V E+M NGSL+ +L H+ +++ + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 509 MIDVGSALEYLR-----HGHSSA-------------------PIIHCEGEDSVTQTTTMA 544
+ + S ++YL H +A ++ + E + T
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI 212
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + +PE + ++ DV+SYG++L E + +RP EM ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV------------- 259
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
V E MDC ++ L LDC + + R + L K+
Sbjct: 260 ------IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 90/234 (38%), Gaps = 44/234 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ H N+I++ + +V E+M NGSL+ +L H+ +++ + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ + S ++YL H +A ++ + E + T
Sbjct: 153 LRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + +PE + ++ DV+SYG++L E + +RP EM ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV------------- 259
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
V E MDC ++ L LDC + + R + L K+
Sbjct: 260 ------IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 90/234 (38%), Gaps = 44/234 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ H N+I++ + +V E+M NGSL+ +L H+ +++ + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ + S ++YL H +A ++ + E + T
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + +PE + ++ DV+SYG++L E + +RP EM ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV------------- 259
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
V E MDC ++ L LDC + + R + L K+
Sbjct: 260 ------IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 90/234 (38%), Gaps = 44/234 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ H N+I++ + +V E+M NGSL+ +L H+ +++ + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ + S ++YL H +A ++ + E + T
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + +PE + ++ DV+SYG++L E + +RP EM ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV------------- 259
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
V E MDC ++ L LDC + + R + L K+
Sbjct: 260 ------IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 90/234 (38%), Gaps = 44/234 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ H N+I++ + +V E+M NGSL+ +L H+ +++ + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ + S ++YL H +A ++ + E + T
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + +PE + ++ DV+SYG++L E + +RP EM ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV------------- 259
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
V E MDC ++ L LDC + + R + L K+
Sbjct: 260 ------IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 90/234 (38%), Gaps = 44/234 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ H N+I++ + +V E+M NGSL+ +L H+ +++ + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ + S ++YL H +A ++ + E + T
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + +PE + ++ DV+SYG++L E + +RP EM ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV------------- 259
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
V E MDC ++ L LDC + + R + L K+
Sbjct: 260 ------IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 90/234 (38%), Gaps = 44/234 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ H N+I++ + +V E+M NGSL+ +L H+ +++ + +
Sbjct: 91 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 150
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ + S ++YL H +A ++ + E + T
Sbjct: 151 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 210
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + +PE + ++ DV+SYG++L E + +RP EM ++
Sbjct: 211 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV------------- 257
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
V E MDC ++ L LDC + + R + L K+
Sbjct: 258 ------IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 90/234 (38%), Gaps = 44/234 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ H N+I++ + +V E+M NGSL+ +L H+ +++ + +
Sbjct: 81 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 140
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ + S ++YL H +A ++ + E + T
Sbjct: 141 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 200
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + +PE + ++ DV+SYG++L E + +RP EM ++
Sbjct: 201 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV------------- 247
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
V E MDC ++ L LDC + + R + L K+
Sbjct: 248 ------IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISS-CSNPDFKALVLEFMPNGSLEKWLYSHNYFL---DILE 504
F +E V+ +RH NL++++ +V E+M GSL +L S + D L
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL- 104
Query: 505 RLNIMIDVGSALEYLRHGH------SSAPIIHCEG------------EDSVTQTTTMATI 546
L +DV A+EYL + ++ ++ E E S TQ T +
Sbjct: 105 -LKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 163
Query: 547 GYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
+ APE E S K DV+S+G+LL E ++ R
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 197
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 88/221 (39%), Gaps = 44/221 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F SE ++ H N+I++ + +V E+M NGSL+ +L +H+ I++ + +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM 156
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ VG+ + YL H +A ++ + + + T T
Sbjct: 157 LRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI 216
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + APE + S+ DV+S+GV++ E +RP M ++
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV------------- 263
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
+ V E A M C ++ L LDC + +R
Sbjct: 264 ------ISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQR 298
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 88/221 (39%), Gaps = 44/221 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F SE ++ H N+I++ + +V E+M NGSL+ +L +H+ I++ + +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM 156
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ VG+ + YL H +A ++ + + + T T
Sbjct: 157 LRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI 216
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + APE + S+ DV+S+GV++ E +RP M ++
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV------------- 263
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
+ V E A M C ++ L LDC + +R
Sbjct: 264 ------ISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQR 298
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISS-CSNPDFKALVLEFMPNGSLEKWLYSHNYFL---DILE 504
F +E V+ +RH NL++++ +V E+M GSL +L S + D L
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL- 119
Query: 505 RLNIMIDVGSALEYLRHGH------SSAPIIHCEG------------EDSVTQTTTMATI 546
L +DV A+EYL + ++ ++ E E S TQ T +
Sbjct: 120 -LKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 178
Query: 547 GYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
+ APE E S K DV+S+G+LL E ++ R
Sbjct: 179 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 212
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 90/234 (38%), Gaps = 44/234 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ H N+I++ + +V E+M NGSL+ +L H+ +++ + +
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM 123
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ + S ++YL H +A ++ + E + T
Sbjct: 124 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + +PE + ++ DV+SYG++L E + +RP EM ++
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV------------- 230
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
V E MDC ++ L LDC + + R + L K+
Sbjct: 231 ------IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 32/161 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDI 502
F E ++ + H+N+++ I + ++LE M G L+ +L S L +
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 503 LERLNIMIDVGSALEYLRHGH-------SSAPIIHCEGEDSVTQT--------------- 540
L+ L++ D+ +YL H + ++ C G V +
Sbjct: 155 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 541 ----TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
M + +M PE EGI ++K D +S+GVLL E F+
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 32/161 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDI 502
F E ++ + H+N+++ I + ++LE M G L+ +L S L +
Sbjct: 81 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 503 LERLNIMIDVGSALEYLRHGH-------SSAPIIHCEGEDSVTQT--------------- 540
L+ L++ D+ +YL H + ++ C G V +
Sbjct: 141 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 200
Query: 541 ----TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
M + +M PE EGI ++K D +S+GVLL E F+
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDI 502
F E ++ H+N+++ I + ++LE M G L+ +L S L +
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 503 LERLNIMIDVGSALEYLRHGH-------SSAPIIHCEGEDSVTQT--------------- 540
L+ L++ D+ +YL H + ++ C G V +
Sbjct: 132 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 191
Query: 541 ----TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
M + +M PE EGI ++K D +S+GVLL E F+
Sbjct: 192 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 66/153 (43%), Gaps = 26/153 (16%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKA--LVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
E E+LRN+ H N++K C+ L++EF+P+GSL+++L + +++ ++L
Sbjct: 60 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY 119
Query: 509 MIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTTMA 544
+ + ++YL ++ H I + E + +
Sbjct: 120 AVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDS 179
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ + APE + DV+S+GV L E T
Sbjct: 180 PVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 32/164 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEK----------------- 491
FD E +V +H NL++++ S+ D LV + PNGSL
Sbjct: 68 FDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRC 127
Query: 492 -----------WLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQT 540
+L+ +++ ++ NI++D + G + A + V +
Sbjct: 128 KIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ---XVXXS 184
Query: 541 TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE 584
+ T Y APE G ++ K D+YS+GV+L+E T DE
Sbjct: 185 RIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 227
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 66/153 (43%), Gaps = 26/153 (16%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKA--LVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
E E+LRN+ H N++K C+ L++EF+P+GSL+++L + +++ ++L
Sbjct: 72 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY 131
Query: 509 MIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTTMA 544
+ + ++YL ++ H I + E + +
Sbjct: 132 AVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDS 191
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ + APE + DV+S+GV L E T
Sbjct: 192 PVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDI 502
F E ++ H+N+++ I + ++LE M G L+ +L S L +
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 503 LERLNIMIDVGSALEYLRHGH-------SSAPIIHCEGEDSVTQT--------------- 540
L+ L++ D+ +YL H + ++ C G V +
Sbjct: 140 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199
Query: 541 ----TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
M + +M PE EGI ++K D +S+GVLL E F+
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISS-CSNPDFKALVLEFMPNGSLEKWLYSHNYFL---DILE 504
F +E V+ +RH NL++++ +V E+M GSL +L S + D L
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL- 291
Query: 505 RLNIMIDVGSALEYLRHGH------SSAPIIHCEG------------EDSVTQTTTMATI 546
L +DV A+EYL + ++ ++ E E S TQ T +
Sbjct: 292 -LKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 350
Query: 547 GYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
+ APE E S K DV+S+G+LL E ++ R
Sbjct: 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 384
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDI 502
F E ++ H+N+++ I + ++LE M G L+ +L S L +
Sbjct: 87 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 146
Query: 503 LERLNIMIDVGSALEYLRHGH-------SSAPIIHCEGEDSVTQT--------------- 540
L+ L++ D+ +YL H + ++ C G V +
Sbjct: 147 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 206
Query: 541 ----TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
M + +M PE EGI ++K D +S+GVLL E F+
Sbjct: 207 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDI 502
F E ++ H+N+++ I + ++LE M G L+ +L S L +
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 503 LERLNIMIDVGSALEYLRHGH-------SSAPIIHCEGEDSVTQT--------------- 540
L+ L++ D+ +YL H + ++ C G V +
Sbjct: 141 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYY 200
Query: 541 ----TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
M + +M PE EGI ++K D +S+GVLL E F+
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDI 502
F E ++ H+N+++ I + ++LE M G L+ +L S L +
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 156
Query: 503 LERLNIMIDVGSALEYLRHGH-------SSAPIIHCEGEDSVTQT--------------- 540
L+ L++ D+ +YL H + ++ C G V +
Sbjct: 157 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 216
Query: 541 ----TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
M + +M PE EGI ++K D +S+GVLL E F+
Sbjct: 217 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDI 502
F E ++ H+N+++ I + ++LE M G L+ +L S L +
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 157
Query: 503 LERLNIMIDVGSALEYLRHGH-------SSAPIIHCEGEDSVTQT--------------- 540
L+ L++ D+ +YL H + ++ C G V +
Sbjct: 158 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 217
Query: 541 ----TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
M + +M PE EGI ++K D +S+GVLL E F+
Sbjct: 218 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDI 502
F E ++ H+N+++ I + ++LE M G L+ +L S L +
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 503 LERLNIMIDVGSALEYLRHGH-------SSAPIIHCEGEDSVTQT--------------- 540
L+ L++ D+ +YL H + ++ C G V +
Sbjct: 141 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 200
Query: 541 ----TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
M + +M PE EGI ++K D +S+GVLL E F+
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDI 502
F E ++ H+N+++ I + ++LE M G L+ +L S L +
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 180
Query: 503 LERLNIMIDVGSALEYLRHGH-------SSAPIIHCEGEDSVTQT--------------- 540
L+ L++ D+ +YL H + ++ C G V +
Sbjct: 181 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 240
Query: 541 ----TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
M + +M PE EGI ++K D +S+GVLL E F+
Sbjct: 241 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDI 502
F E ++ H+N+++ I + ++LE M G L+ +L S L +
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 166
Query: 503 LERLNIMIDVGSALEYLRHGH-------SSAPIIHCEGEDSVTQT--------------- 540
L+ L++ D+ +YL H + ++ C G V +
Sbjct: 167 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 226
Query: 541 ----TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
M + +M PE EGI ++K D +S+GVLL E F+
Sbjct: 227 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDI 502
F E ++ H+N+++ I + ++LE M G L+ +L S L +
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 503 LERLNIMIDVGSALEYLRHGH-------SSAPIIHCEGEDSVTQT--------------- 540
L+ L++ D+ +YL H + ++ C G V +
Sbjct: 155 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 541 ----TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
M + +M PE EGI ++K D +S+GVLL E F+
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 89/234 (38%), Gaps = 44/234 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ H N+I++ + +V E M NGSL+ +L H+ +++ + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ + S ++YL H +A ++ + E + T
Sbjct: 153 LRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + +PE + ++ DV+SYG++L E + +RP EM ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV------------- 259
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
V E MDC ++ L LDC + + R + L K+
Sbjct: 260 ------IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 92/234 (39%), Gaps = 44/234 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ H N+I++ S ++ E+M NG+L+K+L + +L+ + +
Sbjct: 93 FLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGM 152
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ + + ++YL H +A ++ + E + T +
Sbjct: 153 LRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 212
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + APE S ++ DV+S+G+++ E T +RP E+ H
Sbjct: 213 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--------------HE 258
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
+ + ++ MDC +I L + C + +R D + L K+
Sbjct: 259 VMKAINDGF-----RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 25/153 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCS-NPDFKALVLEFMPNGSLEKWLYSHNY-FLDILERL 506
F E V++ ++H NL++++ C+ P F +V E+MP G+L +L N + + L
Sbjct: 75 FLKEAAVMKEIKHPNLVQLLGVCTLEPPF-YIVTEYMPYGNLLDYLRECNREEVTAVVLL 133
Query: 507 NIMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------ 544
+ + SA+EYL H +C GE+ V +
Sbjct: 134 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKF 193
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 194 PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 89/234 (38%), Gaps = 44/234 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ H N+I++ + +V E M NGSL+ +L H+ +++ + +
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM 152
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ + S ++YL H +A ++ + E + T
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + +PE + ++ DV+SYG++L E + +RP EM ++
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV------------- 259
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
V E MDC ++ L LDC + + R + L K+
Sbjct: 260 ------IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDI 502
F E ++ H+N+++ I + +++E M G L+ +L S L +
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 503 LERLNIMIDVGSALEYLRHGH-------SSAPIIHCEGEDSVTQT--------------- 540
L+ L++ D+ +YL H + ++ C G V +
Sbjct: 140 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199
Query: 541 ----TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
M + +M PE EGI ++K D +S+GVLL E F+
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLY------SHNYFLDI 502
F E ++ H+N+++ I + +++E M G L+ +L S L +
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 503 LERLNIMIDVGSALEYLRHGH-------SSAPIIHCEGEDSVTQT--------------- 540
L+ L++ D+ +YL H + ++ C G V +
Sbjct: 155 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 541 ----TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
M + +M PE EGI ++K D +S+GVLL E F+
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 32/215 (14%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E +V+ N+ H L+++ C+ ++ E+M NG L +L + + L +
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 125
Query: 509 MIDVGSALEYLRHG---HSSAPIIHCEGEDS-------------VTQTTTMATIG----- 547
DV A+EYL H +C D V +++G
Sbjct: 126 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPV 185
Query: 548 -YMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMS---LRRWVKESLPHR 603
+ PE S+K D++++GVL+ E ++ + E FT + + + ++ PH
Sbjct: 186 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL 245
Query: 604 LSEVVDTNL-------VREEQAFSAKMDCLLSIMD 631
SE V T + E F + +L +MD
Sbjct: 246 ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 28/156 (17%)
Query: 449 FDSECEVLRNVRHRNLIK---IISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILER 505
F E ++L+ + ++K + P+ + LV+E++P+G L +L H LD
Sbjct: 55 FQREIQILKALHSDFIVKYRGVSYGPGRPELR-LVMEYLPSGCLRDFLQRHRARLDASRL 113
Query: 506 LNIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTT 541
L + +EYL R H A ++ + + V +
Sbjct: 114 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREP 173
Query: 542 TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE S+ I S + DV+S+GV+L E FT
Sbjct: 174 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 89/234 (38%), Gaps = 44/234 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ H N+I++ + +V E M NGSL+ +L H+ +++ + +
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM 123
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ + S ++YL H +A ++ + E + T
Sbjct: 124 LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + +PE + ++ DV+SYG++L E + +RP EM ++
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV------------- 230
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
V E MDC ++ L LDC + + R + L K+
Sbjct: 231 ------IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 32/215 (14%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E +V+ N+ H L+++ C+ ++ E+M NG L +L + + L +
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 125
Query: 509 MIDVGSALEYLRHG---HSSAPIIHCEGEDS-------------VTQTTTMATIG----- 547
DV A+EYL H +C D V +++G
Sbjct: 126 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV 185
Query: 548 -YMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMS---LRRWVKESLPHR 603
+ PE S+K D++++GVL+ E ++ + E FT + + + ++ PH
Sbjct: 186 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL 245
Query: 604 LSEVVDTNL-------VREEQAFSAKMDCLLSIMD 631
SE V T + E F + +L +MD
Sbjct: 246 ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKAL--VLEFMPNGSLEKWLYSHNYFLDILERL 506
F E ++L+ + ++K P ++L V+E++P+G L +L H LD L
Sbjct: 58 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL 117
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R H A ++ + + V +
Sbjct: 118 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 177
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE S+ I S + DV+S+GV+L E FT
Sbjct: 178 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKAL--VLEFMPNGSLEKWLYSHNYFLDILERL 506
F E ++L+ + ++K P ++L V+E++P+G L +L H LD L
Sbjct: 71 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL 130
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R H A ++ + + V +
Sbjct: 131 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 190
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE S+ I S + DV+S+GV+L E FT
Sbjct: 191 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 32/215 (14%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E +V+ N+ H L+++ C+ ++ E+M NG L +L + + L +
Sbjct: 51 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 110
Query: 509 MIDVGSALEYLRHG---HSSAPIIHCEGEDS-------------VTQTTTMATIG----- 547
DV A+EYL H +C D V +++G
Sbjct: 111 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV 170
Query: 548 -YMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMS---LRRWVKESLPHR 603
+ PE S+K D++++GVL+ E ++ + E FT + + + ++ PH
Sbjct: 171 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL 230
Query: 604 LSEVVDTNL-------VREEQAFSAKMDCLLSIMD 631
SE V T + E F + +L +MD
Sbjct: 231 ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKAL--VLEFMPNGSLEKWLYSHNYFLDILERL 506
F E ++L+ + ++K P ++L V+E++P+G L +L H LD L
Sbjct: 59 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL 118
Query: 507 NIMIDVGSALEYL---RHGHSS---------------------APIIHCEGEDSVTQTTT 542
+ +EYL R H A ++ + + V +
Sbjct: 119 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 178
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ I + APE S+ I S + DV+S+GV+L E FT
Sbjct: 179 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 32/215 (14%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E +V+ N+ H L+++ C+ ++ E+M NG L +L + + L +
Sbjct: 57 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 116
Query: 509 MIDVGSALEYLRHG---HSSAPIIHCEGEDS-------------VTQTTTMATIG----- 547
DV A+EYL H +C D V +++G
Sbjct: 117 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV 176
Query: 548 -YMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMS---LRRWVKESLPHR 603
+ PE S+K D++++GVL+ E ++ + E FT + + + ++ PH
Sbjct: 177 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL 236
Query: 604 LSEVVDTNL-------VREEQAFSAKMDCLLSIMD 631
SE V T + E F + +L +MD
Sbjct: 237 ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 271
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 38/221 (17%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNP--DFKALVLEFMPNGSLEKWLYS-HNYFLDILER 505
F+ EC LR H N++ ++ +C +P L+ + P GSL L+ N+ +D +
Sbjct: 54 FNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQA 113
Query: 506 LNIMIDVGSALEYLRHGHSSAPII--HCEGEDSV------TQTTTMATI----------- 546
+ +D +L H+ P+I H SV T + A +
Sbjct: 114 VKFALDXARGXAFL---HTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXY 170
Query: 547 --GYMAPE---YGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR---RWVKE 598
++APE E D +S+ VLL E TR+ P ++ E+ + ++
Sbjct: 171 APAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRP 230
Query: 599 SLPHRLSEVVDTNLVR----EEQAFSAKMDCLLSIMDLALD 635
++P +S V + L + E+ A K D ++ I++ D
Sbjct: 231 TIPPGISPHV-SKLXKICXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 32/215 (14%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E +V+ N+ H L+++ C+ ++ E+M NG L +L + + L +
Sbjct: 46 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 105
Query: 509 MIDVGSALEYLRHG---HSSAPIIHCEGEDS-------------VTQTTTMATIG----- 547
DV A+EYL H +C D V +++G
Sbjct: 106 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV 165
Query: 548 -YMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMS---LRRWVKESLPHR 603
+ PE S+K D++++GVL+ E ++ + E FT + + + ++ PH
Sbjct: 166 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL 225
Query: 604 LSEVVDTNL-------VREEQAFSAKMDCLLSIMD 631
SE V T + E F + +L +MD
Sbjct: 226 ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 260
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 32/215 (14%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E +V+ N+ H L+++ C+ ++ E+M NG L +L + + L +
Sbjct: 50 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 109
Query: 509 MIDVGSALEYLRHG---HSSAPIIHCEGEDS-------------VTQTTTMATIG----- 547
DV A+EYL H +C D V +++G
Sbjct: 110 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV 169
Query: 548 -YMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMS---LRRWVKESLPHR 603
+ PE S+K D++++GVL+ E ++ + E FT + + + ++ PH
Sbjct: 170 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL 229
Query: 604 LSEVVDTNL-------VREEQAFSAKMDCLLSIMD 631
SE V T + E F + +L +MD
Sbjct: 230 ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 264
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 85/215 (39%), Gaps = 32/215 (14%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E +V+ N+ H L+++ C+ ++ E+M NG L +L + + L +
Sbjct: 51 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 110
Query: 509 MIDVGSALEYLRHG---HSSAPIIHCEGEDS-VTQTTTMATIGYM--------------- 549
DV A+EYL H +C D V + + Y+
Sbjct: 111 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV 170
Query: 550 ---APEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMS---LRRWVKESLPHR 603
PE S+K D++++GVL+ E ++ + E FT + + + ++ PH
Sbjct: 171 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL 230
Query: 604 LSEVVDTNL-------VREEQAFSAKMDCLLSIMD 631
SE V T + E F + +L +MD
Sbjct: 231 ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 35/183 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E + + + H L+K CS +V E++ NG L +L SH L+ + L +
Sbjct: 50 FFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEM 109
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE--------------------------GEDSVTQTTT 542
DV + +L S IH + + V+ T
Sbjct: 110 CYDVCEGMAFLE----SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGT 165
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLP 601
+ + APE S+K DV+++G+L+ E F+ K P D E+ L K S
Sbjct: 166 KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL----KVSQG 221
Query: 602 HRL 604
HRL
Sbjct: 222 HRL 224
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ +++EFM G+L +L N ++ + L
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY 116
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-------------------EGEDSVTQTTTMAT 545
+ + SA+EYL H +C G+
Sbjct: 117 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 176
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 91/236 (38%), Gaps = 46/236 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F SE ++ H N+I + + ++ EFM NGSL+ +L ++ +++ + +
Sbjct: 81 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM 140
Query: 509 MIDVGSALEYLR-----HGHSSAPIIHCEG---------------EDSVTQTTTMATIG- 547
+ + + ++YL H +A I ED + T + +G
Sbjct: 141 LRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGG 200
Query: 548 -----YMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLP 601
+ APE ++ DV+SYG+++ E + +RP +M ++
Sbjct: 201 KIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV----------- 249
Query: 602 HRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
N + ++ MDC ++ L LDC + + R L K+
Sbjct: 250 --------INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 91/236 (38%), Gaps = 46/236 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F SE ++ H N+I + + ++ EFM NGSL+ +L ++ +++ + +
Sbjct: 55 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM 114
Query: 509 MIDVGSALEYLR-----HGHSSAPIIHCEG---------------EDSVTQTTTMATIG- 547
+ + + ++YL H +A I ED + T + +G
Sbjct: 115 LRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGG 174
Query: 548 -----YMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLP 601
+ APE ++ DV+SYG+++ E + +RP +M ++
Sbjct: 175 KIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV----------- 223
Query: 602 HRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
N + ++ MDC ++ L LDC + + R L K+
Sbjct: 224 --------INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ +++EFM G+L +L N ++ + L
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 87/234 (37%), Gaps = 44/234 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ H N++ + + +V+EFM NG+L+ +L H+ +++ + +
Sbjct: 91 FLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGM 150
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ + + + YL H +A +I + E T T
Sbjct: 151 LRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI 210
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
+ + APE ++ DV+SYG+++ E + +RP +M ++
Sbjct: 211 PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV------------- 257
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
+ E A MDC + L LDC + +R L K+
Sbjct: 258 ------IKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLN 507
F E +V++ +RH L+++ + S +V+E+M GSL +L +L + + ++
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEXTARQGAKF 177
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 221
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 222 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ +++EFM G+L +L N + + L
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY 113
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-------------------EGEDSVTQTTTMAT 545
+ + SA+EYL H +C G+
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLN 507
F E +V++ +RH L+++ + S +V+E+M GSL +L +L + + ++
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 221
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 222 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N ++ + L
Sbjct: 302 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 361
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-------------------EGEDSVTQTTTMAT 545
+ + SA+EYL H + +C G+
Sbjct: 362 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 421
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 422 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N ++ + L
Sbjct: 260 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 319
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-------------------EGEDSVTQTTTMAT 545
+ + SA+EYL H + +C G+
Sbjct: 320 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 379
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 380 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N ++ + L
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-------------------EGEDSVTQTTTMAT 545
+ + SA+EYL H +C G+
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 180
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 87/221 (39%), Gaps = 44/221 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F SE ++ H N+I + + ++ E+M NGSL+ +L ++ +++ + +
Sbjct: 77 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 136
Query: 509 MIDVGSALEYLR-----HGHSSA-------------------PIIHCEGEDSVTQTTTMA 544
+ +GS ++YL H +A ++ + E + T
Sbjct: 137 LRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 196
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + APE + ++ DV+SYG+++ E + +RP +M ++
Sbjct: 197 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV------------- 243
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
+ E MDC +++ L LDC + R
Sbjct: 244 ------IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDR 278
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 87/221 (39%), Gaps = 44/221 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F SE ++ H N+I + + ++ E+M NGSL+ +L ++ +++ + +
Sbjct: 62 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 121
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ +GS ++YL H +A ++ + E + T
Sbjct: 122 LRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 181
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + APE + ++ DV+SYG+++ E + +RP +M ++
Sbjct: 182 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV------------- 228
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
+ E MDC +++ L LDC + R
Sbjct: 229 ------IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDR 263
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ +++EFM G+L +L N + + L
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY 115
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 87/221 (39%), Gaps = 44/221 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F SE ++ H N+I + + ++ E+M NGSL+ +L ++ +++ + +
Sbjct: 56 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 115
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ +GS ++YL H +A ++ + E + T
Sbjct: 116 LRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 175
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + APE + ++ DV+SYG+++ E + +RP +M ++
Sbjct: 176 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV------------- 222
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
+ E MDC +++ L LDC + R
Sbjct: 223 ------IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDR 257
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLN 507
F E +V++ +RH L+++ + S +V E+M GSL +L +L + + ++
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H +A I GE+ V +
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLAAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 221
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 222 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ +++EFM G+L +L N + + L
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY 115
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLN 507
F E +V++ +RH L+++ + S +V E+M GSL +L +L + + ++
Sbjct: 60 FLQEAQVMKKIRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 221
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 222 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E +V++ +RH L+++ + S +V E+M GSL +L +L + + ++
Sbjct: 309 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 367
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 368 MAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKF 426
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 470
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 471 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKEPEER 508
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N ++ + L
Sbjct: 60 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 119
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 120 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 92/247 (37%), Gaps = 57/247 (23%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDIL----- 503
F E E+L ++H+++++ C+ +V E+M +G L ++L SH +L
Sbjct: 90 FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 149
Query: 504 ---------ERLNIMIDVGSALEY---LRHGHSSAPIIHC-EGEDSVTQT---------- 540
+ L + V + + Y L H +C G+ V +
Sbjct: 150 VAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 209
Query: 541 ---------TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEM 590
TM I +M PE + + DV+S+GV+L E FT K+P
Sbjct: 210 STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP--------- 260
Query: 591 SLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650
W ++LS + + + + C + + C P +R + D
Sbjct: 261 ----W------YQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 310
Query: 651 AAKLKKI 657
A+L+ +
Sbjct: 311 HARLQAL 317
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N ++ + L
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E +V++ +RH L+++ + S +V E+M GSL +L +L + + ++
Sbjct: 50 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 108
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 109 MAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEXTARQGAKF 167
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 168 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 211
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 212 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKEPEER 249
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N ++ + L
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N ++ + L
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 115
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N ++ + L
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 116
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 117 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 176
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N ++ + L
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 115
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N + + L
Sbjct: 263 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 322
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-------------------EGEDSVTQTTTMAT 545
+ + SA+EYL H + +C G+
Sbjct: 323 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 382
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 383 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLN 507
F E +V++ +RH L+++ + S +V E+M GSL +L +L + + ++
Sbjct: 227 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 285
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 286 MAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLGRLIEDNEYTARQGAKF 344
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 345 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 388
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 389 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKDPEER 426
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 93/236 (39%), Gaps = 46/236 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F SE ++ H N+I++ +N ++ EFM NG+L+ +L ++ +++ + +
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM 123
Query: 509 MIDVGSALEYLR-----HGHSSAPIIHC------------------EGEDSVTQTTTMA- 544
+ + S + YL H +A I E T+T+++
Sbjct: 124 LRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGG 183
Query: 545 --TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLP 601
I + APE + ++ D +SYG+++ E + +RP +M ++
Sbjct: 184 KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV----------- 232
Query: 602 HRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
N + ++ DC S+ L LDC + + R + L K+
Sbjct: 233 --------INAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N ++ + L
Sbjct: 69 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 128
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 129 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 188
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 189 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N ++ + L
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 117
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 177
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 47/170 (27%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL---------YSHNYFL 500
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L YS+N
Sbjct: 123 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 182
Query: 501 DILERLN------IMIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQ------- 539
+ E+L+ V +EYL +S IH + ED+V +
Sbjct: 183 NPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 238
Query: 540 ------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
T + +MAPE + I + + DV+S+GVLL E FT
Sbjct: 239 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N + + L
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 113
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-------------------EGEDSVTQTTTMAT 545
+ + SA+EYL H +C G+
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N ++ + L
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 117
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 47/170 (27%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL---------YSHNYFL 500
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L YS+N
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 141
Query: 501 DILERLN------IMIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQ------- 539
+ E+L+ V +EYL +S IH + ED+V +
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 540 ------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
T + +MAPE + I + + DV+S+GVLL E FT
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E +V++ +RH L+++ + S +V E+M GSL +L +L + + ++
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKF 343
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 387
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 388 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKEPEER 425
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E +V++ +RH L+++ + S +V E+M GSL +L +L + + ++
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKF 343
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 387
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 388 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKEPEER 425
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 47/170 (27%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL---------YSHNYFL 500
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L YS+N
Sbjct: 71 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 130
Query: 501 DILERLN------IMIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQ------- 539
+ E+L+ V +EYL +S IH + ED+V +
Sbjct: 131 NPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 186
Query: 540 ------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
T + +MAPE + I + + DV+S+GVLL E FT
Sbjct: 187 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 47/170 (27%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL---------YSHNYFL 500
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L YS+N
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSH 141
Query: 501 DILERLN------IMIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQ------- 539
+ E+L+ V +EYL +S IH + ED+V +
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 540 ------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
T + +MAPE + I + + DV+S+GVLL E FT
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N ++ + L
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 117
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 47/170 (27%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL---------YSHNYFL 500
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L YS+N
Sbjct: 75 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 134
Query: 501 DILERLN------IMIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQ------- 539
+ E+L+ V +EYL +S IH + ED+V +
Sbjct: 135 NPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 190
Query: 540 ------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
T + +MAPE + I + + DV+S+GVLL E FT
Sbjct: 191 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 47/170 (27%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL---------YSHNYFL 500
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L YS+N
Sbjct: 74 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 133
Query: 501 DILERLN------IMIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQ------- 539
+ E+L+ V +EYL +S IH + ED+V +
Sbjct: 134 NPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 189
Query: 540 ------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
T + +MAPE + I + + DV+S+GVLL E FT
Sbjct: 190 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 92/247 (37%), Gaps = 57/247 (23%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDIL----- 503
F E E+L ++H+++++ C+ +V E+M +G L ++L SH +L
Sbjct: 61 FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 120
Query: 504 ---------ERLNIMIDVGSALEY---LRHGHSSAPIIHC-EGEDSVTQT---------- 540
+ L + V + + Y L H +C G+ V +
Sbjct: 121 VAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 180
Query: 541 ---------TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEM 590
TM I +M PE + + DV+S+GV+L E FT K+P
Sbjct: 181 STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP--------- 231
Query: 591 SLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650
W ++LS + + + + C + + C P +R + D
Sbjct: 232 ----W------YQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 281
Query: 651 AAKLKKI 657
A+L+ +
Sbjct: 282 HARLQAL 288
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLN 507
F E +V++ +RH L+++ + S +V E+M GSL +L +L + + ++
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 221
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 222 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLN 507
F E +V++ +RH L+++ + S +V E+M GSL +L +L + + ++
Sbjct: 49 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 107
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 108 MAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKF 166
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 167 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 210
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 211 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKDPEER 248
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 90/234 (38%), Gaps = 44/234 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ H N+I + + +V E+M NGSL+ +L ++ +++ + +
Sbjct: 70 FLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGM 129
Query: 509 MIDVGSALEYLR-----HGHSSAP-------------------IIHCEGEDSVTQTTTMA 544
+ + + ++YL H +A ++ + E + T
Sbjct: 130 LRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 189
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHR 603
I + APE + ++ DV+SYG+++ E + +RP EM ++
Sbjct: 190 PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDV------------- 236
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
V E + MDC ++ L LDC + + R + L K+
Sbjct: 237 ------IKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E +V++ +RH L+++ + S +V E+M GSL +L +L + + ++
Sbjct: 53 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 111
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 112 MAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKF 170
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 171 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 214
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 215 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKEPEER 252
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 507 NIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTT-MATIGYMAPEYGSEGIVSAKCDV 565
NIMI +A++ + G + A + +SVTQT + T Y++PE V A+ DV
Sbjct: 146 NIMISATNAVKVMDFGIARA---IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 566 YSYGVLLMETFTRKRPTDEMFTGE 589
YS G +L E T + P FTG+
Sbjct: 203 YSLGCVLYEVLTGEPP----FTGD 222
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 507 NIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTT-MATIGYMAPEYGSEGIVSAKCDV 565
NIMI +A++ + G + A + +SVTQT + T Y++PE V A+ DV
Sbjct: 146 NIMISATNAVKVMDFGIARA---IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 566 YSYGVLLMETFTRKRPTDEMFTGE 589
YS G +L E T + P FTG+
Sbjct: 203 YSLGCVLYEVLTGEPP----FTGD 222
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 92/247 (37%), Gaps = 57/247 (23%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDIL----- 503
F E E+L ++H+++++ C+ +V E+M +G L ++L SH +L
Sbjct: 67 FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 126
Query: 504 ---------ERLNIMIDVGSALEY---LRHGHSSAPIIHC-EGEDSVTQT---------- 540
+ L + V + + Y L H +C G+ V +
Sbjct: 127 VAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 186
Query: 541 ---------TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEM 590
TM I +M PE + + DV+S+GV+L E FT K+P
Sbjct: 187 STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP--------- 237
Query: 591 SLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650
W ++LS + + + + C + + C P +R + D
Sbjct: 238 ----W------YQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 287
Query: 651 AAKLKKI 657
A+L+ +
Sbjct: 288 HARLQAL 294
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N + + L
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 120
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 507 NIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTT-MATIGYMAPEYGSEGIVSAKCDV 565
NIMI +A++ + G + A + +SVTQT + T Y++PE V A+ DV
Sbjct: 146 NIMISATNAVKVMDFGIARA---IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 566 YSYGVLLMETFTRKRPTDEMFTGE 589
YS G +L E T + P FTG+
Sbjct: 203 YSLGCVLYEVLTGEPP----FTGD 222
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLN 507
F E +V++ +RH L+++ + S +V E+M GSL +L +L + + ++
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 221
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 222 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 507 NIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTT-MATIGYMAPEYGSEGIVSAKCDV 565
NIMI +A++ + G + A + +SVTQT + T Y++PE V A+ DV
Sbjct: 146 NIMISATNAVKVMDFGIARA---IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 566 YSYGVLLMETFTRKRPTDEMFTGE 589
YS G +L E T + P FTG+
Sbjct: 203 YSLGCVLYEVLTGEPP----FTGD 222
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N + + L
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 113
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFP 173
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N + + L
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 115
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 507 NIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTT-MATIGYMAPEYGSEGIVSAKCDV 565
NIMI +A++ + G + A + +SVTQT + T Y++PE V A+ DV
Sbjct: 163 NIMISATNAVKVMDFGIARA---IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 219
Query: 566 YSYGVLLMETFTRKRPTDEMFTGE 589
YS G +L E T + P FTG+
Sbjct: 220 YSLGCVLYEVLTGEPP----FTGD 239
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLN 507
F E +V++ +RH L+++ + S +V E+M GSL +L +L + + ++
Sbjct: 51 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 109
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 110 MAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKF 168
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 169 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 212
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 213 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKDPEER 250
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E V++ ++H NL++++ C+ ++ EFM G+L +L N + + L
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 115
Query: 508 IMIDVGSALEYLRHG---HSSAPIIHC-EGEDSVTQTTTMA------------------T 545
+ + SA+EYL H +C GE+ + +
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + S K DV+++GVLL E T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 96/256 (37%), Gaps = 64/256 (25%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL----------------- 493
SE VL+ V H ++IK+ +CS L++E+ GSL +L
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 494 ------YSHNYFLDILERLNIMIDVGSALEYLRHGH------SSAPIIHCEG-------- 533
+ L + + ++ + ++YL ++ I+ EG
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 534 --------EDS-VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE 584
EDS V ++ + +MA E + I + + DV+S+GVLL E T
Sbjct: 195 GLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL---GGN 251
Query: 585 MFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
+ G P RL NL++ +C + L L C + PDKR
Sbjct: 252 PYPG----------IPPERL-----FNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
Query: 645 MHMTDAAAKLKKIKVK 660
D + L+K+ VK
Sbjct: 297 PVFADISKDLEKMMVK 312
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 96/256 (37%), Gaps = 64/256 (25%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL----------------- 493
SE VL+ V H ++IK+ +CS L++E+ GSL +L
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 494 ------YSHNYFLDILERLNIMIDVGSALEYLRHGH------SSAPIIHCEG-------- 533
+ L + + ++ + ++YL ++ I+ EG
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 534 --------EDS-VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE 584
EDS V ++ + +MA E + I + + DV+S+GVLL E T
Sbjct: 195 GLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL---GGN 251
Query: 585 MFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
+ G P RL NL++ +C + L L C + PDKR
Sbjct: 252 PYPG----------IPPERL-----FNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
Query: 645 MHMTDAAAKLKKIKVK 660
D + L+K+ VK
Sbjct: 297 PVFADISKDLEKMMVK 312
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 96/256 (37%), Gaps = 64/256 (25%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL----------------- 493
SE VL+ V H ++IK+ +CS L++E+ GSL +L
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 494 ------YSHNYFLDILERLNIMIDVGSALEYL------RHGHSSAPIIHCEG-------- 533
+ L + + ++ + ++YL ++ I+ EG
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDF 194
Query: 534 --------EDS-VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE 584
EDS V ++ + +MA E + I + + DV+S+GVLL E T
Sbjct: 195 GLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL---GGN 251
Query: 585 MFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
+ G P RL NL++ +C + L L C + PDKR
Sbjct: 252 PYPG----------IPPERL-----FNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
Query: 645 MHMTDAAAKLKKIKVK 660
D + L+K+ VK
Sbjct: 297 PVFADISKDLEKMMVK 312
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E +V++ +RH L+++ + S +V E+M GSL +L +L + + ++
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVD 115
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 116 MSAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEWTARQGAKF 174
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 175 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 218
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 219 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKEPEER 256
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLN 507
F E +V++ +RH L+++ + S +V+E+M G L +L +L + + ++
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVD 118
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 221
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 222 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E +V++ +RH L+++ + S +V E+M GSL +L +L + + ++
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKF 343
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 387
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 388 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKEPEER 425
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLN 507
F E +V++ +RH L+++ + S +V E+M GSL +L +L + + ++
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVD 115
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 116 MSAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKF 174
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 175 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 218
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 219 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKEPEER 256
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 94/236 (39%), Gaps = 46/236 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F SE ++ H N+I++ +N ++ EFM NG+L+ +L ++ +++ + +
Sbjct: 62 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM 121
Query: 509 MIDVGSALEYLR-----HGHSSAPIIHCEG---------------EDSVTQTTTMATIG- 547
+ + S + YL H +A I E++ + T +++G
Sbjct: 122 LRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGG 181
Query: 548 -----YMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLP 601
+ APE + ++ D +SYG+++ E + +RP +M ++
Sbjct: 182 KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV----------- 230
Query: 602 HRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
N + ++ DC S+ L LDC + + R + L K+
Sbjct: 231 --------INAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
Query: 71 FGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRL 130
F L L L + N P+ L +L +SL YN+L L+ L+ LRL
Sbjct: 105 FDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRL 164
Query: 131 DYNNFTGPIPNSLFN-LSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGL----WSCNLQG 185
YNN +P F+ L+ L+ L+ + N + +L KL L L W C G
Sbjct: 165 -YNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNG 223
Query: 186 QI 187
I
Sbjct: 224 II 225
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 9/180 (5%)
Query: 79 SLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDY--NNFT 136
LD+ N K +L +LR++ L NKL + P+ G+ +L+ L + +N
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPA--GIFKELKNLETLWVTDNKL 97
Query: 137 GPIPNSLFN-LSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSXX 195
+P +F+ L L LR + N + P +L KL L L LQ +P +
Sbjct: 98 QALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKL 156
Query: 196 XXXXXXXXXXXXSGLIPPTIFN-ISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTN 254
+P F+ ++ ++ L L++NQL R+P SL ++ L L N
Sbjct: 157 TSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQEN 215
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 211 IPPTIFN-ISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATK 269
+P F+ ++ +R+L L N+L LP+ I L+N+E L ++ N L
Sbjct: 52 LPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVN 110
Query: 270 LIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTT 306
L L L N P F +L L+ L++ N L +
Sbjct: 111 LAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS 147
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
Query: 211 IPPTIFN-ISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATK 269
+P IF + + L + N+L LP + L N+ L L N L P + TK
Sbjct: 76 LPAGIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTK 134
Query: 270 LIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTTESSSA-DQWSFLSSL 320
L L LG+N F L L L + N L A D+ + L +L
Sbjct: 135 LTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTL 186
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 68 PLHFGNLSFLVSLDISENNFHGHLPKEL-GQLRRLRVMSLAYNKLSGSFPSWIGVLSKLR 126
P F +L+ L L + N LPK + +L L+ + L N+L L++L+
Sbjct: 126 PRVFDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELK 184
Query: 127 ILRLDYNNFTGPIPNSLFN-LSRLEMLRAEFN 157
L+LD NN +P F+ L +L+ML+ + N
Sbjct: 185 TLKLD-NNQLKRVPEGAFDSLEKLKMLQLQEN 215
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 47/170 (27%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL---------YSHNYFL 500
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L Y +N
Sbjct: 67 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH 126
Query: 501 DILERLN------IMIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQ------- 539
+ E+L+ V +EYL +S IH + ED+V +
Sbjct: 127 NPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182
Query: 540 ------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
T + +MAPE + I + + DV+S+GVLL E FT
Sbjct: 183 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 47/170 (27%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL---------YSHNYFL 500
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L Y +N
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH 141
Query: 501 DILERLN------IMIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQ------- 539
+ E+L+ V +EYL +S IH + ED+V +
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 540 ------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
T + +MAPE + I + + DV+S+GVLL E FT
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 47/170 (27%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLY-------------SH 496
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L SH
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSH 141
Query: 497 N--YFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQ------- 539
N L + ++ V +EYL +S IH + ED+V +
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYL----ASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 540 ------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
T + +MAPE + I + + DV+S+GVLL E FT
Sbjct: 198 RDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 84/221 (38%), Gaps = 46/221 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLN 507
F E +V++ +RH L+++ + S +V E+M G L +L +L + + ++
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD 118
Query: 508 IMIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTTTMA------------------ 544
+ + S + Y+ H A I GE+ V +
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILV-GENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEMSLRRWVKESLPHR 603
I + APE G + K DV+S+G+LL E T+ R P M
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 221
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
EV+D V +C S+ DL C + P++R
Sbjct: 222 -REVLDQ--VERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 542 TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLP 601
++ I +MAPE G S D++SYGV+L E F+ ++
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG----------------LQPYCG 233
Query: 602 HRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655
+ +VV+ ++R Q DC + L ++C E P +R D ++L+
Sbjct: 234 YSNQDVVE--MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 88/222 (39%), Gaps = 48/222 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS-HNYFLDILERLN 507
F E ++++ ++H L+++ + S +V E+M GSL +L L + ++
Sbjct: 51 FLEEAQIMKKLKHDKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVD 109
Query: 508 IMIDVGSALEYLRHGH------SSAPIIHCEG--------------EDSVTQTTTMAT-- 545
+ V + + Y+ + SA I+ G ED+ A
Sbjct: 110 MAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFP 169
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTGEM--SLRRWVKESLPH 602
I + APE G + K DV+S+G+LL E T+ R P M E+ + R + P
Sbjct: 170 IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQ 229
Query: 603 RLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
DC +S+ +L + C + P++R
Sbjct: 230 ---------------------DCPISLHELMIHCWKKDPEER 250
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 542 TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLP 601
++ I +MAPE G S D++SYGV+L E F+ ++
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG----------------LQPYCG 250
Query: 602 HRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655
+ +VV+ ++R Q DC + L ++C E P +R D ++L+
Sbjct: 251 YSNQDVVE--MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 31/161 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F +E VLR RH N++ + + + A+V ++ SL K L+ + + ++I
Sbjct: 79 FRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDI 137
Query: 509 MIDVGSALEYL-------RHGHSSAPIIH------------------CEGEDSVTQTTTM 543
++YL R S+ +H G V Q T
Sbjct: 138 ARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT-- 195
Query: 544 ATIGYMAPEY---GSEGIVSAKCDVYSYGVLLMETFTRKRP 581
++ +MAPE S + DVYSYG++L E T + P
Sbjct: 196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 535 DSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + T + +MAPE + I S K DV+SYGVLL E F+
Sbjct: 254 DYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 14/145 (9%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERL-- 506
F +E V++ ++H L+K+ + + ++ EFM GSL +L S L +L
Sbjct: 224 FLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLID 282
Query: 507 -NIMIDVGSAL----EYLRHGHSSAPIIH-----CEGED-SVTQTTTMATIGYMAPEYGS 555
+ I G A Y+ +A I+ C+ D + + I + APE +
Sbjct: 283 FSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAIN 342
Query: 556 EGIVSAKCDVYSYGVLLMETFTRKR 580
G + K DV+S+G+LLME T R
Sbjct: 343 FGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + + L+LEF P G L K L H F D M +
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEE 123
Query: 512 VGSALEYLRHGHSSAPIIH-----------CEGE------------DSVTQTTTMATIGY 548
+ AL Y +IH +GE S+ + T+ Y
Sbjct: 124 LADALHYC----HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDY 179
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE K D++ GVL E P D
Sbjct: 180 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 20/170 (11%)
Query: 452 ECEVLRNVRHRNLIKI--ISSCSNPDFKALVLEFMPNGSLEKWLY--SHNYFLDILERLN 507
E EVL+ + H+N++K+ I + K L++EF P GSL L S+ Y L E L
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 508 IMIDVGSALEYLRHGH------SSAPIIHCEGED--SVTQTTTMATIGYMAPE------Y 553
++ DV + +LR I+ GED SV + T + + Y
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY 176
Query: 554 GSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHR 603
G+E + D+Y VL + + T ++++ ++ SLP R
Sbjct: 177 GTEEYLHP--DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + + L+LEF P G L K L H F D M +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEE 122
Query: 512 VGSALEYLRHGHSSAPIIH-----------CEGE------------DSVTQTTTMATIGY 548
+ AL Y +IH +GE S+ + T+ Y
Sbjct: 123 LADALHYC----HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDY 178
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE K D++ GVL E P D
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 507 NIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTT-MATIGYMAPEYGSEGIVSAKCDV 565
NI+I +A++ + G + A + +SV QT + T Y++PE V A+ DV
Sbjct: 146 NILISATNAVKVVDFGIARA---IADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 566 YSYGVLLMETFTRKRPTDEMFTGE 589
YS G +L E T + P FTG+
Sbjct: 203 YSLGCVLYEVLTGEPP----FTGD 222
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE EGI + K DV+SYG+LL E F+
Sbjct: 238 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + + L+LEF P G L K L H F D M +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEE 122
Query: 512 VGSALEYLRHGHSSAPIIH-----------CEGE------------DSVTQTTTMATIGY 548
+ AL Y +IH +GE S+ + T+ Y
Sbjct: 123 LADALHYC----HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDY 178
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE K D++ GVL E P D
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-------NYFLD 501
F +E +++ ++H+ L+++ + + ++ E+M NGSL +L + N LD
Sbjct: 64 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLD 122
Query: 502 ILERLNIMIDVGSALEYLRHGHSSAPII-----HC-----------EGEDSVTQTTTMAT 545
+ ++ + Y+ +A I+ C E + +
Sbjct: 123 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 182
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
I + APE + G + K DV+S+G+LL E T R
Sbjct: 183 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G + K L + F D + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITE 121
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +TT T+ Y
Sbjct: 122 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 177
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-------NYFLD 501
F +E +++ ++H+ L+++ + + ++ E+M NGSL +L + N LD
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 502 ILERLNIMIDVGSALEYLRHGHSSAPII-----HC-----------EGEDSVTQTTTMAT 545
+ ++ + Y+ +A I+ C E + +
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 179
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
I + APE + G + K DV+S+G+LL E T R
Sbjct: 180 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-------NYFLD 501
F +E +++ ++H+ L+++ + + ++ E+M NGSL +L + N LD
Sbjct: 63 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLD 121
Query: 502 ILERLNIMIDVGSALEYLRHGHSSAPII-----HC-----------EGEDSVTQTTTMAT 545
+ ++ + Y+ +A I+ C E + +
Sbjct: 122 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 181
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
I + APE + G + K DV+S+G+LL E T R
Sbjct: 182 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-------NYFLD 501
F +E +++ ++H+ L+++ + + ++ E+M NGSL +L + N LD
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 502 ILERLNIMIDVGSALEYLRHGHSSAPII-----HC-----------EGEDSVTQTTTMAT 545
+ ++ + Y+ +A I+ C E + +
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
I + APE + G + K DV+S+G+LL E T R
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-------NYFLD 501
F +E +++ ++H+ L+++ + + ++ E+M NGSL +L + N LD
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 502 ILERLNIMIDVGSALEYLRHGHSSAPII-----HC-----------EGEDSVTQTTTMAT 545
+ ++ + Y+ +A I+ C E + +
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
I + APE + G + K DV+S+G+LL E T R
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-------NYFLD 501
F +E +++ ++H+ L+++ + + ++ E+M NGSL +L + N LD
Sbjct: 56 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLD 114
Query: 502 ILERLNIMIDVGSALEYLRHGHSSAPII-----HC-----------EGEDSVTQTTTMAT 545
+ ++ + Y+ +A I+ C E + +
Sbjct: 115 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 174
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
I + APE + G + K DV+S+G+LL E T R
Sbjct: 175 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-------NYFLD 501
F +E +++ ++H+ L+++ + + ++ E+M NGSL +L + N LD
Sbjct: 57 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLD 115
Query: 502 ILERLNIMIDVGSALEYLRHGHSSAPII-----HC-----------EGEDSVTQTTTMAT 545
+ ++ + Y+ +A I+ C E + +
Sbjct: 116 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 175
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
I + APE + G + K DV+S+G+LL E T R
Sbjct: 176 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-------NYFLD 501
F +E +++ ++H+ L+++ + + ++ E+M NGSL +L + N LD
Sbjct: 51 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLD 109
Query: 502 ILERLNIMIDVGSALEYLRHGHSSAPII-----HC-----------EGEDSVTQTTTMAT 545
+ ++ + Y+ +A I+ C E + +
Sbjct: 110 MAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 169
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
I + APE + G + K DV+S+G+LL E T R
Sbjct: 170 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-------NYFLD 501
F +E +++ ++H+ L+++ + + ++ E+M NGSL +L + N LD
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 502 ILERLNIMIDVGSALEYLRHGHSSAPII-----HC-----------EGEDSVTQTTTMAT 545
+ ++ + Y+ +A I+ C E + +
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP 173
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
I + APE + G + K DV+S+G+LL E T R
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 72/184 (39%), Gaps = 39/184 (21%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSL--------------------- 489
+E E L+N+RH+++ ++ + +VLE+ P G L
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQ 116
Query: 490 ----EKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMAT 545
+++S Y L+ N++ D L+ + G + P +G T +
Sbjct: 117 IVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKP----KGNKDYHLQTCCGS 172
Query: 546 IGYMAPE-YGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE---------MFTGEMSLRRW 595
+ Y APE + + ++ DV+S G+LL P D+ + G+ + +W
Sbjct: 173 LAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKW 232
Query: 596 VKES 599
+ S
Sbjct: 233 LSPS 236
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 32/159 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS------------- 495
F +E V++ ++H L+K+ + + ++ EFM GSL +L S
Sbjct: 57 FLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLID 115
Query: 496 --------------HNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTT 541
NY L NI++ + G + E + +
Sbjct: 116 FSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV----IEDNEYTAREG 171
Query: 542 TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
I + APE + G + K DV+S+G+LLME T R
Sbjct: 172 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 20/170 (11%)
Query: 452 ECEVLRNVRHRNLIKI--ISSCSNPDFKALVLEFMPNGSLEKWLY--SHNYFLDILERLN 507
E EVL+ + H+N++K+ I + K L++EF P GSL L S+ Y L E L
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 508 IMIDVGSALEYLRHGH------SSAPIIHCEGED--SVTQTTTMATIGYMAPE------Y 553
++ DV + +LR I+ GED SV + T + + Y
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY 176
Query: 554 GSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHR 603
G+E + D+Y VL + + T ++++ ++ SLP R
Sbjct: 177 GTEEYLHP--DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-------NYFLD 501
F +E +++ ++H+ L+++ + + ++ E+M NGSL +L + N LD
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 502 ILERLNIMIDVGSALEYLRHGHSSAPII-----HC-----------EGEDSVTQTTTMAT 545
+ ++ + Y+ +A I+ C E + +
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 179
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
I + APE + G + K DV+S+G+LL E T R
Sbjct: 180 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-------NYFLD 501
F +E +++ ++H+ L+++ + + ++ E+M NGSL +L + N LD
Sbjct: 65 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLD 123
Query: 502 ILERLNIMIDVGSALEYLRHGHSSAPII-----HC-----------EGEDSVTQTTTMAT 545
+ ++ + Y+ +A I+ C E + +
Sbjct: 124 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 183
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
I + APE + G + K DV+S+G+LL E T R
Sbjct: 184 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-------NYFLD 501
F +E +++ ++H+ L+++ + + ++ E+M NGSL +L + N LD
Sbjct: 50 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLD 108
Query: 502 ILERLNIMIDVGSALEYLRHGHSSAPII-----HC-----------EGEDSVTQTTTMAT 545
+ ++ + Y+ +A I+ C E + +
Sbjct: 109 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 168
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
I + APE + G + K DV+S+G+LL E T R
Sbjct: 169 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-------NYFLD 501
F +E +++ ++H+ L+++ + + ++ E+M NGSL +L + N LD
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 502 ILERLNIMIDVGSALEYLRHGHSSAPII-----HC-----------EGEDSVTQTTTMAT 545
+ ++ + Y+ +A I+ C E + +
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 173
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
I + APE + G + K DV+S+G+LL E T R
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 24/155 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-------NYFLD 501
F +E +++ ++H+ L+++ + + ++ E+M NGSL +L + N LD
Sbjct: 60 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLD 118
Query: 502 ILERLNIMIDVGSALEYLRHGHSSAPII-----HC-----------EGEDSVTQTTTMAT 545
+ ++ + Y+ +A I+ C E + +
Sbjct: 119 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 178
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
I + APE + G + K DV+S+G+LL E T R
Sbjct: 179 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 29/166 (17%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITE 120
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +TT T+ Y
Sbjct: 121 LANALSYC----HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDY 176
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRR 594
+ PE + K D++S GVL E F P E T + + RR
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGMPPFEAHTYQETYRR 221
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 50/234 (21%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFM-----------PNG----SLEKWLY-- 494
E ++L+ +RH NL+ ++ C LV EF+ PNG ++K+L+
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI 133
Query: 495 --------SHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMATI 546
SHN ++ NI++ ++ G A + GE +AT
Sbjct: 134 INGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGF--ARTLAAPGE---VYDDEVATR 188
Query: 547 GYMAPEYGSEGIVSAKC-DVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVK-----ESL 600
Y APE + K DV++ G L+ E F + +F G+ + + +L
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFM----GEPLFPGDSDIDQLYHIMMCLGNL 244
Query: 601 PHRLSEVVDTNLV---------REEQAFSAKMDCLLS-IMDLALDCCMESPDKR 644
R E+ + N V +E + + L ++DLA C PDKR
Sbjct: 245 IPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKR 298
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 60/152 (39%), Gaps = 44/152 (28%)
Query: 464 LIKIISSCSNPDFKALVLEFMPNGSL----------EKWLYSHNYFLDILERLNIMIDVG 513
++++ + + + +V+E+MP G L EKW + Y +++ L+ + +G
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKW--AKFYTAEVVLALDAIHSMG 194
Query: 514 --------SALEYLRHGH------------SSAPIIHCEGEDSVTQTTTMATIGYMAPEY 553
+ +HGH ++HC+ T + T Y++PE
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCD--------TAVGTPDYISPEV 246
Query: 554 ----GSEGIVSAKCDVYSYGVLLMETFTRKRP 581
G +G +CD +S GV L E P
Sbjct: 247 LKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 96 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 155
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V ++YL + H +C ++ T +T
Sbjct: 156 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 215
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 216 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 77 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 136
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V ++YL + H +C ++ T +T
Sbjct: 137 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGA 196
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 30/156 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKA--LVLEFMPNGSLEKWLYSH---------- 496
+ E E+LR + H +++K C + K+ LV+E++P GSL +L H
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF 116
Query: 497 --------------NYFLDILERLNIMIDVGSALEYLRHGHSSA-PIIHCEGEDSVTQTT 541
+Y L N+++D ++ G + A P H E +
Sbjct: 117 AQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH---EYYRVRED 173
Query: 542 TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ + + APE E DV+S+GV L E T
Sbjct: 174 GDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 72/220 (32%), Gaps = 42/220 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH--NYFLDILERL 506
F E + ++ HRNLI++ P K +V E P GSL L H ++ L L R
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY 126
Query: 507 NIMIDVGSA-LEYLRHGHSSAP---------------------IIHCEGEDSVTQTTTMA 544
+ + G LE R H + + V Q
Sbjct: 127 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 186
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRL 604
+ APE S D + +GV L E FT + G L + KE
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----- 241
Query: 605 SEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
L R E DC I ++ + C P+ R
Sbjct: 242 -----ERLPRPE-------DCPQDIYNVMVQCWAHKPEDR 269
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 91/234 (38%), Gaps = 61/234 (26%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH------------NY 498
E + ++++H+N+++ + S S F + +E +P GSL L S Y
Sbjct: 54 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 113
Query: 499 FLDILERL----------------NIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTT 542
ILE L N++I+ S + + +S + G + T+T T
Sbjct: 114 TKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA---GINPCTETFT 170
Query: 543 MATIGYMAPE---YGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRR----W 595
T+ YMAPE G G A D++S G ++E T K P E+ + ++ +
Sbjct: 171 -GTLQYMAPEIIDKGPRGYGKA-ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK 228
Query: 596 VKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649
V +P +S E +AF L C PDKR D
Sbjct: 229 VHPEIPESMSA--------EAKAF-------------ILKCFEPDPDKRACAND 261
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 30/156 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKA--LVLEFMPNGSLEKWLYSH---------- 496
+ E E+LR + H +++K C + K+ LV+E++P GSL +L H
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF 117
Query: 497 --------------NYFLDILERLNIMIDVGSALEYLRHGHSSA-PIIHCEGEDSVTQTT 541
+Y L N+++D ++ G + A P H E +
Sbjct: 118 AQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH---EYYRVRED 174
Query: 542 TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ + + APE E DV+S+GV L E T
Sbjct: 175 GDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 70 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 129
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V ++YL + H +C ++ T +T
Sbjct: 130 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 189
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 190 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 55 ALNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGS 114
AL+LS++ + I + FL L ++ N+ LP E+ L LRV+ L++N+L+ S
Sbjct: 228 ALDLSNLQIFN-ISANIFKYDFLTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLT-S 284
Query: 115 FPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLEMLRAEFN 157
P+ +G +L+ ++N +P NL L+ L E N
Sbjct: 285 LPAELGSCFQLKYFYF-FDNMVTTLPWEFGNLCNLQFLGVEGN 326
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 32/159 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS------------- 495
F +E V++ ++H L+K+ + + ++ EFM GSL +L S
Sbjct: 230 FLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLID 288
Query: 496 --------------HNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTT 541
NY L NI++ + G + E + +
Sbjct: 289 FSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV----IEDNEYTAREG 344
Query: 542 TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580
I + APE + G + K DV+S+G+LLME T R
Sbjct: 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 97 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 156
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V ++YL + H +C ++ T +T
Sbjct: 157 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 216
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 217 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 24/145 (16%)
Query: 450 DSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSL-----EKWLYSHN------- 497
++E VLR ++H N++ + +P+ LV++ + G L EK Y+
Sbjct: 68 ENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR 127
Query: 498 YFLDILERLNIMIDVGSALE-----YLRHGHSSAPII------HCEGEDSVTQTTTMATI 546
LD + L+ M V L+ Y S +I EG+ V +T T
Sbjct: 128 QVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVM-STACGTP 186
Query: 547 GYMAPEYGSEGIVSAKCDVYSYGVL 571
GY+APE ++ S D +S GV+
Sbjct: 187 GYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 72/220 (32%), Gaps = 42/220 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH--NYFLDILERL 506
F E + ++ HRNLI++ P K +V E P GSL L H ++ L L R
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY 116
Query: 507 NIMIDVGSA-LEYLRHGHSSAP---------------------IIHCEGEDSVTQTTTMA 544
+ + G LE R H + + V Q
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 176
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRL 604
+ APE S D + +GV L E FT + G L + KE
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----- 231
Query: 605 SEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
L R E DC I ++ + C P+ R
Sbjct: 232 -----ERLPRPE-------DCPQDIYNVMVQCWAHKPEDR 259
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V ++YL + H +C ++ T +T
Sbjct: 138 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 197
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 75 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 134
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V ++YL + H +C ++ T +T
Sbjct: 135 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 194
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 195 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 76 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 135
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V ++YL + H +C ++ T +T
Sbjct: 136 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 195
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 90/233 (38%), Gaps = 44/233 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ ++ H +L++++ C +P + LV + MP+G L ++++ H + LN
Sbjct: 87 FMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 145
Query: 509 MIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTT------------------TMAT 545
+ + + YL H +A + + + V T
Sbjct: 146 CVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP 205
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRL 604
I +MA E + + DV+SYGV + E T +P D + T E+
Sbjct: 206 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIP------------- 252
Query: 605 SEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
+L+ + + C + + + + C M D R + AA+ ++
Sbjct: 253 ------DLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 299
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 77 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 136
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V ++YL + H +C ++ T +T
Sbjct: 137 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 196
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 89/226 (39%), Gaps = 49/226 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F +E VLR RH N++ + + P A+V ++ SL L++ ++ + ++I
Sbjct: 55 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDI 113
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQTTT--MATIG----------- 547
++YL H S IIH + ED+ + +AT+
Sbjct: 114 ARQTARGMDYL-HAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ 169
Query: 548 ------YMAPEY---GSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKE 598
+MAPE S + DVY++G++L E T + P + + + +
Sbjct: 170 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG 229
Query: 599 SLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
SL LS+V + +C + L +C + D+R
Sbjct: 230 SLSPDLSKV--------------RSNCPKRMKRLMAECLKKKRDER 261
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V ++YL + H +C ++ T +T
Sbjct: 138 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 197
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 120
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +TT T+ Y
Sbjct: 121 LANALSYC----HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 176
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 72/220 (32%), Gaps = 42/220 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH--NYFLDILERL 506
F E + ++ HRNLI++ P K +V E P GSL L H ++ L L R
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY 126
Query: 507 NIMIDVGSA-LEYLRHGHSSAP---------------------IIHCEGEDSVTQTTTMA 544
+ + G LE R H + + V Q
Sbjct: 127 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 186
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRL 604
+ APE S D + +GV L E FT + G L + KE
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----- 241
Query: 605 SEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
L R E DC I ++ + C P+ R
Sbjct: 242 -----ERLPRPE-------DCPQDIYNVMVQCWAHKPEDR 269
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 116
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +TT T+ Y
Sbjct: 117 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 172
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 72/220 (32%), Gaps = 42/220 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH--NYFLDILERL 506
F E + ++ HRNLI++ P K +V E P GSL L H ++ L L R
Sbjct: 62 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY 120
Query: 507 NIMIDVGSA-LEYLRHGHSSAP---------------------IIHCEGEDSVTQTTTMA 544
+ + G LE R H + + V Q
Sbjct: 121 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRL 604
+ APE S D + +GV L E FT + G L + KE
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----- 235
Query: 605 SEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
L R E DC I ++ + C P+ R
Sbjct: 236 -----ERLPRPE-------DCPQDIYNVMVQCWAHKPEDR 263
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 115
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +TT T+ Y
Sbjct: 116 LANALSYC----HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 171
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 113
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +TT T+ Y
Sbjct: 114 LANALSYC----HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 169
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 72/220 (32%), Gaps = 42/220 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH--NYFLDILERL 506
F E + ++ HRNLI++ P K +V E P GSL L H ++ L L R
Sbjct: 62 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY 120
Query: 507 NIMIDVGSA-LEYLRHGHSSAP---------------------IIHCEGEDSVTQTTTMA 544
+ + G LE R H + + V Q
Sbjct: 121 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRL 604
+ APE S D + +GV L E FT + G L + KE
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----- 235
Query: 605 SEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
L R E DC I ++ + C P+ R
Sbjct: 236 -----ERLPRPE-------DCPQDIYNVMVQCWAHKPEDR 263
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 117
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +TT T+ Y
Sbjct: 118 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDY 173
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 73 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 132
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V ++YL + H +C ++ T +T
Sbjct: 133 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 192
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 193 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 119
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +TT T+ Y
Sbjct: 120 LANALSYC----HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDY 175
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 25/191 (13%)
Query: 242 SLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNT-FGNLRHLSVLNVM 300
+LR+++YL LS N +G + +L LD+ F P++ F NL L VLN
Sbjct: 373 NLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLN-- 430
Query: 301 MNNLTTESSSADQWSFLSSLTNCRXXXXXXXXXXPLGGILPQLIGNFSA----------- 349
+++ ++S+ + L L + L Q++G+
Sbjct: 431 LSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSI 490
Query: 350 ------SLQNIYAFELGFNDLNGTIPTSIGTLQQLQGFYV--PENNLQGYVPHDLCHLER 401
L+N+ +L N L G S+ L L+G Y+ NN++ PH L L +
Sbjct: 491 DQQAFHGLRNVNHLDLSHNSLTGD---SMDALSHLKGLYLNMASNNIRIIPPHLLPALSQ 547
Query: 402 LNILNLSGNKL 412
+I+NLS N L
Sbjct: 548 QSIINLSHNPL 558
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 32/222 (14%)
Query: 94 ELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLF-NLSRLEML 152
+L LR L+ ++L+YN+ G +L +L + + + P+S F NL L +L
Sbjct: 370 QLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVL 429
Query: 153 RAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSXXXXXXXXXXXXXXSGLIP 212
++ + + L+ L +L NLQG G I
Sbjct: 430 NLSHCLLDTSNQHLLAGLQDLRHL-----NLQGN------------------SFQDGSIS 466
Query: 213 PT--IFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKL 270
T + + ++ IL L S L + H LRN+ +L LS N+L G +S+ + L
Sbjct: 467 KTNLLQMVGSLEILILSSCNLLS-IDQQAFHGLRNVNHLDLSHNSLTG---DSMDALSHL 522
Query: 271 IGLDLGFNSFSGHI--PNTFGNLRHLSVLNVMMNNLTTESSS 310
GL L S + I P+ L S++N+ N L S+
Sbjct: 523 KGLYLNMASNNIRIIPPHLLPALSQQSIINLSHNPLDCTCSN 564
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 72/220 (32%), Gaps = 42/220 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH--NYFLDILERL 506
F E + ++ HRNLI++ P K +V E P GSL L H ++ L L R
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY 116
Query: 507 NIMIDVGSA-LEYLRHGHSSAP---------------------IIHCEGEDSVTQTTTMA 544
+ + G LE R H + + V Q
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRL 604
+ APE S D + +GV L E FT + G L + KE
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----- 231
Query: 605 SEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
L R E DC I ++ + C P+ R
Sbjct: 232 -----ERLPRPE-------DCPQDIYNVMVQCWAHKPEDR 259
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 118
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +TT T+ Y
Sbjct: 119 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDY 174
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 87/226 (38%), Gaps = 49/226 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F +E VLR RH N++ + + P A+V ++ SL L++ ++ + ++I
Sbjct: 67 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDI 125
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQTTTM----------------- 543
++YL H S IIH + ED+ +
Sbjct: 126 ARQTARGMDYL-HAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ 181
Query: 544 --ATIGYMAPEY---GSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKE 598
+I +MAPE S + DVY++G++L E T + P + + + +
Sbjct: 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG 241
Query: 599 SLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
SL LS+V + +C + L +C + D+R
Sbjct: 242 SLSPDLSKV--------------RSNCPKRMKRLMAECLKKKRDER 273
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 119
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +TT T+ Y
Sbjct: 120 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 175
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 39/166 (23%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI-- 502
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L + Y DI
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 503 -LERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS------VTQTTTMAT---------- 545
E D+ S L G C D VT+ M
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 546 --------------IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 209 NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 119
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +TT T+ Y
Sbjct: 120 LANALSYC----HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 175
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 121
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +TT T+ Y
Sbjct: 122 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 177
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 91/234 (38%), Gaps = 61/234 (26%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH------------NY 498
E + ++++H+N+++ + S S F + +E +P GSL L S Y
Sbjct: 68 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 127
Query: 499 FLDILERL----------------NIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTT 542
ILE L N++I+ S + + +S + G + T+T T
Sbjct: 128 TKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA---GINPCTETFT 184
Query: 543 MATIGYMAPE---YGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRR----W 595
T+ YMAPE G G A D++S G ++E T K P E+ + ++ +
Sbjct: 185 -GTLQYMAPEIIDKGPRGYGKA-ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK 242
Query: 596 VKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649
V +P +S E +AF L C PDKR D
Sbjct: 243 VHPEIPESMSA--------EAKAF-------------ILKCFEPDPDKRACAND 275
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 72/220 (32%), Gaps = 42/220 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH--NYFLDILERL 506
F E + ++ HRNLI++ P K +V E P GSL L H ++ L L R
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY 116
Query: 507 NIMIDVGSA-LEYLRHGHSSAP---------------------IIHCEGEDSVTQTTTMA 544
+ + G LE R H + + V Q
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRL 604
+ APE S D + +GV L E FT + G L + KE
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----- 231
Query: 605 SEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
L R E DC I ++ + C P+ R
Sbjct: 232 -----ERLPRPE-------DCPQDIYNVMVQCWAHKPEDR 259
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 39/166 (23%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI-- 502
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L + Y DI
Sbjct: 135 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 194
Query: 503 -LERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS------VTQTTTMA----------- 544
E D+ S L G C D VT+ M
Sbjct: 195 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 254
Query: 545 -------------TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 255 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 89/239 (37%), Gaps = 68/239 (28%)
Query: 449 FDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYF-------- 499
F E EVL + H N+I ++ +C + + L +E+ P+G+L +L
Sbjct: 72 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 131
Query: 500 -------LDILERLNIMIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQTTTMA 544
L + L+ DV ++YL S IH + GE+ V +
Sbjct: 132 ANSTASTLSSQQLLHFAADVARGMDYL----SQKQFIHRDLAARNILVGENYVAKIADFG 187
Query: 545 -----------TIG-----YMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFT 587
T+G +MA E + + + DV+SYGVLL E + P M
Sbjct: 188 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 247
Query: 588 GEMSLRRWVKESLP--HRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
E+ E LP +RL + ++C + DL C E P +R
Sbjct: 248 AELY------EKLPQGYRLEK---------------PLNCDDEVYDLMRQCWREKPYER 285
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 89/239 (37%), Gaps = 68/239 (28%)
Query: 449 FDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYF-------- 499
F E EVL + H N+I ++ +C + + L +E+ P+G+L +L
Sbjct: 62 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 121
Query: 500 -------LDILERLNIMIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQTTTMA 544
L + L+ DV ++YL S IH + GE+ V +
Sbjct: 122 ANSTASTLSSQQLLHFAADVARGMDYL----SQKQFIHRDLAARNILVGENYVAKIADFG 177
Query: 545 -----------TIG-----YMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFT 587
T+G +MA E + + + DV+SYGVLL E + P M
Sbjct: 178 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 237
Query: 588 GEMSLRRWVKESLP--HRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
E+ E LP +RL + ++C + DL C E P +R
Sbjct: 238 AELY------EKLPQGYRLEK---------------PLNCDDEVYDLMRQCWREKPYER 275
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 28/153 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 142
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +TT T+ Y
Sbjct: 143 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 198
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ PE + K D++S GVL E K P
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 39/166 (23%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI-- 502
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L + Y DI
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 503 -LERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS------VTQTTTMAT---------- 545
E D+ S L G C D VT+ M
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 546 --------------IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 209 NIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 44/167 (26%)
Query: 451 SECEVLRNVRHR-NLIKIISSCSNPDFKALVL-EFMPNGSLEKWLYS-----------HN 497
SE ++L ++ H N++ ++ +C+ P +V+ EF G+L +L S +
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK 138
Query: 498 YFLDILERLNIMIDVGSALEYLRHGHSSAPIIH--------------------------- 530
FL + + V +E+L +S IH
Sbjct: 139 DFLTLEHLIXYSFQVAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDI 194
Query: 531 CEGEDSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 222 RILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNA-TKLIGLDLGFNSF 280
+IL L NQ++ +L + SL N++ L L +N L G +P + ++ T+L LDLG N
Sbjct: 43 QILYLHDNQIT-KLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQL 100
Query: 281 SGHIPNTFGNLRHLSVLNVMMNNLTTESSSADQWSFLSSL 320
+ F L HL L + N LT ++ + L+ L
Sbjct: 101 TVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHL 140
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 39/166 (23%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI-- 502
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L + Y DI
Sbjct: 76 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 135
Query: 503 -LERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS------VTQTTTMAT---------- 545
E D+ S L G C D VT+ M
Sbjct: 136 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDIN 195
Query: 546 --------------IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 196 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 28/153 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 133
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +TT T+ Y
Sbjct: 134 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 189
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ PE + K D++S GVL E K P
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 39/166 (23%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI-- 502
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L + Y DI
Sbjct: 78 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 137
Query: 503 -LERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS------VTQTTTMAT---------- 545
E D+ S L G C D VT+ M
Sbjct: 138 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 197
Query: 546 --------------IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 198 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 39/166 (23%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI-- 502
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L + Y DI
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 503 -LERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS------VTQTTTMAT---------- 545
E D+ S L G C D VT+ M
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 546 --------------IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 46/169 (27%)
Query: 451 SECEVLRNVRHR-NLIKIISSCSNPDFKALVL-EFMPNGSLEKWLYS------------- 495
SE ++L ++ H N++ ++ +C+ P +V+ EF G+L +L S
Sbjct: 81 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDL 140
Query: 496 HNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH------------------CE----- 532
+ FL + + V +E+L +S IH C+
Sbjct: 141 YKDFLTLEHLIXYSFQVAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 533 ----GEDSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 197 DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 39/166 (23%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI-- 502
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L + Y DI
Sbjct: 89 SEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 503 -LERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS------VTQTTTMAT---------- 545
E D+ S L G C D VT+ M
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 546 --------------IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 47/170 (27%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI-- 502
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L + Y DI
Sbjct: 89 SEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 503 --------LERLNIMIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQ------- 539
+ ++ + +EYL +S IH + E++V +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
Query: 540 ------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
T + +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 205 RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 30/156 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKA--LVLEFMPNGSLEK--------------- 491
+ E ++LR + H ++IK C + K+ LV+E++P GSL
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF 122
Query: 492 ---------WLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA-PIIHCEGEDSVTQTT 541
+L+S +Y L N+++D ++ G + A P H E +
Sbjct: 123 AQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH---EYYRVRED 179
Query: 542 TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ + + APE E DV+S+GV L E T
Sbjct: 180 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 39/166 (23%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI-- 502
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L + Y DI
Sbjct: 81 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 140
Query: 503 -LERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS------VTQTTTMAT---------- 545
E D+ S L G C D VT+ M
Sbjct: 141 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 200
Query: 546 --------------IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 201 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 38/158 (24%)
Query: 452 ECEVLRNVR-HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E E+L + HRN++++I D LV E M GS+ ++ +F + LE ++
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNE-LEASVVVQ 118
Query: 511 DVGSALEYL-----------------RHGHSSAPIIHCE----------GEDSVTQT--- 540
DV SAL++L H + +P+ C+ G+ S T
Sbjct: 119 DVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPEL 178
Query: 541 -TTMATIGYMAPE----YGSEG-IVSAKCDVYSYGVLL 572
T + YMAPE + E I +CD++S GV+L
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 90/233 (38%), Gaps = 44/233 (18%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E ++ ++ H +L++++ C +P + LV + MP+G L ++++ H + LN
Sbjct: 64 FMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 122
Query: 509 MIDVGSALEYLR-----HGHSSAPIIHCEGEDSVTQTT------------------TMAT 545
+ + + YL H +A + + + V T
Sbjct: 123 CVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP 182
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRL 604
I +MA E + + DV+SYGV + E T +P D + T E+
Sbjct: 183 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIP------------- 229
Query: 605 SEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657
+L+ + + C + + + + C M D R + AA+ ++
Sbjct: 230 ------DLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 276
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 47/170 (27%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI-- 502
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L + Y DI
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 503 --------LERLNIMIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQ------- 539
+ ++ + +EYL +S IH + E++V +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYL----ASQKCIHRDLAARNVLVTENNVMRIADFGLA 204
Query: 540 ------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
T + +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 205 RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 38/158 (24%)
Query: 452 ECEVLRNVR-HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E E+L + HRN++++I D LV E M GS+ ++ +F + LE ++
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNE-LEASVVVQ 118
Query: 511 DVGSALEYL-----------------RHGHSSAPIIHCE----------GEDSVTQT--- 540
DV SAL++L H + +P+ C+ G+ S T
Sbjct: 119 DVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPEL 178
Query: 541 -TTMATIGYMAPE----YGSEG-IVSAKCDVYSYGVLL 572
T + YMAPE + E I +CD++S GV+L
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 33/149 (22%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
+E +L+++ H N+IK+ + + LV EF G L + + + + F D + NIM
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF-DECDAANIMK 153
Query: 511 DVGSALEYLRHGHSSAPIIH---------CEGEDSVTQTTT------------------M 543
+ S + YL H H+ I+H E ++S+ +
Sbjct: 154 QILSGICYL-HKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL 209
Query: 544 ATIGYMAPEYGSEGIVSAKCDVYSYGVLL 572
T Y+APE + + KCDV+S GV++
Sbjct: 210 GTAYYIAPEVLKKK-YNEKCDVWSCGVIM 237
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 85/227 (37%), Gaps = 48/227 (21%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
+E ++ + H LI + + + L+LEF+ G L + + +Y + E +N M
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM- 155
Query: 511 DVGSALEYLRHGHSSAPIIH---------CEGE------------------DSVTQTTTM 543
A E L+H H + I+H CE + D + + TT
Sbjct: 156 --RQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT- 211
Query: 544 ATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHR 603
AT + APE V D+++ GVL + P F GE L
Sbjct: 212 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP----FAGEDDLE---------T 258
Query: 604 LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650
L V + +E AFS+ D + + P KR+ + DA
Sbjct: 259 LQNVKRCDWEFDEDAFSS---VSPEAKDFIKNLLQKEPRKRLTVHDA 302
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 35/163 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F +E VLR RH N++ + + P A+V ++ SL L+ ++++ ++I
Sbjct: 56 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 114
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQTTT--MATIG----------- 547
++YL H S IIH + ED + +AT+
Sbjct: 115 ARQTAQGMDYL-HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 548 ------YMAPEY---GSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+MAPE + S + DVY++G++L E T + P
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 35/163 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F +E VLR RH N++ + + P A+V ++ SL L+ ++++ ++I
Sbjct: 78 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 136
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQTTT--MATIG----------- 547
++YL H S IIH + ED + +AT+
Sbjct: 137 ARQTAQGMDYL-HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 192
Query: 548 ------YMAPEY---GSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+MAPE + S + DVY++G++L E T + P
Sbjct: 193 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 88/239 (36%), Gaps = 68/239 (28%)
Query: 449 FDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYF-------- 499
F E EVL + H N+I ++ +C + + L +E+ P+G+L +L
Sbjct: 69 FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 128
Query: 500 -------LDILERLNIMIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQTTTMA 544
L + L+ DV ++YL S IH GE+ V +
Sbjct: 129 ANSTASTLSSQQLLHFAADVARGMDYL----SQKQFIHRNLAARNILVGENYVAKIADFG 184
Query: 545 -----------TIG-----YMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFT 587
T+G +MA E + + + DV+SYGVLL E + P M
Sbjct: 185 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 244
Query: 588 GEMSLRRWVKESLP--HRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
E+ E LP +RL + ++C + DL C E P +R
Sbjct: 245 AELY------EKLPQGYRLEK---------------PLNCDDEVYDLMRQCWREKPYER 282
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 35/163 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F +E VLR RH N++ + + P A+V ++ SL L+ ++++ ++I
Sbjct: 53 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 111
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQTTT--MATIG----------- 547
++YL H S IIH + ED + +AT+
Sbjct: 112 ARQTAQGMDYL-HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 167
Query: 548 ------YMAPEY---GSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+MAPE + S + DVY++G++L E T + P
Sbjct: 168 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 35/163 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F +E VLR RH N++ + + P A+V ++ SL L+ ++++ ++I
Sbjct: 79 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 137
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQTTT--MATIG----------- 547
++YL H S IIH + ED + +AT+
Sbjct: 138 ARQTAQGMDYL-HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 193
Query: 548 ------YMAPEY---GSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+MAPE + S + DVY++G++L E T + P
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 35/163 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F +E VLR RH N++ + + P A+V ++ SL L+ ++++ ++I
Sbjct: 51 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 109
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQTTTM----------------- 543
++YL H S IIH + ED +
Sbjct: 110 ARQTAQGMDYL-HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 544 --ATIGYMAPEY---GSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+I +MAPE + S + DVY++G++L E T + P
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 79 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 138
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V +++L + H +C ++ T +T
Sbjct: 139 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGA 198
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 29/166 (17%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 121
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +TT T+ Y
Sbjct: 122 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDY 177
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRR 594
+ PE K D++S GVL E F +P E T + + +R
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKR 222
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 35/163 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F +E VLR RH N++ + + P A+V ++ SL L+ ++++ ++I
Sbjct: 79 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 137
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQTTTM----------------- 543
++YL H S IIH + ED +
Sbjct: 138 ARQTAQGMDYL-HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 193
Query: 544 --ATIGYMAPEY---GSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+I +MAPE + S + DVY++G++L E T + P
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 35/163 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F +E VLR RH N++ + + P A+V ++ SL L+ ++++ ++I
Sbjct: 56 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 114
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQTTT--MATIG----------- 547
++YL H S IIH + ED + +AT+
Sbjct: 115 ARQTAQGMDYL-HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 548 ------YMAPEY---GSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+MAPE + S + DVY++G++L E T + P
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Query: 211 IPPTIFN-ISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATK 269
+P +F+ ++ ++ L L NQL LP + L N+ YL L+ N L T
Sbjct: 100 LPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTN 158
Query: 270 LIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTT 306
L LDL +N F L L L + N L +
Sbjct: 159 LTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 35/163 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F +E VLR RH N++ + + P A+V ++ SL L+ ++++ ++I
Sbjct: 51 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 109
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQTTTM----------------- 543
++YL H S IIH + ED +
Sbjct: 110 ARQTAQGMDYL-HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 165
Query: 544 --ATIGYMAPEY---GSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+I +MAPE + S + DVY++G++L E T + P
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 87/226 (38%), Gaps = 49/226 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F +E VLR RH N++ + + P A+V ++ SL L++ ++ + ++I
Sbjct: 67 FKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDI 125
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQTTTM----------------- 543
++YL H S IIH + ED+ +
Sbjct: 126 ARQTARGMDYL-HAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ 181
Query: 544 --ATIGYMAPEY---GSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKE 598
+I +MAPE S + DVY++G++L E T + P + + + +
Sbjct: 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG 241
Query: 599 SLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
SL LS+V + +C + L +C + D+R
Sbjct: 242 SLSPDLSKV--------------RSNCPKRMKRLMAECLKKKRDER 273
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 44/167 (26%)
Query: 451 SECEVLRNVRHR-NLIKIISSCSNPDFKALVL-EFMPNGSLEKWLYS-----------HN 497
SE ++L ++ H N++ ++ +C+ P +V+ EF G+L +L S +
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK 138
Query: 498 YFLDILERLNIMIDVGSALEYLRHGHSSAPIIH------------------CE------- 532
FL + + V +E+L +S IH C+
Sbjct: 139 DFLTLEHLICYSFQVAKGMEFL----ASRKXIHRDLAARNILLSEKNVVKICDFGLARDI 194
Query: 533 --GEDSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 35/163 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F +E VLR RH N++ + + P A+V ++ SL L+ ++++ ++I
Sbjct: 71 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 129
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQTTTM----------------- 543
++YL H S IIH + ED +
Sbjct: 130 ARQTAQGMDYL-HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 185
Query: 544 --ATIGYMAPEY---GSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+I +MAPE + S + DVY++G++L E T + P
Sbjct: 186 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 83 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 142
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V +++L + H +C ++ T +T
Sbjct: 143 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 202
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 203 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 81/236 (34%), Gaps = 62/236 (26%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E +V+R + H N++K I + E++ G+L + S + +R++
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSF 113
Query: 509 MIDVGSALEYLRHGHSSAPIIH-------C--------------------------EG-- 533
D+ S + YL S IIH C EG
Sbjct: 114 AKDIASGMAYL----HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR 169
Query: 534 ----EDSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGE 589
D + T + +MAPE + K DV+S+G++L E R
Sbjct: 170 SLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGR----------- 218
Query: 590 MSLRRWVKESLPHRLSEVVDTNL-VREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644
+ P L +D L VR +C S + + CC P+KR
Sbjct: 219 -------VNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKR 267
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 137 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 196
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V +++L + H +C ++ T +T
Sbjct: 197 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 256
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 257 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 66/163 (40%), Gaps = 33/163 (20%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKAL-----VLEFMPNGSLEKWL-YSH----NY 498
F SE +++ H N+I+++ C + + +L FM G L +L YS
Sbjct: 83 FLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPK 142
Query: 499 FLDILERLNIMIDVGSALEYLRHG---HSSAPIIHCEGEDSVTQTTT------------- 542
+ + L M+D+ +EYL + H +C D +T
Sbjct: 143 HIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
Query: 543 -------MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR 578
+ ++A E ++ + ++K DV+++GV + E TR
Sbjct: 203 YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 76 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 135
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V +++L + H +C ++ T +T
Sbjct: 136 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 195
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 79 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 138
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V +++L + H +C ++ T +T
Sbjct: 139 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 198
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V +++L + H +C ++ T +T
Sbjct: 138 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 197
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKAL--VLEFMPNGSLEKWLYSHNYFLDILERL 506
+ E ++LR + H ++IK C + K+L V+E++P GSL +L H+ L L
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF 122
Query: 507 NIMIDVGSALEYLRH 521
I G A + +H
Sbjct: 123 AQQICEGMAYLHAQH 137
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALV-LEFMPNGSLEKWLYSHNYFLDILERLN 507
F +E ++++ H N++ ++ C + LV L +M +G L ++ + + + + +
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 508 IMIDVGSALEYL---RHGHSSAPIIHCEGEDSVT----------------------QTTT 542
+ V +++L + H +C ++ T +T
Sbjct: 138 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 197
Query: 543 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ +MA E + K DV+S+GVLL E TR P
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 29/166 (17%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITE 120
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S + T T+ Y
Sbjct: 121 LANALSYC----HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDY 176
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRR 594
+ PE + K D++S GVL E F P E T + + RR
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGMPPFEAHTYQETYRR 221
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 91/228 (39%), Gaps = 7/228 (3%)
Query: 97 QLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYN--NFTGPIPNSLFNLSRLEMLRA 154
+L+ L+ ++ NK +F L L L L N +F G S F + L+ L
Sbjct: 323 KLKSLKRLTFTSNKGGNAFSEV--DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDL 380
Query: 155 EFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSXXXXXXXXXXXXXXSGLIPPT 214
FN + T+ S L +L +L NL+ + + +
Sbjct: 381 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNG 439
Query: 215 IFN-ISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGL 273
IFN +S++ +L + N I LRN+ +L LS L P + + + L L
Sbjct: 440 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499
Query: 274 DLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTTESSSADQWSFLSSLT 321
++ N+F + L L VL+ +N++ T S + F SSL
Sbjct: 500 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT-SKKQELQHFPSSLA 546
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 71 FGNLSFLVSLDISENNFH-GHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILR 129
F LS L L ++ N+F LP +LR L + L+ +L P+ LS L++L
Sbjct: 441 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 500
Query: 130 LDYNNF 135
+ +NNF
Sbjct: 501 MSHNNF 506
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 58/157 (36%), Gaps = 52/157 (33%)
Query: 479 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL-----RHGHSSAPIIHCE- 532
LV+E+ PNGSL K+L H D + + V L YL R H I H +
Sbjct: 89 LVMEYYPNGSLXKYLSLHTS--DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDL 146
Query: 533 --------------------------------GEDSVTQTTTMATIGYMAPEYGSEGIVS 560
GE+ + + TI YMAPE EG V+
Sbjct: 147 NSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEV-LEGAVN 205
Query: 561 --------AKCDVYSYGVLLMETFTRKRPTDEMFTGE 589
+ D+Y+ G++ E F R ++F GE
Sbjct: 206 LRDXESALKQVDMYALGLIYWEIFMR---CTDLFPGE 239
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 35/163 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F +E VLR RH N++ + + P A+V ++ SL L+ ++++ ++I
Sbjct: 51 FKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 109
Query: 509 MIDVGSALEYLRHGHSSAPIIHCE--------GEDSVTQTTTM----------------- 543
++YL H S IIH + ED +
Sbjct: 110 ARQTAQGMDYL-HAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 544 --ATIGYMAPEY---GSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+I +MAPE + S + DVY++G++L E T + P
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 29/172 (16%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++ H N++++ + + L+LE+ P G L K L F D IM +
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTF-DEQRTATIMEE 131
Query: 512 VGSALEYLRHGHSSAPIIHCEGED-----------------------SVTQTTTMATIGY 548
+ AL Y HG +IH + + S+ + T T+ Y
Sbjct: 132 LADALMYC-HGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDY 187
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESL 600
+ PE + + K D++ GVL E P + E + RR VK L
Sbjct: 188 LPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE-TYRRIVKVDL 238
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 47/170 (27%)
Query: 451 SECEVLRNVRHR-NLIKIISSCSNPDFKALVL-EFMPNGSLEKWLYS------------- 495
SE ++L ++ H N++ ++ +C+ P +V+ EF G+L +L S
Sbjct: 80 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPED 139
Query: 496 -HNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH------------------CE---- 532
+ FL + + V +E+L +S IH C+
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
Query: 533 -----GEDSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G + K L + F D + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITE 121
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S + T+ Y
Sbjct: 122 LANALSYC----HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDY 177
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 30/156 (19%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKAL--VLEFMPNGSLEKWLYSH---------- 496
+ E ++LR + H ++IK C + +L V+E++P GSL +L H
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF 139
Query: 497 --------------NYFLDILERLNIMIDVGSALEYLRHGHSSA-PIIHCEGEDSVTQTT 541
+Y L N+++D ++ G + A P H E +
Sbjct: 140 AQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH---EXYRVRED 196
Query: 542 TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ + + APE E DV+S+GV L E T
Sbjct: 197 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 116
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +T T+ Y
Sbjct: 117 LANALSYC----HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDY 172
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 39/209 (18%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
+E ++R+ H N++ + SS D +V+EF+ G+L + +H ++ + + +
Sbjct: 91 NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIATVCL 148
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEG--------------EDSVTQTTTMATIGYM 549
V AL YL R S + ++ +G ++ + + T +M
Sbjct: 149 SVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWM 208
Query: 550 APEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR--RWVKESLP------ 601
APE S + D++S G++++E + P + E L+ R +++SLP
Sbjct: 209 APEVISRLPYGTEVDIWSLGIMVIEMIDGEPP----YFNEPPLQAMRRIRDSLPPRVKDL 264
Query: 602 HRLSEV----VDTNLVREEQAFSAKMDCL 626
H++S V +D LVRE + + L
Sbjct: 265 HKVSSVLRGFLDLMLVREPSQRATAQELL 293
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 69/166 (41%), Gaps = 39/166 (23%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-------NYFLD- 501
SE E+++ + +H+N+I ++ +C+ +++E+ G+L ++L + +Y ++
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINR 148
Query: 502 ILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS------VTQTTTMAT---------- 545
+ E D+ S L G C D VT+ M
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 546 --------------IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 209 NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 116
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +T T+ Y
Sbjct: 117 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDY 172
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 71 FGNLSFLVSLDISENNFHGH-LPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILR 129
F LS L L ++ N+F + LP +LR L + L+ +L P+ LS L++L
Sbjct: 146 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 205
Query: 130 LDYNNF 135
+ +NNF
Sbjct: 206 MSHNNF 211
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 87/220 (39%), Gaps = 5/220 (2%)
Query: 104 MSLAYNKLSGSFPSWIGVLSKLRILRLDYN--NFTGPIPNSLFNLSRLEMLRAEFNIIGG 161
+ L NKL L++L L L N +F G S F + L+ L FN +
Sbjct: 33 LELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI- 91
Query: 162 TIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSXXXXXXXXXXXXXXSGLIPPTIFN-IST 220
T+ S L +L +L NL+ + + + IFN +S+
Sbjct: 92 TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS 151
Query: 221 MRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSF 280
+ +L + N I LRN+ +L LS L P + + + L L++ N+F
Sbjct: 152 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211
Query: 281 SGHIPNTFGNLRHLSVLNVMMNNLTTESSSADQWSFLSSL 320
+ L L VL+ +N++ T S + F SSL
Sbjct: 212 FSLDTFPYKCLNSLQVLDYSLNHIMT-SKKQELQHFPSSL 250
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 48/171 (28%)
Query: 451 SECEVLRNVRHR-NLIKIISSCSNPDFKALVL-EFMPNGSLEKWLYS------------- 495
SE ++L ++ H N++ ++ +C+ P +V+ EF G+L +L S
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 496 --HNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH------------------CE--- 532
+ FL + + V +E+L +S IH C+
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 533 ------GEDSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 186 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 48/171 (28%)
Query: 451 SECEVLRNVRHR-NLIKIISSCSNPDFKALVL-EFMPNGSLEKWLYS------------- 495
SE ++L ++ H N++ ++ +C+ P +V+ EF G+L +L S
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 496 --HNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH------------------CE--- 532
+ FL + + V +E+L +S IH C+
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 533 ------GEDSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 186 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 121
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +T T+ Y
Sbjct: 122 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDY 177
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 116
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +T T+ Y
Sbjct: 117 LANALSYC----HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDY 172
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 48/171 (28%)
Query: 451 SECEVLRNVRHR-NLIKIISSCSNPDFKALVL-EFMPNGSLEKWLYS------------- 495
SE ++L ++ H N++ ++ +C+ P +V+ EF G+L +L S
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 138
Query: 496 --HNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH------------------CE--- 532
+ FL + + V +E+L +S IH C+
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 533 ------GEDSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 116
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +T T+ Y
Sbjct: 117 LANALSYC----HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDY 172
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 117
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S + T T+ Y
Sbjct: 118 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDY 173
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 117
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S +T T+ Y
Sbjct: 118 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDY 173
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 48/171 (28%)
Query: 451 SECEVLRNVRHR-NLIKIISSCSNPDFKALVL-EFMPNGSLEKWLYS------------- 495
SE ++L ++ H N++ ++ +C+ P +V+ EF G+L +L S
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 138
Query: 496 --HNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH------------------CE--- 532
+ FL + + V +E+L +S IH C+
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 533 ------GEDSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 195 ARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 48/171 (28%)
Query: 451 SECEVLRNVRHR-NLIKIISSCSNPDFKALVL-EFMPNGSLEKWLYS------------- 495
SE ++L ++ H N++ ++ +C+ P +V+ EF G+L +L S
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 496 --HNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH------------------CE--- 532
+ FL + + V +E+L +S IH C+
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 533 ------GEDSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 186 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 535 DSVTQTTTMATIGYMAPEYGSEGI----VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEM 590
DSV +T YMAPE + + S K D++S G+ ++E + P D T
Sbjct: 206 DSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ 265
Query: 591 SLRRWVKESLPH 602
L++ V+E P
Sbjct: 266 QLKQVVEEPSPQ 277
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 48/171 (28%)
Query: 451 SECEVLRNVRHR-NLIKIISSCSNPDFKALVL-EFMPNGSLEKWLYS------------- 495
SE ++L ++ H N++ ++ +C+ P +V+ EF G+L +L S
Sbjct: 116 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 175
Query: 496 --HNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH------------------CE--- 532
+ FL + + V +E+L +S IH C+
Sbjct: 176 DLYKDFLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGL 231
Query: 533 ------GEDSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 232 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 48/171 (28%)
Query: 451 SECEVLRNVRHR-NLIKIISSCSNPDFKALVL-EFMPNGSLEKWLYS------------- 495
SE ++L ++ H N++ ++ +C+ P +V+ EF G+L +L S
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 496 --HNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH------------------CE--- 532
+ FL + + V +E+L +S IH C+
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 533 ------GEDSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 186 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 48/171 (28%)
Query: 451 SECEVLRNVRHR-NLIKIISSCSNPDFKALVL-EFMPNGSLEKWLYS------------- 495
SE ++L ++ H N++ ++ +C+ P +V+ EF G+L +L S
Sbjct: 81 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPE 140
Query: 496 --HNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH------------------CE--- 532
+ FL + + V +E+L +S IH C+
Sbjct: 141 DLYKDFLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGL 196
Query: 533 ------GEDSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 197 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 48/171 (28%)
Query: 451 SECEVLRNVRHR-NLIKIISSCSNPDFKALVL-EFMPNGSLEKWLYS------------- 495
SE ++L ++ H N++ ++ +C+ P +V+ EF G+L +L S
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 138
Query: 496 --HNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH------------------CE--- 532
+ FL + + V +E+L +S IH C+
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFL----ASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 533 ------GEDSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 195 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 7/228 (3%)
Query: 97 QLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYN--NFTGPIPNSLFNLSRLEMLRA 154
+L+ L+ ++ NK +F L L L L N +F G S F L+ L
Sbjct: 347 KLKSLKRLTFTSNKGGNAFSEV--DLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDL 404
Query: 155 EFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSXXXXXXXXXXXXXXSGLIPPT 214
FN + T+ S L +L +L NL+ + + +
Sbjct: 405 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNG 463
Query: 215 IFN-ISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGL 273
IFN +S++ +L + N I LRN+ +L LS L P + + + L L
Sbjct: 464 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523
Query: 274 DLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTTESSSADQWSFLSSLT 321
++ N+F + L L VL+ +N++ T S + F SSL
Sbjct: 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT-SKKQELQHFPSSLA 570
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 71 FGNLSFLVSLDISENNFH-GHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILR 129
F LS L L ++ N+F LP +LR L + L+ +L P+ LS L++L
Sbjct: 465 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524
Query: 130 LDYNNF 135
+ +NNF
Sbjct: 525 MSHNNF 530
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 66/166 (39%), Gaps = 39/166 (23%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI-- 502
SE E+++ + +H+N+I ++ +C+ +++ + G+L ++L + Y DI
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 503 -LERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS------VTQTTTMAT---------- 545
E D+ S L G C D VT+ M
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 546 --------------IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 116
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S + T+ Y
Sbjct: 117 LANALSYC----HSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDY 172
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 59/155 (38%), Gaps = 30/155 (19%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYF------------ 499
E ++L +V H ++K+ + L+L+F+ G L L F
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 139
Query: 500 ---LDILERL----------NIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMATI 546
LD L L NI++D ++ G S I H + S T+
Sbjct: 140 ALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC-----GTV 194
Query: 547 GYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
YMAPE + S D +SYGVL+ E T P
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERL-N 507
F E +++ ++H L+++ + + + ++ E+M GSL +L S +L +L +
Sbjct: 55 FLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLID 114
Query: 508 IMIDVGSALEYLRHGH------SSAPIIHCEG--------------EDSVTQTTTMAT-- 545
+ + Y+ + +A ++ E ED+ A
Sbjct: 115 FSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP 174
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
I + APE + G + K DV+S+G+LL E T
Sbjct: 175 IKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+SYG+LL E F+
Sbjct: 218 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 213 PTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIG 272
PT S+ RI L N++S +P+ S RN+ L L +N L G + T T L
Sbjct: 26 PTGIPASSQRIF-LHGNRIS-YVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQ 83
Query: 273 LDLGFNSFSGHI-PNTFGNLRHLSVLNV 299
LDL N+ + P TF L HL L++
Sbjct: 84 LDLSDNAQLRVVDPTTFRGLGHLHTLHL 111
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+SYG+LL E F+
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+SYG+LL E F+
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 119
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S + T+ Y
Sbjct: 120 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDY 175
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+SYG+LL E F+
Sbjct: 224 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+SYG+LL E F+
Sbjct: 226 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 66/166 (39%), Gaps = 39/166 (23%)
Query: 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-----NYFLDI-- 502
SE E+++ + +H+N+I ++ +C+ +++ + G+L ++L + Y DI
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 503 -LERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS------VTQTTTMAT---------- 545
E D+ S L G C D VT+ M
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 546 --------------IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+S+GVL+ E FT
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+ +MAPE + + + + DV+SYG+LL E F+
Sbjct: 232 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 116
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S + T+ Y
Sbjct: 117 LANALSYC----HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDY 172
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 535 DSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 535 DSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 246 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 535 DSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 255 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 535 DSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
D V + + +MAPE + + + + DV+S+GVLL E F+
Sbjct: 253 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 116
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S + T+ Y
Sbjct: 117 LANALSYC----HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDY 172
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 119
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S + T+ Y
Sbjct: 120 LANALSYC----HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDY 175
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 118
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S + T+ Y
Sbjct: 119 LANALSYC----HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDY 174
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 28/155 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 119
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S + T+ Y
Sbjct: 120 LANALSYC----HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDY 175
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583
+ PE + K D++S GVL E K P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 245 NIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNL 304
NI L L+ N L + T ++L LD+GFN+ S P L L VLN+ N L
Sbjct: 26 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 85
Query: 305 TTESSSADQWSFLSSLT 321
+ S ++F ++LT
Sbjct: 86 SQLSDKT--FAFCTNLT 100
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 353 NIYAFELGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNL 407
N+ +L +N+LN S L QL+ F++ NN+Q H L L + LNL
Sbjct: 249 NLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNL 303
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 211 IPPTIFN-ISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATK 269
IP FN I ++R L L + + L N+ YL L+ NL +IPN +T K
Sbjct: 151 IPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL-REIPN-LTPLIK 208
Query: 270 LIGLDLGFNSFSGHIPNTFGNLRHLSVL 297
L LDL N S P +F L HL L
Sbjct: 209 LDELDLSGNHLSAIRPGSFQGLMHLQKL 236
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F ++ + H++L+ C D LV EF+ GSL+ +L + ++IL +L +
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV 118
Query: 509 MIDVGSALEYLR-----HGHSSA 526
+ +A+ +L HG+ A
Sbjct: 119 AKQLAAAMHFLEENTLIHGNVCA 141
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 245 NIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNL 304
NI L L+ N L + T ++L LD+GFN+ S P L L VLN+ N L
Sbjct: 31 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 90
Query: 305 TTESSSADQWSFLSSLT 321
+ S ++F ++LT
Sbjct: 91 SQLSDKT--FAFCTNLT 105
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 353 NIYAFELGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNL 407
N+ +L +N+LN S L QL+ F++ NN+Q H L L + LNL
Sbjct: 254 NLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNL 308
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 28/153 (18%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E E+ ++RH N++++ + L+LE+ P G++ + L + F D + +
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 142
Query: 512 VGSALEYLRHGHSSAPIIHCE-----------GE------------DSVTQTTTMATIGY 548
+ +AL Y S +IH + GE S + T+ Y
Sbjct: 143 LANALSYCH----SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDY 198
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
+ PE + K D++S GVL E K P
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 245 NIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNL 304
NI L L+ N L + T ++L LD+GFN+ S P L L VLN+ N L
Sbjct: 36 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 95
Query: 305 TTESSSADQWSFLSSLT 321
+ S ++F ++LT
Sbjct: 96 SQLSDKT--FAFCTNLT 110
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 353 NIYAFELGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNL 407
N+ +L +N+LN S L QL+ F++ NN+Q H L L + LNL
Sbjct: 259 NLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNL 313
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 71 FGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWI-GVLSKLRILR 129
F L+ L L +S+N +L +L ++ L NKL S P+ + L++L+ L
Sbjct: 48 FDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQ-SLPNGVFDKLTQLKELA 106
Query: 130 LDYNNFTGPIPNSLFN-LSRLEMLRAEFNIIGGTIPSRIGNLRKLVN 175
LD N +P+ +F+ L+ L+ + N + P RI L + +N
Sbjct: 107 LDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP-RIDYLSRWLN 151
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 63/151 (41%), Gaps = 23/151 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F SE +++N+ H +++K+I + +++E P G L +L + L +L +
Sbjct: 72 FMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY 130
Query: 509 MIDVGSALEYL------------RHGHSSAPII----------HCEGEDSVTQTTTMATI 546
+ + A+ YL R+ ++P + E ED + T I
Sbjct: 131 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 190
Query: 547 GYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+M+PE + + DV+ + V + E +
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 63/151 (41%), Gaps = 23/151 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F SE +++N+ H +++K+I + +++E P G L +L + L +L +
Sbjct: 60 FMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY 118
Query: 509 MIDVGSALEYL------------RHGHSSAPII----------HCEGEDSVTQTTTMATI 546
+ + A+ YL R+ ++P + E ED + T I
Sbjct: 119 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 178
Query: 547 GYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+M+PE + + DV+ + V + E +
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 63/151 (41%), Gaps = 23/151 (15%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F SE +++N+ H +++K+I + +++E P G L +L + L +L +
Sbjct: 56 FMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY 114
Query: 509 MIDVGSALEYL------------RHGHSSAPII----------HCEGEDSVTQTTTMATI 546
+ + A+ YL R+ ++P + E ED + T I
Sbjct: 115 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 174
Query: 547 GYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577
+M+PE + + DV+ + V + E +
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 25/147 (17%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E E+++++ H N+I++ + + LV+E G L + + F + + I
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES-DAARI 111
Query: 509 MIDVGSALEY---LRHGHS--------------SAPI------IHCEGEDSVTQTTTMAT 545
M DV SA+ Y L H +P+ + + T + T
Sbjct: 112 MKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGT 171
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLL 572
Y++P+ EG+ +CD +S GV++
Sbjct: 172 PYYVSPQV-LEGLYGPECDEWSAGVMM 197
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 25/147 (17%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F E E+++++ H N+I++ + + LV+E G L + + F + + I
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES-DAARI 128
Query: 509 MIDVGSALEY---LRHGHS--------------SAPI------IHCEGEDSVTQTTTMAT 545
M DV SA+ Y L H +P+ + + T + T
Sbjct: 129 MKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGT 188
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLL 572
Y++P+ EG+ +CD +S GV++
Sbjct: 189 PYYVSPQV-LEGLYGPECDEWSAGVMM 214
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 105/278 (37%), Gaps = 35/278 (12%)
Query: 53 VTALNLSDMGLGGTIPLHFGNLSF--LVSLDISENNFHGHLPKELGQLRRLRVMSLAYNK 110
+ L+L++ L T F L + L LD+S NN H L LR +SL YN
Sbjct: 224 IQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNN 283
Query: 111 LSGSFPSWIGVLSKLRILRLDYNNFT------GPIPN----SLFNLSRLEMLRAEFNIIG 160
+ P LS LR L L FT PN S L LE L + N I
Sbjct: 284 IQRLSPRSFYGLSNLRYLSLK-RAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIP 342
Query: 161 GTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIG----SXXXXXXXXXXXXXXSGLIPPTIF 216
T + L L L L Q T + S + T
Sbjct: 343 STKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGTFS 402
Query: 217 NISTMRILTLESNQLSGRLPSTIGHSLRNI--------EYLALSTNN--LIGKIPNSITN 266
+ +RIL L N++ +L LRNI +YL LST++ L+ + +
Sbjct: 403 WLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLR 462
Query: 267 ATKLIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNL 304
L +D+ P+ F LR+L++L++ NN+
Sbjct: 463 RVALKNVDIS--------PSPFRPLRNLTILDLSNNNI 492
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 245 NIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNL 304
NI L L+ N L P + T ++L LD GFNS S P L L VLN+ N L
Sbjct: 26 NITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNEL 85
Query: 305 TTESSSADQ-WSFLSSLT 321
S +DQ + F ++LT
Sbjct: 86 ---SQISDQTFVFCTNLT 100
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 80 LDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYN 133
+D S N H+PK+L R + +SL+ N +S I LS+LR+LRL +N
Sbjct: 36 VDYSNRNL-THVPKDLPP--RTKALSLSQNSISELRMPDISFLSELRVLRLSHN 86
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 10/142 (7%)
Query: 51 QRVTALNLSDMGLGG--TIPLHFGNLSFLVSLDISENNFHGH-LPKELGQLRRLRVMSLA 107
+R+ L L GL + L N+S L +LD+S N+ + H + + V++L+
Sbjct: 377 KRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLS 436
Query: 108 YNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRI 167
N L+GS + + K+++L L +NN IP + +L L+ L N +
Sbjct: 437 SNMLTGSV--FRCLPPKVKVLDL-HNNRIMSIPKDVTHLQALQELNVASNQLKSVPDGVF 493
Query: 168 GNLRKLVNLGL----WSCNLQG 185
L L + L W C G
Sbjct: 494 DRLTSLQYIWLHDNPWDCTCPG 515
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 26/146 (17%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E +L RHRN++ + S + + ++ EF+ + + + + + L+ E ++ +
Sbjct: 50 KEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVH 109
Query: 511 DVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMATIG----------------------- 547
V AL++L H H+ E+ + QT +TI
Sbjct: 110 QVCEALQFL-HSHNIGH-FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP 167
Query: 548 -YMAPEYGSEGIVSAKCDVYSYGVLL 572
Y APE +VS D++S G L+
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLV 193
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 72/187 (38%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+++ MP G L ++ H + LN +
Sbjct: 70 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 128
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 248
Query: 607 VVDTNLV 613
+D ++
Sbjct: 249 TIDVYMI 255
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 72/187 (38%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+++ MP G L ++ H + LN +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 246
Query: 607 VVDTNLV 613
+D ++
Sbjct: 247 TIDVYMI 253
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 72/187 (38%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+++ MP G L ++ H + LN +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 246
Query: 607 VVDTNLV 613
+D ++
Sbjct: 247 TIDVYMI 253
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 72/187 (38%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+++ MP G L ++ H + LN +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 246
Query: 607 VVDTNLV 613
+D ++
Sbjct: 247 TIDVYMI 253
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 72/187 (38%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+++ MP G L ++ H + LN +
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 251
Query: 607 VVDTNLV 613
+D ++
Sbjct: 252 TIDVYMI 258
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 72/187 (38%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+++ MP G L ++ H + LN +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 247
Query: 607 VVDTNLV 613
+D ++
Sbjct: 248 TIDVYMI 254
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 72/187 (38%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+++ MP G L ++ H + LN +
Sbjct: 70 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 128
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 188
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 248
Query: 607 VVDTNLV 613
+D ++
Sbjct: 249 TIDVYMI 255
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 72/187 (38%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+++ MP G L ++ H + LN +
Sbjct: 67 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCV 125
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 245
Query: 607 VVDTNLV 613
+D ++
Sbjct: 246 TIDVYMI 252
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 72/187 (38%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+++ MP G L ++ H + LN +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 244
Query: 607 VVDTNLV 613
+D ++
Sbjct: 245 TIDVYMI 251
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 72/187 (38%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+++ MP G L ++ H + LN +
Sbjct: 67 DEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 125
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 245
Query: 607 VVDTNLV 613
+D ++
Sbjct: 246 TIDVYMI 252
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 211 IPPTIFN-ISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNA-T 268
+P +F+ ++++ L L N+L LP+ + + L ++ YL LSTN L +PN + + T
Sbjct: 43 LPNGVFDELTSLTQLYLGGNKLQS-LPNGVFNKLTSLTYLNLSTNQL-QSLPNGVFDKLT 100
Query: 269 KLIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTT 306
+L L L N F L L L + N L +
Sbjct: 101 QLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKS 138
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 538 TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMS 591
QT + + APE + S+K DV+S+GVL+ E F+ ++P M E++
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 25/197 (12%)
Query: 250 ALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNL-TTES 308
+ T + ++P SI T+ L+L NS +TF +LRHL +L + N + E
Sbjct: 19 VICTRRELAEVPASIPVNTRY--LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEV 76
Query: 309 SSADQWSFLSSLT--NCRXXXXXXXXXXPLGGILPQLIGNFSASLQNIYAFELGFNDLNG 366
+ + L++L + R L + + N +++I ++ FN +
Sbjct: 77 GAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRN--NPIESIPSY--AFNRVPS 132
Query: 367 TIPTSIGTLQQLQGFYVPENNLQG-----YVPHDLCHLE---------RLNILNLSGNKL 412
+G L++L+ Y+ E +G Y+ +C+L+ RL L LSGN+L
Sbjct: 133 LRRLDLGELKRLE--YISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRL 190
Query: 413 SGHIPPCLASLTSLREL 429
P LTSLR+L
Sbjct: 191 DLIRPGSFQGLTSLRKL 207
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 67 IPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLR 126
+P N L +D+S N + + +L + L+YN+L P L LR
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 127 ILRLDYNNFTGPIPNSLFN 145
+L L N+ + +P FN
Sbjct: 106 LLSLHGNDISV-VPEGAFN 123
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 81 DISENNFHGH----LPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFT 136
D++E G+ +PKEL + L ++ L+ N++S +++L L L YN
Sbjct: 32 DVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 91
Query: 137 GPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWS------CNLQ 184
P + L L +L N I +L L +L + + CN+Q
Sbjct: 92 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQ 145
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 53/152 (34%), Gaps = 22/152 (14%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
+E VL+N RH L + + D V+E+ G L L F + R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 112
Query: 511 DVGSALEYL------------------RHGHSSAPIIHCEGE---DSVTQTTTMATIGYM 549
++ SALEYL + GH E D T T T Y+
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 550 APEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
APE + D + GV++ E + P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR 593
+ +M+PE +G+ + DV+S+GV+L E T + + E LR
Sbjct: 189 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 236
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 53/152 (34%), Gaps = 22/152 (14%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
+E VL+N RH L + + D V+E+ G L L F + R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 112
Query: 511 DVGSALEYL------------------RHGHSSAPIIHCEGE---DSVTQTTTMATIGYM 549
++ SALEYL + GH E D T T T Y+
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 550 APEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
APE + D + GV++ E + P
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR 593
+ +M+PE +G+ + DV+S+GV+L E T + + E LR
Sbjct: 198 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 245
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR 593
+ +M+PE +G+ + DV+S+GV+L E T + + E LR
Sbjct: 194 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 241
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 226 LESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIP 285
+ S+ L GRLP + L L N L G PN+ A+ + L LG N
Sbjct: 44 ISSDGLFGRLPHLV--------KLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISN 95
Query: 286 NTFGNLRHLSVLNVMMNNLT 305
F L L LN+ N ++
Sbjct: 96 KMFLGLHQLKTLNLYDNQIS 115
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 33/79 (41%)
Query: 351 LQNIYAFELGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGN 410
L ++ EL N L G P + +Q + EN ++ L +L LNL N
Sbjct: 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDN 112
Query: 411 KLSGHIPPCLASLTSLREL 429
++S +P L SL L
Sbjct: 113 QISCVMPGSFEHLNSLTSL 131
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR 593
+ +M+PE +G+ + DV+S+GV+L E T + + E LR
Sbjct: 197 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 244
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 22/154 (14%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E + L+ RH ++IK+ S P +V+E++ G L ++ H ++ +E +
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQ 119
Query: 512 VGSALEYL-RH---------------GHSSAPI----IHCEGEDSVTQTTTMATIGYMAP 551
+ SA++Y RH H +A I + D T+ + Y AP
Sbjct: 120 ILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAP 179
Query: 552 EYGSEGIVSA-KCDVYSYGVLLMETFTRKRPTDE 584
E S + + + D++S GV+L P D+
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 53/152 (34%), Gaps = 22/152 (14%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
+E VL+N RH L + + D V+E+ G L L F + R
Sbjct: 57 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 115
Query: 511 DVGSALEYL------------------RHGHSSAPIIHCEGE---DSVTQTTTMATIGYM 549
++ SALEYL + GH E D T T T Y+
Sbjct: 116 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 175
Query: 550 APEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
APE + D + GV++ E + P
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 58/156 (37%), Gaps = 29/156 (18%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
+E VL+N RH L + S D V+E+ G L L F + R
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 255
Query: 511 DVGSALEYLRHGHSSAPIIH-----------------------C-EG-EDSVTQTTTMAT 545
++ SAL+YL HS +++ C EG +D T T T
Sbjct: 256 EIVSALDYL---HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGT 312
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
Y+APE + D + GV++ E + P
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR 593
+ +M+PE +G+ + DV+S+GV+L E T + + E LR
Sbjct: 195 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 242
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR 593
+ +M+PE +G+ + DV+S+GV+L E T + + E LR
Sbjct: 226 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 273
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR 593
+ +M+PE +G+ + DV+S+GV+L E T + + E LR
Sbjct: 191 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 238
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR 593
+ +M+PE +G+ + DV+S+GV+L E T + + E LR
Sbjct: 191 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 238
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 43 GISCGSRHQRVTALNLS--DMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRR 100
G+ C + + L+LS D+ L NLS L +L++S N G + + +
Sbjct: 339 GVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQ 398
Query: 101 LRVMSLAYNKLSGSFP-SWIGVLSKLRILRLDY 132
L ++ LA+ +L + P S L L++L L Y
Sbjct: 399 LELLDLAFTRLHINAPQSPFQNLHFLQVLNLTY 431
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR 593
+ +M+PE +G+ + DV+S+GV+L E T + + E LR
Sbjct: 197 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 244
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLME 574
+ +MAPE +G+ + D++S+GV+L E
Sbjct: 193 VRWMAPESLKDGVFTTSSDMWSFGVVLWE 221
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLME 574
+ +MAPE +G+ + D++S+GV+L E
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR 593
+ +M+PE +G+ + DV+S+GV+L E T + + E LR
Sbjct: 198 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 245
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR 593
+ +M+PE +G+ + DV+S+GV+L E T + + E LR
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 251
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR 593
+ +M+PE +G+ + DV+S+GV+L E T + + E LR
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 251
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 58/156 (37%), Gaps = 29/156 (18%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
+E VL+N RH L + S D V+E+ G L L F + R
Sbjct: 200 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 258
Query: 511 DVGSALEYLRHGHSSAPIIH-----------------------C-EG-EDSVTQTTTMAT 545
++ SAL+YL HS +++ C EG +D T T T
Sbjct: 259 EIVSALDYL---HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGT 315
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
Y+APE + D + GV++ E + P
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLME 574
+ +MAPE +G+ + D++S+GV+L E
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
F ++ + H++L+ C D LV EF+ GSL+ +L + ++IL +L +
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV 118
Query: 509 MIDVGSALEYLR-----HGHSSAP-IIHCEGEDSVT 538
+ A+ +L HG+ A I+ ED T
Sbjct: 119 AKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKT 154
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 33/157 (21%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKA--LVLEFMPNGSLE----------KWLYSHNY 498
E ++LR +RH+N+I+++ N + + +V+E+ G E +H Y
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGY 114
Query: 499 FLDILERL----------------NIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTT 542
F +++ L N+++ G L+ G + A +H D T T+
Sbjct: 115 FCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEA--LHPFAADD-TCRTS 171
Query: 543 MATIGYMAPEY--GSEGIVSAKCDVYSYGVLLMETFT 577
+ + PE G + K D++S GV L T
Sbjct: 172 QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITT 208
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 61/156 (39%), Gaps = 34/156 (21%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL------------------ 493
E +L+ + H N++K++ + LV EF+ + L+K++
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 494 ---------YSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMA 544
+SH L+ N++I+ A++ G + A G T T +
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA-----FGVPVRTYTHEVV 172
Query: 545 TIGYMAPEY-GSEGIVSAKCDVYSYGVLLMETFTRK 579
T+ Y APE S D++S G + E TR+
Sbjct: 173 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3BIP|A Chain A, Crystal Structure Of Yeast Spt16 N-Terminal Domain
pdb|3BIP|B Chain B, Crystal Structure Of Yeast Spt16 N-Terminal Domain
pdb|3BIQ|A Chain A, Crystal Structure Of Yeast Spt16 N-Terminal Domain
Length = 467
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 233 GRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGNLR 292
GR P + S+ IEY+ + L+ PN N LIGL+ ++F ++ N + ++
Sbjct: 337 GRTPKEVYESV--IEYIEKTKPELV---PNFTKNIGSLIGLEFRDSNFILNVKNDYRKIQ 391
Query: 293 HLSVLNVM--MNNLTTESSSADQWS 315
N+ NNL +S SA+ ++
Sbjct: 392 RGDCFNISFGFNNL-KDSQSANNYA 415
>pdb|3BIT|A Chain A, Crystal Structure Of Yeast Spt16 N-Terminal Domain
pdb|3BIT|B Chain B, Crystal Structure Of Yeast Spt16 N-Terminal Domain
Length = 453
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 233 GRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGNLR 292
GR P + S+ IEY+ + L+ PN N LIGL+ ++F ++ N + ++
Sbjct: 337 GRTPKEVYESV--IEYIEKTKPELV---PNFTKNIGSLIGLEFRDSNFILNVKNDYRKIQ 391
Query: 293 HLSVLNVM--MNNLTTESSSADQWS 315
N+ NNL +S SA+ ++
Sbjct: 392 RGDCFNISFGFNNL-KDSQSANNYA 415
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLME 574
+ +MAPE +G+ + D++S+GV+L E
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLME 574
+ +MAPE +G+ + D++S+GV+L E
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 535 DSVTQTTTMATIGYMAPEYGSEGI----VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEM 590
D V + YMAPE + + S K D++S G+ ++E + P D T
Sbjct: 162 DDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ 221
Query: 591 SLRRWVKESLPH 602
L++ V+E P
Sbjct: 222 QLKQVVEEPSPQ 233
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 30/155 (19%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYF------------ 499
E ++L V H ++K+ + L+L+F+ G L L F
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 500 ---LDILERL----------NIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMATI 546
LD L L NI++D ++ G S I H + S T+
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-----GTV 190
Query: 547 GYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
YMAPE + + D +S+GVL+ E T P
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLME 574
+ +MAPE +G+ + D++S+GV+L E
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLME 574
+ +MAPE +G+ + D++S+GV+L E
Sbjct: 197 VRWMAPESLKDGVFTTSSDMWSFGVVLWE 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 30/155 (19%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYF------------ 499
E ++L V H ++K+ + L+L+F+ G L L F
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 136
Query: 500 ---LDILERL----------NIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMATI 546
LD L L NI++D ++ G S I H + S T+
Sbjct: 137 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-----GTV 191
Query: 547 GYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581
YMAPE + + D +S+GVL+ E T P
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 61/156 (39%), Gaps = 34/156 (21%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL------------------ 493
E +L+ + H N++K++ + LV EF+ + L+K++
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 494 ---------YSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMA 544
+SH L+ N++I+ A++ G + A G T T +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA-----FGVPVRTYTHEVV 165
Query: 545 TIGYMAPEY-GSEGIVSAKCDVYSYGVLLMETFTRK 579
T+ Y APE S D++S G + E TR+
Sbjct: 166 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Query: 211 IPPTIFN-ISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATK 269
+P +F+ ++ ++ L L NQL LP + L N+ YL L N L T
Sbjct: 100 LPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTN 158
Query: 270 LIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTT 306
L LDL N F L L L++ N L +
Sbjct: 159 LTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKS 195
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 191
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 251
Query: 607 VVDTNLV 613
+D ++
Sbjct: 252 TIDVYMI 258
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 251
Query: 607 VVDTNLV 613
+D ++
Sbjct: 252 TIDVYMI 258
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 90 HLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYN 133
H+PK+L Q + +++++ N +S + S I LSKLRIL + +N
Sbjct: 14 HVPKDLSQ--KTTILNISQNYISELWTSDILSLSKLRILIISHN 55
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 36/157 (22%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL------------------ 493
E +L+ + H N++K++ + LV EF+ + L+K++
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 494 ---------YSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMA 544
+SH L+ N++I+ A++ G + A G T T +
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA-----FGVPVRTYTHEVV 172
Query: 545 TIGYMAPEY--GSEGIVSAKCDVYSYGVLLMETFTRK 579
T+ Y APE G + S D++S G + E TR+
Sbjct: 173 TLWYRAPEILLGCK-YYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 507 NIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEGIVSAKCDVY 566
NI++D ++ G S I H + S T+ YMAPE + + D +
Sbjct: 156 NILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-----GTVEYMAPEVVNRRGHTQSADWW 210
Query: 567 SYGVLLMETFT 577
S+GVL+ E T
Sbjct: 211 SFGVLMFEMLT 221
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 546 IGYMAPEYGSEGIVSAKCDVYSYGVLLME 574
+ +MAPE +G+ + D++S+GV+L E
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWE 223
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 675
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 214 TIFNISTMRILTLESNQLSGR-LPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIG 272
++ ++ R + + N++S R PS +G +N N I N++ N ++IG
Sbjct: 14 SVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIG 73
Query: 273 LDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTT 306
LD H P+ +H + V +++ T
Sbjct: 74 LDY-------HHPDFEQESKHFTSKLVELDDKKT 100
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 29/121 (23%)
Query: 479 LVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS- 536
+ +EF G+LE+W+ LD + L + + ++Y+ S +IH + + S
Sbjct: 111 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH----SKKLIHRDLKPSN 166
Query: 537 ----------------VT-------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLM 573
VT +T + T+ YM+PE S + D+Y+ G++L
Sbjct: 167 IFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILA 226
Query: 574 E 574
E
Sbjct: 227 E 227
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 72 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 130
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 131 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 250
Query: 607 VVDTNLV 613
+D ++
Sbjct: 251 TIDVYMI 257
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 246
Query: 607 VVDTNLV 613
+D ++
Sbjct: 247 TIDVYMI 253
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 218 ISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGF 277
++ +I+T +++ + +LP+ + S R +E L L+ + + A + L +GF
Sbjct: 50 LNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGF 108
Query: 278 NSFSGHIPNTFGNLRHLSVLNVMMNNLTT 306
N+ P+ F N+ L+VL + N+L++
Sbjct: 109 NAIRYLPPHVFQNVPLLTVLVLERNDLSS 137
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 62/164 (37%), Gaps = 28/164 (17%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSL-----EKWLYSHNYFLD---- 501
+E VL + H N+IK+ P +LVLE + G L EK YS D
Sbjct: 97 TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ 156
Query: 502 ILERLNIMIDVGSALEYLRHGH-------SSAPIIHCE------GEDSVTQTTTMATIGY 548
ILE + + + G L+ + AP+ + E V T T GY
Sbjct: 157 ILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGY 216
Query: 549 MAPEYGSEGIVSAKCDVYSYGVLL------METFTRKRPTDEMF 586
APE + D++S G++ E F +R MF
Sbjct: 217 CAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF 260
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 251
Query: 607 VVDTNLV 613
+D ++
Sbjct: 252 TIDVYMI 258
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
pdb|2QXL|B Chain B, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
Length = 658
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 214 TIFNISTMRILTLESNQLSGR-LPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIG 272
++ ++ R + + N++S R PS +G +N N I N++ N ++IG
Sbjct: 13 SVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIG 72
Query: 273 LDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTT 306
LD H P+ +H + V +++ T
Sbjct: 73 LDY-------HHPDFEQESKHFTSKLVELDDKKT 99
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 246
Query: 607 VVDTNLV 613
+D ++
Sbjct: 247 TIDVYMI 253
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 244
Query: 607 VVDTNLV 613
+D ++
Sbjct: 245 TIDVYMI 251
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 247
Query: 607 VVDTNLV 613
+D ++
Sbjct: 248 TIDVYMI 254
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 247
Query: 607 VVDTNLV 613
+D ++
Sbjct: 248 TIDVYMI 254
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 58/147 (39%), Gaps = 30/147 (20%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
+E V+ + H NLI++ + + + LV+E++ G L + +Y L L+ + M
Sbjct: 135 NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK 194
Query: 511 DVGSALEYLRHGHSSAPIIH---------CEGEDSV-----------------TQTTTMA 544
+ E +RH H I+H C D+
Sbjct: 195 QI---CEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFG 250
Query: 545 TIGYMAPEYGSEGIVSAKCDVYSYGVL 571
T ++APE + VS D++S GV+
Sbjct: 251 TPEFLAPEVVNYDFVSFPTDMWSVGVI 277
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 72 GNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLD 131
NL L+ N G LG L L L+ N LS SW G LS L+ L L
Sbjct: 76 ANLQVLILKSSRINTIEGDAFYSLGSLEHL---DLSDNHLSSLSSSWFGPLSSLKYLNLM 132
Query: 132 YNNFTGPIPNSLF-NLSRLEMLR 153
N + SLF NL+ L+ LR
Sbjct: 133 GNPYQTLGVTSLFPNLTNLQTLR 155
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 218 ISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGF 277
++ +I+T + N +LP+ + S R +E L L+ + + A + L +GF
Sbjct: 44 LNNQKIVTFK-NSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGF 102
Query: 278 NSFSGHIPNTFGNLRHLSVLNVMMNNLTT 306
N+ P+ F N+ L+VL + N+L++
Sbjct: 103 NAIRYLPPHVFQNVPLLTVLVLERNDLSS 131
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 91 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 149
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 150 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 209
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 269
Query: 607 VVDTNLV 613
+D ++
Sbjct: 270 TIDVYMI 276
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 36/157 (22%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL------------------ 493
E +L+ + H N++K++ + LV EF+ + L+K++
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 494 ---------YSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMA 544
+SH L+ N++I+ A++ G + A G T T +
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA-----FGVPVRTYTHEVV 169
Query: 545 TIGYMAPEY--GSEGIVSAKCDVYSYGVLLMETFTRK 579
T+ Y APE G + S D++S G + E TR+
Sbjct: 170 TLWYRAPEILLGCK-YYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 36/157 (22%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL------------------ 493
E +L+ + H N++K++ + LV EF+ + L+K++
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 494 ---------YSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMA 544
+SH L+ N++I+ A++ G + A G T T +
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA-----FGVPVRTYTHEVV 166
Query: 545 TIGYMAPEY--GSEGIVSAKCDVYSYGVLLMETFTRK 579
T+ Y APE G + S D++S G + E TR+
Sbjct: 167 TLWYRAPEILLGCK-YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 36/157 (22%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL------------------ 493
E +L+ + H N++K++ + LV EF+ + L+K++
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 494 ---------YSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMA 544
+SH L+ N++I+ A++ G + A G T T +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA-----FGVPVRTYTHEVV 165
Query: 545 TIGYMAPEY--GSEGIVSAKCDVYSYGVLLMETFTRK 579
T+ Y APE G + S D++S G + E TR+
Sbjct: 166 TLWYRAPEILLGCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 36/157 (22%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL------------------ 493
E +L+ + H N++K++ + LV EF+ + L+K++
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 494 ---------YSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMA 544
+SH L+ N++I+ A++ G + A G T T +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA-----FGVPVRTYTHEVV 165
Query: 545 TIGYMAPEY--GSEGIVSAKCDVYSYGVLLMETFTRK 579
T+ Y APE G + S D++S G + E TR+
Sbjct: 166 TLWYRAPEILLGCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 36/157 (22%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL------------------ 493
E +L+ + H N++K++ + LV EF+ + L+K++
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 494 ---------YSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMA 544
+SH L+ N++I+ A++ G + A G T T +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA-----FGVPVRTYTHEVV 164
Query: 545 TIGYMAPEY--GSEGIVSAKCDVYSYGVLLMETFTRK 579
T+ Y APE G + S D++S G + E TR+
Sbjct: 165 TLWYRAPEILLGCK-YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 244
Query: 607 VVDTNLV 613
+D ++
Sbjct: 245 TIDVYMI 251
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 247
Query: 607 VVDTNLV 613
+D ++
Sbjct: 248 TIDVYMI 254
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 36/157 (22%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL------------------ 493
E +L+ + H N++K++ + LV EF+ + L+K++
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 494 ---------YSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMA 544
+SH L+ N++I+ A++ G + A G T T +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA-----FGVPVRTYTHEVV 164
Query: 545 TIGYMAPEY--GSEGIVSAKCDVYSYGVLLMETFTRK 579
T+ Y APE G + S D++S G + E TR+
Sbjct: 165 TLWYRAPEILLGCK-YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 36/157 (22%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL------------------ 493
E +L+ + H N++K++ + LV EF+ + L+K++
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 494 ---------YSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMA 544
+SH L+ N++I+ A++ G + A G T T +
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA-----FGVPVRTYTHEVV 164
Query: 545 TIGYMAPEY--GSEGIVSAKCDVYSYGVLLMETFTRK 579
T+ Y APE G + S D++S G + E TR+
Sbjct: 165 TLWYRAPEILLGCK-YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 25/197 (12%)
Query: 250 ALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNL-TTES 308
+ T + ++P SI T+ L+L NS +TF +LRHL +L + N + E
Sbjct: 19 VICTRRELAEVPASIPVNTRY--LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEV 76
Query: 309 SSADQWSFLSSLT--NCRXXXXXXXXXXPLGGILPQLIGNFSASLQNIYAFELGFNDLNG 366
+ + L++L + R L + + N +++I ++ FN +
Sbjct: 77 GAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRN--NPIESIPSY--AFNRVPS 132
Query: 367 TIPTSIGTLQQLQGFYVPENNLQG-----YVPHDLCHLE---------RLNILNLSGNKL 412
+G L++L+ Y+ E +G Y+ +C+L+ RL L LSGN+L
Sbjct: 133 LRRLDLGELKRLE--YISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRL 190
Query: 413 SGHIPPCLASLTSLREL 429
P LTSLR+L
Sbjct: 191 DLIRPGSFQGLTSLRKL 207
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 668
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 214 TIFNISTMRILTLESNQLSGR-LPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIG 272
++ ++ R + + N++S R PS +G +N N I N++ N ++IG
Sbjct: 16 SVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIG 75
Query: 273 LDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTT 306
LD H P+ +H + V +++ T
Sbjct: 76 LDY-------HHPDFEQESKHFTSKLVELDDKKT 102
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 36/157 (22%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL------------------ 493
E +L+ + H N++K++ + LV EF+ + L+K++
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 494 ---------YSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMA 544
+SH L+ N++I+ A++ G + A G T T +
Sbjct: 111 QLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA-----FGVPVRTYTHEVV 165
Query: 545 TIGYMAPEY--GSEGIVSAKCDVYSYGVLLMETFTRK 579
T+ Y APE G + S D++S G + E TR+
Sbjct: 166 TLWYRAPEILLGCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 675
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 214 TIFNISTMRILTLESNQLSGR-LPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIG 272
++ ++ R + + N++S R PS +G +N N I N++ N ++IG
Sbjct: 14 SVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIG 73
Query: 273 LDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTT 306
LD H P+ +H + V +++ T
Sbjct: 74 LDY-------HHPDFEQESKHFTSKLVELDDKKT 100
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCV 124
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 244
Query: 607 VVDTNLV 613
+D ++
Sbjct: 245 TIDVYMI 251
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 36/157 (22%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL------------------ 493
E +L+ + H N++K++ + LV EF+ + L+K++
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 494 ---------YSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVTQTTTMA 544
+SH L+ N++I+ A++ G + A G T T +
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARA-----FGVPVRTYTHEVV 165
Query: 545 TIGYMAPEY--GSEGIVSAKCDVYSYGVLLMETFTRK 579
T+ Y APE G + S D++S G + E TR+
Sbjct: 166 TLWYRAPEILLGCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 72 GNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLD 131
NL L+ N G LG L L L+ N LS SW G LS L+ L L
Sbjct: 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHL---DLSDNHLSSLSSSWFGPLSSLKYLNLM 106
Query: 132 YNNFTGPIPNSLF-NLSRLEMLR 153
N + SLF NL+ L+ LR
Sbjct: 107 GNPYQTLGVTSLFPNLTNLQTLR 129
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 244
Query: 607 VVDTNLV 613
+D ++
Sbjct: 245 TIDVYMI 251
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 63 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 121
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 122 QIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 241
Query: 607 VVDTNLV 613
+D ++
Sbjct: 242 TIDVYMI 248
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 29/117 (24%)
Query: 141 NSLFN-LSRLEMLRAEFNIIGGT-IPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSXXXXX 198
N +FN LS LE+L+ N +P LR L L L C L+
Sbjct: 438 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ------------- 484
Query: 199 XXXXXXXXXSGLIPPTIFN-ISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTN 254
+ PT FN +S++++L + SNQL +P I L +++ + L TN
Sbjct: 485 ------------LSPTAFNSLSSLQVLNMASNQLKS-VPDGIFDRLTSLQKIWLHTN 528
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%)
Query: 98 LRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLEMLRAEFN 157
L+ L+V++LAYNK++ L L++L L YN ++ + L ++ + + N
Sbjct: 289 LKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKN 348
Query: 158 IIGGTIPSRIGNLRKLVNLGL 178
I L KL L L
Sbjct: 349 HIAIIQDQTFKFLEKLQTLDL 369
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 244
Query: 607 VVDTNLV 613
+D ++
Sbjct: 245 TIDVYMI 251
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 536 SVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 585
+ + T + T +MAPE + +K D++S G+ +E + P +M
Sbjct: 174 QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 76 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 134
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 135 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 254
Query: 607 VVDTNLV 613
+D ++
Sbjct: 255 TIDVYMI 261
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 60 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 118
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 119 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSE 606
I + + DV+SYGV + E T +P D + E+S E LP
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPIC 238
Query: 607 VVDTNLV 613
+D ++
Sbjct: 239 TIDVYMI 245
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 25/165 (15%)
Query: 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMI 510
E V+ +V + ++ +++ C + L+ + MP G L ++ H + LN +
Sbjct: 100 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 158
Query: 511 DVGSALEYL-------RHGHSSAPIIHCEGEDSVTQTTTMATIGYMAPEYGSEG------ 557
+ + YL R + ++ +T +G EY +EG
Sbjct: 159 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 218
Query: 558 ----------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMS 591
I + + DV+SYGV + E T +P D + E+S
Sbjct: 219 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 263
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511
E + L+ RH ++IK+ S P +V+E++ G L ++ H ++ +E +
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQ 119
Query: 512 VGSALEY 518
+ SA++Y
Sbjct: 120 ILSAVDY 126
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 224 LTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNA-TKLIGLDLGFNSFSG 282
L L +NQ++ P H L N++ L ++N L IP + + T+L LDL N
Sbjct: 38 LWLNNNQITKLEPGVFDH-LVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLNDNHLKS 95
Query: 283 HIPNTFGNLRHLS 295
F NL+ L+
Sbjct: 96 IPRGAFDNLKSLT 108
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/152 (19%), Positives = 57/152 (37%), Gaps = 33/152 (21%)
Query: 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNI 508
+ E + R ++H N++++ S S F LV + + G L + + + Y+ + +
Sbjct: 50 LEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA----DA 105
Query: 509 MIDVGSALEYLRHGHSSAPIIH-------------CEGE---------------DSVTQT 540
+ LE + H H ++H C+G D
Sbjct: 106 SHCIQQILEAVLHCHQMG-VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWF 164
Query: 541 TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLL 572
T GY++PE + D+++ GV+L
Sbjct: 165 GFAGTPGYLSPEVLRKEAYGKPVDIWACGVIL 196
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 21/143 (14%)
Query: 450 DSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSL-----EKWLYSHN----YFL 500
++E VL+ ++H N++ + + LV++ + G L E+ +Y+
Sbjct: 54 ENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ 113
Query: 501 DILERLNIMIDVG--------SALEYLRHGHSSAPIIHCEGEDSVTQTTTMATI----GY 548
+L + + + G L YL +S +I G + Q M+T GY
Sbjct: 114 QVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGY 173
Query: 549 MAPEYGSEGIVSAKCDVYSYGVL 571
+APE ++ S D +S GV+
Sbjct: 174 VAPEVLAQKPYSKAVDCWSIGVI 196
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,007,599
Number of Sequences: 62578
Number of extensions: 698587
Number of successful extensions: 2883
Number of sequences better than 100.0: 518
Number of HSP's better than 100.0 without gapping: 293
Number of HSP's successfully gapped in prelim test: 225
Number of HSP's that attempted gapping in prelim test: 1913
Number of HSP's gapped (non-prelim): 868
length of query: 669
length of database: 14,973,337
effective HSP length: 105
effective length of query: 564
effective length of database: 8,402,647
effective search space: 4739092908
effective search space used: 4739092908
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)