Query 040540
Match_columns 669
No_of_seqs 420 out of 4249
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 09:25:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040540.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040540hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 8.6E-78 1.9E-82 709.1 48.8 643 7-660 27-954 (968)
2 PLN00113 leucine-rich repeat r 100.0 3.8E-39 8.2E-44 380.7 24.5 364 51-419 188-590 (968)
3 KOG1187 Serine/threonine prote 100.0 2.8E-36 6.1E-41 309.3 15.5 208 446-658 115-353 (361)
4 KOG4194 Membrane glycoprotein 100.0 1.1E-36 2.4E-41 306.0 7.3 368 52-434 79-449 (873)
5 KOG4194 Membrane glycoprotein 100.0 8.3E-35 1.8E-39 292.5 8.5 378 51-442 52-434 (873)
6 KOG0192 Tyrosine kinase specif 100.0 6.4E-34 1.4E-38 289.4 13.3 197 446-663 83-309 (362)
7 KOG0581 Mitogen-activated prot 100.0 9.6E-33 2.1E-37 266.3 9.5 186 446-652 121-334 (364)
8 KOG0444 Cytoskeletal regulator 100.0 2.4E-33 5.1E-38 283.7 -3.1 360 51-436 7-374 (1255)
9 KOG0472 Leucine-rich repeat pr 100.0 4.7E-34 1E-38 275.3 -9.9 371 51-437 68-541 (565)
10 KOG0197 Tyrosine kinases [Sign 100.0 3.5E-31 7.5E-36 267.7 7.3 194 444-660 243-464 (468)
11 KOG4721 Serine/threonine prote 100.0 3.5E-30 7.6E-35 258.3 8.5 188 451-661 161-372 (904)
12 KOG0444 Cytoskeletal regulator 100.0 6.2E-31 1.3E-35 266.3 -3.6 351 72-444 4-358 (1255)
13 KOG0615 Serine/threonine prote 100.0 2.4E-29 5.2E-34 244.3 7.5 185 448-652 222-436 (475)
14 KOG0578 p21-activated serine/t 100.0 3.1E-29 6.8E-34 254.0 7.9 183 447-652 315-522 (550)
15 KOG0575 Polo-like serine/threo 100.0 5.3E-29 1.1E-33 254.4 8.8 181 447-652 63-268 (592)
16 KOG1026 Nerve growth factor re 100.0 5.9E-29 1.3E-33 264.0 6.9 193 445-660 532-765 (774)
17 KOG0472 Leucine-rich repeat pr 99.9 2.5E-31 5.5E-36 256.5 -12.3 362 52-437 46-494 (565)
18 KOG0595 Serine/threonine-prote 99.9 2.6E-28 5.6E-33 237.6 7.0 133 448-585 55-217 (429)
19 KOG0582 Ste20-like serine/thre 99.9 7.1E-28 1.5E-32 236.4 8.8 192 447-652 69-292 (516)
20 PHA02988 hypothetical protein; 99.9 1.6E-27 3.5E-32 240.8 9.4 191 447-659 63-281 (283)
21 KOG0201 Serine/threonine prote 99.9 5.6E-28 1.2E-32 237.1 4.2 183 446-652 55-262 (467)
22 KOG0574 STE20-like serine/thre 99.9 6.5E-28 1.4E-32 224.3 3.6 192 440-652 66-282 (502)
23 KOG0198 MEKK and related serin 99.9 2.4E-27 5.1E-32 233.7 7.0 187 446-653 58-276 (313)
24 KOG1095 Protein tyrosine kinas 99.9 2.5E-27 5.5E-32 260.9 7.9 194 446-662 739-966 (1025)
25 KOG0591 NIMA (never in mitosis 99.9 3.5E-27 7.6E-32 218.0 7.0 186 446-650 62-278 (375)
26 KOG0194 Protein tyrosine kinas 99.9 2.4E-27 5.3E-32 244.1 4.3 194 445-661 204-424 (474)
27 KOG0193 Serine/threonine prote 99.9 4.3E-27 9.3E-32 239.2 5.9 201 441-661 427-657 (678)
28 cd05064 PTKc_EphR_A10 Catalyti 99.9 5.4E-26 1.2E-30 227.9 11.6 188 447-657 51-265 (266)
29 KOG4279 Serine/threonine prote 99.9 1.2E-26 2.7E-31 237.7 6.3 185 447-652 617-831 (1226)
30 cd05102 PTKc_VEGFR3 Catalytic 99.9 7.7E-26 1.7E-30 235.2 11.8 191 447-659 55-336 (338)
31 KOG0196 Tyrosine kinase, EPH ( 99.9 3.6E-27 7.7E-32 245.4 0.0 192 446-660 674-894 (996)
32 KOG0033 Ca2+/calmodulin-depend 99.9 2.7E-26 5.8E-31 207.9 5.2 187 445-652 53-266 (355)
33 KOG0588 Serine/threonine prote 99.9 6.4E-26 1.4E-30 232.7 8.6 180 448-652 58-262 (786)
34 KOG0584 Serine/threonine prote 99.9 4.4E-26 9.6E-31 233.5 7.4 184 446-652 85-295 (632)
35 KOG4278 Protein tyrosine kinas 99.9 3.6E-26 7.9E-31 231.5 5.7 192 444-658 305-524 (1157)
36 PF07714 Pkinase_Tyr: Protein 99.9 5.1E-26 1.1E-30 227.0 5.8 186 446-654 45-259 (259)
37 KOG0661 MAPK related serine/th 99.9 1.4E-25 3.1E-30 221.9 8.3 188 451-653 57-291 (538)
38 KOG0598 Ribosomal protein S6 k 99.9 3.1E-25 6.7E-30 214.5 9.4 175 448-646 71-270 (357)
39 KOG0583 Serine/threonine prote 99.9 3.3E-25 7.1E-30 228.1 10.1 178 449-651 66-273 (370)
40 cd05094 PTKc_TrkC Catalytic do 99.9 7E-25 1.5E-29 223.0 12.3 191 447-660 52-285 (291)
41 cd05106 PTKc_CSF-1R Catalytic 99.9 6.4E-25 1.4E-29 230.6 12.2 189 448-658 87-373 (374)
42 cd05048 PTKc_Ror Catalytic Dom 99.9 6E-25 1.3E-29 222.6 11.5 187 448-657 54-283 (283)
43 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 6.8E-25 1.5E-29 220.8 11.8 182 448-654 62-273 (274)
44 cd05114 PTKc_Tec_Rlk Catalytic 99.9 8E-25 1.7E-29 218.2 11.9 185 447-654 44-255 (256)
45 cd05104 PTKc_Kit Catalytic dom 99.9 8.1E-25 1.8E-29 230.0 12.4 188 448-657 84-374 (375)
46 KOG0618 Serine/threonine phosp 99.9 1.1E-26 2.5E-31 246.4 -2.2 362 52-435 46-487 (1081)
47 KOG0599 Phosphorylase kinase g 99.9 2.8E-25 6.1E-30 204.3 6.9 182 450-652 70-282 (411)
48 cd05096 PTKc_DDR1 Catalytic do 99.9 8.2E-25 1.8E-29 224.0 10.6 194 447-656 64-304 (304)
49 KOG0579 Ste20-like serine/thre 99.9 8.1E-25 1.7E-29 222.2 9.6 187 445-652 72-288 (1187)
50 cd05111 PTK_HER3 Pseudokinase 99.9 8.1E-25 1.7E-29 221.0 9.5 189 448-660 55-271 (279)
51 cd05093 PTKc_TrkB Catalytic do 99.9 2.3E-24 5.1E-29 218.8 12.8 191 447-660 52-282 (288)
52 cd06649 PKc_MEK2 Catalytic dom 99.9 1.3E-24 2.9E-29 224.9 11.1 200 447-653 48-301 (331)
53 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 1.4E-24 2.9E-29 216.8 10.7 182 448-654 45-257 (258)
54 cd05052 PTKc_Abl Catalytic dom 99.9 2.6E-24 5.5E-29 215.5 12.2 188 447-657 47-262 (263)
55 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 2.5E-24 5.5E-29 215.2 12.1 182 448-654 50-261 (262)
56 KOG0577 Serine/threonine prote 99.9 4.4E-25 9.6E-30 222.7 6.0 183 447-652 71-277 (948)
57 cd05105 PTKc_PDGFR_alpha Catal 99.9 1.7E-24 3.7E-29 228.2 10.7 190 447-658 85-398 (400)
58 cd05063 PTKc_EphR_A2 Catalytic 99.9 2.6E-24 5.7E-29 216.0 11.3 188 447-657 51-267 (268)
59 cd08228 STKc_Nek6 Catalytic do 99.9 3.2E-24 6.9E-29 215.3 11.9 192 447-658 47-266 (267)
60 cd05115 PTKc_Zap-70 Catalytic 99.9 2.7E-24 5.8E-29 214.4 11.2 187 447-657 40-255 (257)
61 cd05089 PTKc_Tie1 Catalytic do 99.9 4.3E-24 9.3E-29 217.8 12.5 196 447-665 47-283 (297)
62 cd05033 PTKc_EphR Catalytic do 99.9 4.6E-24 1E-28 214.0 12.0 188 447-657 50-265 (266)
63 cd05072 PTKc_Lyn Catalytic dom 99.9 3.4E-24 7.3E-29 214.3 10.7 188 447-657 46-261 (261)
64 cd05108 PTKc_EGFR Catalytic do 99.9 1.4E-24 3E-29 223.5 8.0 190 447-660 54-271 (316)
65 cd05049 PTKc_Trk Catalytic dom 99.9 4E-24 8.6E-29 216.2 11.2 187 447-656 53-280 (280)
66 PTZ00267 NIMA-related protein 99.9 3.1E-24 6.8E-29 232.4 11.1 182 448-652 111-322 (478)
67 KOG2345 Serine/threonine prote 99.9 2.1E-24 4.5E-29 196.4 8.0 193 448-658 64-301 (302)
68 cd05113 PTKc_Btk_Bmx Catalytic 99.9 5.4E-24 1.2E-28 212.1 11.9 186 447-655 44-256 (256)
69 KOG0592 3-phosphoinositide-dep 99.9 3.3E-24 7.2E-29 215.7 10.1 180 448-652 119-337 (604)
70 cd05084 PTKc_Fes Catalytic dom 99.9 2.1E-24 4.6E-29 214.6 8.5 185 448-655 39-251 (252)
71 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 2.8E-24 6.1E-29 217.7 9.5 201 447-658 51-282 (283)
72 cd05631 STKc_GRK4 Catalytic do 99.9 5.7E-24 1.2E-28 215.5 11.6 185 448-652 46-260 (285)
73 cd05088 PTKc_Tie2 Catalytic do 99.9 2.5E-24 5.4E-29 220.1 8.7 193 447-662 52-285 (303)
74 cd08229 STKc_Nek7 Catalytic do 99.9 8.5E-24 1.8E-28 212.2 12.0 191 447-657 47-265 (267)
75 cd05101 PTKc_FGFR2 Catalytic d 99.9 3.2E-24 7E-29 219.6 8.9 193 447-662 65-301 (304)
76 KOG4257 Focal adhesion tyrosin 99.9 3.8E-24 8.2E-29 217.3 9.0 191 446-660 435-652 (974)
77 cd05059 PTKc_Tec_like Catalyti 99.9 7.1E-24 1.5E-28 211.3 11.0 184 448-654 45-255 (256)
78 KOG0580 Serine/threonine prote 99.9 4.3E-24 9.3E-29 193.6 8.4 182 447-652 67-272 (281)
79 KOG0610 Putative serine/threon 99.9 5.3E-24 1.1E-28 207.7 9.6 182 448-651 123-390 (459)
80 cd08529 STKc_FA2-like Catalyti 99.9 7.2E-24 1.6E-28 211.3 11.0 183 447-652 44-252 (256)
81 KOG0596 Dual specificity; seri 99.9 2.9E-24 6.3E-29 216.1 8.0 186 446-652 403-626 (677)
82 KOG0593 Predicted protein kina 99.9 6.5E-24 1.4E-28 198.5 9.7 196 450-652 49-283 (396)
83 cd05047 PTKc_Tie Catalytic dom 99.9 9.9E-24 2.1E-28 212.1 11.9 189 447-658 40-269 (270)
84 cd05066 PTKc_EphR_A Catalytic 99.9 7.8E-24 1.7E-28 212.5 11.2 188 447-657 50-266 (267)
85 cd05585 STKc_YPK1_like Catalyt 99.9 4.4E-24 9.6E-29 219.2 9.6 177 448-649 39-240 (312)
86 cd05068 PTKc_Frk_like Catalyti 99.9 1E-23 2.2E-28 210.9 11.7 188 447-657 46-261 (261)
87 KOG4645 MAPKKK (MAP kinase kin 99.9 6.3E-25 1.4E-29 240.7 3.1 184 446-652 1278-1493(1509)
88 cd05065 PTKc_EphR_B Catalytic 99.9 9.3E-24 2E-28 212.2 11.4 188 447-657 50-268 (269)
89 cd05045 PTKc_RET Catalytic dom 99.9 7.7E-24 1.7E-28 215.2 11.0 190 447-659 48-288 (290)
90 cd05054 PTKc_VEGFR Catalytic d 99.9 1.3E-23 2.8E-28 217.6 12.8 190 448-659 56-335 (337)
91 cd05571 STKc_PKB Catalytic dom 99.9 4.2E-24 9.2E-29 220.4 9.1 180 448-652 41-250 (323)
92 cd08227 PK_STRAD_alpha Pseudok 99.9 6.8E-24 1.5E-28 219.4 10.6 206 448-658 45-314 (327)
93 cd05055 PTKc_PDGFR Catalytic d 99.9 1.2E-23 2.5E-28 215.0 12.1 189 447-657 83-301 (302)
94 KOG0589 Serine/threonine prote 99.9 4.5E-24 9.7E-29 215.7 8.6 183 448-653 49-258 (426)
95 cd05148 PTKc_Srm_Brk Catalytic 99.9 1.1E-23 2.5E-28 210.5 11.5 187 448-657 48-261 (261)
96 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 4.3E-24 9.4E-29 216.4 8.5 202 447-658 50-284 (284)
97 cd05612 STKc_PRKX_like Catalyt 99.9 4.7E-24 1E-28 216.7 8.8 180 448-652 47-253 (291)
98 cd05044 PTKc_c-ros Catalytic d 99.9 1.5E-23 3.2E-28 210.7 12.2 186 448-656 45-269 (269)
99 cd05116 PTKc_Syk Catalytic dom 99.9 9.8E-24 2.1E-28 210.4 10.8 186 447-657 41-255 (257)
100 cd05060 PTKc_Syk_like Catalyti 99.9 1.2E-23 2.6E-28 209.8 11.3 187 447-658 41-256 (257)
101 cd05085 PTKc_Fer Catalytic dom 99.9 1.3E-23 2.9E-28 208.6 11.5 185 448-655 38-249 (250)
102 cd05098 PTKc_FGFR1 Catalytic d 99.9 1.2E-23 2.7E-28 215.5 11.5 193 448-663 69-305 (307)
103 cd05062 PTKc_IGF-1R Catalytic 99.9 9.8E-24 2.1E-28 213.0 10.6 186 448-656 55-277 (277)
104 cd05053 PTKc_FGFR Catalytic do 99.9 1.3E-23 2.8E-28 214.0 11.5 188 448-658 61-292 (293)
105 cd05058 PTKc_Met_Ron Catalytic 99.9 2.1E-23 4.4E-28 208.8 12.6 189 447-658 41-260 (262)
106 KOG1094 Discoidin domain recep 99.9 3.3E-24 7.1E-29 216.5 6.3 196 446-657 579-804 (807)
107 KOG1989 ARK protein kinase fam 99.9 5.3E-24 1.1E-28 227.7 8.3 193 444-660 76-314 (738)
108 cd06650 PKc_MEK1 Catalytic dom 99.9 1.3E-23 2.7E-28 217.6 10.9 133 448-584 49-204 (333)
109 cd07848 STKc_CDKL5 Catalytic d 99.9 5.9E-24 1.3E-28 215.8 8.2 199 448-652 46-283 (287)
110 cd05036 PTKc_ALK_LTK Catalytic 99.9 1.2E-23 2.7E-28 212.2 10.4 185 448-655 55-276 (277)
111 cd05090 PTKc_Ror1 Catalytic do 99.9 1.9E-23 4.1E-28 211.6 11.7 187 447-656 52-282 (283)
112 cd05092 PTKc_TrkA Catalytic do 99.9 1.8E-23 3.9E-28 211.4 11.4 187 447-656 52-280 (280)
113 cd05107 PTKc_PDGFR_beta Cataly 99.9 1.6E-23 3.5E-28 220.6 11.5 189 448-658 86-400 (401)
114 cd05082 PTKc_Csk Catalytic dom 99.9 1.7E-23 3.7E-28 208.6 11.0 187 448-657 45-256 (256)
115 PTZ00426 cAMP-dependent protei 99.9 6.8E-24 1.5E-28 219.8 8.4 180 448-652 77-283 (340)
116 cd05056 PTKc_FAK Catalytic dom 99.9 2.8E-23 6E-28 208.9 12.4 190 447-660 52-268 (270)
117 cd05043 PTK_Ryk Pseudokinase d 99.9 2.1E-23 4.6E-28 210.9 11.5 191 447-660 53-279 (280)
118 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 3.6E-23 7.8E-28 207.6 13.0 192 447-658 47-266 (267)
119 PLN03210 Resistant to P. syrin 99.9 7E-22 1.5E-26 234.1 25.9 357 51-435 532-904 (1153)
120 cd05608 STKc_GRK1 Catalytic do 99.9 2E-23 4.3E-28 210.9 11.0 186 447-652 38-256 (280)
121 cd05097 PTKc_DDR_like Catalyti 99.9 2.6E-23 5.6E-28 211.9 11.9 194 447-656 62-295 (295)
122 cd05607 STKc_GRK7 Catalytic do 99.9 2.1E-23 4.4E-28 210.5 11.0 187 449-654 40-251 (277)
123 cd05595 STKc_PKB_beta Catalyti 99.9 1.3E-23 2.8E-28 216.6 9.7 180 448-652 41-250 (323)
124 cd05051 PTKc_DDR Catalytic dom 99.9 2E-23 4.4E-28 212.9 11.0 193 447-655 64-295 (296)
125 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 2E-23 4.4E-28 209.7 10.7 189 448-655 41-268 (269)
126 cd05099 PTKc_FGFR4 Catalytic d 99.9 3.4E-23 7.3E-28 213.0 12.6 193 448-663 63-299 (314)
127 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 3.2E-23 6.8E-28 210.1 12.1 193 447-657 51-283 (284)
128 cd06612 STKc_MST1_2 Catalytic 99.9 1.6E-23 3.5E-28 208.8 9.8 186 446-652 42-252 (256)
129 PTZ00263 protein kinase A cata 99.9 9.2E-24 2E-28 218.4 8.1 179 448-651 64-269 (329)
130 cd05069 PTKc_Yes Catalytic dom 99.9 3.9E-23 8.4E-28 206.5 12.2 186 447-656 46-259 (260)
131 cd05593 STKc_PKB_gamma Catalyt 99.9 1E-23 2.2E-28 217.8 8.0 180 448-652 41-250 (328)
132 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 4E-23 8.7E-28 206.4 12.0 185 448-656 47-259 (260)
133 cd07871 STKc_PCTAIRE3 Catalyti 99.9 3.2E-23 6.9E-28 210.3 11.3 198 448-652 49-284 (288)
134 cd05109 PTKc_HER2 Catalytic do 99.9 3.4E-23 7.4E-28 209.2 11.5 189 448-660 55-271 (279)
135 cd05110 PTKc_HER4 Catalytic do 99.9 1.6E-23 3.4E-28 214.3 8.8 190 448-661 55-272 (303)
136 cd05095 PTKc_DDR2 Catalytic do 99.9 3.8E-23 8.3E-28 210.8 11.4 194 447-656 64-296 (296)
137 cd06624 STKc_ASK Catalytic dom 99.9 3.7E-23 7.9E-28 207.7 11.0 185 447-652 50-264 (268)
138 KOG4717 Serine/threonine prote 99.9 2.8E-23 6.1E-28 206.6 9.9 182 447-652 62-269 (864)
139 cd05040 PTKc_Ack_like Catalyti 99.9 1.8E-23 3.9E-28 208.5 8.7 186 447-655 41-256 (257)
140 cd05091 PTKc_Ror2 Catalytic do 99.9 3.4E-23 7.4E-28 209.7 10.9 187 447-656 53-282 (283)
141 cd05605 STKc_GRK4_like Catalyt 99.9 4.4E-23 9.5E-28 209.0 11.5 185 448-652 46-260 (285)
142 cd05584 STKc_p70S6K Catalytic 99.9 2.2E-23 4.7E-28 215.1 9.4 180 448-652 46-255 (323)
143 cd06643 STKc_SLK Catalytic dom 99.9 1.8E-23 4E-28 211.6 8.7 185 447-652 47-261 (282)
144 cd05050 PTKc_Musk Catalytic do 99.9 1.3E-23 2.9E-28 213.3 7.8 187 447-656 53-288 (288)
145 cd05035 PTKc_Axl_like Catalyti 99.9 6.2E-23 1.3E-27 206.7 12.5 188 447-657 46-272 (273)
146 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 5.9E-23 1.3E-27 205.1 12.2 182 447-654 46-258 (259)
147 cd05039 PTKc_Csk_like Catalyti 99.9 4.2E-23 9E-28 205.8 11.0 188 447-657 45-256 (256)
148 KOG0618 Serine/threonine phosp 99.9 1.2E-25 2.6E-30 238.7 -7.8 362 52-437 22-443 (1081)
149 cd05032 PTKc_InsR_like Catalyt 99.9 4.2E-23 9E-28 208.4 11.0 186 448-656 55-277 (277)
150 PLN03210 Resistant to P. syrin 99.9 1.1E-21 2.5E-26 232.2 24.8 333 51-412 558-905 (1153)
151 cd00192 PTKc Catalytic domain 99.9 5.2E-23 1.1E-27 205.7 11.3 186 447-655 41-262 (262)
152 KOG0199 ACK and related non-re 99.9 8.8E-24 1.9E-28 217.4 5.7 186 445-654 154-369 (1039)
153 cd06615 PKc_MEK Catalytic doma 99.9 6.6E-23 1.4E-27 210.1 12.2 199 448-653 45-287 (308)
154 cd05071 PTKc_Src Catalytic dom 99.9 5.2E-23 1.1E-27 205.8 11.2 186 448-657 47-260 (262)
155 cd05600 STKc_Sid2p_Dbf2p Catal 99.9 2.5E-23 5.3E-28 215.8 8.9 189 448-653 47-257 (333)
156 cd07869 STKc_PFTAIRE1 Catalyti 99.9 5.4E-23 1.2E-27 210.4 11.2 199 449-652 50-287 (303)
157 cd05112 PTKc_Itk Catalytic dom 99.9 6.3E-23 1.4E-27 204.5 11.3 185 448-655 45-256 (256)
158 KOG0585 Ca2+/calmodulin-depend 99.9 1.2E-23 2.5E-28 208.2 5.5 182 447-652 153-371 (576)
159 cd06654 STKc_PAK1 Catalytic do 99.9 4.3E-23 9.3E-28 210.2 9.9 182 448-652 63-269 (296)
160 cd05100 PTKc_FGFR3 Catalytic d 99.9 6.8E-23 1.5E-27 212.6 11.6 190 447-659 62-295 (334)
161 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 7.2E-23 1.6E-27 207.4 11.3 191 447-654 48-267 (284)
162 cd06611 STKc_SLK_like Catalyti 99.9 2.4E-23 5.2E-28 210.5 7.8 186 447-653 47-262 (280)
163 cd05075 PTKc_Axl Catalytic dom 99.9 3.4E-23 7.3E-28 208.5 8.7 188 447-657 45-271 (272)
164 cd05619 STKc_nPKC_theta Cataly 99.9 5.9E-23 1.3E-27 210.9 10.6 177 450-651 43-246 (316)
165 cd05057 PTKc_EGFR_like Catalyt 99.9 3.7E-23 7.9E-28 209.0 8.9 190 447-660 54-271 (279)
166 PHA03212 serine/threonine kina 99.9 1E-22 2.2E-27 214.5 12.6 199 448-652 129-375 (391)
167 cd06642 STKc_STK25-YSK1 Cataly 99.9 8.2E-23 1.8E-27 206.2 11.1 181 447-652 47-252 (277)
168 PLN00034 mitogen-activated pro 99.9 8.3E-23 1.8E-27 213.5 11.5 181 447-652 117-327 (353)
169 cd08219 STKc_Nek3 Catalytic do 99.9 4.4E-23 9.6E-28 205.5 8.9 183 448-653 44-252 (255)
170 cd05588 STKc_aPKC Catalytic do 99.9 5.9E-23 1.3E-27 212.3 10.1 179 449-646 42-249 (329)
171 cd05590 STKc_nPKC_eta Catalyti 99.9 4E-23 8.7E-28 212.7 8.8 174 449-647 42-241 (320)
172 KOG0616 cAMP-dependent protein 99.9 2.7E-23 5.8E-28 194.0 6.6 172 448-644 90-283 (355)
173 cd07859 STKc_TDY_MAPK_plant Ca 99.9 7.7E-23 1.7E-27 212.8 10.8 195 448-652 45-289 (338)
174 cd06613 STKc_MAP4K3_like Catal 99.9 1E-22 2.2E-27 203.7 11.2 187 447-652 45-259 (262)
175 cd05086 PTKc_Aatyk2 Catalytic 99.9 2E-22 4.4E-27 202.2 13.4 190 447-655 40-267 (268)
176 cd05582 STKc_RSK_N N-terminal 99.9 1.6E-23 3.4E-28 215.8 5.3 176 449-649 45-245 (318)
177 cd05589 STKc_PKN Catalytic dom 99.9 8.2E-23 1.8E-27 210.9 10.6 167 455-647 55-246 (324)
178 cd05618 STKc_aPKC_iota Catalyt 99.9 7.1E-23 1.5E-27 211.6 10.1 180 449-647 42-250 (329)
179 cd05073 PTKc_Hck Catalytic dom 99.9 1.4E-22 3.1E-27 202.4 12.0 186 447-656 46-259 (260)
180 cd05594 STKc_PKB_alpha Catalyt 99.9 2.2E-23 4.8E-28 215.3 6.2 181 448-652 41-251 (325)
181 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 9.2E-23 2E-27 206.7 10.6 194 446-657 50-283 (284)
182 cd05046 PTK_CCK4 Pseudokinase 99.9 5E-23 1.1E-27 207.6 8.5 187 447-655 53-274 (275)
183 cd05041 PTKc_Fes_like Catalyti 99.9 6.3E-23 1.4E-27 203.9 9.1 186 447-655 37-250 (251)
184 cd08216 PK_STRAD Pseudokinase 99.9 1.7E-22 3.8E-27 207.8 12.7 200 447-652 44-294 (314)
185 cd05042 PTKc_Aatyk Catalytic d 99.9 1.6E-22 3.5E-27 203.2 12.0 189 448-655 41-268 (269)
186 KOG0597 Serine-threonine prote 99.9 4.7E-23 1E-27 207.6 8.0 180 447-652 46-250 (808)
187 cd05067 PTKc_Lck_Blk Catalytic 99.9 1.8E-22 3.9E-27 201.8 11.9 186 447-656 46-259 (260)
188 cd06644 STKc_STK10_LOK Catalyt 99.9 8.3E-23 1.8E-27 207.9 9.6 185 447-652 54-268 (292)
189 cd05570 STKc_PKC Catalytic dom 99.9 1E-22 2.2E-27 209.6 10.3 179 449-652 42-251 (318)
190 cd07862 STKc_CDK6 Catalytic do 99.9 2E-22 4.3E-27 204.9 11.9 194 451-652 50-286 (290)
191 cd05061 PTKc_InsR Catalytic do 99.9 1.4E-22 3E-27 205.7 10.6 188 448-658 55-279 (288)
192 cd06646 STKc_MAP4K5 Catalytic 99.9 6.7E-23 1.5E-27 205.7 8.2 186 448-653 52-265 (267)
193 cd08221 STKc_Nek9 Catalytic do 99.9 1.1E-22 2.3E-27 202.8 9.5 184 447-653 44-253 (256)
194 KOG0200 Fibroblast/platelet-de 99.9 1.2E-22 2.7E-27 224.0 10.8 191 446-658 345-580 (609)
195 KOG0659 Cdk activating kinase 99.9 1.6E-22 3.5E-27 186.0 9.7 198 449-653 48-281 (318)
196 cd06658 STKc_PAK5 Catalytic do 99.9 1.5E-22 3.2E-27 205.8 10.6 184 447-653 64-272 (292)
197 PHA03207 serine/threonine kina 99.9 1.8E-22 3.9E-27 213.7 11.6 199 449-653 133-375 (392)
198 cd06625 STKc_MEKK3_like Cataly 99.9 9.8E-23 2.1E-27 204.0 9.2 183 447-652 49-259 (263)
199 KOG0605 NDR and related serine 99.9 4.2E-23 9.2E-28 208.0 6.4 176 447-646 186-435 (550)
200 cd05592 STKc_nPKC_theta_delta 99.9 1.2E-22 2.7E-27 208.7 10.1 173 452-649 45-243 (316)
201 PRK13184 pknD serine/threonine 99.9 8.9E-23 1.9E-27 226.9 9.6 192 447-659 47-292 (932)
202 cd05620 STKc_nPKC_delta Cataly 99.9 1.2E-22 2.5E-27 208.9 9.7 177 450-651 43-246 (316)
203 cd08220 STKc_Nek8 Catalytic do 99.9 2.4E-22 5.3E-27 200.2 11.8 183 447-652 44-252 (256)
204 cd06655 STKc_PAK2 Catalytic do 99.9 9.1E-23 2E-27 207.7 8.6 182 448-652 62-268 (296)
205 KOG1025 Epidermal growth facto 99.9 2.7E-23 5.9E-28 217.4 4.7 188 446-657 742-957 (1177)
206 cd05103 PTKc_VEGFR2 Catalytic 99.9 3.3E-22 7.1E-27 208.0 12.8 190 448-659 56-341 (343)
207 cd05034 PTKc_Src_like Catalyti 99.9 2E-22 4.2E-27 201.6 10.7 187 447-656 46-260 (261)
208 cd05083 PTKc_Chk Catalytic dom 99.9 2.7E-22 5.9E-27 199.7 11.6 186 447-656 44-253 (254)
209 KOG0600 Cdc2-related protein k 99.9 1.8E-22 3.9E-27 201.6 10.1 195 449-652 163-399 (560)
210 cd05591 STKc_nPKC_epsilon Cata 99.9 1E-22 2.3E-27 209.9 8.9 179 449-652 42-253 (321)
211 cd06640 STKc_MST4 Catalytic do 99.9 2.1E-22 4.5E-27 203.3 10.9 182 447-653 47-253 (277)
212 cd08223 STKc_Nek4 Catalytic do 99.9 1.7E-22 3.7E-27 201.5 10.1 182 448-652 45-253 (257)
213 PHA03211 serine/threonine kina 99.9 3.4E-22 7.3E-27 213.1 12.9 200 448-652 206-454 (461)
214 cd06605 PKc_MAPKK Catalytic do 99.9 3E-22 6.4E-27 200.8 11.7 190 447-652 44-256 (265)
215 PTZ00036 glycogen synthase kin 99.9 1.7E-22 3.6E-27 216.4 10.5 197 450-652 107-350 (440)
216 cd05617 STKc_aPKC_zeta Catalyt 99.9 1.4E-22 2.9E-27 209.4 9.4 182 448-648 41-249 (327)
217 cd07839 STKc_CDK5 Catalytic do 99.9 2.7E-22 5.9E-27 203.3 11.2 199 448-652 45-280 (284)
218 cd08528 STKc_Nek10 Catalytic d 99.9 6.5E-22 1.4E-26 198.8 13.9 187 448-655 54-268 (269)
219 cd06609 STKc_MST3_like Catalyt 99.9 3E-22 6.6E-27 201.8 11.4 181 448-652 45-250 (274)
220 cd08226 PK_STRAD_beta Pseudoki 99.9 2.9E-22 6.3E-27 207.3 11.5 209 447-660 44-317 (328)
221 PHA03390 pk1 serine/threonine- 99.9 3.9E-22 8.4E-27 199.9 12.0 172 460-652 67-261 (267)
222 cd06645 STKc_MAP4K3 Catalytic 99.9 1.9E-22 4.1E-27 202.4 9.7 185 448-652 52-264 (267)
223 PHA03209 serine/threonine kina 99.9 3.5E-22 7.7E-27 208.8 11.9 128 450-582 105-256 (357)
224 cd06607 STKc_TAO Catalytic dom 99.9 3.4E-22 7.5E-27 204.8 11.6 183 447-652 60-266 (307)
225 PTZ00266 NIMA-related protein 99.9 1.3E-22 2.8E-27 226.6 9.0 192 447-657 57-301 (1021)
226 cd06614 STKc_PAK Catalytic dom 99.9 1.7E-22 3.6E-27 205.0 9.1 185 447-652 60-269 (286)
227 PTZ00283 serine/threonine prot 99.9 3.4E-22 7.4E-27 216.6 12.0 182 448-652 77-296 (496)
228 cd06637 STKc_TNIK Catalytic do 99.9 1.6E-22 3.5E-27 203.5 8.7 183 448-652 48-268 (272)
229 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 8.2E-22 1.8E-26 200.0 13.9 191 447-652 44-265 (287)
230 cd08218 STKc_Nek1 Catalytic do 99.9 3.8E-22 8.2E-27 198.9 11.2 182 448-652 45-252 (256)
231 cd06619 PKc_MKK5 Catalytic dom 99.9 4.9E-22 1.1E-26 200.7 11.9 185 447-653 44-253 (279)
232 cd05626 STKc_LATS2 Catalytic d 99.9 1.2E-22 2.7E-27 214.3 7.8 185 447-652 46-304 (381)
233 cd05573 STKc_ROCK_NDR_like Cat 99.9 8.6E-23 1.9E-27 213.5 6.5 183 448-652 47-284 (350)
234 cd06631 STKc_YSK4 Catalytic do 99.9 3.3E-22 7.2E-27 200.4 10.5 184 447-652 47-261 (265)
235 cd05596 STKc_ROCK Catalytic do 99.9 1.2E-22 2.6E-27 213.2 7.5 183 448-652 89-303 (370)
236 cd08225 STKc_Nek5 Catalytic do 99.9 4.2E-22 9.1E-27 198.7 11.0 182 448-652 45-253 (257)
237 cd06628 STKc_MAPKKK_Byr2_like 99.9 3.6E-22 7.8E-27 200.4 10.5 182 447-652 51-263 (267)
238 cd05575 STKc_SGK Catalytic dom 99.9 1.7E-22 3.6E-27 208.6 8.3 169 455-648 49-242 (323)
239 cd05601 STKc_CRIK Catalytic do 99.9 4.5E-23 9.8E-28 213.6 4.0 184 448-652 47-262 (330)
240 cd05632 STKc_GRK5 Catalytic do 99.9 4.7E-22 1E-26 201.4 11.3 180 449-648 47-251 (285)
241 cd07873 STKc_PCTAIRE1 Catalyti 99.9 5.1E-22 1.1E-26 203.0 11.6 196 449-652 51-285 (301)
242 cd05614 STKc_MSK2_N N-terminal 99.9 2.3E-22 5.1E-27 208.5 9.2 184 448-652 50-266 (332)
243 cd06656 STKc_PAK3 Catalytic do 99.9 2.8E-22 6E-27 204.3 9.6 182 448-652 62-268 (297)
244 cd05602 STKc_SGK1 Catalytic do 99.9 2.1E-22 4.5E-27 208.1 8.6 174 455-653 49-247 (325)
245 cd05630 STKc_GRK6 Catalytic do 99.9 6.1E-22 1.3E-26 200.5 11.9 184 449-652 47-260 (285)
246 cd06647 STKc_PAK_I Catalytic d 99.9 4.2E-22 9E-27 202.6 10.6 183 448-653 62-269 (293)
247 cd07872 STKc_PCTAIRE2 Catalyti 99.9 6.1E-22 1.3E-26 203.2 11.7 204 448-658 50-293 (309)
248 cd05604 STKc_SGK3 Catalytic do 99.9 1.3E-22 2.8E-27 209.6 6.4 174 455-653 49-247 (325)
249 KOG0032 Ca2+/calmodulin-depend 99.9 3.8E-22 8.2E-27 205.2 9.8 184 447-652 80-292 (382)
250 cd06638 STKc_myosinIIIA Cataly 99.9 4E-22 8.6E-27 202.3 9.9 185 448-653 60-283 (286)
251 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 8.4E-22 1.8E-26 199.9 12.2 187 447-652 44-261 (286)
252 cd05587 STKc_cPKC Catalytic do 99.9 2.7E-22 5.8E-27 207.1 8.7 175 448-647 46-246 (324)
253 cd05599 STKc_NDR_like Catalyti 99.9 1.1E-22 2.4E-27 213.7 5.8 183 448-652 47-295 (364)
254 cd06629 STKc_MAPKKK_Bck1_like 99.9 7.7E-22 1.7E-26 198.6 11.6 186 448-652 54-268 (272)
255 cd05603 STKc_SGK2 Catalytic do 99.9 2.8E-22 6E-27 206.8 8.4 169 455-648 49-242 (321)
256 cd06648 STKc_PAK_II Catalytic 99.9 6.8E-22 1.5E-26 200.3 11.0 182 448-652 62-268 (285)
257 cd06635 STKc_TAO1 Catalytic do 99.9 8E-22 1.7E-26 203.0 11.5 183 448-653 71-277 (317)
258 cd07847 STKc_CDKL1_4 Catalytic 99.9 8.5E-22 1.8E-26 199.8 11.4 199 448-652 46-282 (286)
259 cd06659 STKc_PAK6 Catalytic do 99.9 6.3E-22 1.4E-26 201.7 10.5 183 448-653 64-271 (297)
260 KOG0694 Serine/threonine prote 99.9 1.5E-22 3.3E-27 209.8 5.9 174 448-647 414-613 (694)
261 cd08217 STKc_Nek2 Catalytic do 99.9 7.9E-22 1.7E-26 197.5 11.0 186 448-652 45-261 (265)
262 cd05628 STKc_NDR1 Catalytic do 99.9 2.5E-22 5.5E-27 210.6 7.7 132 448-584 47-238 (363)
263 cd06608 STKc_myosinIII_like Ca 99.9 3.6E-22 7.8E-27 201.2 8.5 185 447-652 47-271 (275)
264 cd06639 STKc_myosinIIIB Cataly 99.9 4.9E-22 1.1E-26 202.1 9.4 183 449-652 65-286 (291)
265 cd07861 STKc_CDK1_euk Catalyti 99.9 6.4E-22 1.4E-26 200.6 10.2 197 448-652 45-281 (285)
266 cd05616 STKc_cPKC_beta Catalyt 99.9 6.1E-22 1.3E-26 204.4 10.1 173 450-647 48-246 (323)
267 KOG4237 Extracellular matrix p 99.9 1.5E-23 3.3E-28 202.7 -1.7 257 51-307 67-337 (498)
268 cd07860 STKc_CDK2_3 Catalytic 99.9 6E-22 1.3E-26 200.7 9.9 197 448-652 45-280 (284)
269 cd05629 STKc_NDR_like_fungal C 99.9 1.8E-22 3.8E-27 213.1 6.0 183 448-652 47-304 (377)
270 cd05609 STKc_MAST Catalytic do 99.9 4E-22 8.7E-27 204.1 8.0 187 448-656 47-273 (305)
271 cd05598 STKc_LATS Catalytic do 99.9 1.3E-22 2.9E-27 214.0 4.5 183 448-652 47-300 (376)
272 cd06651 STKc_MEKK3 Catalytic d 99.9 7.6E-22 1.7E-26 197.9 9.6 181 448-652 50-260 (266)
273 cd06630 STKc_MEKK1 Catalytic d 99.9 1.6E-21 3.5E-26 195.7 11.9 186 447-652 48-263 (268)
274 cd05625 STKc_LATS1 Catalytic d 99.9 2.4E-22 5.3E-27 212.4 6.2 133 447-584 46-250 (382)
275 cd06632 STKc_MEKK1_plant Catal 99.9 8.7E-22 1.9E-26 196.5 9.8 183 447-652 47-254 (258)
276 cd07846 STKc_CDKL2_3 Catalytic 99.9 8.5E-22 1.8E-26 199.8 9.8 199 448-652 46-282 (286)
277 KOG0604 MAP kinase-activated p 99.9 9.8E-22 2.1E-26 183.6 9.0 186 451-652 103-321 (400)
278 cd07832 STKc_CCRK Catalytic do 99.9 1.7E-21 3.8E-26 197.5 11.7 197 448-652 45-281 (286)
279 KOG0611 Predicted serine/threo 99.9 8.2E-22 1.8E-26 190.9 8.6 180 447-652 98-302 (668)
280 smart00219 TyrKc Tyrosine kina 99.9 1.4E-21 3.1E-26 194.9 10.7 185 447-654 46-258 (258)
281 cd07853 STKc_NLK Catalytic dom 99.9 1E-21 2.2E-26 206.8 10.1 198 447-652 44-287 (372)
282 cd06610 STKc_OSR1_SPAK Catalyt 99.9 8.6E-22 1.9E-26 197.6 9.1 188 447-652 44-263 (267)
283 KOG3653 Transforming growth fa 99.9 9.8E-22 2.1E-26 194.8 9.2 202 445-659 245-505 (534)
284 cd05621 STKc_ROCK2 Catalytic d 99.9 5.1E-22 1.1E-26 208.1 7.5 183 448-652 89-303 (370)
285 cd07841 STKc_CDK7 Catalytic do 99.9 1.7E-21 3.6E-26 198.9 10.8 199 448-652 48-281 (298)
286 cd06623 PKc_MAPKK_plant_like C 99.9 2.1E-21 4.5E-26 194.5 11.2 186 447-653 44-256 (264)
287 cd06626 STKc_MEKK4 Catalytic d 99.9 1.5E-21 3.3E-26 195.5 10.1 186 446-652 43-260 (264)
288 cd06634 STKc_TAO2 Catalytic do 99.9 1.7E-21 3.6E-26 199.7 10.6 183 448-653 61-267 (308)
289 cd07831 STKc_MOK Catalytic dom 99.9 2.9E-21 6.3E-26 195.5 12.2 194 451-652 46-278 (282)
290 cd07835 STKc_CDK1_like Catalyt 99.9 1.2E-21 2.6E-26 198.4 9.3 198 448-652 44-279 (283)
291 KOG0660 Mitogen-activated prot 99.9 5E-22 1.1E-26 191.5 6.1 196 448-652 67-309 (359)
292 cd05572 STKc_cGK_PKG Catalytic 99.9 1.7E-21 3.6E-26 195.0 10.1 179 447-646 38-240 (262)
293 smart00750 KIND kinase non-cat 99.9 8.6E-21 1.9E-25 177.4 14.3 162 487-660 1-172 (176)
294 cd05074 PTKc_Tyro3 Catalytic d 99.9 2.2E-21 4.8E-26 195.3 10.9 188 447-657 46-272 (273)
295 cd06641 STKc_MST3 Catalytic do 99.8 2.8E-21 6E-26 195.1 11.5 182 447-653 47-253 (277)
296 cd05622 STKc_ROCK1 Catalytic d 99.8 7.6E-22 1.6E-26 207.1 7.6 183 448-652 89-303 (371)
297 cd06636 STKc_MAP4K4_6 Catalyti 99.8 2.2E-21 4.8E-26 196.3 10.8 183 448-652 58-278 (282)
298 KOG2052 Activin A type IB rece 99.8 3.7E-21 8E-26 189.3 11.8 205 445-659 246-505 (513)
299 cd07868 STKc_CDK8 Catalytic do 99.8 1.8E-21 3.8E-26 200.6 9.9 131 449-584 45-218 (317)
300 cd05615 STKc_cPKC_alpha Cataly 99.8 1.7E-21 3.8E-26 200.8 9.8 174 449-647 47-246 (323)
301 cd06917 STKc_NAK1_like Catalyt 99.8 1.8E-21 4E-26 196.4 9.7 181 448-652 45-254 (277)
302 cd05633 STKc_GRK3 Catalytic do 99.8 3.6E-21 7.7E-26 194.3 11.7 173 458-652 53-254 (279)
303 cd07876 STKc_JNK2 Catalytic do 99.8 2.3E-21 5E-26 203.2 10.6 129 448-584 66-224 (359)
304 cd07870 STKc_PFTAIRE2 Catalyti 99.8 3.4E-21 7.4E-26 195.9 11.5 199 449-652 50-287 (291)
305 cd07833 STKc_CDKL Catalytic do 99.8 4E-21 8.7E-26 195.1 12.0 199 447-652 45-284 (288)
306 cd05586 STKc_Sck1_like Catalyt 99.8 8.5E-22 1.8E-26 204.0 7.0 173 452-648 43-244 (330)
307 cd06657 STKc_PAK4 Catalytic do 99.8 3.3E-21 7.2E-26 195.8 10.8 182 448-652 63-269 (292)
308 cd07844 STKc_PCTAIRE_like Cata 99.8 4.9E-21 1.1E-25 194.8 12.1 199 449-652 50-287 (291)
309 cd08222 STKc_Nek11 Catalytic d 99.8 4E-21 8.8E-26 191.9 11.2 181 449-652 49-256 (260)
310 cd06633 STKc_TAO3 Catalytic do 99.8 3.9E-21 8.6E-26 197.4 11.3 183 447-652 66-272 (313)
311 cd05623 STKc_MRCK_alpha Cataly 99.8 3.2E-21 6.8E-26 199.8 10.6 187 448-653 47-266 (332)
312 KOG0658 Glycogen synthase kina 99.8 9.6E-22 2.1E-26 189.9 6.2 198 449-652 64-305 (364)
313 cd05597 STKc_DMPK_like Catalyt 99.8 3.8E-21 8.2E-26 199.0 11.0 133 448-584 47-210 (331)
314 cd05118 STKc_CMGC Catalytic do 99.8 6.9E-21 1.5E-25 192.8 12.7 198 448-652 44-279 (283)
315 cd07874 STKc_JNK3 Catalytic do 99.8 2.8E-21 6.1E-26 202.3 10.0 196 448-652 62-310 (355)
316 cd07863 STKc_CDK4 Catalytic do 99.8 3.1E-21 6.8E-26 195.9 10.1 194 451-652 48-284 (288)
317 cd05627 STKc_NDR2 Catalytic do 99.8 5E-22 1.1E-26 208.2 4.3 132 448-584 47-238 (360)
318 cd07875 STKc_JNK1 Catalytic do 99.8 3.8E-21 8.3E-26 201.9 10.8 194 448-652 69-317 (364)
319 cd05122 PKc_STE Catalytic doma 99.8 2.4E-21 5.2E-26 192.4 8.8 185 447-652 42-250 (253)
320 cd05574 STKc_phototropin_like 99.8 1.6E-21 3.6E-26 200.7 7.8 184 447-652 46-288 (316)
321 KOG0607 MAP kinase-interacting 99.8 6.6E-22 1.4E-26 186.2 4.3 190 448-652 121-360 (463)
322 PTZ00284 protein kinase; Provi 99.8 3.5E-21 7.6E-26 208.7 10.7 196 450-652 173-437 (467)
323 cd05578 STKc_Yank1 Catalytic d 99.8 4.3E-21 9.3E-26 191.5 10.3 183 447-651 45-253 (258)
324 cd07843 STKc_CDC2L1 Catalytic 99.8 5.7E-21 1.2E-25 194.5 11.3 198 448-652 50-289 (293)
325 KOG0983 Mitogen-activated prot 99.8 1E-21 2.2E-26 181.1 5.1 180 453-652 141-348 (391)
326 cd07867 STKc_CDC2L6 Catalytic 99.8 9.5E-21 2.1E-25 195.2 12.9 132 448-584 44-218 (317)
327 KOG0195 Integrin-linked kinase 99.8 1.8E-21 3.9E-26 179.2 6.5 192 446-658 231-447 (448)
328 cd06652 STKc_MEKK2 Catalytic d 99.8 6.2E-21 1.3E-25 191.2 11.0 182 447-652 49-260 (265)
329 cd05611 STKc_Rim15_like Cataly 99.8 6E-21 1.3E-25 190.7 10.7 178 457-655 52-250 (260)
330 cd05577 STKc_GRK Catalytic dom 99.8 7.6E-21 1.7E-25 191.8 11.5 182 448-649 39-245 (277)
331 cd05606 STKc_beta_ARK Catalyti 99.8 1.1E-20 2.4E-25 190.7 12.3 175 456-652 51-254 (278)
332 cd06616 PKc_MKK4 Catalytic dom 99.8 3.4E-21 7.4E-26 195.6 8.5 187 448-652 48-266 (288)
333 cd05624 STKc_MRCK_beta Catalyt 99.8 6.6E-21 1.4E-25 197.2 10.6 186 448-652 47-265 (331)
334 cd07878 STKc_p38beta_MAPK11 Ca 99.8 6.3E-21 1.4E-25 198.7 10.4 196 448-652 60-297 (343)
335 cd06617 PKc_MKK3_6 Catalytic d 99.8 8.3E-21 1.8E-25 192.2 10.9 176 456-652 54-260 (283)
336 cd05580 STKc_PKA Catalytic dom 99.8 7.1E-21 1.5E-25 193.4 10.3 179 448-651 47-252 (290)
337 cd08530 STKc_CNK2-like Catalyt 99.8 1E-20 2.2E-25 188.5 11.1 182 448-652 45-252 (256)
338 cd05576 STKc_RPK118_like Catal 99.8 5.2E-21 1.1E-25 188.1 8.9 170 452-650 35-226 (237)
339 KOG1024 Receptor-like protein 99.8 3.1E-21 6.8E-26 186.3 6.5 190 449-661 334-559 (563)
340 KOG0663 Protein kinase PITSLRE 99.8 9.4E-21 2E-25 179.8 9.5 196 449-652 122-360 (419)
341 cd05579 STKc_MAST_like Catalyt 99.8 2.5E-21 5.4E-26 193.9 6.1 186 447-655 38-256 (265)
342 cd07836 STKc_Pho85 Catalytic d 99.8 1.5E-20 3.2E-25 190.5 11.7 197 448-652 44-280 (284)
343 cd07865 STKc_CDK9 Catalytic do 99.8 1.4E-20 3.1E-25 193.2 11.6 199 449-652 58-306 (310)
344 PF00069 Pkinase: Protein kina 99.8 3.5E-21 7.5E-26 192.4 6.7 184 451-652 47-256 (260)
345 cd07840 STKc_CDK9_like Catalyt 99.8 1.7E-20 3.6E-25 190.4 11.4 198 448-652 44-283 (287)
346 cd06618 PKc_MKK7 Catalytic dom 99.8 1E-20 2.2E-25 192.9 9.8 184 450-653 61-273 (296)
347 cd07830 STKc_MAK_like Catalyti 99.8 1.7E-20 3.7E-25 190.0 11.4 194 451-652 46-279 (283)
348 PRK15387 E3 ubiquitin-protein 99.8 8.8E-20 1.9E-24 200.8 17.7 262 78-396 204-465 (788)
349 cd06606 STKc_MAPKKK Catalytic 99.8 1.8E-20 3.9E-25 186.9 11.3 184 447-652 44-256 (260)
350 PLN00009 cyclin-dependent kina 99.8 1.9E-20 4.2E-25 190.7 11.0 198 448-652 47-283 (294)
351 cd08215 STKc_Nek Catalytic dom 99.8 2.1E-20 4.6E-25 186.3 10.6 182 448-652 45-254 (258)
352 KOG0587 Traf2- and Nck-interac 99.8 1.1E-20 2.4E-25 200.4 8.5 185 447-652 60-281 (953)
353 cd07855 STKc_ERK5 Catalytic do 99.8 2.6E-20 5.6E-25 193.3 10.7 197 448-652 50-293 (334)
354 cd07845 STKc_CDK10 Catalytic d 99.8 3.4E-20 7.4E-25 190.3 11.4 197 449-652 53-289 (309)
355 cd07838 STKc_CDK4_6_like Catal 99.8 3.9E-20 8.5E-25 187.7 11.7 196 449-652 45-283 (287)
356 PRK15370 E3 ubiquitin-protein 99.8 1E-19 2.2E-24 201.7 15.8 270 7-306 61-381 (754)
357 PRK15387 E3 ubiquitin-protein 99.8 1.7E-19 3.7E-24 198.5 17.4 265 53-374 203-467 (788)
358 cd07849 STKc_ERK1_2_like Catal 99.8 2.8E-20 6.1E-25 193.1 10.8 197 448-653 49-292 (336)
359 cd05583 STKc_MSK_N N-terminal 99.8 3E-20 6.6E-25 188.6 10.6 189 448-657 50-267 (288)
360 cd07852 STKc_MAPK15 Catalytic 99.8 4.2E-20 9.2E-25 192.0 11.6 196 448-653 52-295 (337)
361 cd06627 STKc_Cdc7_like Catalyt 99.8 3.7E-20 7.9E-25 184.2 10.5 182 447-652 44-250 (254)
362 cd07837 STKc_CdkB_plant Cataly 99.8 2.3E-20 5E-25 190.2 9.2 198 448-652 46-290 (295)
363 cd07864 STKc_CDK12 Catalytic d 99.8 6E-20 1.3E-24 187.9 12.1 199 448-652 52-298 (302)
364 cd07834 STKc_MAPK Catalytic do 99.8 4E-20 8.8E-25 191.6 11.0 206 447-660 44-298 (330)
365 PHA03210 serine/threonine kina 99.8 4.6E-20 1E-24 200.6 11.8 200 448-652 209-453 (501)
366 cd07829 STKc_CDK_like Catalyti 99.8 5.6E-20 1.2E-24 186.0 11.4 197 448-652 44-278 (282)
367 cd07842 STKc_CDK8_like Catalyt 99.8 5.5E-20 1.2E-24 189.4 11.0 200 448-652 48-312 (316)
368 KOG0603 Ribosomal protein S6 k 99.8 4.1E-20 8.8E-25 190.8 9.3 177 449-652 362-562 (612)
369 cd07850 STKc_JNK Catalytic dom 99.8 8.8E-20 1.9E-24 190.8 11.8 195 448-652 61-310 (353)
370 cd06653 STKc_MEKK3_like_1 Cata 99.8 8.2E-20 1.8E-24 182.9 10.9 182 447-652 49-260 (264)
371 cd07866 STKc_BUR1 Catalytic do 99.8 7.8E-20 1.7E-24 187.9 10.4 197 448-652 53-307 (311)
372 PTZ00024 cyclin-dependent prot 99.8 1.2E-19 2.6E-24 188.4 11.4 197 448-652 66-312 (335)
373 cd07858 STKc_TEY_MAPK_plant Ca 99.8 1.5E-19 3.3E-24 187.7 11.9 202 448-657 50-297 (337)
374 cd07851 STKc_p38 Catalytic dom 99.8 7.5E-20 1.6E-24 190.4 9.4 196 448-652 60-297 (343)
375 KOG0586 Serine/threonine prote 99.8 3.4E-20 7.5E-25 190.3 6.6 180 448-652 101-305 (596)
376 KOG0594 Protein kinase PCTAIRE 99.8 1.6E-19 3.5E-24 175.0 10.8 202 450-657 58-308 (323)
377 cd07856 STKc_Sty1_Hog1 Catalyt 99.8 1E-19 2.3E-24 187.9 10.2 199 447-653 54-288 (328)
378 PHA02882 putative serine/threo 99.8 1.1E-19 2.4E-24 184.9 9.9 183 454-654 75-293 (294)
379 cd05613 STKc_MSK1_N N-terminal 99.8 1.5E-19 3.4E-24 183.6 11.0 184 448-652 50-267 (290)
380 cd05123 STKc_AGC Catalytic dom 99.8 8.1E-20 1.8E-24 181.3 8.7 177 448-649 39-240 (250)
381 KOG4237 Extracellular matrix p 99.8 2.2E-21 4.8E-26 187.9 -3.0 293 56-364 51-358 (498)
382 cd07879 STKc_p38delta_MAPK13 C 99.8 1.5E-19 3.2E-24 188.1 10.3 200 448-658 60-304 (342)
383 PRK15370 E3 ubiquitin-protein 99.8 1.9E-19 4E-24 199.6 11.5 251 51-337 178-428 (754)
384 PLN00181 protein SPA1-RELATED; 99.8 1.1E-19 2.3E-24 209.2 9.6 170 457-652 27-264 (793)
385 smart00220 S_TKc Serine/Threon 99.8 1.4E-19 3E-24 178.5 8.4 185 447-652 32-240 (244)
386 KOG4250 TANK binding protein k 99.8 4.2E-19 9.1E-24 184.9 11.4 133 448-584 57-226 (732)
387 cd05581 STKc_PDK1 Catalytic do 99.8 2E-19 4.4E-24 181.7 9.0 181 447-652 46-276 (280)
388 KOG0667 Dual-specificity tyros 99.8 2.7E-19 5.8E-24 185.8 9.8 129 451-584 231-390 (586)
389 cd07854 STKc_MAPK4_6 Catalytic 99.8 2.3E-19 5.1E-24 186.6 9.2 197 447-652 47-299 (342)
390 KOG0614 cGMP-dependent protein 99.8 7.3E-20 1.6E-24 182.4 4.3 176 448-646 466-665 (732)
391 cd07877 STKc_p38alpha_MAPK14 C 99.8 6.2E-19 1.4E-23 183.6 11.2 197 448-652 62-299 (345)
392 cd07857 STKc_MPK1 Catalytic do 99.8 4.8E-19 1E-23 183.6 9.8 197 448-652 47-291 (332)
393 cd07880 STKc_p38gamma_MAPK12 C 99.8 7.3E-19 1.6E-23 182.9 10.8 197 448-652 60-297 (343)
394 KOG0986 G protein-coupled rece 99.8 2.3E-19 5.1E-24 176.8 5.7 179 450-648 233-436 (591)
395 KOG1006 Mitogen-activated prot 99.8 2.9E-20 6.3E-25 171.0 -1.5 180 456-652 117-326 (361)
396 KOG0696 Serine/threonine prote 99.8 8.5E-19 1.8E-23 170.5 7.8 162 460-646 408-594 (683)
397 KOG0690 Serine/threonine prote 99.7 4.6E-19 1E-23 167.4 4.0 170 451-645 217-411 (516)
398 KOG0617 Ras suppressor protein 99.7 2E-20 4.4E-25 160.8 -4.9 164 71-240 29-193 (264)
399 cd05610 STKc_MASTL Catalytic d 99.7 1.7E-18 3.7E-23 194.3 7.9 82 448-534 50-131 (669)
400 KOG0612 Rho-associated, coiled 99.7 1.2E-18 2.5E-23 189.5 5.6 182 448-651 121-336 (1317)
401 KOG1151 Tousled-like protein k 99.7 1.9E-18 4.1E-23 169.5 6.5 186 450-652 515-740 (775)
402 KOG0576 Mitogen-activated prot 99.7 9.4E-19 2E-23 180.2 4.2 187 446-652 56-270 (829)
403 KOG0617 Ras suppressor protein 99.7 4.5E-20 9.8E-25 158.7 -5.1 163 51-219 33-196 (264)
404 KOG0984 Mitogen-activated prot 99.7 2.9E-18 6.3E-23 152.2 5.4 140 456-599 99-269 (282)
405 cd00116 LRR_RI Leucine-rich re 99.7 2.6E-19 5.7E-24 184.6 -2.5 177 56-232 3-206 (319)
406 KOG0671 LAMMER dual specificit 99.7 9.4E-18 2E-22 162.7 7.6 196 452-652 135-405 (415)
407 KOG0695 Serine/threonine prote 99.7 1.3E-17 2.8E-22 158.2 7.7 129 452-585 300-454 (593)
408 KOG0665 Jun-N-terminal kinase 99.7 1.2E-17 2.6E-22 158.2 6.6 192 447-652 60-309 (369)
409 cd00116 LRR_RI Leucine-rich re 99.7 1.2E-18 2.7E-23 179.6 -1.3 202 79-281 2-234 (319)
410 KOG1027 Serine/threonine prote 99.7 4.9E-18 1.1E-22 179.6 2.9 178 451-652 551-766 (903)
411 PLN03225 Serine/threonine-prot 99.7 8.3E-17 1.8E-21 176.2 11.1 169 472-652 205-449 (566)
412 KOG4236 Serine/threonine prote 99.7 7.2E-18 1.6E-22 168.8 1.5 183 448-652 609-818 (888)
413 KOG1035 eIF-2alpha kinase GCN2 99.7 4.3E-17 9.4E-22 178.9 7.2 158 473-652 667-870 (1351)
414 KOG0608 Warts/lats-like serine 99.7 1.1E-16 2.4E-21 163.8 9.3 136 448-588 675-877 (1034)
415 KOG0666 Cyclin C-dependent kin 99.7 7.2E-17 1.6E-21 152.0 5.7 130 449-583 74-241 (438)
416 PLN03224 probable serine/threo 99.6 3.1E-16 6.8E-21 167.1 9.1 186 449-652 219-499 (507)
417 KOG1023 Natriuretic peptide re 99.6 6.7E-16 1.4E-20 160.2 10.7 189 456-658 1-225 (484)
418 KOG0669 Cyclin T-dependent kin 99.6 3.5E-16 7.7E-21 143.1 7.5 195 451-652 65-314 (376)
419 PLN03150 hypothetical protein; 99.6 1.1E-15 2.3E-20 169.4 12.4 148 6-158 369-526 (623)
420 KOG0668 Casein kinase II, alph 99.6 4.7E-16 1E-20 140.3 6.5 198 447-652 77-321 (338)
421 cd00180 PKc Catalytic domain o 99.6 3.7E-15 8E-20 143.2 9.6 152 447-653 36-214 (215)
422 KOG1152 Signal transduction se 99.5 3.1E-15 6.6E-20 152.1 4.5 132 448-584 612-771 (772)
423 KOG0664 Nemo-like MAPK-related 99.5 1E-15 2.2E-20 141.6 0.6 134 445-584 95-260 (449)
424 KOG1167 Serine/threonine prote 99.5 1.5E-14 3.2E-19 142.7 8.2 196 449-652 81-380 (418)
425 smart00221 STYKc Protein kinas 99.5 2.9E-14 6.3E-19 138.7 8.8 134 447-584 42-202 (225)
426 KOG1345 Serine/threonine kinas 99.5 3E-14 6.6E-19 132.0 5.4 194 445-656 63-287 (378)
427 KOG0662 Cyclin-dependent kinas 99.5 1.5E-13 3.2E-18 119.5 9.0 198 450-652 49-282 (292)
428 KOG1290 Serine/threonine prote 99.4 4.9E-13 1.1E-17 133.9 10.3 80 451-534 123-215 (590)
429 KOG0590 Checkpoint kinase and 99.4 9E-14 2E-18 151.7 5.2 187 449-652 368-584 (601)
430 KOG0670 U4/U6-associated splic 99.4 2.3E-13 4.9E-18 136.9 4.3 130 450-584 476-637 (752)
431 KOG0532 Leucine-rich repeat (L 99.4 2.2E-14 4.9E-19 145.9 -3.8 200 55-265 54-254 (722)
432 KOG4158 BRPK/PTEN-induced prot 99.3 7.8E-12 1.7E-16 122.3 9.2 172 459-655 273-512 (598)
433 KOG0532 Leucine-rich repeat (L 99.3 2.4E-13 5.2E-18 138.5 -1.6 175 97-281 73-247 (722)
434 PLN03150 hypothetical protein; 99.3 1E-11 2.2E-16 137.9 8.6 107 76-182 419-526 (623)
435 COG4886 Leucine-rich repeat (L 99.2 1.1E-11 2.4E-16 131.6 5.9 199 79-287 97-296 (394)
436 COG4886 Leucine-rich repeat (L 99.2 2.5E-11 5.3E-16 128.9 7.0 196 102-307 96-292 (394)
437 KOG1033 eIF-2alpha kinase PEK/ 99.2 1.3E-11 2.9E-16 125.9 4.1 148 474-650 328-509 (516)
438 COG0515 SPS1 Serine/threonine 99.0 1.6E-09 3.5E-14 112.1 12.0 194 447-653 42-275 (384)
439 KOG1266 Protein kinase [Signal 99.0 4.3E-10 9.3E-15 107.8 6.8 174 455-653 120-331 (458)
440 KOG0603 Ribosomal protein S6 k 99.0 2.5E-10 5.4E-15 119.1 5.2 167 450-647 44-232 (612)
441 KOG1240 Protein kinase contain 99.0 2.6E-10 5.6E-15 125.2 5.2 186 446-656 63-294 (1431)
442 KOG4658 Apoptotic ATPase [Sign 98.9 2E-09 4.2E-14 122.3 6.2 129 51-182 523-653 (889)
443 PF14580 LRR_9: Leucine-rich r 98.9 5.7E-10 1.2E-14 101.4 1.5 57 76-136 20-77 (175)
444 KOG4658 Apoptotic ATPase [Sign 98.9 2.2E-09 4.7E-14 121.9 6.2 178 51-232 545-730 (889)
445 KOG3207 Beta-tubulin folding c 98.9 2.9E-10 6.2E-15 113.0 -1.1 209 73-307 119-341 (505)
446 KOG1259 Nischarin, modulator o 98.8 5.5E-10 1.2E-14 105.5 0.5 104 170-280 283-386 (490)
447 KOG0606 Microtubule-associated 98.8 1.2E-09 2.6E-14 120.0 2.6 113 513-646 153-305 (1205)
448 KOG3207 Beta-tubulin folding c 98.8 4.5E-10 9.7E-15 111.7 -0.7 212 97-339 119-341 (505)
449 KOG1259 Nischarin, modulator o 98.8 7.7E-10 1.7E-14 104.5 0.4 207 65-284 204-415 (490)
450 KOG1909 Ran GTPase-activating 98.8 4.9E-10 1.1E-14 108.5 -1.2 241 51-305 30-311 (382)
451 PF14580 LRR_9: Leucine-rich r 98.8 4.9E-09 1.1E-13 95.4 4.9 65 167-232 60-126 (175)
452 PF13855 LRR_8: Leucine rich r 98.8 2.5E-09 5.5E-14 79.8 2.3 59 76-134 2-60 (61)
453 KOG0531 Protein phosphatase 1, 98.7 1E-09 2.3E-14 116.6 -2.1 129 73-208 70-199 (414)
454 PF13855 LRR_8: Leucine rich r 98.7 7.8E-09 1.7E-13 77.1 3.0 60 99-158 1-60 (61)
455 KOG0531 Protein phosphatase 1, 98.7 2.8E-09 6.1E-14 113.3 -1.3 197 97-306 70-269 (414)
456 KOG1909 Ran GTPase-activating 98.6 1.7E-09 3.7E-14 104.8 -3.1 252 69-337 24-311 (382)
457 KOG1164 Casein kinase (serine/ 98.6 2.8E-07 6.1E-12 94.7 12.7 192 449-660 63-300 (322)
458 PF14531 Kinase-like: Kinase-l 98.5 6.9E-08 1.5E-12 94.7 4.7 138 478-644 115-288 (288)
459 KOG0590 Checkpoint kinase and 98.5 2.5E-08 5.5E-13 109.4 1.8 182 452-651 70-284 (601)
460 KOG0606 Microtubule-associated 98.3 4.5E-07 9.9E-12 100.2 5.0 168 459-648 861-1084(1205)
461 PRK09188 serine/threonine prot 98.3 7.4E-07 1.6E-11 91.6 4.8 75 447-536 66-141 (365)
462 PF08263 LRRNT_2: Leucine rich 98.3 1E-06 2.2E-11 59.9 3.9 39 8-47 2-43 (43)
463 KOG1859 Leucine-rich repeat pr 98.1 6.1E-08 1.3E-12 102.3 -6.8 125 100-231 165-291 (1096)
464 KOG1859 Leucine-rich repeat pr 98.1 8.9E-08 1.9E-12 101.2 -5.6 179 68-256 102-291 (1096)
465 PRK10359 lipopolysaccharide co 98.1 6.8E-07 1.5E-11 85.1 0.4 114 449-575 82-215 (232)
466 PRK12274 serine/threonine prot 98.1 4.2E-06 9.2E-11 78.0 4.9 122 448-585 47-210 (218)
467 KOG4579 Leucine-rich repeat (L 98.0 2E-07 4.3E-12 78.4 -4.4 104 53-160 29-136 (177)
468 KOG2982 Uncharacterized conser 98.0 8.1E-07 1.7E-11 84.5 -2.1 84 74-157 70-156 (418)
469 KOG2982 Uncharacterized conser 97.9 3.1E-06 6.8E-11 80.6 0.4 86 51-136 71-159 (418)
470 PRK10345 hypothetical protein; 97.8 1.4E-05 3E-10 75.9 4.1 83 447-537 41-135 (210)
471 KOG2120 SCF ubiquitin ligase, 97.8 4.4E-07 9.6E-12 86.2 -6.5 85 124-208 186-273 (419)
472 KOG4579 Leucine-rich repeat (L 97.8 2.5E-06 5.4E-11 71.9 -1.5 111 50-164 52-163 (177)
473 KOG2120 SCF ubiquitin ligase, 97.8 2.8E-07 6E-12 87.6 -8.2 155 121-278 208-373 (419)
474 PF12799 LRR_4: Leucine Rich r 97.8 1.4E-05 3E-10 54.5 2.1 36 76-112 2-37 (44)
475 PF12799 LRR_4: Leucine Rich r 97.7 3E-05 6.6E-10 52.8 2.7 37 99-136 1-37 (44)
476 PRK15386 type III secretion pr 97.7 0.0001 2.3E-09 75.6 7.5 31 196-229 157-187 (426)
477 cd05147 RIO1_euk RIO kinase fa 97.7 4.2E-05 9.2E-10 71.8 4.1 81 451-537 68-148 (190)
478 PRK15386 type III secretion pr 97.5 0.00023 5E-09 73.1 7.6 57 71-133 48-104 (426)
479 COG5238 RNA1 Ran GTPase-activa 97.5 7.2E-05 1.6E-09 70.6 3.4 179 263-473 87-283 (388)
480 COG5238 RNA1 Ran GTPase-activa 97.4 3.4E-05 7.4E-10 72.7 0.2 37 196-232 186-227 (388)
481 KOG3665 ZYG-1-like serine/thre 97.4 4.1E-05 8.9E-10 85.3 0.8 149 99-249 122-280 (699)
482 KOG1166 Mitotic checkpoint ser 97.4 0.00016 3.5E-09 81.9 5.3 113 463-580 755-901 (974)
483 PRK09605 bifunctional UGMP fam 97.4 0.00012 2.7E-09 80.7 4.4 77 448-537 382-458 (535)
484 PRK14879 serine/threonine prot 97.4 0.00014 3.1E-09 69.7 3.9 81 448-537 45-125 (211)
485 cd05145 RIO1_like RIO kinase f 97.3 0.00022 4.8E-09 67.1 4.7 81 450-537 67-148 (190)
486 KOG1644 U2-associated snRNP A' 97.3 0.00037 7.9E-09 63.2 5.5 84 145-228 62-149 (233)
487 KOG1163 Casein kinase (serine/ 97.3 0.00016 3.5E-09 67.2 3.3 130 452-586 60-225 (341)
488 TIGR03724 arch_bud32 Kae1-asso 97.3 0.00016 3.6E-09 68.6 3.2 78 448-537 43-120 (199)
489 KOG1165 Casein kinase (serine/ 97.2 0.0006 1.3E-08 66.5 6.1 121 460-585 82-239 (449)
490 KOG1243 Protein kinase [Genera 97.2 0.00061 1.3E-08 72.9 6.7 118 451-579 58-200 (690)
491 KOG3665 ZYG-1-like serine/thre 97.2 0.00012 2.5E-09 81.8 1.5 95 241-339 170-265 (699)
492 KOG0601 Cyclin-dependent kinas 97.2 0.00059 1.3E-08 72.1 6.5 126 452-583 167-328 (524)
493 KOG1644 U2-associated snRNP A' 97.2 0.00046 1E-08 62.6 4.3 80 54-135 45-125 (233)
494 KOG0576 Mitogen-activated prot 96.7 0.00088 1.9E-08 71.2 2.3 131 449-583 280-431 (829)
495 KOG2739 Leucine-rich acidic nu 96.7 0.0012 2.6E-08 62.6 2.9 62 145-208 63-129 (260)
496 COG4248 Uncharacterized protei 96.5 0.022 4.9E-07 57.9 10.5 162 499-663 113-306 (637)
497 KOG2739 Leucine-rich acidic nu 96.5 0.0015 3.3E-08 61.9 2.1 61 74-136 42-104 (260)
498 smart00090 RIO RIO-like kinase 96.4 0.0026 5.6E-08 61.9 3.8 80 449-537 97-179 (237)
499 cd05120 APH_ChoK_like Aminogly 96.4 0.0032 7E-08 56.2 4.2 81 448-537 37-119 (155)
500 PF13306 LRR_5: Leucine rich r 96.4 0.0096 2.1E-07 51.8 7.0 81 71-154 8-88 (129)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=8.6e-78 Score=709.13 Aligned_cols=643 Identities=31% Similarity=0.520 Sum_probs=432.8
Q ss_pred ChhhHHHHHHHHhhcCCCcccccCCCCCCCCCCCccceeeCCCCCCEEEEEcCCCCCcccccccccCCCCCCEEeCCCCc
Q 040540 7 LTTDQSSLLAFKAHAFDYRSALANNWSISYPICSWAGISCGSRHQRVTALNLSDMGLGGTIPLHFGNLSFLVSLDISENN 86 (669)
Q Consensus 7 ~~~~~~~l~~~~~~~~~~~~~l~~~w~~~~~~c~~~g~~c~~~~~~v~~L~ls~~~l~~~~~~~~~~l~~L~~L~Ls~N~ 86 (669)
...|+.||++||+++.++.+.+.+ |+...++|.|.|++|.. .++|+.|||++++++|.++..|..+++|++|+|++|.
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~-w~~~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~ 104 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSN-WNSSADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQ 104 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCC-CCCCCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCc
Confidence 457899999999999777766654 98777899999999975 3589999999999888888888888888888888888
Q ss_pred CcccCCcccC-CCCCCCEEEccCCcCC----------------------ccCCccccCCcccccccccccCccccCCccc
Q 040540 87 FHGHLPKELG-QLRRLRVMSLAYNKLS----------------------GSFPSWIGVLSKLRILRLDYNNFTGPIPNSL 143 (669)
Q Consensus 87 l~~~~p~~l~-~l~~L~~L~L~~n~l~----------------------~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 143 (669)
+.+.+|..+. .+++|++|+|++|.+. +.+|..++++++|++|+|++|.+++.+|..+
T Consensus 105 ~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 184 (968)
T PLN00113 105 LSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL 184 (968)
T ss_pred cCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhh
Confidence 8877776543 5556666655555544 4455556666666666666666666666666
Q ss_pred CCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCcE
Q 040540 144 FNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGLIPPTIFNISTMRI 223 (669)
Q Consensus 144 ~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 223 (669)
+++++|++|++++|.+.+.+|..++++++|++|++++|.+++.+|..++.+++|++|++++|.+++.+|..+.++++|+.
T Consensus 185 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 264 (968)
T PLN00113 185 TNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQY 264 (968)
T ss_pred hhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCE
Confidence 66666666666666666666666666666666666666666666666666666666666666666555666666666666
Q ss_pred EEcccCCCccccchhhhccCCCCCeeecccCcccccCCccccCCCCCCEEeCCCCCccccCcccc---------------
Q 040540 224 LTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTF--------------- 288 (669)
Q Consensus 224 L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~--------------- 288 (669)
|++++|.+.+.+|..+. .+++|++|++++|++.+.+|..+.++++|+.|++++|.+.+.+|..+
T Consensus 265 L~L~~n~l~~~~p~~l~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~ 343 (968)
T PLN00113 265 LFLYQNKLSGPIPPSIF-SLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNK 343 (968)
T ss_pred EECcCCeeeccCchhHh-hccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCC
Confidence 66666655555555544 35555555555555555555544444455555544444444444444
Q ss_pred ---------CCCCCCCEEEccCCccccCCCCC--------------cc--cccccccCCCCCCCEEECcCCCCccccchh
Q 040540 289 ---------GNLRHLSVLNVMMNNLTTESSSA--------------DQ--WSFLSSLTNCRNLSNLALASNPLGGILPQL 343 (669)
Q Consensus 289 ---------~~l~~L~~L~l~~N~l~~~~~~~--------------~~--~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 343 (669)
..+++|+.|+++.|++.+..... +. ......+..+++|+.|++++|.+.+..|..
T Consensus 344 l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~ 423 (968)
T PLN00113 344 FSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSE 423 (968)
T ss_pred CcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChh
Confidence 44444444444444443211000 00 000011122233333333333332222211
Q ss_pred Hhhh-------------------------------------------------------------------hccccccce
Q 040540 344 IGNF-------------------------------------------------------------------SASLQNIYA 356 (669)
Q Consensus 344 ~~~~-------------------------------------------------------------------~~~l~~l~~ 356 (669)
+... ...+..|..
T Consensus 424 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~ 503 (968)
T PLN00113 424 FTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQ 503 (968)
T ss_pred HhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCE
Confidence 1000 011334455
Q ss_pred EeecCcccCCCCCccccccCCCcEEecCCCcccccCchhhcCCCCCCeeeCcCCccceeCcccccCCCCCCEEECCCCcc
Q 040540 357 FELGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGHIPPCLASLTSLRELHLGSNKL 436 (669)
Q Consensus 357 l~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~l~~N~l 436 (669)
+++++|.+.+.+|..+..+++|+.|++++|.+++.+|..+..+++|+.|++++|++++.+|..+..+.+|+.+++++|++
T Consensus 504 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l 583 (968)
T PLN00113 504 LKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHL 583 (968)
T ss_pred EECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcc
Confidence 55666666666666667777777777777777777777777788888888888888888888888888888888888888
Q ss_pred eecCCcccc-------------------------------------------------------------------cc--
Q 040540 437 SSSIPSSLA-------------------------------------------------------------------FR-- 447 (669)
Q Consensus 437 ~~~~p~~~~-------------------------------------------------------------------~~-- 447 (669)
.+.+|.... .+
T Consensus 584 ~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (968)
T PLN00113 584 HGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRV 663 (968)
T ss_pred eeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 765542100 00
Q ss_pred -----------------------------------------------------------------cCchhhhhhcccccc
Q 040540 448 -----------------------------------------------------------------SFDSECEVLRNVRHR 462 (669)
Q Consensus 448 -----------------------------------------------------------------~~~~e~~~l~~l~h~ 462 (669)
....|+..+++++||
T Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~Hp 743 (968)
T PLN00113 664 ENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHP 743 (968)
T ss_pred ccccccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCC
Confidence 001235556778899
Q ss_pred ccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCcc-----
Q 040540 463 NLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSV----- 537 (669)
Q Consensus 463 niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~~----- 537 (669)
|+++++++|......++|||||++|+|.++++. ++|.++.+|+.|+++|++|+|+. +.++++|||+|+..
T Consensus 744 nIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~-~~~~iiH~dlkp~Nil~~~ 818 (968)
T PLN00113 744 NIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCR-CSPAVVVGNLSPEKIIIDG 818 (968)
T ss_pred CcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccC-CCCCeecCCCCHHhEEECC
Confidence 999999999998899999999999999999963 79999999999999999999965 46799999999541
Q ss_pred ---------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCC
Q 040540 538 ---------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPH 602 (669)
Q Consensus 538 ---------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~ 602 (669)
......||++|||||+..+..++.|+|||||||++|||+||+.||+........+.+|++.....
T Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 898 (968)
T PLN00113 819 KDEPHLRLSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSD 898 (968)
T ss_pred CCceEEEeccccccccCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCc
Confidence 01122467899999999988899999999999999999999999976555556788888765433
Q ss_pred -CccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhHHH
Q 040540 603 -RLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIKVK 660 (669)
Q Consensus 603 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~~~ 660 (669)
.....+|+.+... .+...++..++.+++.+||+.||++||+|+||+++|+++.+.
T Consensus 899 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 899 CHLDMWIDPSIRGD---VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred cchhheeCccccCC---CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 2334455554322 112345667889999999999999999999999999998664
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.8e-39 Score=380.67 Aligned_cols=364 Identities=33% Similarity=0.539 Sum_probs=267.1
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccccc
Q 040540 51 QRVTALNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRL 130 (669)
Q Consensus 51 ~~v~~L~ls~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 130 (669)
.+++.|++++|.+.+.+|..++++++|++|+|++|.+.+.+|..++++++|++|++++|.+.+.+|..++++++|++|+|
T Consensus 188 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 267 (968)
T PLN00113 188 TSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFL 267 (968)
T ss_pred cCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEEC
Confidence 46788888888888888888888888888888888888888888888888888888888888788888888888888888
Q ss_pred cccCccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCCC
Q 040540 131 DYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGL 210 (669)
Q Consensus 131 ~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 210 (669)
++|.+++.+|..+.++++|+.|++++|.+.+.+|..+.++++|+.|++++|.+.+.+|..+..+++|+.|++++|.+++.
T Consensus 268 ~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 347 (968)
T PLN00113 268 YQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGE 347 (968)
T ss_pred cCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCc
Confidence 88888888888888888888888888888877887777888888888888887777777777777777777777777777
Q ss_pred CCccccCCCCCcEEEcccCCCccccchhhhccCCCCCeeecccCcccccCCccccCCCCCCEEeCCCCCccccCccccCC
Q 040540 211 IPPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGN 290 (669)
Q Consensus 211 ~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~ 290 (669)
+|..+..+++|+.|++++|.+++.+|..+. .+.+|+.|++++|++.+.+|..+..+++|+.|++++|.+.+.+|..|..
T Consensus 348 ~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~-~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~ 426 (968)
T PLN00113 348 IPKNLGKHNNLTVLDLSTNNLTGEIPEGLC-SSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTK 426 (968)
T ss_pred CChHHhCCCCCcEEECCCCeeEeeCChhHh-CcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhc
Confidence 777777777777777777777666666554 3445555555555555444444444444444444444444444444444
Q ss_pred ------------------------CCCCCEEEccCCccccCCCCC-------------ccc--ccccccCCCCCCCEEEC
Q 040540 291 ------------------------LRHLSVLNVMMNNLTTESSSA-------------DQW--SFLSSLTNCRNLSNLAL 331 (669)
Q Consensus 291 ------------------------l~~L~~L~l~~N~l~~~~~~~-------------~~~--~~~~~l~~l~~L~~L~l 331 (669)
+++|+.|++++|++.+..... +.. .....+..+++|+.|++
T Consensus 427 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L 506 (968)
T PLN00113 427 LPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKL 506 (968)
T ss_pred CCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEEC
Confidence 444444444444433211000 000 01122345566677777
Q ss_pred cCCCCccccchhHhhhhccccccceEeecCcccCCCCCccccccCCCcEEecCCCcccccCchhhcCCCCCCeeeCcCCc
Q 040540 332 ASNPLGGILPQLIGNFSASLQNIYAFELGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNK 411 (669)
Q Consensus 332 ~~n~l~~~~~~~~~~~~~~l~~l~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~ 411 (669)
++|.+.+.+|..+. .+.+|+.+++++|.+++.+|..+..+++|+.|++++|.+.+.+|..+..+..|+.+++++|.
T Consensus 507 s~N~l~~~~p~~~~----~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~ 582 (968)
T PLN00113 507 SENKLSGEIPDELS----SCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNH 582 (968)
T ss_pred cCCcceeeCChHHc----CccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCc
Confidence 77777766665543 36789999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeCccc
Q 040540 412 LSGHIPPC 419 (669)
Q Consensus 412 l~~~~p~~ 419 (669)
+.+.+|..
T Consensus 583 l~~~~p~~ 590 (968)
T PLN00113 583 LHGSLPST 590 (968)
T ss_pred ceeeCCCc
Confidence 99988853
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=309.28 Aligned_cols=208 Identities=39% Similarity=0.631 Sum_probs=178.2
Q ss_pred cccCchhhhhhccccccccceecccccccc-ccceeeccCCCCChHHhhhcCCC-ccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPD-FKALVLEFMPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ey~~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
.++|..|+.++.+++|+|+|+++|+|...+ ...||||||++|+|.++|+.... +++|..|++|++++|+||+|||+.
T Consensus 115 ~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~- 193 (361)
T KOG1187|consen 115 EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEG- 193 (361)
T ss_pred hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccC-
Confidence 456999999999999999999999999888 49999999999999999997655 899999999999999999999987
Q ss_pred CCCCeeecCCCCcc---------------------c-cc---cc-ccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 524 SSAPIIHCEGEDSV---------------------T-QT---TT-MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 524 ~~~~i~h~d~~~~~---------------------~-~~---~~-~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
+.++|||||+|++. . .. +. .||.+|+|||++..+..+.|+|||||||+++|++|
T Consensus 194 ~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElit 273 (361)
T KOG1187|consen 194 CPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELIT 273 (361)
T ss_pred CCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHh
Confidence 67899999999430 0 11 11 69999999999999999999999999999999999
Q ss_pred CCCCCCcCC-CCCccHHHHHHHhCCC-CccccccccccchhhhhhhhH-HHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 040540 578 RKRPTDEMF-TGEMSLRRWVKESLPH-RLSEVVDTNLVREEQAFSAKM-DCLLSIMDLALDCCMESPDKRMHMTDAAAKL 654 (669)
Q Consensus 578 g~~p~~~~~-~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l 654 (669)
|+.|.+... .+...+.+|++..... .+.+++|+.+.... ... ++..++..++.+|++.+|.+||+|.||+++|
T Consensus 274 gr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~----~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L 349 (361)
T KOG1187|consen 274 GRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGE----YPDEKEVKKLAELALRCLRPDPKERPTMSQVVKEL 349 (361)
T ss_pred CCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCC----CChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHH
Confidence 999887643 4455689998777755 58899999987321 122 6788899999999999999999999999999
Q ss_pred HHhH
Q 040540 655 KKIK 658 (669)
Q Consensus 655 ~~~~ 658 (669)
+.+.
T Consensus 350 ~~~~ 353 (361)
T KOG1187|consen 350 EGIL 353 (361)
T ss_pred Hhhc
Confidence 6654
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=305.99 Aligned_cols=368 Identities=22% Similarity=0.262 Sum_probs=311.4
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCccccccccc
Q 040540 52 RVTALNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLD 131 (669)
Q Consensus 52 ~v~~L~ls~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 131 (669)
.++.||+++|.++.+-+..|.++++|+.+++..|.++ .+|...+...+|+.|+|.+|.|+..-.+++..++.|+.||||
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 4678999999999888888899999999999999887 678766677789999999999987777888889999999999
Q ss_pred ccCccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCCCC
Q 040540 132 YNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGLI 211 (669)
Q Consensus 132 ~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 211 (669)
.|.++...-.+|..=.++++|+|++|.++..-.+.|.++.+|.+|.|+.|+++..++..|.+|++|+.|+|..|.+.-..
T Consensus 158 rN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive 237 (873)
T KOG4194|consen 158 RNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVE 237 (873)
T ss_pred hchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeeh
Confidence 99998665567777788999999999999888889999999999999999999888888888999999999999987655
Q ss_pred CccccCCCCCcEEEcccCCCccccchhhhccCCCCCeeecccCcccccCCccccCCCCCCEEeCCCCCccccCccccCCC
Q 040540 212 PPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGNL 291 (669)
Q Consensus 212 p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l 291 (669)
-..|..+.+|+.|.+..|.++ .+.+..+..+.++++|+|+.|+++..-..++.++++|+.|++|+|.+..+-++++...
T Consensus 238 ~ltFqgL~Sl~nlklqrN~I~-kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsft 316 (873)
T KOG4194|consen 238 GLTFQGLPSLQNLKLQRNDIS-KLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFT 316 (873)
T ss_pred hhhhcCchhhhhhhhhhcCcc-cccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhc
Confidence 667888999999999999987 6777777788999999999999988778888999999999999999988888888888
Q ss_pred CCCCEEEccCCccccCCCCCcccccccccCCCCCCCEEECcCCCCccccchhHhhhhccccccceEeecCcccCCCCCc-
Q 040540 292 RHLSVLNVMMNNLTTESSSADQWSFLSSLTNCRNLSNLALASNPLGGILPQLIGNFSASLQNIYAFELGFNDLNGTIPT- 370 (669)
Q Consensus 292 ~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~l~~l~l~~n~l~~~~~~- 370 (669)
++|+.|+|+.|+++..+. .++..++.|+.|+|++|.+...-... +..+.+|..|||+.|.++..+..
T Consensus 317 qkL~~LdLs~N~i~~l~~--------~sf~~L~~Le~LnLs~Nsi~~l~e~a----f~~lssL~~LdLr~N~ls~~IEDa 384 (873)
T KOG4194|consen 317 QKLKELDLSSNRITRLDE--------GSFRVLSQLEELNLSHNSIDHLAEGA----FVGLSSLHKLDLRSNELSWCIEDA 384 (873)
T ss_pred ccceeEeccccccccCCh--------hHHHHHHHhhhhcccccchHHHHhhH----HHHhhhhhhhcCcCCeEEEEEecc
Confidence 999999999999887653 34666788899999999887543322 34577888999999998876654
Q ss_pred --cccccCCCcEEecCCCcccccCchhhcCCCCCCeeeCcCCccceeCcccccCCCCCCEEECCCC
Q 040540 371 --SIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGHIPPCLASLTSLRELHLGSN 434 (669)
Q Consensus 371 --~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~l~~N 434 (669)
.|..++.|+.|++.+|++..+....|.++..|+.|||.+|.+...-|.+|..+ .|++|.+..-
T Consensus 385 a~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSs 449 (873)
T KOG4194|consen 385 AVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSS 449 (873)
T ss_pred hhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhccc
Confidence 46778888999999999988777889999999999999999988888888887 8888776553
No 5
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-35 Score=292.49 Aligned_cols=378 Identities=21% Similarity=0.227 Sum_probs=325.6
Q ss_pred CCEEEEEcCCCCCcccccccccC-C-CCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccc
Q 040540 51 QRVTALNLSDMGLGGTIPLHFGN-L-SFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRIL 128 (669)
Q Consensus 51 ~~v~~L~ls~~~l~~~~~~~~~~-l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 128 (669)
.....||.+++.+...--..+.. + +.-++||+++|.++.+.+..|.++++|+.+++.+|.+. .+|...+...+|+.|
T Consensus 52 c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L 130 (873)
T KOG4194|consen 52 CNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKL 130 (873)
T ss_pred CCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEE
Confidence 34577888888776432111111 1 34567999999999999999999999999999999998 789877777889999
Q ss_pred cccccCccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCC
Q 040540 129 RLDYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLS 208 (669)
Q Consensus 129 ~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~ 208 (669)
+|.+|.++..-..++..++.|+.|||+.|.++...-.+|..=.++++|+|++|+++..--..|..+.+|..|.|++|.++
T Consensus 131 ~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit 210 (873)
T KOG4194|consen 131 DLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT 210 (873)
T ss_pred eeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccc
Confidence 99999999888888999999999999999999777777888889999999999999888889999999999999999999
Q ss_pred CCCCccccCCCCCcEEEcccCCCccccchhhhccCCCCCeeecccCcccccCCccccCCCCCCEEeCCCCCccccCcccc
Q 040540 209 GLIPPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTF 288 (669)
Q Consensus 209 ~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~ 288 (669)
...+..|++++.|+.|+|..|++. .+.-..+.++++|+.|.|..|++...-...|..+.++..|+|+.|++...-..++
T Consensus 211 tLp~r~Fk~L~~L~~LdLnrN~ir-ive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~l 289 (873)
T KOG4194|consen 211 TLPQRSFKRLPKLESLDLNRNRIR-IVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWL 289 (873)
T ss_pred ccCHHHhhhcchhhhhhcccccee-eehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccc
Confidence 988888889999999999999985 3323345589999999999999998888889999999999999999997777889
Q ss_pred CCCCCCCEEEccCCccccCCCCCcccccccccCCCCCCCEEECcCCCCccccchhHhhhhccccccceEeecCcccCCCC
Q 040540 289 GNLRHLSVLNVMMNNLTTESSSADQWSFLSSLTNCRNLSNLALASNPLGGILPQLIGNFSASLQNIYAFELGFNDLNGTI 368 (669)
Q Consensus 289 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~l~~l~l~~n~l~~~~ 368 (669)
.+++.|+.|++++|.+..+. .+ ....+++|+.|+|++|.+....+..+.. +..|+.|+|++|.+....
T Consensus 290 fgLt~L~~L~lS~NaI~rih--~d------~WsftqkL~~LdLs~N~i~~l~~~sf~~----L~~Le~LnLs~Nsi~~l~ 357 (873)
T KOG4194|consen 290 FGLTSLEQLDLSYNAIQRIH--ID------SWSFTQKLKELDLSSNRITRLDEGSFRV----LSQLEELNLSHNSIDHLA 357 (873)
T ss_pred cccchhhhhccchhhhheee--cc------hhhhcccceeEeccccccccCChhHHHH----HHHhhhhcccccchHHHH
Confidence 99999999999999987763 22 3445789999999999999887776654 677899999999999887
Q ss_pred CccccccCCCcEEecCCCcccccCch---hhcCCCCCCeeeCcCCccceeCcccccCCCCCCEEECCCCcceecCCc
Q 040540 369 PTSIGTLQQLQGFYVPENNLQGYVPH---DLCHLERLNILNLSGNKLSGHIPPCLASLTSLRELHLGSNKLSSSIPS 442 (669)
Q Consensus 369 ~~~~~~l~~L~~l~l~~n~~~~~~p~---~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~ 442 (669)
...|..+++|+.|++..|.+...+-+ .|.++++|+.|.+.+|++......+|.++.+|++|+|.+|.+.+.-|.
T Consensus 358 e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~n 434 (873)
T KOG4194|consen 358 EGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPN 434 (873)
T ss_pred hhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeeccc
Confidence 88899999999999999999887643 477899999999999999876667999999999999999999865443
No 6
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-34 Score=289.40 Aligned_cols=197 Identities=26% Similarity=0.452 Sum_probs=160.3
Q ss_pred cccCchhhhhhccccccccceecccccccc-ccceeeccCCCCChHHhhhc-CCCccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPD-FKALVLEFMPNGSLEKWLYS-HNYFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ey~~~g~L~~~l~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
.+.|..|+.++.+++|||||+++|+|..+. ..++|||||++|+|.+++++ .+..+++..+++++.|||+|+.|||..
T Consensus 83 ~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~- 161 (362)
T KOG0192|consen 83 RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE- 161 (362)
T ss_pred HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-
Confidence 457889999999999999999999999887 68899999999999999987 467899999999999999999999964
Q ss_pred CCCCeeecCCCCc--------------------------ccccccccccccCcccccc--CCCcCccccchhhHHHHHHH
Q 040540 524 SSAPIIHCEGEDS--------------------------VTQTTTMATIGYMAPEYGS--EGIVSAKCDVYSYGVLLMET 575 (669)
Q Consensus 524 ~~~~i~h~d~~~~--------------------------~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~s~Gvil~el 575 (669)
.+ |||||+|+. ...+...||+.|||||++. ...|+.|+|||||||++|||
T Consensus 162 -~~-iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl 239 (362)
T KOG0192|consen 162 -GP-IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWEL 239 (362)
T ss_pred -CC-eeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHH
Confidence 22 999999943 0112246999999999999 56899999999999999999
Q ss_pred HhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHH
Q 040540 576 FTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655 (669)
Q Consensus 576 ~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~ 655 (669)
+||+.||..... ..+...+...... +. .+..+...+..++.+||..||++||++.+++..|+
T Consensus 240 ~t~~~Pf~~~~~--~~~~~~v~~~~~R-------p~---------~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~ 301 (362)
T KOG0192|consen 240 LTGEIPFEDLAP--VQVASAVVVGGLR-------PP---------IPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLE 301 (362)
T ss_pred HHCCCCCCCCCH--HHHHHHHHhcCCC-------CC---------CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHH
Confidence 999999987543 2233332211100 11 12235567789999999999999999999999999
Q ss_pred HhHHHhhh
Q 040540 656 KIKVKFLD 663 (669)
Q Consensus 656 ~~~~~~~~ 663 (669)
.+......
T Consensus 302 ~~~~~~~~ 309 (362)
T KOG0192|consen 302 SIMSHISS 309 (362)
T ss_pred HHHHhhcc
Confidence 99877643
No 7
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.98 E-value=9.6e-33 Score=266.28 Aligned_cols=186 Identities=22% Similarity=0.225 Sum_probs=153.0
Q ss_pred cccCchhhhhhccccccccceecccccccc-ccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPD-FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
.+++.+|+++++.++||+||+++|+|..+. .+.|+||||++|+|.++++.. ..+++....+|+.+|.+||.|||+.
T Consensus 121 ~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~-- 197 (364)
T KOG0581|consen 121 QKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEE-- 197 (364)
T ss_pred HHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhc--
Confidence 356778999999999999999999999988 599999999999999999854 4588899999999999999999953
Q ss_pred CCCeeecCCCCc-----------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 525 SAPIIHCEGEDS-----------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 525 ~~~i~h~d~~~~-----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+.|||||+|++ ....+++||..|||||.+.+..|+.++||||||++++|+++|+.|
T Consensus 198 -~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP 276 (364)
T KOG0581|consen 198 -RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFP 276 (364)
T ss_pred -cCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCC
Confidence 58999999964 124567899999999999999999999999999999999999999
Q ss_pred CCcCCC---CCccHHHHHHHhCCCCccccccccccchhhhhhhhH-HHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 582 TDEMFT---GEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKM-DCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 582 ~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|..... +...+..++-...|++ . +. .+++++.+++.+|+++||.+||++.|+++
T Consensus 277 ~~~~~~~~~~~~~Ll~~Iv~~ppP~---------------l--P~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 277 YPPPNPPYLDIFELLCAIVDEPPPR---------------L--PEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCCcCCCCCCHHHHHHHHhcCCCCC---------------C--CcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 976422 2222333322222211 1 22 36778899999999999999999999876
No 8
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=2.4e-33 Score=283.70 Aligned_cols=360 Identities=28% Similarity=0.439 Sum_probs=310.8
Q ss_pred CCEEEEEcCCCCCc-ccccccccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCccccccc
Q 040540 51 QRVTALNLSDMGLG-GTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILR 129 (669)
Q Consensus 51 ~~v~~L~ls~~~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 129 (669)
.-|+..|+++|.++ +..|.+...|+.++-|-|....+. .+|++++.+.+|++|.+++|++. .+-..+..|+.|+.+.
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVI 84 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHh
Confidence 34788999999999 567888999999999999998886 79999999999999999999987 5667788999999999
Q ss_pred ccccCccc-cCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCC
Q 040540 130 LDYNNFTG-PIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLS 208 (669)
Q Consensus 130 L~~n~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~ 208 (669)
+..|++.. -+|..++.|..|..|+++.|++. +.|..+..-+++.+|+||+|++..++-..|.+|+.|-+||||+|++.
T Consensus 85 ~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe 163 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE 163 (1255)
T ss_pred hhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh
Confidence 99999874 48899999999999999999997 78889999999999999999998666667789999999999999998
Q ss_pred CCCCccccCCCCCcEEEcccCCCcc----ccchhhhccCCCCCeeecccCccc-ccCCccccCCCCCCEEeCCCCCcccc
Q 040540 209 GLIPPTIFNISTMRILTLESNQLSG----RLPSTIGHSLRNIEYLALSTNNLI-GKIPNSITNATKLIGLDLGFNSFSGH 283 (669)
Q Consensus 209 ~~~p~~~~~l~~L~~L~l~~n~l~~----~~p~~~~~~l~~L~~L~ls~n~l~-~~~p~~~~~l~~L~~L~ls~n~l~~~ 283 (669)
. +|+.+..+.+|++|.|++|.+.- ++| .|.+|+.|.+++.+-+ ..+|.++..+.+|..+|+|.|.+. .
T Consensus 164 ~-LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLP-----smtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~ 236 (1255)
T KOG0444|consen 164 M-LPPQIRRLSMLQTLKLSNNPLNHFQLRQLP-----SMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-I 236 (1255)
T ss_pred h-cCHHHHHHhhhhhhhcCCChhhHHHHhcCc-----cchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-c
Confidence 5 57778999999999999998741 233 4778888999887643 457889999999999999999998 7
Q ss_pred CccccCCCCCCCEEEccCCccccCCCCCcccccccccCCCCCCCEEECcCCCCccccchhHhhhhccccccceEeecCcc
Q 040540 284 IPNTFGNLRHLSVLNVMMNNLTTESSSADQWSFLSSLTNCRNLSNLALASNPLGGILPQLIGNFSASLQNIYAFELGFND 363 (669)
Q Consensus 284 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~l~~l~l~~n~ 363 (669)
+|..+.++++|+.|+|+.|+++....... .+.+|++|+++.|+++. +|..++. ++.|..|....|+
T Consensus 237 vPecly~l~~LrrLNLS~N~iteL~~~~~---------~W~~lEtLNlSrNQLt~-LP~avcK----L~kL~kLy~n~Nk 302 (1255)
T KOG0444|consen 237 VPECLYKLRNLRRLNLSGNKITELNMTEG---------EWENLETLNLSRNQLTV-LPDAVCK----LTKLTKLYANNNK 302 (1255)
T ss_pred chHHHhhhhhhheeccCcCceeeeeccHH---------HHhhhhhhccccchhcc-chHHHhh----hHHHHHHHhccCc
Confidence 89999999999999999999988754433 34678999999999984 5665554 5566666777787
Q ss_pred cCC-CCCccccccCCCcEEecCCCcccccCchhhcCCCCCCeeeCcCCccceeCcccccCCCCCCEEECCCCcc
Q 040540 364 LNG-TIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGHIPPCLASLTSLRELHLGSNKL 436 (669)
Q Consensus 364 l~~-~~~~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~l~~N~l 436 (669)
+.- -+|..++.+.+|+.+...+|.+. .+|..++.+..|+.|.|++|++. .+|+++.-++.|..|++..|.-
T Consensus 303 L~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 303 LTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred ccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcC
Confidence 753 47889999999999999988876 78999999999999999999997 6899999999999999988753
No 9
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.97 E-value=4.7e-34 Score=275.30 Aligned_cols=371 Identities=30% Similarity=0.452 Sum_probs=285.1
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccccc
Q 040540 51 QRVTALNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRL 130 (669)
Q Consensus 51 ~~v~~L~ls~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 130 (669)
..+++|++++|.+. .+|++++.+..++.|+.++|+++ .+|.+++.+..|+.|+.++|.+. .+|+.++.+..|+.|+.
T Consensus 68 ~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~ 144 (565)
T KOG0472|consen 68 ACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDA 144 (565)
T ss_pred cceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhc
Confidence 34678888888886 66777888888888888888887 67888888888888888888887 67778888888888888
Q ss_pred cccCccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCCC
Q 040540 131 DYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGL 210 (669)
Q Consensus 131 ~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 210 (669)
.+|+++ ..|+.++++.+|..+++.+|.+....|..+. ++.|++|+..+|-+. .+|..++.+.+|.-|++..|++. .
T Consensus 145 ~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~ 220 (565)
T KOG0472|consen 145 TNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-F 220 (565)
T ss_pred cccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-c
Confidence 888887 6788888888888888888888755555444 888999998888875 77888999999999999999998 4
Q ss_pred CCccccCCCCCcEEEcccCCCccccchhhhccCCCCCeeecccCcccccCCccccCCCCCCEEeCCCCCccccCccccCC
Q 040540 211 IPPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGN 290 (669)
Q Consensus 211 ~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~ 290 (669)
+| +|..++.|..+.++.|++. .+|......++.+..||+.+|+++ +.|+.+.-+.+|..||+|+|.+++ .|.++++
T Consensus 221 lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~-Lp~sLgn 296 (565)
T KOG0472|consen 221 LP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISS-LPYSLGN 296 (565)
T ss_pred CC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCcccc-CCccccc
Confidence 55 8888999999999999986 889988888999999999999986 789999999999999999999984 6778899
Q ss_pred CCCCCEEEccCCccccCCC------------------------CC----------cccccccccCCCCC-----------
Q 040540 291 LRHLSVLNVMMNNLTTESS------------------------SA----------DQWSFLSSLTNCRN----------- 325 (669)
Q Consensus 291 l~~L~~L~l~~N~l~~~~~------------------------~~----------~~~~~~~~l~~l~~----------- 325 (669)
+ .|++|-+.+|.++.+.. .. ..+.+. ......+
T Consensus 297 l-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~-~~~~~i~tkiL~~s~~ql 374 (565)
T KOG0472|consen 297 L-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFP-DIYAIITTKILDVSDKQL 374 (565)
T ss_pred c-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCccc-chhhhhhhhhhccccccc
Confidence 9 99999999997653210 00 001000 0001111
Q ss_pred ---------------CCEEECcCCCCccccchh--------------------HhhhhccccccceEeecCcccCCCCCc
Q 040540 326 ---------------LSNLALASNPLGGILPQL--------------------IGNFSASLQNIYAFELGFNDLNGTIPT 370 (669)
Q Consensus 326 ---------------L~~L~l~~n~l~~~~~~~--------------------~~~~~~~l~~l~~l~l~~n~l~~~~~~ 370 (669)
.+..+++.|++... |.. +...-..++++..+++++|-+. .+|.
T Consensus 375 t~VPdEVfea~~~~~Vt~VnfskNqL~el-Pk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~ 452 (565)
T KOG0472|consen 375 TLVPDEVFEAAKSEIVTSVNFSKNQLCEL-PKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPE 452 (565)
T ss_pred ccCCHHHHHHhhhcceEEEecccchHhhh-hhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcch
Confidence 23445555554422 111 1111234678888899887766 6788
Q ss_pred cccccCCCcEEecCCCcccc-----------------------cCchhhcCCCCCCeeeCcCCccceeCcccccCCCCCC
Q 040540 371 SIGTLQQLQGFYVPENNLQG-----------------------YVPHDLCHLERLNILNLSGNKLSGHIPPCLASLTSLR 427 (669)
Q Consensus 371 ~~~~l~~L~~l~l~~n~~~~-----------------------~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~ 427 (669)
.++.+..|+.++++.|+|.. ..|..+.++.+|.+||+.+|.+. .+|+.++++++|+
T Consensus 453 e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~ 531 (565)
T KOG0472|consen 453 EMGSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLR 531 (565)
T ss_pred hhhhhhhhheecccccccccchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhcccccee
Confidence 88888889999998887652 23344677888999999999987 6788899999999
Q ss_pred EEECCCCcce
Q 040540 428 ELHLGSNKLS 437 (669)
Q Consensus 428 ~L~l~~N~l~ 437 (669)
+|.+.+|+|.
T Consensus 532 hLeL~gNpfr 541 (565)
T KOG0472|consen 532 HLELDGNPFR 541 (565)
T ss_pred EEEecCCccC
Confidence 9999999987
No 10
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-31 Score=267.73 Aligned_cols=194 Identities=25% Similarity=0.423 Sum_probs=159.7
Q ss_pred cccccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhc-CCCccCHHHHHHHHHhHHhhhhhhhcC
Q 040540 444 LAFRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS-HNYFLDILERLNIMIDVGSALEYLRHG 522 (669)
Q Consensus 444 ~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~ 522 (669)
+...+|.+|+.+|.+++|+++|++++.|..+..++||||||+.|+|.++|+. .+..+...+.+.++.|||+|++||.
T Consensus 243 m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe-- 320 (468)
T KOG0197|consen 243 MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE-- 320 (468)
T ss_pred cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH--
Confidence 3446788999999999999999999999998889999999999999999996 5667889999999999999999997
Q ss_pred CCCCCeeecCCCCc-----------------------cccccc---ccccccCccccccCCCcCccccchhhHHHHHHHH
Q 040540 523 HSSAPIIHCEGEDS-----------------------VTQTTT---MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 523 ~~~~~i~h~d~~~~-----------------------~~~~~~---~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~ 576 (669)
+..+||||+..- ...+.. .--..|.|||.+..++++.|+|||||||+||||+
T Consensus 321 --s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~f 398 (468)
T KOG0197|consen 321 --SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELF 398 (468)
T ss_pred --hCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHh
Confidence 568999997621 000011 1235799999999999999999999999999999
Q ss_pred h-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHH
Q 040540 577 T-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655 (669)
Q Consensus 577 t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~ 655 (669)
| |+.||..+... .+.+.+ ..+.|++.|+.|++.+.++|..||..+|++|||++.....++
T Consensus 399 T~G~~py~~msn~--ev~~~l-----------------e~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~ 459 (468)
T KOG0197|consen 399 TYGRVPYPGMSNE--EVLELL-----------------ERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLE 459 (468)
T ss_pred ccCCCCCCCCCHH--HHHHHH-----------------hccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHH
Confidence 9 89998765321 122222 223556778889999999999999999999999999988888
Q ss_pred HhHHH
Q 040540 656 KIKVK 660 (669)
Q Consensus 656 ~~~~~ 660 (669)
++...
T Consensus 460 ~~~~~ 464 (468)
T KOG0197|consen 460 DFFTS 464 (468)
T ss_pred Hhhhc
Confidence 87543
No 11
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.96 E-value=3.5e-30 Score=258.26 Aligned_cols=188 Identities=22% Similarity=0.355 Sum_probs=150.3
Q ss_pred hhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeee
Q 040540 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH 530 (669)
Q Consensus 451 ~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h 530 (669)
.++.-+++++|+||+.+.|.|......+||||||+.|.|+++|+.. ..+.-...+....+||.|+.|||. ..|||
T Consensus 161 TdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~-~~itp~llv~Wsk~IA~GM~YLH~----hKIIH 235 (904)
T KOG4721|consen 161 TDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAG-RPITPSLLVDWSKGIAGGMNYLHL----HKIIH 235 (904)
T ss_pred hhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhcc-CccCHHHHHHHHHHhhhhhHHHHH----hhHhh
Confidence 3677899999999999999999888889999999999999999864 455656667888999999999994 47999
Q ss_pred cCCCCc------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCC
Q 040540 531 CEGEDS------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMF 586 (669)
Q Consensus 531 ~d~~~~------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~ 586 (669)
||+|.. .+..++.||..|||||++.....++|+||||||||||||+||.+||.+..
T Consensus 236 RDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd 315 (904)
T KOG4721|consen 236 RDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD 315 (904)
T ss_pred hccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc
Confidence 999943 12234569999999999999999999999999999999999999997643
Q ss_pred CCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhHHHh
Q 040540 587 TGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIKVKF 661 (669)
Q Consensus 587 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~~~~ 661 (669)
...+. | -+-... ...+-+..++..++-++.+||+..|..||++++++.-|+=.++.+
T Consensus 316 ssAII---w-----------GVGsNs----L~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pel 372 (904)
T KOG4721|consen 316 SSAII---W-----------GVGSNS----LHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPEL 372 (904)
T ss_pred hheeE---E-----------eccCCc----ccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHH
Confidence 22210 1 010111 111235567788899999999999999999999998877665554
No 12
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=6.2e-31 Score=266.29 Aligned_cols=351 Identities=26% Similarity=0.412 Sum_probs=298.1
Q ss_pred cCCCCCCEEeCCCCcCc-ccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccccccccCccccCCcccCCCCCCC
Q 040540 72 GNLSFLVSLDISENNFH-GHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLE 150 (669)
Q Consensus 72 ~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 150 (669)
+-|+..+-.|+++|.++ +..|.....++++++|-|...++. .+|+.++.+.+|++|.+++|++. .+.+.+..|+.|+
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LR 81 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLR 81 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhH
Confidence 45677888999999999 578999999999999999999987 78999999999999999999997 6778899999999
Q ss_pred eeeccccccc-ccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEcccC
Q 040540 151 MLRAEFNIIG-GTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGLIPPTIFNISTMRILTLESN 229 (669)
Q Consensus 151 ~L~l~~n~l~-~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n 229 (669)
.+.+..|++. .-+|..+..|..|..|+||+|++. +.|..+...+++..|+||+|+|..+.-+.+.+++-|-.|||++|
T Consensus 82 sv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~N 160 (1255)
T KOG0444|consen 82 SVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNN 160 (1255)
T ss_pred HHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccc
Confidence 9999998874 468888999999999999999997 78888999999999999999999766666779999999999999
Q ss_pred CCccccchhhhccCCCCCeeecccCcccccCCccccCCCCCCEEeCCCCCcc-ccCccccCCCCCCCEEEccCCccccCC
Q 040540 230 QLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFS-GHIPNTFGNLRHLSVLNVMMNNLTTES 308 (669)
Q Consensus 230 ~l~~~~p~~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~ 308 (669)
++. .+|+.+. .+..|++|+|++|.+..---..+..+++|+.|.+++.+-+ .-+|.++..+.+|..+|++.|++...+
T Consensus 161 rLe-~LPPQ~R-RL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~vP 238 (1255)
T KOG0444|consen 161 RLE-MLPPQIR-RLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPIVP 238 (1255)
T ss_pred hhh-hcCHHHH-HHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCcch
Confidence 996 7888876 5889999999999875433334456778888888886543 347889999999999999999987654
Q ss_pred CCCcccccccccCCCCCCCEEECcCCCCccccchhHhhhhccccccceEeecCcccCCCCCccccccCCCcEEecCCCcc
Q 040540 309 SSADQWSFLSSLTNCRNLSNLALASNPLGGILPQLIGNFSASLQNIYAFELGFNDLNGTIPTSIGTLQQLQGFYVPENNL 388 (669)
Q Consensus 309 ~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~l~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~~ 388 (669)
..+.++++|+.|++++|+++...- ..+. -.+++.|+++.|+++ .+|..+..++.|+.|++.+|.+
T Consensus 239 ---------ecly~l~~LrrLNLS~N~iteL~~-~~~~----W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL 303 (1255)
T KOG0444|consen 239 ---------ECLYKLRNLRRLNLSGNKITELNM-TEGE----WENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKL 303 (1255)
T ss_pred ---------HHHhhhhhhheeccCcCceeeeec-cHHH----Hhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcc
Confidence 346678899999999999875421 1111 256888999999998 6899999999999999999876
Q ss_pred cc-cCchhhcCCCCCCeeeCcCCccceeCcccccCCCCCCEEECCCCcceecCCccc
Q 040540 389 QG-YVPHDLCHLERLNILNLSGNKLSGHIPPCLASLTSLRELHLGSNKLSSSIPSSL 444 (669)
Q Consensus 389 ~~-~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~ 444 (669)
.- -+|+.++.+..|+.+..++|++. .+|++++.+.+|+.|.|+.|++. ++|..+
T Consensus 304 ~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaI 358 (1255)
T KOG0444|consen 304 TFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAI 358 (1255)
T ss_pred cccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhh
Confidence 53 36888999999999999999885 89999999999999999999997 567654
No 13
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.4e-29 Score=244.31 Aligned_cols=185 Identities=22% Similarity=0.263 Sum_probs=148.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
...+|++++.++.|||||++.+++..++..|||||||.+|+|.+.+-.+ ..+.+..-..++.|+..|+.|||. .+
T Consensus 222 ~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~n-k~l~ed~~K~~f~Qll~avkYLH~----~G 296 (475)
T KOG0615|consen 222 DVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVAN-KYLREDLGKLLFKQLLTAVKYLHS----QG 296 (475)
T ss_pred hhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhc-cccccchhHHHHHHHHHHHHHHHH----cC
Confidence 3568999999999999999999999999999999999999999999854 346666777899999999999994 58
Q ss_pred eeecCCCCc---------------------------ccccccccccccCccccccCCC---cCccccchhhHHHHHHHHh
Q 040540 528 IIHCEGEDS---------------------------VTQTTTMATIGYMAPEYGSEGI---VSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 528 i~h~d~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~Gvil~el~t 577 (669)
|+|||+|+. ....+.+||+.|.|||++.+.. +..|+|+||+|||||-+++
T Consensus 297 I~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLs 376 (475)
T KOG0615|consen 297 IIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLS 376 (475)
T ss_pred cccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEec
Confidence 999999964 1234557999999999997754 4458899999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|.+||++...+. .+.+-+..+. .. .-.+.|.+...++.+++.+++..||++|||+.|+++
T Consensus 377 G~pPFS~~~~~~-sl~eQI~~G~-----------y~---f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 377 GYPPFSEEYTDP-SLKEQILKGR-----------YA---FGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred cCCCcccccCCc-cHHHHHhcCc-----------cc---ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 999998743322 1222111100 00 111347788889999999999999999999999986
No 14
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.1e-29 Score=253.97 Aligned_cols=183 Identities=19% Similarity=0.243 Sum_probs=149.5
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+-...|+.+|+..+|+|+|.++..+...+..|+|||||++|+|.+.+.. ..+++.+...|.+++.+||+|||. .
T Consensus 315 eLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~--~~~~E~qIA~Icre~l~aL~fLH~----~ 388 (550)
T KOG0578|consen 315 ELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTK--TRMTEGQIAAICREILQGLKFLHA----R 388 (550)
T ss_pred hhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhc--ccccHHHHHHHHHHHHHHHHHHHh----c
Confidence 3456799999999999999999999888999999999999999999964 458999999999999999999994 5
Q ss_pred CeeecCCCCc-------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDS-------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~-------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+|+|||+|.. ....+.+||+.|||||+.....|+.|+||||+||+++||+.|.+|
T Consensus 389 gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPP 468 (550)
T KOG0578|consen 389 GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPP 468 (550)
T ss_pred ceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCC
Confidence 8999999943 134556799999999999999999999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|... ... .+.|.-... ..+....++..+..+.+|..+|++.||.+||++.|+++
T Consensus 469 YlnE--~Pl-rAlyLIa~n--------------g~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 469 YLNE--NPL-RALYLIATN--------------GTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred ccCC--ChH-HHHHHHhhc--------------CCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 9641 111 111211110 00112224566778899999999999999999999986
No 15
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=5.3e-29 Score=254.39 Aligned_cols=181 Identities=20% Similarity=0.259 Sum_probs=149.5
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+...+|+++.+.++|||||++++++.+.+.+|||.|+|++|+|.++++ ++.++.+.+...+++||+.|+.|||. .
T Consensus 63 eKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~----~ 137 (592)
T KOG0575|consen 63 EKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHS----L 137 (592)
T ss_pred HHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHh----c
Confidence 345679999999999999999999999999999999999999999998 56789999999999999999999994 4
Q ss_pred CeeecCCCCc-------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDS-------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~-------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+|||||+|-. ....+.+|||.|.|||++....++..+||||+|||+|-|++|++|
T Consensus 138 ~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PP 217 (592)
T KOG0575|consen 138 GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPP 217 (592)
T ss_pred CceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCC
Confidence 7999998811 234556899999999999999999999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|+... +.+.-++ +.... +..|...+..+.+++.+.+.+||.+|||+++|+.
T Consensus 218 Fetk~-----vkety~~-------------Ik~~~--Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 218 FETKT-----VKETYNK-------------IKLNE--YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred cccch-----HHHHHHH-------------HHhcC--cccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 97521 1111110 11111 1113355667889999999999999999999975
No 16
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=5.9e-29 Score=263.97 Aligned_cols=193 Identities=25% Similarity=0.465 Sum_probs=156.9
Q ss_pred ccccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC---------CC----ccCHHHHHHHHHh
Q 040540 445 AFRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH---------NY----FLDILERLNIMID 511 (669)
Q Consensus 445 ~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~---------~~----~l~~~~~~~i~~~ 511 (669)
..++|.+|.+.+..++|+|||+++|.|..++..++|+|||..|+|.++|+.+ +. +++..+.+.|+.|
T Consensus 532 ~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~Q 611 (774)
T KOG1026|consen 532 ARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQ 611 (774)
T ss_pred HHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHH
Confidence 3468999999999999999999999999999999999999999999999752 22 3788899999999
Q ss_pred HHhhhhhhhcCCCCCCeeecCCCCcc-----------------------ccc----ccccccccCccccccCCCcCcccc
Q 040540 512 VGSALEYLRHGHSSAPIIHCEGEDSV-----------------------TQT----TTMATIGYMAPEYGSEGIVSAKCD 564 (669)
Q Consensus 512 i~~~l~~lh~~~~~~~i~h~d~~~~~-----------------------~~~----~~~gt~~y~aPE~~~~~~~~~~~D 564 (669)
||.|++||- +..++|||+..-. ... ...--.+||+||.+..++|+.++|
T Consensus 612 IAaGM~YLs----~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSD 687 (774)
T KOG1026|consen 612 IAAGMEYLS----SHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESD 687 (774)
T ss_pred HHHHHHHHH----hCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhh
Confidence 999999995 5679999987310 000 011246899999999999999999
Q ss_pred chhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCC
Q 040540 565 VYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDK 643 (669)
Q Consensus 565 v~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~ 643 (669)
||||||+|||++| |+.||..... ..+.+.++.+. + .+.++.++..+..+|..||+++|.+
T Consensus 688 VWs~GVvLWEIFsyG~QPy~glSn--~EVIe~i~~g~-----------l------L~~Pe~CP~~vY~LM~~CW~~~P~~ 748 (774)
T KOG1026|consen 688 VWSFGVVLWEIFSYGKQPYYGLSN--QEVIECIRAGQ-----------L------LSCPENCPTEVYSLMLECWNENPKR 748 (774)
T ss_pred hhhhhhhhhhhhccccCcccccch--HHHHHHHHcCC-----------c------ccCCCCCCHHHHHHHHHHhhcCccc
Confidence 9999999999998 8999977432 22333333221 1 2346788999999999999999999
Q ss_pred CCCHHHHHHHHHHhHHH
Q 040540 644 RMHMTDAAAKLKKIKVK 660 (669)
Q Consensus 644 Rps~~~v~~~l~~~~~~ 660 (669)
||+++||-..|+.....
T Consensus 749 RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 749 RPSFKEIHSRLQAWAQA 765 (774)
T ss_pred CCCHHHHHHHHHHHHhc
Confidence 99999999999987543
No 17
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.95 E-value=2.5e-31 Score=256.48 Aligned_cols=362 Identities=30% Similarity=0.445 Sum_probs=288.2
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCccccccccc
Q 040540 52 RVTALNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLD 131 (669)
Q Consensus 52 ~v~~L~ls~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 131 (669)
.++.+++++|.+.. +.+++.++..|.+|++++|.+. ..|.+++.+.+++.|+.++|+++ .+|+.++++.+|+.|+.+
T Consensus 46 ~l~~lils~N~l~~-l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLEV-LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchhh-ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 46789999999974 4557899999999999999998 78889999999999999999998 789999999999999999
Q ss_pred ccCccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCCCC
Q 040540 132 YNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGLI 211 (669)
Q Consensus 132 ~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 211 (669)
.|.+. .+|++++.+..|..++..+|+++ .+|.++.++.+|..|++.+|++....|..+. ++.|++||...|-++ .+
T Consensus 123 ~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tl 198 (565)
T KOG0472|consen 123 SNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TL 198 (565)
T ss_pred cccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cC
Confidence 99998 78899999999999999999997 7888999999999999999999966666655 999999999999887 57
Q ss_pred CccccCCCCCcEEEcccCCCccccchhhhccCCCCCeeecccCcccccCCcc-ccCCCCCCEEeCCCCCccccCccccCC
Q 040540 212 PPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNS-ITNATKLIGLDLGFNSFSGHIPNTFGN 290 (669)
Q Consensus 212 p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l~~~~p~~-~~~l~~L~~L~ls~n~l~~~~p~~~~~ 290 (669)
|+.++.+.+|..|++..|.+. .+| .|. +...|..|.+..|++. .+|.. ...++++..||+..|++. ++|..+.-
T Consensus 199 P~~lg~l~~L~~LyL~~Nki~-~lP-ef~-gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~cl 273 (565)
T KOG0472|consen 199 PPELGGLESLELLYLRRNKIR-FLP-EFP-GCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICL 273 (565)
T ss_pred ChhhcchhhhHHHHhhhcccc-cCC-CCC-ccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHH
Confidence 999999999999999999996 677 443 5778999999999986 45544 559999999999999998 78999999
Q ss_pred CCCCCEEEccCCccccCCCCCcccccccccCCCCCCCEEECcCCCCccccchhHh-----------h-------------
Q 040540 291 LRHLSVLNVMMNNLTTESSSADQWSFLSSLTNCRNLSNLALASNPLGGILPQLIG-----------N------------- 346 (669)
Q Consensus 291 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~-----------~------------- 346 (669)
+++|..||+++|.+++.+ .+++++ .|+.|.+.+|++..+-..++. .
T Consensus 274 LrsL~rLDlSNN~is~Lp---------~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~ 343 (565)
T KOG0472|consen 274 LRSLERLDLSNNDISSLP---------YSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGG 343 (565)
T ss_pred hhhhhhhcccCCccccCC---------cccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCccc
Confidence 999999999999998764 346677 788888888875432100000 0
Q ss_pred -----------hh--cccc--------------------------ccceEeecCccc-----------------------
Q 040540 347 -----------FS--ASLQ--------------------------NIYAFELGFNDL----------------------- 364 (669)
Q Consensus 347 -----------~~--~~l~--------------------------~l~~l~l~~n~l----------------------- 364 (669)
++ .... -+...+++.|++
T Consensus 344 ~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~ 423 (565)
T KOG0472|consen 344 TETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNK 423 (565)
T ss_pred ccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCc
Confidence 00 0000 011233333332
Q ss_pred CCCCCccccccCCCcEEecCCCcccccCchhhcCCCCCCeeeCcCCccceeCcccccCCCCCCEEECCCCcce
Q 040540 365 NGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGHIPPCLASLTSLRELHLGSNKLS 437 (669)
Q Consensus 365 ~~~~~~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~l~~N~l~ 437 (669)
-+-+|..+..+++|..|++++|-+. .+|..+..+..|++||++.|+|. .+|.++-.+..++.+-.+.|++.
T Consensus 424 isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~ 494 (565)
T KOG0472|consen 424 ISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIG 494 (565)
T ss_pred cccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhcccccc
Confidence 2245666788899999999988665 68899999999999999999886 56665544444444444445554
No 18
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.95 E-value=2.6e-28 Score=237.64 Aligned_cols=133 Identities=28% Similarity=0.425 Sum_probs=118.9
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
....|+++++.++|||||.+++++..++++++|||||.+|+|.++++.++ .+++.....++.|+|.|+++||. +.
T Consensus 55 ~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~----~~ 129 (429)
T KOG0595|consen 55 LLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHE----NN 129 (429)
T ss_pred HHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 34579999999999999999999999999999999999999999999654 58999999999999999999994 58
Q ss_pred eeecCCCCcc------------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 528 IIHCEGEDSV------------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 528 i~h~d~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
|||||+|+.. ...+.+|++.|||||+....+|+.|+|+||.|+|+||+++
T Consensus 130 IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~ 209 (429)
T KOG0595|consen 130 IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLT 209 (429)
T ss_pred eeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHh
Confidence 9999999530 1123369999999999999999999999999999999999
Q ss_pred CCCCCCcC
Q 040540 578 RKRPTDEM 585 (669)
Q Consensus 578 g~~p~~~~ 585 (669)
|+.||+..
T Consensus 210 g~~Pf~a~ 217 (429)
T KOG0595|consen 210 GKPPFDAE 217 (429)
T ss_pred CCCCcccc
Confidence 99999863
No 19
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=7.1e-28 Score=236.38 Aligned_cols=192 Identities=21% Similarity=0.232 Sum_probs=148.6
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
..+..|+..|+.++||||++++..+..+...|+||.||.+|++.++++.. ...+++.....|.+++.+||.|||+.
T Consensus 69 d~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~--- 145 (516)
T KOG0582|consen 69 DALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN--- 145 (516)
T ss_pred HHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---
Confidence 35667999999999999999999999999999999999999999999852 23488888999999999999999954
Q ss_pred CCeeecCCCCc----------------------------ccc-cccccccccCccccccC--CCcCccccchhhHHHHHH
Q 040540 526 APIIHCEGEDS----------------------------VTQ-TTTMATIGYMAPEYGSE--GIVSAKCDVYSYGVLLME 574 (669)
Q Consensus 526 ~~i~h~d~~~~----------------------------~~~-~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~e 574 (669)
+-||||+|.. ... .+.+||+.|||||++.. ..|+.|+|||||||+..|
T Consensus 146 -G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~E 224 (516)
T KOG0582|consen 146 -GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACE 224 (516)
T ss_pred -CceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHH
Confidence 7899999943 011 45579999999999544 559999999999999999
Q ss_pred HHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 575 TFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 575 l~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+++|..||..+.+-.. +..-+...+|...... .+..........+.+++..|+++||++|||+++.++
T Consensus 225 LA~G~aPf~k~pPmkv-Ll~tLqn~pp~~~t~~---------~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 225 LAHGHAPFSKYPPMKV-LLLTLQNDPPTLLTSG---------LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred HhcCCCCcccCChHHH-HHHHhcCCCCCccccc---------CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 9999999987543221 2222222222111001 111223344557899999999999999999999976
No 20
>PHA02988 hypothetical protein; Provisional
Probab=99.94 E-value=1.6e-27 Score=240.79 Aligned_cols=191 Identities=21% Similarity=0.242 Sum_probs=147.6
Q ss_pred ccCchhhhhhccccccccceecccccc----ccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSN----PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHG 522 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~ 522 (669)
+.+.+|+..+.+++|||++++++++.. ....++||||+++|+|.+++++. ..+++....+++.++++|+.|+|..
T Consensus 63 ~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~ 141 (283)
T PHA02988 63 DITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKY 141 (283)
T ss_pred HHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhc
Confidence 456689999999999999999998865 34678999999999999999864 4688999999999999999999952
Q ss_pred CCCCCeeecCCCCcc----------------------cccccccccccCccccccC--CCcCccccchhhHHHHHHHHhC
Q 040540 523 HSSAPIIHCEGEDSV----------------------TQTTTMATIGYMAPEYGSE--GIVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 523 ~~~~~i~h~d~~~~~----------------------~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~el~tg 578 (669)
.+++|||+++.. ......||..|+|||++.+ ..++.++|||||||++|||+||
T Consensus 142 ---~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g 218 (283)
T PHA02988 142 ---TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTG 218 (283)
T ss_pred ---CCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHC
Confidence 356799998531 0112357889999999876 6799999999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIK 658 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~ 658 (669)
+.||..... ..+...+..... + + +.+..++..+.+++.+||+.||++||||.|+++.|+.++
T Consensus 219 ~~Pf~~~~~--~~~~~~i~~~~~-~------~---------~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 219 KIPFENLTT--KEIYDLIINKNN-S------L---------KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred CCCCCCCCH--HHHHHHHHhcCC-C------C---------CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 999976321 111111111000 0 0 011133456889999999999999999999999999876
Q ss_pred H
Q 040540 659 V 659 (669)
Q Consensus 659 ~ 659 (669)
.
T Consensus 281 ~ 281 (283)
T PHA02988 281 F 281 (283)
T ss_pred h
Confidence 3
No 21
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=5.6e-28 Score=237.10 Aligned_cols=183 Identities=20% Similarity=0.255 Sum_probs=147.9
Q ss_pred cccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
..+++.|+..+..++++|+.++++.+..+...+++||||.+|++.+.++. +..+++....-|++++..|+.|+|..
T Consensus 55 Iediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~-~~~~~E~~i~~ilre~l~~l~ylH~~--- 130 (467)
T KOG0201|consen 55 IEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKS-GNILDEFEIAVILREVLKGLDYLHSE--- 130 (467)
T ss_pred hHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhcc-CCCCccceeeeehHHHHHHhhhhhhc---
Confidence 45677899999999999999999999999999999999999999999974 44457777777889999999999954
Q ss_pred CCeeecCCCCc-------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCC
Q 040540 526 APIIHCEGEDS-------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 526 ~~i~h~d~~~~-------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
+.+|||+|.. ....+++||+.|||||++.+..|+.||||||+||+.+||++|.+
T Consensus 131 -~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GeP 209 (467)
T KOG0201|consen 131 -KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEP 209 (467)
T ss_pred -ceecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCC
Confidence 7899999943 12356689999999999998899999999999999999999999
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|+....+. ++--.+.+ ..++.. ...+...+++++..|+.+||+.||++.++++
T Consensus 210 P~s~~hPm--------------rvlflIpk---~~PP~L--~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 210 PHSKLHPM--------------RVLFLIPK---SAPPRL--DGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred CCcccCcc--------------eEEEeccC---CCCCcc--ccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 99775431 11111111 111111 1245667899999999999999999999976
No 22
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.94 E-value=6.5e-28 Score=224.30 Aligned_cols=192 Identities=18% Similarity=0.263 Sum_probs=159.2
Q ss_pred CCcccccccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhh
Q 040540 440 IPSSLAFRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 519 (669)
Q Consensus 440 ~p~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~l 519 (669)
.|-...++++..|+.+|.+++.+.+|+++|.+......|||||||.-|++.+.++-++.++.+.+...|..+..+||+||
T Consensus 66 VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YL 145 (502)
T KOG0574|consen 66 VPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYL 145 (502)
T ss_pred cCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHH
Confidence 44444566788899999999999999999999999999999999999999999998888999999999999999999999
Q ss_pred hcCCCCCCeeecCCCCc-------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHH
Q 040540 520 RHGHSSAPIIHCEGEDS-------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLME 574 (669)
Q Consensus 520 h~~~~~~~i~h~d~~~~-------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~e 574 (669)
|+. .-||||+|.. ....+.+||+.|||||++....|..++||||+||+..|
T Consensus 146 H~~----~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIE 221 (502)
T KOG0574|consen 146 HDL----KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIE 221 (502)
T ss_pred HHH----HHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhh
Confidence 965 6799999843 23455679999999999999999999999999999999
Q ss_pred HHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 575 TFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 575 l~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|..|++||.+..+-... ..+| ...++-|..+...+..+.+++.+|+.++|++|-|+.++++
T Consensus 222 MAEG~PPYsDIHPMRAI------FMIP-----------T~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 222 MAEGRPPYSDIHPMRAI------FMIP-----------TKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred hhcCCCCccccccccee------Eecc-----------CCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 99999999874321100 0001 1112334456778888999999999999999999888766
No 23
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.94 E-value=2.4e-27 Score=233.68 Aligned_cols=187 Identities=22% Similarity=0.285 Sum_probs=142.8
Q ss_pred cccCchhhhhhccccccccceecccccccc--ccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
.+.+..|+.++.+++|||||+++|...... ..++.|||+++|+|.+++.+.+..+++.....+..+|++||+|||
T Consensus 58 ~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylH--- 134 (313)
T KOG0198|consen 58 SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLH--- 134 (313)
T ss_pred HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---
Confidence 345678999999999999999999865544 578999999999999999876557899999999999999999999
Q ss_pred CCCCeeecCCCCcc---------------------c--------ccccccccccCccccccCCC-cCccccchhhHHHHH
Q 040540 524 SSAPIIHCEGEDSV---------------------T--------QTTTMATIGYMAPEYGSEGI-VSAKCDVYSYGVLLM 573 (669)
Q Consensus 524 ~~~~i~h~d~~~~~---------------------~--------~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gvil~ 573 (669)
+.+++|||+|+.. . .....||+.|||||++..+. ...++||||+||++.
T Consensus 135 -s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVv 213 (313)
T KOG0198|consen 135 -SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVV 213 (313)
T ss_pred -hCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEE
Confidence 4689999999320 0 11235999999999998643 335999999999999
Q ss_pred HHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 574 ETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 574 el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
||+||++||.... + ...++-...... .-|.+ +...+.++.+++.+|++.||++||||.++++-
T Consensus 214 EM~Tg~~PW~~~~-~---~~~~~~~ig~~~----~~P~i---------p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 214 EMLTGKPPWSEFF-E---EAEALLLIGRED----SLPEI---------PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred eccCCCCcchhhc-c---hHHHHHHHhccC----CCCCC---------CcccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 9999999997631 1 111111100000 00111 22345677899999999999999999999874
No 24
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.5e-27 Score=260.86 Aligned_cols=194 Identities=24% Similarity=0.384 Sum_probs=157.5
Q ss_pred cccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC------CCccCHHHHHHHHHhHHhhhhhh
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH------NYFLDILERLNIMIDVGSALEYL 519 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~------~~~l~~~~~~~i~~~i~~~l~~l 519 (669)
..+|..|..+|++..|||||+++|.|......+|++|||.+|+|..+|++. ...+...+.+.|++|||+|+.||
T Consensus 739 ~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YL 818 (1025)
T KOG1095|consen 739 VSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYL 818 (1025)
T ss_pred HHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHH
Confidence 356788999999999999999999999988899999999999999999985 56788899999999999999999
Q ss_pred hcCCCCCCeeecCCCCcc-----------------------cccccc----cccccCccccccCCCcCccccchhhHHHH
Q 040540 520 RHGHSSAPIIHCEGEDSV-----------------------TQTTTM----ATIGYMAPEYGSEGIVSAKCDVYSYGVLL 572 (669)
Q Consensus 520 h~~~~~~~i~h~d~~~~~-----------------------~~~~~~----gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil 572 (669)
+ +...||||+..-. ...... --..|||||.+.++.++.|+|||||||++
T Consensus 819 e----~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVll 894 (1025)
T KOG1095|consen 819 E----SKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLL 894 (1025)
T ss_pred H----hCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHH
Confidence 8 4579999987210 000111 12589999999999999999999999999
Q ss_pred HHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHH
Q 040540 573 METFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAA 651 (669)
Q Consensus 573 ~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~ 651 (669)
||++| |..||.+....+ -+..|+..+ |.+.+..|+..+.++|..||+.+|++||++.+++
T Consensus 895 WEifslG~~PY~~~~n~~-v~~~~~~gg------------------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~ 955 (1025)
T KOG1095|consen 895 WEIFSLGATPYPSRSNFE-VLLDVLEGG------------------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIV 955 (1025)
T ss_pred HHHHhCCCCCCCCcchHH-HHHHHHhCC------------------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHH
Confidence 99999 788997743211 122222221 2334667888899999999999999999999999
Q ss_pred HHHHHhHHHhh
Q 040540 652 AKLKKIKVKFL 662 (669)
Q Consensus 652 ~~l~~~~~~~~ 662 (669)
+.+..+..-..
T Consensus 956 ~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 956 EQDPAISNAAL 966 (1025)
T ss_pred hhhhhhhhhhc
Confidence 99999876653
No 25
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=3.5e-27 Score=217.99 Aligned_cols=186 Identities=17% Similarity=0.208 Sum_probs=144.6
Q ss_pred cccCchhhhhhccccccccceecc-ccccccc-cceeeccCCCCChHHhhhc---CCCccCHHHHHHHHHhHHhhhhhhh
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIIS-SCSNPDF-KALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLR 520 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~-~~~~~~~-~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh 520 (669)
.++...|+.++++++|||||++++ .+..+.. .+||||||..|+|.+.++. .+..+++....+++.|.++||..+|
T Consensus 62 rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH 141 (375)
T KOG0591|consen 62 RQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCH 141 (375)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHh
Confidence 456678999999999999999998 4444555 7899999999999999974 4456899999999999999999999
Q ss_pred cCCCCCCeeecCCCCc-------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHH
Q 040540 521 HGHSSAPIIHCEGEDS-------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMET 575 (669)
Q Consensus 521 ~~~~~~~i~h~d~~~~-------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el 575 (669)
..-.+..|+|||+|+. ....+.+|||.||+||.+.+..|+.|+||||+||++|||
T Consensus 142 ~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEM 221 (375)
T KOG0591|consen 142 SKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEM 221 (375)
T ss_pred ccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHH
Confidence 6422344999999964 123345799999999999999999999999999999999
Q ss_pred HhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhh-HHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 040540 576 FTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAK-MDCLLSIMDLALDCCMESPDKRMHMTDA 650 (669)
Q Consensus 576 ~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~c~~~~P~~Rps~~~v 650 (669)
+.-+.||.+. .-..+.+-+. +.. .+ +.| +..+.++.+++.-|+..||..||+.-..
T Consensus 222 caL~~PF~g~--n~~~L~~KI~---qgd-----~~---------~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~ 278 (375)
T KOG0591|consen 222 CALQSPFYGD--NLLSLCKKIE---QGD-----YP---------PLPDEHYSTDLRELINMCIAVDPEQRPDTVPY 278 (375)
T ss_pred HhcCCCcccc--cHHHHHHHHH---cCC-----CC---------CCcHHHhhhHHHHHHHHHccCCcccCCCcchH
Confidence 9999999763 1111111111 000 01 113 5677889999999999999999984333
No 26
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.4e-27 Score=244.07 Aligned_cols=194 Identities=27% Similarity=0.405 Sum_probs=156.3
Q ss_pred ccccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 445 AFRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 445 ~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
..+.|..|..+|++++|+|||+++|.+......++|||+|+||+|.++|++.+..++..++..++.+.|+||+|||.
T Consensus 204 ~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~--- 280 (474)
T KOG0194|consen 204 QIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHS--- 280 (474)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHH---
Confidence 34578899999999999999999999999999999999999999999999876679999999999999999999994
Q ss_pred CCCeeecCCCCc--------c-ccc----------------ccccccccCccccccCCCcCccccchhhHHHHHHHHh-C
Q 040540 525 SAPIIHCEGEDS--------V-TQT----------------TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-R 578 (669)
Q Consensus 525 ~~~i~h~d~~~~--------~-~~~----------------~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g 578 (669)
..+||||+..- . ... ...--..|+|||.+....|+.|+|||||||++||+.+ |
T Consensus 281 -k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g 359 (474)
T KOG0194|consen 281 -KNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENG 359 (474)
T ss_pred -CCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccC
Confidence 47999998621 0 000 0012268999999999999999999999999999999 8
Q ss_pred CCCCCcCCCCCccHHHHH-HHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 579 KRPTDEMFTGEMSLRRWV-KESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
..||.++. ...+..++ ....+. +.+...+..+..++.+||..+|++||+|.+|.+.++.+
T Consensus 360 ~~Py~g~~--~~~v~~kI~~~~~r~-----------------~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~ 420 (474)
T KOG0194|consen 360 AEPYPGMK--NYEVKAKIVKNGYRM-----------------PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEAL 420 (474)
T ss_pred CCCCCCCC--HHHHHHHHHhcCccC-----------------CCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHH
Confidence 88997743 22344444 222221 11223345677888999999999999999999999998
Q ss_pred HHHh
Q 040540 658 KVKF 661 (669)
Q Consensus 658 ~~~~ 661 (669)
....
T Consensus 421 ~~~~ 424 (474)
T KOG0194|consen 421 EKKK 424 (474)
T ss_pred Hhcc
Confidence 7653
No 27
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.93 E-value=4.3e-27 Score=239.22 Aligned_cols=201 Identities=21% Similarity=0.389 Sum_probs=158.0
Q ss_pred CcccccccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhh
Q 040540 441 PSSLAFRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLR 520 (669)
Q Consensus 441 p~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh 520 (669)
|+.-..+.|..|+..+++-+|.||+=+.|+|..+.. .||.-+|.+-+|+.+|+.....++..+...|+.|||+|+.|||
T Consensus 427 pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLH 505 (678)
T KOG0193|consen 427 PTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLH 505 (678)
T ss_pred CCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhh
Confidence 333366789999999999999999999999999988 8999999999999999987777888899999999999999999
Q ss_pred cCCCCCCeeecCCCCcc---------------------------cccccccccccCccccccC---CCcCccccchhhHH
Q 040540 521 HGHSSAPIIHCEGEDSV---------------------------TQTTTMATIGYMAPEYGSE---GIVSAKCDVYSYGV 570 (669)
Q Consensus 521 ~~~~~~~i~h~d~~~~~---------------------------~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~Gv 570 (669)
.+.|||+|+|... .....-|..-|||||+++. ..|+..+|||||||
T Consensus 506 ----AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGi 581 (678)
T KOG0193|consen 506 ----AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGI 581 (678)
T ss_pred ----hhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhH
Confidence 4589999998531 0011125678999998754 56999999999999
Q ss_pred HHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 040540 571 LLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650 (669)
Q Consensus 571 il~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v 650 (669)
|+|||+||..||....++.+. |+.. +-...+.+.. ...++..++.+++..||..+|++||.+.++
T Consensus 582 V~YELltg~lPysi~~~dqIi---fmVG------rG~l~pd~s~------~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~i 646 (678)
T KOG0193|consen 582 VWYELLTGELPYSIQNRDQII---FMVG------RGYLMPDLSK------IRSNCPKAMKRLLSDCWKFDREERPLFPQL 646 (678)
T ss_pred HHHHHHhCcCCcCCCChhheE---EEec------ccccCccchh------hhccCHHHHHHHHHHHHhcCcccCccHHHH
Confidence 999999999999853333321 1100 0000111111 134667789999999999999999999999
Q ss_pred HHHHHHhHHHh
Q 040540 651 AAKLKKIKVKF 661 (669)
Q Consensus 651 ~~~l~~~~~~~ 661 (669)
+.+|+.+.++.
T Consensus 647 l~~l~~l~~~~ 657 (678)
T KOG0193|consen 647 LSKLEELLPSL 657 (678)
T ss_pred HHHHHHhhhcc
Confidence 99999887753
No 28
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.93 E-value=5.4e-26 Score=227.91 Aligned_cols=188 Identities=22% Similarity=0.351 Sum_probs=148.3
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..+..++|||++++++.+...+..++||||+++|+|.+++......+++.+...++.++++|++|||. .
T Consensus 51 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~----~ 126 (266)
T cd05064 51 RGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSE----M 126 (266)
T ss_pred HHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 356678999999999999999999998889999999999999999998755678999999999999999999994 4
Q ss_pred CeeecCCCCccc------------------------c--cccccccccCccccccCCCcCccccchhhHHHHHHHHh-CC
Q 040540 527 PIIHCEGEDSVT------------------------Q--TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RK 579 (669)
Q Consensus 527 ~i~h~d~~~~~~------------------------~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~ 579 (669)
+++|||+++... . ....++..|+|||++.+..++.++|||||||++||+++ |+
T Consensus 127 ~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~ 206 (266)
T cd05064 127 GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGE 206 (266)
T ss_pred CEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCC
Confidence 799999984310 0 01124568999999988889999999999999999775 99
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
.||..... ..+...+..... .+.+..++..+.+++.+||+.+|++||++.++.+.|+++
T Consensus 207 ~p~~~~~~--~~~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 207 RPYWDMSG--QDVIKAVEDGFR-----------------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCcCcCCH--HHHHHHHHCCCC-----------------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 99976321 112222221110 011223445678999999999999999999999998765
No 29
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.2e-26 Score=237.67 Aligned_cols=185 Identities=23% Similarity=0.315 Sum_probs=146.8
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCcc--CHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFL--DILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l--~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
+....|+..-+.++|.|||+++|.|...++..|.||.+|||+|.++|+..=.++ .+.+.--+.+||.+||.|||..
T Consensus 617 QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen-- 694 (1226)
T KOG4279|consen 617 QPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN-- 694 (1226)
T ss_pred ccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc--
Confidence 455678999999999999999999999999999999999999999999754455 5566667889999999999954
Q ss_pred CCCeeecCCCCc--------------------------ccccccccccccCccccccCC--CcCccccchhhHHHHHHHH
Q 040540 525 SAPIIHCEGEDS--------------------------VTQTTTMATIGYMAPEYGSEG--IVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 525 ~~~i~h~d~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~s~Gvil~el~ 576 (669)
.|+|||+|.. ....++.||.-|||||+++.+ .|+.++|||||||++.||.
T Consensus 695 --~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMA 772 (1226)
T KOG4279|consen 695 --KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMA 772 (1226)
T ss_pred --ceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeec
Confidence 7999999943 012234599999999999874 5999999999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
||++||-+.......+. +.+ +.+ +-|. -+.+...++..++.+|...||.+||+++++++
T Consensus 773 TGrPPF~ElgspqAAMF---kVG----myK-vHP~---------iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 773 TGRPPFVELGSPQAAMF---KVG----MYK-VHPP---------IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred cCCCCeeecCChhHhhh---hhc----cee-cCCC---------CcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 99999977543222111 111 111 1111 25567788999999999999999999999876
No 30
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.93 E-value=7.7e-26 Score=235.23 Aligned_cols=191 Identities=21% Similarity=0.382 Sum_probs=144.4
Q ss_pred ccCchhhhhhccc-cccccceecccccccc-ccceeeccCCCCChHHhhhcCC---------------------------
Q 040540 447 RSFDSECEVLRNV-RHRNLIKIISSCSNPD-FKALVLEFMPNGSLEKWLYSHN--------------------------- 497 (669)
Q Consensus 447 ~~~~~e~~~l~~l-~h~niv~l~~~~~~~~-~~~lv~ey~~~g~L~~~l~~~~--------------------------- 497 (669)
+.+..|+.++..+ +|||+++++++|.... ..+++|||+++|+|.+++....
T Consensus 55 ~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (338)
T cd05102 55 KALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVD 134 (338)
T ss_pred HHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccc
Confidence 3466789999988 8999999999887644 5789999999999999987421
Q ss_pred ----------------------------------CccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCccc-----
Q 040540 498 ----------------------------------YFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVT----- 538 (669)
Q Consensus 498 ----------------------------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~~~----- 538 (669)
.++.+.+...++.|+++|++|||. .+|+|||+|+...
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~----~~ivHrDiKp~Nil~~~~ 210 (338)
T cd05102 135 RRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLAS----RKCIHRDLAARNILLSEN 210 (338)
T ss_pred cccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHH----CCEECCCCccceEEEcCC
Confidence 236777888999999999999994 4899999995410
Q ss_pred ----------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-CCCCCCcCCCCCccHHHH
Q 040540 539 ----------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRW 595 (669)
Q Consensus 539 ----------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~ 595 (669)
.....++..|||||++.+..++.++|||||||++|||+| |+.||....... .+...
T Consensus 211 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~~ 289 (338)
T cd05102 211 NVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQR 289 (338)
T ss_pred CcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHH
Confidence 001124578999999988889999999999999999997 999987532211 11111
Q ss_pred HHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhHH
Q 040540 596 VKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIKV 659 (669)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~~ 659 (669)
+...... ..+...+..+.+++.+||+.||++||||.|++++|+++..
T Consensus 290 ~~~~~~~-----------------~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 290 LKDGTRM-----------------RAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HhcCCCC-----------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1111000 0012334567899999999999999999999999998764
No 31
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.92 E-value=3.6e-27 Score=245.42 Aligned_cols=192 Identities=22% Similarity=0.415 Sum_probs=162.0
Q ss_pred cccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
.++|..|..+|.+..||||+++.|.......++||.|||.+|+|..+|+.+...+.+.+...+.++||.|++||- .
T Consensus 674 rrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLs----d 749 (996)
T KOG0196|consen 674 RRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLS----D 749 (996)
T ss_pred HhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHh----h
Confidence 468899999999999999999999999999999999999999999999988778999999999999999999995 5
Q ss_pred CCeeecCCCCc--------------------------cccccccc--ccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 526 APIIHCEGEDS--------------------------VTQTTTMA--TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 526 ~~i~h~d~~~~--------------------------~~~~~~~g--t~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
.+.+|||+..- ...++..| -.+|.|||.+..++++.++|||||||++||+++
T Consensus 750 m~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmS 829 (996)
T KOG0196|consen 750 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 829 (996)
T ss_pred cCchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecc
Confidence 68999997621 11112222 258999999999999999999999999999987
Q ss_pred -CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHH
Q 040540 578 -RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKK 656 (669)
Q Consensus 578 -g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~ 656 (669)
|..||.++..++ +...+ .+++|.|.+.+|+..+.++|+.||++|=.+||++.+|+.+|.+
T Consensus 830 yGERPYWdmSNQd--VIkaI-----------------e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDk 890 (996)
T KOG0196|consen 830 YGERPYWDMSNQD--VIKAI-----------------EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDK 890 (996)
T ss_pred cCCCcccccchHH--HHHHH-----------------HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 999998865322 11111 1235567788999999999999999999999999999999999
Q ss_pred hHHH
Q 040540 657 IKVK 660 (669)
Q Consensus 657 ~~~~ 660 (669)
+.+.
T Consensus 891 lIrn 894 (996)
T KOG0196|consen 891 LIRN 894 (996)
T ss_pred HhcC
Confidence 8654
No 32
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.92 E-value=2.7e-26 Score=207.87 Aligned_cols=187 Identities=19% Similarity=0.260 Sum_probs=149.1
Q ss_pred ccccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 445 AFRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 445 ~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
.++.+.+|+.+.+.++||||+++...+....+.++|+|+|.+++|..-|-.+ ...++...-.++.||..++.|+|.
T Consensus 53 ~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~--- 128 (355)
T KOG0033|consen 53 DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHS--- 128 (355)
T ss_pred cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 4567788999999999999999999999999999999999999998766533 456777778899999999999994
Q ss_pred CCCeeecCCCCc---------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 525 SAPIIHCEGEDS---------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 525 ~~~i~h~d~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
++|+|||+|+. ......+|||+|||||+.....|+.++|||+.|||||-++.
T Consensus 129 -n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~ 207 (355)
T KOG0033|consen 129 -NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 207 (355)
T ss_pred -cCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHh
Confidence 58999999954 11223469999999999999999999999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|..||.+.. ...+-+-+..+- .| ...++|+...+.+.+++.+|+..||++|-|+.|+++
T Consensus 208 G~~PF~~~~--~~rlye~I~~g~-------yd-------~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 208 GYPPFWDED--QHRLYEQIKAGA-------YD-------YPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred CCCCCCCcc--HHHHHHHHhccc-------cC-------CCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 999997621 111111111100 00 112346677788899999999999999999998875
No 33
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=6.4e-26 Score=232.70 Aligned_cols=180 Identities=22% Similarity=0.259 Sum_probs=148.1
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+.+|+.+|+-+.|||++.+++.+.+....|+|.||+++|.|++++.++ .++.+.+..+++.||..|+.|+|+. .
T Consensus 58 ~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~k-G~l~e~eaa~ff~QIi~gv~yCH~~----~ 132 (786)
T KOG0588|consen 58 GIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRK-GPLPEREAAHFFRQILDGVSYCHAF----N 132 (786)
T ss_pred chhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHhhh----c
Confidence 4567999999999999999999999999999999999999999999864 5688899999999999999999954 7
Q ss_pred eeecCCCCc------------------------ccccccccccccCccccccCCCcC-ccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDS------------------------VTQTTTMATIGYMAPEYGSEGIVS-AKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~------------------------~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
|+|||+|+. ....+.+|++.|.|||++.+..|. .++||||.|||||.++||+.||
T Consensus 133 icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPF 212 (786)
T KOG0588|consen 133 ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPF 212 (786)
T ss_pred ceeccCCchhhhhhcccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCC
Confidence 999999953 112345799999999999998764 7999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
++.. ...+..-|+.+. |.-+...+.++++++.+|+..||+.|-|++||.+
T Consensus 213 dDdN--ir~LLlKV~~G~------------------f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 213 DDDN--IRVLLLKVQRGV------------------FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred CCcc--HHHHHHHHHcCc------------------ccCCCcCCHHHHHHHHHHhccCccccccHHHHhh
Confidence 8521 111222222211 1124456678899999999999999999999976
No 34
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.92 E-value=4.4e-26 Score=233.50 Aligned_cols=184 Identities=22% Similarity=0.371 Sum_probs=147.0
Q ss_pred cccCchhhhhhccccccccceeccccccccc--cceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPDF--KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
.+.|..|+.+++.++|+||++++.++..... ..+|.|.|..|+|..|.++++ .+......+.++||.+||.|||..
T Consensus 85 leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~-~vn~kaik~W~RQILkGL~yLHs~- 162 (632)
T KOG0584|consen 85 LERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHR-RVNIKAIKSWCRQILKGLVYLHSQ- 162 (632)
T ss_pred HHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhc-cCCHHHHHHHHHHHHHHhhhhhcC-
Confidence 3567889999999999999999998877554 667889999999999998754 478888899999999999999965
Q ss_pred CCCCeeecCCCCc------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCC
Q 040540 524 SSAPIIHCEGEDS------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 524 ~~~~i~h~d~~~~------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~ 579 (669)
.|||||||+|=. ....+.+|||.|||||++. ..|.+.+||||||..++||+|+.
T Consensus 163 -~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~e 240 (632)
T KOG0584|consen 163 -DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSE 240 (632)
T ss_pred -CCCccccccccceEEEcCCcCceeecchhHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhcc
Confidence 789999999811 1233457999999999987 67999999999999999999999
Q ss_pred CCCCcCCCCCccHHHHHHHhC-CCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 580 RPTDEMFTGEMSLRRWVKESL-PHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
.||.+-. ....+-.-|..+. |..+.++-| +.+.+||.+|+.. .++|||+.|+++
T Consensus 241 YPYsEC~-n~AQIYKKV~SGiKP~sl~kV~d-----------------Pevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 241 YPYSECT-NPAQIYKKVTSGIKPAALSKVKD-----------------PEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred CChhhhC-CHHHHHHHHHcCCCHHHhhccCC-----------------HHHHHHHHHHhcC-chhccCHHHHhh
Confidence 9998743 2222323333332 333333322 3578999999999 899999999876
No 35
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=3.6e-26 Score=231.48 Aligned_cols=192 Identities=24% Similarity=0.362 Sum_probs=153.8
Q ss_pred cccccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcC
Q 040540 444 LAFRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHG 522 (669)
Q Consensus 444 ~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~ 522 (669)
+...+|..|..+|..++|||+|+++|.|......|||.|||.+|+|.++|++.. ..++-.-.+.++-||+.|++||.
T Consensus 305 MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE-- 382 (1157)
T KOG4278|consen 305 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE-- 382 (1157)
T ss_pred hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH--
Confidence 346789999999999999999999999999999999999999999999999733 34555566778899999999996
Q ss_pred CCCCCeeecCCCCc-----------------------ccccc---cccccccCccccccCCCcCccccchhhHHHHHHHH
Q 040540 523 HSSAPIIHCEGEDS-----------------------VTQTT---TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 523 ~~~~~i~h~d~~~~-----------------------~~~~~---~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~ 576 (669)
.+.+||||+..- ...+. ..--..|.|||-+....++-|+|||+|||+|||+.
T Consensus 383 --kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIA 460 (1157)
T KOG4278|consen 383 --KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIA 460 (1157)
T ss_pred --HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHH
Confidence 457999997621 01111 11235799999999999999999999999999999
Q ss_pred h-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHH
Q 040540 577 T-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655 (669)
Q Consensus 577 t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~ 655 (669)
| |-.||.+... .+ + ..+....+|+..+..|++.+.++|..||+.+|++||++.|+-+.++
T Consensus 461 TYGMsPYPGidl-----Sq---------V-----Y~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafE 521 (1157)
T KOG4278|consen 461 TYGMSPYPGIDL-----SQ---------V-----YGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFE 521 (1157)
T ss_pred hcCCCCCCCccH-----HH---------H-----HHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence 8 7788865321 11 0 1123334556667889999999999999999999999999999988
Q ss_pred HhH
Q 040540 656 KIK 658 (669)
Q Consensus 656 ~~~ 658 (669)
.+-
T Consensus 522 tmf 524 (1157)
T KOG4278|consen 522 TMF 524 (1157)
T ss_pred HHh
Confidence 753
No 36
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.92 E-value=5.1e-26 Score=226.98 Aligned_cols=186 Identities=31% Similarity=0.494 Sum_probs=138.8
Q ss_pred cccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
...+..|+..+.+++|||+++++|+|......++|+||+++|+|.++++.. ...+++..+..|+.|+++|+.|||..
T Consensus 45 ~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-- 122 (259)
T PF07714_consen 45 EEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN-- 122 (259)
T ss_dssp HHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT--
T ss_pred ceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence 356778999999999999999999999777789999999999999999876 56789999999999999999999953
Q ss_pred CCCeeecCCCCcc-------------------c--------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 525 SAPIIHCEGEDSV-------------------T--------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 525 ~~~i~h~d~~~~~-------------------~--------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
+++|+++.... . .....+...|+|||...+..++.|+||||||+++|||+|
T Consensus 123 --~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~ 200 (259)
T PF07714_consen 123 --NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILT 200 (259)
T ss_dssp --TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHT
T ss_pred --cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 79999987420 0 011235678999999988889999999999999999999
Q ss_pred -CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 040540 578 -RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKL 654 (669)
Q Consensus 578 -g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l 654 (669)
|+.||... ....+...+..... .+.+..++..+.+++.+||..+|++||+|.++++.|
T Consensus 201 ~~~~p~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 201 LGKFPFSDY--DNEEIIEKLKQGQR-----------------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TSSGTTTTS--CHHHHHHHHHTTEE-----------------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ccccccccc--cccccccccccccc-----------------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 67888653 12222222211110 011223345678999999999999999999999876
No 37
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.4e-25 Score=221.95 Aligned_cols=188 Identities=20% Similarity=0.224 Sum_probs=144.5
Q ss_pred hhhhhhcccc-ccccceecccccccc-ccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 451 SECEVLRNVR-HRNLIKIISSCSNPD-FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 451 ~e~~~l~~l~-h~niv~l~~~~~~~~-~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
+|+..++++. ||||+++...+.+.+ ..++|||||++ +|++++++++..+++.+..+|+.||.+||+|+|. +++
T Consensus 57 REvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk----~Gf 131 (538)
T KOG0661|consen 57 REVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHK----HGF 131 (538)
T ss_pred HHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHh----cCc
Confidence 5888899998 999999999998876 88999999985 9999999988899999999999999999999994 589
Q ss_pred eecCCCCc------------------------ccccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 529 IHCEGEDS------------------------VTQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 529 ~h~d~~~~------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
+|||+|+. ...+..+.|..|.|||++.+ +.|+.+.|+||+|||++|+.+-++-|.
T Consensus 132 FHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFP 211 (538)
T KOG0661|consen 132 FHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFP 211 (538)
T ss_pred ccccCChhheEecccceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCC
Confidence 99999954 12345578999999998765 669999999999999999999987775
Q ss_pred cCCCCCc--------------------cHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCC
Q 040540 584 EMFTGEM--------------------SLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDK 643 (669)
Q Consensus 584 ~~~~~~~--------------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~ 643 (669)
+..+-+. .+...+.-.+|.....-++. .-..+..++.+++.+|++.||++
T Consensus 212 G~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~----------L~p~~s~~~~~li~~ll~WDP~k 281 (538)
T KOG0661|consen 212 GASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKD----------LLPNASSEAASLIERLLAWDPDK 281 (538)
T ss_pred CCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHH----------hCcccCHHHHHHHHHHhcCCCcc
Confidence 5321110 01111111111111100000 01126677889999999999999
Q ss_pred CCCHHHHHHH
Q 040540 644 RMHMTDAAAK 653 (669)
Q Consensus 644 Rps~~~v~~~ 653 (669)
|||+.++++.
T Consensus 282 RpTA~~al~~ 291 (538)
T KOG0661|consen 282 RPTASQALQH 291 (538)
T ss_pred CccHHHHhcC
Confidence 9999999873
No 38
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.92 E-value=3.1e-25 Score=214.47 Aligned_cols=175 Identities=23% Similarity=0.224 Sum_probs=138.9
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
...+|..++..++||.+|+++..++..+..|+|+||+.||.|+-.|.+++. +++....-++.+|+-||.|||. .+
T Consensus 71 ~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH~----~g 145 (357)
T KOG0598|consen 71 HTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLHS----KG 145 (357)
T ss_pred HHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHHh----CC
Confidence 455788999999999999999999999999999999999999999986554 5666555678899999999994 58
Q ss_pred eeecCCCCc-------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDS-------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~-------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
|||||+|+. ....+.+||+.|||||++.+..|+..+|+||+||++|||++|.+||
T Consensus 146 IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF 225 (357)
T KOG0598|consen 146 IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPF 225 (357)
T ss_pred eeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCC
Confidence 999999953 1233458999999999999999999999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH 646 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps 646 (669)
.... ..++.+.-...+.. ..+.-....+.+++.+.+.+||++|-.
T Consensus 226 ~~~~-----~~~~~~~I~~~k~~--------------~~p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 226 YAED-----VKKMYDKILKGKLP--------------LPPGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred cCcc-----HHHHHHHHhcCcCC--------------CCCccCCHHHHHHHHHHhccCHHHhcC
Confidence 7632 23333322222100 001123446789999999999999963
No 39
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=3.3e-25 Score=228.07 Aligned_cols=178 Identities=23% Similarity=0.284 Sum_probs=143.1
Q ss_pred Cchhhhhhcccc-ccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 449 FDSECEVLRNVR-HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 449 ~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
..+|+.+++.++ ||||++++..+......++||||+.+|+|++++.+ ...+.+.+..+++.|++.|++|+| +.+
T Consensus 66 i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H----~~g 140 (370)
T KOG0583|consen 66 IKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCH----SRG 140 (370)
T ss_pred hHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHH----hCC
Confidence 347899999999 99999999999998889999999999999999997 566888899999999999999999 458
Q ss_pred eeecCCCCc--------------------------ccccccccccccCccccccCCC-cC-ccccchhhHHHHHHHHhCC
Q 040540 528 IIHCEGEDS--------------------------VTQTTTMATIGYMAPEYGSEGI-VS-AKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 528 i~h~d~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~~-~~-~~~Dv~s~Gvil~el~tg~ 579 (669)
|+|||+|.. ....+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|+
T Consensus 141 i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~ 220 (370)
T KOG0583|consen 141 IVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGR 220 (370)
T ss_pred EeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCC
Confidence 999999932 1123457999999999999866 75 7899999999999999999
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHH-HHHHHHHHhhcccCCCCCCCCHHHHH
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDC-LLSIMDLALDCCMESPDKRMHMTDAA 651 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~c~~~~P~~Rps~~~v~ 651 (669)
.||++. ....+..-+... ...+ +... ..++..++.+|+..||.+|+++.+|+
T Consensus 221 ~PF~d~--~~~~l~~ki~~~----------------~~~~--p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 221 LPFDDS--NVPNLYRKIRKG----------------EFKI--PSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred CCCCCc--cHHHHHHHHhcC----------------CccC--CCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 999872 111111111110 0001 1112 56788999999999999999999998
No 40
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.92 E-value=7e-25 Score=222.96 Aligned_cols=191 Identities=26% Similarity=0.446 Sum_probs=149.1
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC---------------CccCHHHHHHHHHh
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMID 511 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ 511 (669)
+.+..|+..++.++|+|++++++++......++||||+++++|.+++.... ..+++..+.+++.+
T Consensus 52 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (291)
T cd05094 52 KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 131 (291)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHH
Confidence 356678999999999999999999998888999999999999999997532 24788999999999
Q ss_pred HHhhhhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCcccc
Q 040540 512 VGSALEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCD 564 (669)
Q Consensus 512 i~~~l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~D 564 (669)
+++|++|||. .+++|+|+++... .....|+..|+|||+..+..++.++|
T Consensus 132 i~~al~~lH~----~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 207 (291)
T cd05094 132 IASGMVYLAS----QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD 207 (291)
T ss_pred HHHHHHHHHh----CCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhh
Confidence 9999999994 4799999985410 01123567899999998888999999
Q ss_pred chhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCC
Q 040540 565 VYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDK 643 (669)
Q Consensus 565 v~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~ 643 (669)
||||||++|||+| |+.||..... ..+.+...... ... .+..++..+.+++.+||+.+|++
T Consensus 208 i~slG~il~el~t~g~~p~~~~~~--~~~~~~~~~~~---~~~--------------~~~~~~~~~~~li~~~l~~~P~~ 268 (291)
T cd05094 208 VWSFGVILWEIFTYGKQPWFQLSN--TEVIECITQGR---VLE--------------RPRVCPKEVYDIMLGCWQREPQQ 268 (291)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhCCC---CCC--------------CCccCCHHHHHHHHHHcccChhh
Confidence 9999999999999 9999865321 11222211111 000 01123456789999999999999
Q ss_pred CCCHHHHHHHHHHhHHH
Q 040540 644 RMHMTDAAAKLKKIKVK 660 (669)
Q Consensus 644 Rps~~~v~~~l~~~~~~ 660 (669)
||++.+|+++|+++...
T Consensus 269 Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 269 RLNIKEIYKILHALGKA 285 (291)
T ss_pred CcCHHHHHHHHHHHHhh
Confidence 99999999999998654
No 41
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.92 E-value=6.4e-25 Score=230.56 Aligned_cols=189 Identities=20% Similarity=0.354 Sum_probs=144.5
Q ss_pred cCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCC-----------------------------
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN----------------------------- 497 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----------------------------- 497 (669)
.+..|+.+++.+ +|+|+++++++|......++||||+++|+|.++++...
T Consensus 87 ~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (374)
T cd05106 87 ALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKY 166 (374)
T ss_pred HHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccc
Confidence 456789999988 89999999999999999999999999999999986421
Q ss_pred ----------------------------------------CccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCcc
Q 040540 498 ----------------------------------------YFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSV 537 (669)
Q Consensus 498 ----------------------------------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~~ 537 (669)
..+++....+|+.|+++|++|||. .+++|||+|+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~----~giiHrDLkp~N 242 (374)
T cd05106 167 IRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS----KNCIHRDVAARN 242 (374)
T ss_pred ccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH----CCEEeccCchhe
Confidence 236777889999999999999994 489999999541
Q ss_pred c-----------------------c----cccccccccCccccccCCCcCccccchhhHHHHHHHHh-CCCCCCcCCCCC
Q 040540 538 T-----------------------Q----TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGE 589 (669)
Q Consensus 538 ~-----------------------~----~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~ 589 (669)
. . ....++..|||||++.+..++.++|||||||++|||++ |+.||.......
T Consensus 243 il~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~ 322 (374)
T cd05106 243 VLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS 322 (374)
T ss_pred EEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH
Confidence 0 0 01123457999999988889999999999999999997 999987532211
Q ss_pred ccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhH
Q 040540 590 MSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIK 658 (669)
Q Consensus 590 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~ 658 (669)
.+...+....+... +...+.++.+++.+||+.||++||++.+|+++|+++.
T Consensus 323 -~~~~~~~~~~~~~~-----------------~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 323 -KFYKMVKRGYQMSR-----------------PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred -HHHHHHHcccCccC-----------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 11111111111100 1112346789999999999999999999999999863
No 42
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.92 E-value=6e-25 Score=222.61 Aligned_cols=187 Identities=22% Similarity=0.462 Sum_probs=147.3
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC---------------CccCHHHHHHHHHhH
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDV 512 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i 512 (669)
.+.+|+..+..++|+|++++++++......+++|||+++|+|.+++.... ..+++.....++.++
T Consensus 54 ~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 133 (283)
T cd05048 54 EFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQI 133 (283)
T ss_pred HHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHH
Confidence 46678999999999999999999988888899999999999999997531 347788899999999
Q ss_pred HhhhhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccccc
Q 040540 513 GSALEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCDV 565 (669)
Q Consensus 513 ~~~l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv 565 (669)
++|+.|||. .+++|+|+++... .....+++.|+|||.+....++.++||
T Consensus 134 ~~al~~lH~----~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv 209 (283)
T cd05048 134 AAGMEYLSS----HHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDI 209 (283)
T ss_pred HHHHHHHHh----CCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhH
Confidence 999999995 4799999985310 011235678999999988889999999
Q ss_pred hhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCC
Q 040540 566 YSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644 (669)
Q Consensus 566 ~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~R 644 (669)
|||||++|||+| |..||..... ..+...+...... +.+..++..+.+++.+||+.||++|
T Consensus 210 ~slG~il~el~~~g~~p~~~~~~--~~~~~~i~~~~~~-----------------~~~~~~~~~~~~l~~~c~~~~p~~R 270 (283)
T cd05048 210 WSFGVVLWEIFSYGLQPYYGFSN--QEVIEMIRSRQLL-----------------PCPEDCPARVYALMIECWNEIPARR 270 (283)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHcCCcC-----------------CCcccCCHHHHHHHHHHccCChhhC
Confidence 999999999998 9999875332 1222222211100 1123445678899999999999999
Q ss_pred CCHHHHHHHHHHh
Q 040540 645 MHMTDAAAKLKKI 657 (669)
Q Consensus 645 ps~~~v~~~l~~~ 657 (669)
|++.||.+.|+.+
T Consensus 271 p~~~~i~~~l~~~ 283 (283)
T cd05048 271 PRFKDIHTRLRSW 283 (283)
T ss_pred cCHHHHHHHHhcC
Confidence 9999999999753
No 43
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.92 E-value=6.8e-25 Score=220.81 Aligned_cols=182 Identities=20% Similarity=0.312 Sum_probs=141.1
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|...++.++|+|+++++++|......++||||+++|+|..++++....+++..+..++.|+++|++|||+ .+
T Consensus 62 ~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~----~~ 137 (274)
T cd05076 62 AFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLED----KN 137 (274)
T ss_pred HHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHc----CC
Confidence 46667888899999999999999999889999999999999999997655678999999999999999999994 47
Q ss_pred eeecCCCCcccc----------------------------cccccccccCccccccC-CCcCccccchhhHHHHHHH-Hh
Q 040540 528 IIHCEGEDSVTQ----------------------------TTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMET-FT 577 (669)
Q Consensus 528 i~h~d~~~~~~~----------------------------~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el-~t 577 (669)
++|+|+|+.... ....++..|+|||.+.+ ..++.++|||||||++||+ ++
T Consensus 138 iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~ 217 (274)
T cd05076 138 LVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFD 217 (274)
T ss_pred ccCCCCCcccEEEeccCcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 999999854210 01125778999998865 5589999999999999999 57
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKL 654 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l 654 (669)
|+.||...... ....+..... .+ +......+.+++.+||+.+|++||+|.+|++.|
T Consensus 218 g~~p~~~~~~~--~~~~~~~~~~----------~~---------~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 218 GEVPLKERTPS--EKERFYEKKH----------RL---------PEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred CCCCccccChH--HHHHHHHhcc----------CC---------CCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 89998653221 1111111110 00 001123578999999999999999999999876
No 44
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.92 E-value=8e-25 Score=218.18 Aligned_cols=185 Identities=23% Similarity=0.354 Sum_probs=144.3
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+..++.++|||++++++++......+++|||+++|+|.++++.....+++..+..++.+++.|++|||+ .
T Consensus 44 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~----~ 119 (256)
T cd05114 44 EDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLER----N 119 (256)
T ss_pred HHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 356779999999999999999999998889999999999999999998655568999999999999999999995 4
Q ss_pred CeeecCCCCccc--------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-CC
Q 040540 527 PIIHCEGEDSVT--------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RK 579 (669)
Q Consensus 527 ~i~h~d~~~~~~--------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~ 579 (669)
+++|+|+++... .....++..|+|||+.....++.++||||||+++|||++ |+
T Consensus 120 ~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~ 199 (256)
T cd05114 120 SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGK 199 (256)
T ss_pred CccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCC
Confidence 799999885410 001123457999999988889999999999999999999 89
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKL 654 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l 654 (669)
.||.... .......+...... .. +......+.+++.+||+.+|++||+|.|+++.|
T Consensus 200 ~p~~~~~--~~~~~~~i~~~~~~-----~~------------~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 200 MPFEKKS--NYEVVEMISRGFRL-----YR------------PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCCC--HHHHHHHHHCCCCC-----CC------------CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 9986532 11222222221100 00 111234578999999999999999999999876
No 45
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.92 E-value=8.1e-25 Score=230.03 Aligned_cols=188 Identities=21% Similarity=0.322 Sum_probs=144.4
Q ss_pred cCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCC-----------------------------
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN----------------------------- 497 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----------------------------- 497 (669)
.+..|+.++..+ +|||+++++++|......++||||+++|+|.++++...
T Consensus 84 ~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (375)
T cd05104 84 ALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCD 163 (375)
T ss_pred HHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccch
Confidence 466789999988 89999999999999999999999999999999986421
Q ss_pred ---------------------------------------------CccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecC
Q 040540 498 ---------------------------------------------YFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCE 532 (669)
Q Consensus 498 ---------------------------------------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d 532 (669)
..+++....+++.++++|++|||. .+++|+|
T Consensus 164 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~----~~ivH~D 239 (375)
T cd05104 164 SLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS----KNCIHRD 239 (375)
T ss_pred hhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH----CCeeccC
Confidence 246788889999999999999995 4799999
Q ss_pred CCCccc---------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-CCCCCCc
Q 040540 533 GEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDE 584 (669)
Q Consensus 533 ~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~ 584 (669)
+|+... .....++..|+|||+..+..++.++|||||||++|||+| |..||..
T Consensus 240 lkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~ 319 (375)
T cd05104 240 LAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPG 319 (375)
T ss_pred CchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCC
Confidence 995410 000113457999999988889999999999999999998 8888865
Q ss_pred CCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 585 MFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 585 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
.... .....++....... .+...+.++.+++.+||+.||++||+|.||+++|++.
T Consensus 320 ~~~~-~~~~~~~~~~~~~~-----------------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 320 MPVD-SKFYKMIKEGYRML-----------------SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCch-HHHHHHHHhCccCC-----------------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 3221 12223332221100 0111234678999999999999999999999999863
No 46
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.91 E-value=1.1e-26 Score=246.39 Aligned_cols=362 Identities=29% Similarity=0.430 Sum_probs=232.6
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCccccccccc
Q 040540 52 RVTALNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLD 131 (669)
Q Consensus 52 ~v~~L~ls~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 131 (669)
+++.||++.|.++ ..|..+..+.+|+.|+++.|.+. ..|.+..++++|++|+|.+|.+. .+|..+..+++|++|+++
T Consensus 46 ~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 46 KLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLS 122 (1081)
T ss_pred eeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccc
Confidence 4889999988885 67777888999999999999987 67788899999999999999987 789999999999999999
Q ss_pred ccCccccCCcccCCCCCCC-------------------eeecccccccccCCcccCCCCCCCEEEcccCCCcccCCcccc
Q 040540 132 YNNFTGPIPNSLFNLSRLE-------------------MLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIG 192 (669)
Q Consensus 132 ~n~l~~~~p~~~~~l~~L~-------------------~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~ 192 (669)
.|+|. .+|..+..++.+. .+++..|.+.+.++..+..++. .|+|+.|++... .+.
T Consensus 123 ~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~---dls 196 (1081)
T KOG0618|consen 123 FNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVL---DLS 196 (1081)
T ss_pred hhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhhhh---hhh
Confidence 99986 6665555444444 4444555555556666666655 577777776511 122
Q ss_pred CCC--------------------CCCEEEccCCCCCCCCCccccCCCCCcEEEcccCCCccccchhhhccCCCCCeeecc
Q 040540 193 SLQ--------------------NLKNLDLADNKLSGLIPPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALS 252 (669)
Q Consensus 193 ~l~--------------------~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls 252 (669)
.+. +|+.|+.++|.++...+ -..-.+|+++++++|.++ .+|+++. .+.+|+.++..
T Consensus 197 ~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~-~~~nle~l~~n 272 (1081)
T KOG0618|consen 197 NLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIG-ACANLEALNAN 272 (1081)
T ss_pred hccchhhhhhhhcccceEEecCcchheeeeccCcceeecc--ccccccceeeecchhhhh-cchHHHH-hcccceEeccc
Confidence 222 23333444444432111 112345666666666665 4565555 46666666666
Q ss_pred cCcccccCCccccCCCCCCEEeCCCCCccccCccccCCCCCCCEEEccCCccccCCCCCc---------------cc---
Q 040540 253 TNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTTESSSAD---------------QW--- 314 (669)
Q Consensus 253 ~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~---------------~~--- 314 (669)
+|++ ..+|..+...++|+.++..+|.+. .+|.....+++|++|+|..|++...+.... ..
T Consensus 273 ~N~l-~~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~l 350 (1081)
T KOG0618|consen 273 HNRL-VALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTL 350 (1081)
T ss_pred chhH-HhhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccccc
Confidence 6666 345555556666666666666655 355556667778888887777765443110 00
Q ss_pred -----------------------ccccccCCCCCCCEEECcCCCCccccchhHhhhhccccccceEeecCcccCCCCCcc
Q 040540 315 -----------------------SFLSSLTNCRNLSNLALASNPLGGILPQLIGNFSASLQNIYAFELGFNDLNGTIPTS 371 (669)
Q Consensus 315 -----------------------~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~l~~l~l~~n~l~~~~~~~ 371 (669)
..++.+.+..+|+.|+|++|++.......+ ..+..|+.|++++|+++ .+|.+
T Consensus 351 p~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~----~kle~LeeL~LSGNkL~-~Lp~t 425 (1081)
T KOG0618|consen 351 PSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKL----RKLEELEELNLSGNKLT-TLPDT 425 (1081)
T ss_pred ccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHH----hchHHhHHHhcccchhh-hhhHH
Confidence 112234455666666666666654322222 23455666666666666 45566
Q ss_pred ccccCCCcEEecCCCcccccCchhhcCCCCCCeeeCcCCccceeCcccccCCCCCCEEECCCCc
Q 040540 372 IGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGHIPPCLASLTSLRELHLGSNK 435 (669)
Q Consensus 372 ~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~l~~N~ 435 (669)
+..+..|++|..-+|.+. ..| .+..++.|+.+|+|.|+++...-+.-...++|++|+++||.
T Consensus 426 va~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 426 VANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred HHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 666666666666666655 455 67778888888888888875432222223788888888886
No 47
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.91 E-value=2.8e-25 Score=204.29 Aligned_cols=182 Identities=25% Similarity=0.294 Sum_probs=147.9
Q ss_pred chhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 450 DSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 450 ~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
..|+.+++++ .||+|+.+.+.+..+.+.++|+|.|+.|.|+++|.+ .-.+++.+..+|++++..|++|+|. ..|
T Consensus 70 ~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts-~VtlSEK~tR~iMrqlfegVeylHa----~~I 144 (411)
T KOG0599|consen 70 RQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTS-KVTLSEKETRRIMRQLFEGVEYLHA----RNI 144 (411)
T ss_pred HHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhh-heeecHHHHHHHHHHHHHHHHHHHH----hhh
Confidence 4588888877 699999999999999999999999999999999985 4568999999999999999999994 579
Q ss_pred eecCCCCc------------------------ccccccccccccCccccccC------CCcCccccchhhHHHHHHHHhC
Q 040540 529 IHCEGEDS------------------------VTQTTTMATIGYMAPEYGSE------GIVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 529 ~h~d~~~~------------------------~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~s~Gvil~el~tg 578 (669)
+|||+|+. ......+|||+|.|||.+.. ..|+..+|.||.|||+|-++.|
T Consensus 145 VHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaG 224 (411)
T KOG0599|consen 145 VHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAG 224 (411)
T ss_pred hhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcC
Confidence 99999953 11223469999999998754 3478899999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
.+||... .+..+.+.+.++. . ..+.+.|++...++.+++.+|++.||.+|-|++|+++
T Consensus 225 cpPFwHR--kQmlMLR~ImeGk----y----------qF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 225 CPPFWHR--KQMLMLRMIMEGK----Y----------QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred CCchhHH--HHHHHHHHHHhcc----c----------ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 9999762 2222222221111 0 1234568899999999999999999999999999976
No 48
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.91 E-value=8.2e-25 Score=223.99 Aligned_cols=194 Identities=23% Similarity=0.381 Sum_probs=143.7
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC------------------CccCHHHHHHH
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN------------------YFLDILERLNI 508 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~------------------~~l~~~~~~~i 508 (669)
..+..|+.++.+++|+|++++++++......++||||+++|+|.+++.... ..+++....++
T Consensus 64 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 143 (304)
T cd05096 64 NDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHV 143 (304)
T ss_pred HHHHHHHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHH
Confidence 357789999999999999999999988888999999999999999986421 23677888999
Q ss_pred HHhHHhhhhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCc
Q 040540 509 MIDVGSALEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSA 561 (669)
Q Consensus 509 ~~~i~~~l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~ 561 (669)
+.|+++|+.|||. .+++|+|+|+... .....++..|||||+.....++.
T Consensus 144 ~~~i~~al~~lH~----~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 219 (304)
T cd05096 144 ALQIASGMKYLSS----LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTT 219 (304)
T ss_pred HHHHHHHHHHHHH----CCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCc
Confidence 9999999999995 4799999995410 00112467899999998888999
Q ss_pred cccchhhHHHHHHHHh--CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccC
Q 040540 562 KCDVYSYGVLLMETFT--RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCME 639 (669)
Q Consensus 562 ~~Dv~s~Gvil~el~t--g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~ 639 (669)
++|||||||++|||++ |..||.... ...+...+............ .. .+..++..+.+++.+||+.
T Consensus 220 ~~Dv~slG~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~li~~cl~~ 287 (304)
T cd05096 220 ASDVWAFGVTLWEILMLCKEQPYGELT--DEQVIENAGEFFRDQGRQVY-LF---------RPPPCPQGLYELMLQCWSR 287 (304)
T ss_pred hhhhHHHHHHHHHHHHccCCCCCCcCC--HHHHHHHHHHHhhhcccccc-cc---------CCCCCCHHHHHHHHHHccC
Confidence 9999999999999987 456765432 12222222222111100000 00 0112345678999999999
Q ss_pred CCCCCCCHHHHHHHHHH
Q 040540 640 SPDKRMHMTDAAAKLKK 656 (669)
Q Consensus 640 ~P~~Rps~~~v~~~l~~ 656 (669)
||++||||.+|.+.|++
T Consensus 288 ~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 288 DCRERPSFSDIHAFLTE 304 (304)
T ss_pred CchhCcCHHHHHHHHhC
Confidence 99999999999988863
No 49
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=8.1e-25 Score=222.22 Aligned_cols=187 Identities=21% Similarity=0.291 Sum_probs=150.6
Q ss_pred ccccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 445 AFRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 445 ~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
.+.+|..|++++..++||++|+++++|...+..+|..|||+||-...++-+-+..+...+..-+.++++.||.|||
T Consensus 72 ELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LH---- 147 (1187)
T KOG0579|consen 72 ELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLH---- 147 (1187)
T ss_pred HHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHh----
Confidence 4568889999999999999999999999999999999999999999998877788999999999999999999999
Q ss_pred CCCeeecCCCCc-------------------------ccccccccccccCcccccc-----CCCcCccccchhhHHHHHH
Q 040540 525 SAPIIHCEGEDS-------------------------VTQTTTMATIGYMAPEYGS-----EGIVSAKCDVYSYGVLLME 574 (669)
Q Consensus 525 ~~~i~h~d~~~~-------------------------~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~e 574 (669)
+..|||||+|.. ....+++|||+|||||+.. +..|+.++|||||||+|.|
T Consensus 148 s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIE 227 (1187)
T KOG0579|consen 148 SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIE 227 (1187)
T ss_pred hcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHH
Confidence 458999999843 1234567999999999764 4679999999999999999
Q ss_pred HHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 575 TFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 575 l~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|..+.+|..+... ..+.--+...-| |.+.. +......+.++..+|+.+||..||++.++++
T Consensus 228 MAqiEPPHhelnp--MRVllKiaKSeP--------PTLlq-------PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 228 MAQIEPPHHELNP--MRVLLKIAKSEP--------PTLLQ-------PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred HhccCCCccccch--HHHHHHHhhcCC--------CcccC-------cchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 9999999765321 111111111111 11221 3455566789999999999999999999875
No 50
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.91 E-value=8.1e-25 Score=221.02 Aligned_cols=189 Identities=19% Similarity=0.291 Sum_probs=144.7
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..+.|+|++++++++.. ...++++||+++|+|.+++......+++.....++.|+++|+.|+|. .+
T Consensus 55 ~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~----~~ 129 (279)
T cd05111 55 EITDHMLAMGSLDHAYIVRLLGICPG-ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEE----HR 129 (279)
T ss_pred HHHHHHHHHhcCCCCCcceEEEEECC-CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 45566777888999999999998764 44678999999999999998766678999999999999999999995 47
Q ss_pred eeecCCCCcc--------------c-------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-CC
Q 040540 528 IIHCEGEDSV--------------T-------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RK 579 (669)
Q Consensus 528 i~h~d~~~~~--------------~-------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~ 579 (669)
++|+|+|+.. . .....|+..|+|||+.....++.++|||||||++||++| |+
T Consensus 130 iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~ 209 (279)
T cd05111 130 MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGA 209 (279)
T ss_pred EeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCC
Confidence 9999998531 0 011135678999999988889999999999999999998 99
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhHH
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIKV 659 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~~ 659 (669)
.||..... ..+.+.+....... . +..+...+.+++.+||..+|++|||+.|+++.++.+.+
T Consensus 210 ~p~~~~~~--~~~~~~~~~~~~~~-----~------------~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 210 EPYAGMRP--HEVPDLLEKGERLA-----Q------------PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCCCCCCH--HHHHHHHHCCCcCC-----C------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 99865321 11222222111100 0 11123356789999999999999999999999988765
Q ss_pred H
Q 040540 660 K 660 (669)
Q Consensus 660 ~ 660 (669)
.
T Consensus 271 ~ 271 (279)
T cd05111 271 D 271 (279)
T ss_pred C
Confidence 3
No 51
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.91 E-value=2.3e-24 Score=218.76 Aligned_cols=191 Identities=25% Similarity=0.426 Sum_probs=148.4
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC------------CccCHHHHHHHHHhHHh
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN------------YFLDILERLNIMIDVGS 514 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~------------~~l~~~~~~~i~~~i~~ 514 (669)
..+..|+..+.+++|++++++++++......+++|||+++++|.++++..+ ..+++.....++.+++.
T Consensus 52 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~ 131 (288)
T cd05093 52 KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAA 131 (288)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 356779999999999999999999998899999999999999999997432 24889999999999999
Q ss_pred hhhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccccchh
Q 040540 515 ALEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYS 567 (669)
Q Consensus 515 ~l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s 567 (669)
|++|||+ .+++|||+++... .....++..|+|||+..+..++.++||||
T Consensus 132 aL~~lH~----~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiws 207 (288)
T cd05093 132 GMVYLAS----QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS 207 (288)
T ss_pred HHHHHHh----CCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHH
Confidence 9999995 4799999985310 00112366899999998888999999999
Q ss_pred hHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC
Q 040540 568 YGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH 646 (669)
Q Consensus 568 ~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps 646 (669)
|||++|||+| |+.||...... .....+....... . +...+..+.+++.+||+.+|.+|||
T Consensus 208 lG~il~~l~t~g~~p~~~~~~~--~~~~~i~~~~~~~--------~---------~~~~~~~l~~li~~~l~~~p~~Rpt 268 (288)
T cd05093 208 LGVVLWEIFTYGKQPWYQLSNN--EVIECITQGRVLQ--------R---------PRTCPKEVYDLMLGCWQREPHMRLN 268 (288)
T ss_pred HHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCcCC--------C---------CCCCCHHHHHHHHHHccCChhhCCC
Confidence 9999999999 89898653211 1112111111000 0 1112345789999999999999999
Q ss_pred HHHHHHHHHHhHHH
Q 040540 647 MTDAAAKLKKIKVK 660 (669)
Q Consensus 647 ~~~v~~~l~~~~~~ 660 (669)
+.||.+.|+++..+
T Consensus 269 ~~~v~~~l~~~~~~ 282 (288)
T cd05093 269 IKEIHSLLQNLAKA 282 (288)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998754
No 52
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.91 E-value=1.3e-24 Score=224.89 Aligned_cols=200 Identities=19% Similarity=0.214 Sum_probs=145.0
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+..+..++|+|++++++++...+..++||||+++|+|.+++... ..+++.....++.++++|+.|||+. .
T Consensus 48 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~ 123 (331)
T cd06649 48 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREK---H 123 (331)
T ss_pred HHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhc---C
Confidence 35677999999999999999999998888899999999999999999753 4578888999999999999999953 3
Q ss_pred CeeecCCCCcc-----------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 527 PIIHCEGEDSV-----------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 527 ~i~h~d~~~~~-----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
+++|+|+|+.. ......||..|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 124 ~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 203 (331)
T cd06649 124 QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIP 203 (331)
T ss_pred CEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 69999998531 0112348899999999988889999999999999999999999996
Q ss_pred cCCCCCccHHHHHHHhCCCC-------cc------------------------ccccccccchhhhhhhhHHHHHHHHHH
Q 040540 584 EMFTGEMSLRRWVKESLPHR-------LS------------------------EVVDTNLVREEQAFSAKMDCLLSIMDL 632 (669)
Q Consensus 584 ~~~~~~~~l~~~~~~~~~~~-------~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l 632 (669)
.... ..+...+....... .. +..+.......+.. .......++.++
T Consensus 204 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l 280 (331)
T cd06649 204 PPDA--KELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKL-PNGVFTPDFQEF 280 (331)
T ss_pred CCCH--HHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCC-CCccccHHHHHH
Confidence 5321 11111111100000 00 00000000000000 011244578999
Q ss_pred HhhcccCCCCCCCCHHHHHHH
Q 040540 633 ALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 633 ~~~c~~~~P~~Rps~~~v~~~ 653 (669)
+.+||+.||++|||++|+++-
T Consensus 281 i~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 281 VNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred HHHHccCCcccCCCHHHHhcC
Confidence 999999999999999999763
No 53
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.91 E-value=1.4e-24 Score=216.76 Aligned_cols=182 Identities=20% Similarity=0.329 Sum_probs=140.1
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|...+..+.|+|++++++.+..+...++||||+++|+|.++++..+..+++..+..++.|+++|++|||. .+
T Consensus 45 ~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~----~~ 120 (258)
T cd05078 45 SFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLED----KG 120 (258)
T ss_pred HHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 45678888999999999999999998888999999999999999998766678999999999999999999994 48
Q ss_pred eeecCCCCccc-----------------------------ccccccccccCccccccC-CCcCccccchhhHHHHHHHHh
Q 040540 528 IIHCEGEDSVT-----------------------------QTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 528 i~h~d~~~~~~-----------------------------~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~t 577 (669)
++|||+|+... .....++..|+|||++.+ ..++.++|||||||++|||++
T Consensus 121 iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~ 200 (258)
T cd05078 121 LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFS 200 (258)
T ss_pred eecCCCccceEEEecccccccCCCceEEecccccccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHc
Confidence 99999985410 001236788999999876 457899999999999999999
Q ss_pred CC-CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 040540 578 RK-RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKL 654 (669)
Q Consensus 578 g~-~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l 654 (669)
|. .|+..... .......... . .+ +.....++.+++.+||+.+|++|||+++++++|
T Consensus 201 g~~~~~~~~~~--~~~~~~~~~~--~--------~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 201 GGDKPLSALDS--QKKLQFYEDR--H--------QL---------PAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred CCCCChhhccH--HHHHHHHHcc--c--------cC---------CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 95 55443211 1111111100 0 00 111224578999999999999999999999876
No 54
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.91 E-value=2.6e-24 Score=215.45 Aligned_cols=188 Identities=22% Similarity=0.350 Sum_probs=145.8
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
..+..|+..+..++|+|++++++.|......+++|||+++++|.+++... ...+++..+..++.|+++|++|||.
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---- 122 (263)
T cd05052 47 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---- 122 (263)
T ss_pred HHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh----
Confidence 35667899999999999999999998888889999999999999999753 3458999999999999999999994
Q ss_pred CCeeecCCCCccc--------------------c------cccccccccCccccccCCCcCccccchhhHHHHHHHHh-C
Q 040540 526 APIIHCEGEDSVT--------------------Q------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-R 578 (669)
Q Consensus 526 ~~i~h~d~~~~~~--------------------~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g 578 (669)
.+++|+|+++... . ....++..|+|||+..+..++.++|||||||++|||+| |
T Consensus 123 ~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g 202 (263)
T cd05052 123 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 202 (263)
T ss_pred CCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCC
Confidence 4799999985410 0 00113567999999988889999999999999999998 8
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
..|+..... ...........+. . .+...+..+.+++.+||+.+|++||+|.+++++|+.+
T Consensus 203 ~~p~~~~~~--~~~~~~~~~~~~~--------~---------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 203 MSPYPGIDL--SQVYELLEKGYRM--------E---------RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCCH--HHHHHHHHCCCCC--------C---------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 999865221 1111111111100 0 1122345688999999999999999999999999875
No 55
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.91 E-value=2.5e-24 Score=215.20 Aligned_cols=182 Identities=20% Similarity=0.327 Sum_probs=139.2
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|||++++++++......+++|||+++|+|..+++.....+++..+..++.|+++|++|||. .+
T Consensus 50 ~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~----~~ 125 (262)
T cd05077 50 AFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLED----KD 125 (262)
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh----CC
Confidence 45567888899999999999999998888899999999999999987656678999999999999999999994 57
Q ss_pred eeecCCCCccc----------------------------ccccccccccCcccccc-CCCcCccccchhhHHHHHHHH-h
Q 040540 528 IIHCEGEDSVT----------------------------QTTTMATIGYMAPEYGS-EGIVSAKCDVYSYGVLLMETF-T 577 (669)
Q Consensus 528 i~h~d~~~~~~----------------------------~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~Gvil~el~-t 577 (669)
++|+|+++... .....|+..|+|||... +..++.++|||||||++|||+ +
T Consensus 126 ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~ 205 (262)
T cd05077 126 LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYN 205 (262)
T ss_pred eECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhC
Confidence 99999985410 00123677899999886 456899999999999999997 5
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKL 654 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l 654 (669)
|+.|+....... ... ... .. .... ......+.+++.+||+.||.+||++.++++.|
T Consensus 206 ~~~p~~~~~~~~--~~~-~~~---~~-~~~~--------------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 206 GEIPLKDKTLAE--KER-FYE---GQ-CMLV--------------TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CCCCCCCcchhH--HHH-HHh---cC-ccCC--------------CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 888875421111 110 000 00 0000 01124578999999999999999999998865
No 56
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=4.4e-25 Score=222.74 Aligned_cols=183 Identities=25% Similarity=0.269 Sum_probs=148.3
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+++..|+..+..++|||.+.+-|+|-.....|+|||||- |+-.+++.-++.++.+.+...|..|...||.||| +.
T Consensus 71 qDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLH----S~ 145 (948)
T KOG0577|consen 71 QDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH----SH 145 (948)
T ss_pred HHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH----Hh
Confidence 456678999999999999999999999999999999997 7999999888889999999999999999999999 45
Q ss_pred CeeecCCCCc---------------------ccccccccccccCccccc---cCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 527 PIIHCEGEDS---------------------VTQTTTMATIGYMAPEYG---SEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 527 ~i~h~d~~~~---------------------~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+.||||+|.. ....+++|||.|||||++ +.+.|+.|+||||+||+..|+..+++|+
T Consensus 146 ~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPl 225 (948)
T KOG0577|consen 146 NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 225 (948)
T ss_pred hHHhhhccccceEecCCCeeeeccccchhhcCchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCc
Confidence 7899999943 234567899999999986 4588999999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
..|.. ....-.+...-+ |.+. ..+.+..+..|+..|+++-|.+|||.+++++
T Consensus 226 FnMNA--MSALYHIAQNes--------PtLq--------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 226 FNMNA--MSALYHIAQNES--------PTLQ--------SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred cCchH--HHHHHHHHhcCC--------CCCC--------CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 87532 111111111111 1111 2355666789999999999999999988775
No 57
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.91 E-value=1.7e-24 Score=228.19 Aligned_cols=190 Identities=20% Similarity=0.371 Sum_probs=146.0
Q ss_pred ccCchhhhhhcccc-ccccceeccccccccccceeeccCCCCChHHhhhcCC----------------------------
Q 040540 447 RSFDSECEVLRNVR-HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---------------------------- 497 (669)
Q Consensus 447 ~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------------------------- 497 (669)
+.+..|+.++..+. |||+++++++|......++|||||++|+|.+++....
T Consensus 85 ~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (400)
T cd05105 85 QALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTR 164 (400)
T ss_pred HHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCccccccc
Confidence 35677999999996 9999999999999899999999999999999886421
Q ss_pred -------------------------------------------------------------------CccCHHHHHHHHH
Q 040540 498 -------------------------------------------------------------------YFLDILERLNIMI 510 (669)
Q Consensus 498 -------------------------------------------------------------------~~l~~~~~~~i~~ 510 (669)
..+++.....++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 244 (400)
T cd05105 165 SYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTY 244 (400)
T ss_pred chhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHH
Confidence 2367778889999
Q ss_pred hHHhhhhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccc
Q 040540 511 DVGSALEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKC 563 (669)
Q Consensus 511 ~i~~~l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~ 563 (669)
++++|++|||. .+++|+|+|+... .....++..|+|||.+.+..++.++
T Consensus 245 qi~~aL~~LH~----~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 320 (400)
T cd05105 245 QVARGMEFLAS----KNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLS 320 (400)
T ss_pred HHHHHHHHHHh----CCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchh
Confidence 99999999995 4799999985310 0112356789999999888899999
Q ss_pred cchhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCC
Q 040540 564 DVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPD 642 (669)
Q Consensus 564 Dv~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~ 642 (669)
|||||||++|||++ |..||.....+. .+...+...... +.+...+..+.+++.+||+.||+
T Consensus 321 DiwSlGvil~ellt~g~~P~~~~~~~~-~~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~cl~~dP~ 382 (400)
T cd05105 321 DVWSYGILLWEIFSLGGTPYPGMIVDS-TFYNKIKSGYRM-----------------AKPDHATQEVYDIMVKCWNSEPE 382 (400)
T ss_pred hHHHHHHHHHHHHHCCCCCCcccchhH-HHHHHHhcCCCC-----------------CCCccCCHHHHHHHHHHCccCHh
Confidence 99999999999997 899987532211 111111111100 01223445688999999999999
Q ss_pred CCCCHHHHHHHHHHhH
Q 040540 643 KRMHMTDAAAKLKKIK 658 (669)
Q Consensus 643 ~Rps~~~v~~~l~~~~ 658 (669)
+||++.+|+++|+++.
T Consensus 383 ~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 383 KRPSFLHLSDIVESLL 398 (400)
T ss_pred HCcCHHHHHHHHHHHc
Confidence 9999999999999764
No 58
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.91 E-value=2.6e-24 Score=216.03 Aligned_cols=188 Identities=22% Similarity=0.419 Sum_probs=146.7
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..+..++|+|++++.+++...+..++||||+++++|.+++.+....+++.++..++.++++|++|+|. .
T Consensus 51 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~----~ 126 (268)
T cd05063 51 QDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSD----M 126 (268)
T ss_pred HHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 346678889999999999999999998888999999999999999998765678999999999999999999994 4
Q ss_pred CeeecCCCCccc-----------------------c---cc--cccccccCccccccCCCcCccccchhhHHHHHHHHh-
Q 040540 527 PIIHCEGEDSVT-----------------------Q---TT--TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT- 577 (669)
Q Consensus 527 ~i~h~d~~~~~~-----------------------~---~~--~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t- 577 (669)
+++|+|+++... . .. ...+..|+|||+.....++.++|||||||++||++|
T Consensus 127 ~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~ 206 (268)
T cd05063 127 NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSF 206 (268)
T ss_pred CeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhC
Confidence 799999985410 0 00 012346999999988889999999999999999998
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
|+.||..... ..+...+....+ .+.+.+....+.+++.+||+.+|++||+|.+|++.|+++
T Consensus 207 g~~p~~~~~~--~~~~~~i~~~~~-----------------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 207 GERPYWDMSN--HEVMKAINDGFR-----------------LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCCcCCH--HHHHHHHhcCCC-----------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 9999865321 112222111100 011223345678999999999999999999999999876
No 59
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.91 E-value=3.2e-24 Score=215.30 Aligned_cols=192 Identities=20% Similarity=0.254 Sum_probs=148.1
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhc---CCCccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
..+..|+..++.++|+|++++++++...+..++++||+++|+|.+++.. ....+++.....++.++++|+.|||.
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-- 124 (267)
T cd08228 47 QDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS-- 124 (267)
T ss_pred HHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh--
Confidence 3466789999999999999999999888888999999999999998853 23457888899999999999999994
Q ss_pred CCCCeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhC
Q 040540 524 SSAPIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 524 ~~~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg 578 (669)
.+++|+|+++.. ......|+..|+|||...+..++.++||||||+++|||+||
T Consensus 125 --~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g 202 (267)
T cd08228 125 --RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL 202 (267)
T ss_pred --CCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcC
Confidence 489999998431 00112478899999999888889999999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIK 658 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~ 658 (669)
+.||.........+...+... . .+... .......+.+++.+||..+|++||++.+|++.++.++
T Consensus 203 ~~p~~~~~~~~~~~~~~~~~~---~-----~~~~~--------~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 203 QSPFYGDKMNLFSLCQKIEQC---D-----YPPLP--------TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred CCCCccccccHHHHHHHHhcC---C-----CCCCC--------hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 999864322211122211110 0 01110 1234456889999999999999999999999998864
No 60
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.91 E-value=2.7e-24 Score=214.40 Aligned_cols=187 Identities=18% Similarity=0.374 Sum_probs=144.7
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..++.++|+|++++++.|.. ...++||||+++|+|.+++......+++..+.+++.++++|++|+|. .
T Consensus 40 ~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~----~ 114 (257)
T cd05115 40 DEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEG----K 114 (257)
T ss_pred HHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh----c
Confidence 356778999999999999999998764 46689999999999999998656678999999999999999999995 4
Q ss_pred CeeecCCCCccc----------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-
Q 040540 527 PIIHCEGEDSVT----------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT- 577 (669)
Q Consensus 527 ~i~h~d~~~~~~----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t- 577 (669)
+++|+|+++... .....++..|+|||+.....++.++|||||||++||+++
T Consensus 115 ~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~ 194 (257)
T cd05115 115 NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSY 194 (257)
T ss_pred CeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcC
Confidence 799999985410 000112467999999888889999999999999999996
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
|+.||..... ......+....+.. .+..+..++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 195 g~~p~~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 195 GQKPYKKMKG--PEVMSFIEQGKRLD-----------------CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCcCcCCH--HHHHHHHHCCCCCC-----------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 9999875321 11222222111100 0122345678999999999999999999999999865
No 61
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.91 E-value=4.3e-24 Score=217.81 Aligned_cols=196 Identities=23% Similarity=0.381 Sum_probs=149.1
Q ss_pred ccCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCC---------------CccCHHHHHHHHH
Q 040540 447 RSFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMI 510 (669)
Q Consensus 447 ~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~ 510 (669)
+.+..|+..+.++ +|||++++++++......++++||+++|+|.+++++.. ..+++.....++.
T Consensus 47 ~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 126 (297)
T cd05089 47 RDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFAS 126 (297)
T ss_pred HHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHH
Confidence 4567788888888 79999999999988888999999999999999997522 2478889999999
Q ss_pred hHHhhhhhhhcCCCCCCeeecCCCCccc---------------c-------cc--cccccccCccccccCCCcCccccch
Q 040540 511 DVGSALEYLRHGHSSAPIIHCEGEDSVT---------------Q-------TT--TMATIGYMAPEYGSEGIVSAKCDVY 566 (669)
Q Consensus 511 ~i~~~l~~lh~~~~~~~i~h~d~~~~~~---------------~-------~~--~~gt~~y~aPE~~~~~~~~~~~Dv~ 566 (669)
|++.|++|||. .+++|+|+|+... . .. ...+..|+|||+.....++.++|||
T Consensus 127 qi~~al~~lH~----~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw 202 (297)
T cd05089 127 DVATGMQYLSE----KQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVW 202 (297)
T ss_pred HHHHHHHHHHH----CCcccCcCCcceEEECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHH
Confidence 99999999994 4799999985410 0 00 1124469999999888899999999
Q ss_pred hhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC
Q 040540 567 SYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM 645 (669)
Q Consensus 567 s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp 645 (669)
||||++|||+| |+.||..... ....... +.... .. .+...+..+.+++.+||+.+|.+||
T Consensus 203 SlG~il~el~t~g~~pf~~~~~-----~~~~~~~-~~~~~----~~---------~~~~~~~~~~~li~~~l~~~p~~Rp 263 (297)
T cd05089 203 SFGVLLWEIVSLGGTPYCGMTC-----AELYEKL-PQGYR----ME---------KPRNCDDEVYELMRQCWRDRPYERP 263 (297)
T ss_pred HHHHHHHHHHcCCCCCCCCCCH-----HHHHHHH-hcCCC----CC---------CCCCCCHHHHHHHHHHcCCChhhCc
Confidence 99999999998 9999865321 1111111 11000 00 0112345678999999999999999
Q ss_pred CHHHHHHHHHHhHHHhhhhh
Q 040540 646 HMTDAAAKLKKIKVKFLDDV 665 (669)
Q Consensus 646 s~~~v~~~l~~~~~~~~~~~ 665 (669)
++.++++.|+++.++....+
T Consensus 264 ~~~~i~~~l~~~~~~~~~~~ 283 (297)
T cd05089 264 PFAQISVQLSRMLEARKAYV 283 (297)
T ss_pred CHHHHHHHHHHHHHhhcccc
Confidence 99999999999887754433
No 62
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.90 E-value=4.6e-24 Score=214.02 Aligned_cols=188 Identities=21% Similarity=0.392 Sum_probs=147.8
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+..+..++|+|++++++.+......+++|||+++++|.+++......+++....+++.+++.|++|||. .
T Consensus 50 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~----~ 125 (266)
T cd05033 50 LDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSE----M 125 (266)
T ss_pred HHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 356678899999999999999999988888999999999999999998765678999999999999999999994 5
Q ss_pred CeeecCCCCccc----------------------c-----cccccccccCccccccCCCcCccccchhhHHHHHHHHh-C
Q 040540 527 PIIHCEGEDSVT----------------------Q-----TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-R 578 (669)
Q Consensus 527 ~i~h~d~~~~~~----------------------~-----~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g 578 (669)
+++|+|+++... . ....++..|+|||...+..++.++||||||+++|||++ |
T Consensus 126 ~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g 205 (266)
T cd05033 126 NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYG 205 (266)
T ss_pred CcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccC
Confidence 799999985310 0 00123467999999988889999999999999999998 9
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
..||.... ...+...+...... +.+.+++..+.+++.+||+.+|++||++.||++.|+++
T Consensus 206 ~~p~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 206 ERPYWDMS--NQDVIKAVEDGYRL-----------------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCCCCC--HHHHHHHHHcCCCC-----------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99986532 11222222211100 00122345678999999999999999999999999875
No 63
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.90 E-value=3.4e-24 Score=214.35 Aligned_cols=188 Identities=20% Similarity=0.333 Sum_probs=145.9
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+.+..|+..+..++|+|++++++.+......+++|||+++|+|.+++++. ...+++..+..++.++++|++|||.
T Consensus 46 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~---- 121 (261)
T cd05072 46 QAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---- 121 (261)
T ss_pred HHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH----
Confidence 45667899999999999999999998888899999999999999999753 3467888999999999999999995
Q ss_pred CCeeecCCCCcc--------------------c------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-C
Q 040540 526 APIIHCEGEDSV--------------------T------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-R 578 (669)
Q Consensus 526 ~~i~h~d~~~~~--------------------~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g 578 (669)
.+++|+|+++.. . .....++..|+|||+.....++.++|||||||++|||+| |
T Consensus 122 ~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g 201 (261)
T cd05072 122 KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYG 201 (261)
T ss_pred CCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccC
Confidence 479999998531 0 001124567999999988889999999999999999999 9
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
+.||.... ......++....+. +.....+..+.+++.+|+..+|++||++.++.+.|+++
T Consensus 202 ~~p~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 202 KIPYPGMS--NSDVMSALQRGYRM-----------------PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred CCCCCCCC--HHHHHHHHHcCCCC-----------------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 99986522 11222222211110 00112334578999999999999999999999998763
No 64
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.90 E-value=1.4e-24 Score=223.48 Aligned_cols=190 Identities=20% Similarity=0.340 Sum_probs=145.9
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..+..++|+|+++++++|... ..++++||+++|+|.++++.....+++.....++.|+++||+|||. .
T Consensus 54 ~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~----~ 128 (316)
T cd05108 54 KEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEE----R 128 (316)
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHh----c
Confidence 3566788999999999999999998764 4679999999999999998766678899999999999999999994 4
Q ss_pred CeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-C
Q 040540 527 PIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-R 578 (669)
Q Consensus 527 ~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g 578 (669)
+++|+|+|+... .....++..|+|||++.+..++.++|||||||++||++| |
T Consensus 129 ~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g 208 (316)
T cd05108 129 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 208 (316)
T ss_pred CeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCC
Confidence 799999985310 001113567999999988889999999999999999998 9
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIK 658 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~ 658 (669)
+.||..... ..+........ .. +.+..+...+.+++.+||+.+|++||++.+++..+.++.
T Consensus 209 ~~p~~~~~~--~~~~~~~~~~~--~~---------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 209 SKPYDGIPA--SEISSILEKGE--RL---------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred CCCCCCCCH--HHHHHHHhCCC--CC---------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 999865321 11222211110 00 001122345789999999999999999999999988875
Q ss_pred HH
Q 040540 659 VK 660 (669)
Q Consensus 659 ~~ 660 (669)
..
T Consensus 270 ~~ 271 (316)
T cd05108 270 RD 271 (316)
T ss_pred cC
Confidence 43
No 65
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.90 E-value=4e-24 Score=216.24 Aligned_cols=187 Identities=28% Similarity=0.484 Sum_probs=145.8
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC-------------CccCHHHHHHHHHhHH
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-------------YFLDILERLNIMIDVG 513 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-------------~~l~~~~~~~i~~~i~ 513 (669)
+.+..|+.++..++|+|++++++.+......+++|||+++|+|.++++..+ ..+++.....++.+++
T Consensus 53 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~ 132 (280)
T cd05049 53 KDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIA 132 (280)
T ss_pred HHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHH
Confidence 467789999999999999999999998889999999999999999997532 3467888899999999
Q ss_pred hhhhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccccch
Q 040540 514 SALEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVY 566 (669)
Q Consensus 514 ~~l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~ 566 (669)
.|+.|+|. .+++|+|+++... .....++..|+|||++.+..++.++|||
T Consensus 133 ~~l~~lH~----~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 208 (280)
T cd05049 133 SGMVYLAS----QHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW 208 (280)
T ss_pred HHHHHHhh----CCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHH
Confidence 99999994 4799999985410 0111245679999999888899999999
Q ss_pred hhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC
Q 040540 567 SYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM 645 (669)
Q Consensus 567 s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp 645 (669)
||||++|||++ |+.||.... ............... .+...+..+.+++.+||+.||++||
T Consensus 209 slG~il~e~~~~g~~p~~~~~--~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~li~~~l~~~p~~Rp 269 (280)
T cd05049 209 SFGVVLWEIFTYGKQPWYGLS--NEEVIECITQGRLLQ-----------------RPRTCPSEVYDIMLGCWKRDPQQRI 269 (280)
T ss_pred HHHHHHHHHHhcCCCCCCCCC--HHHHHHHHHcCCcCC-----------------CCCCCCHHHHHHHHHHcCCCcccCC
Confidence 99999999999 999986532 122222222111100 0112345678999999999999999
Q ss_pred CHHHHHHHHHH
Q 040540 646 HMTDAAAKLKK 656 (669)
Q Consensus 646 s~~~v~~~l~~ 656 (669)
++.||++.|++
T Consensus 270 ~~~eil~~l~~ 280 (280)
T cd05049 270 NIKDIHERLQK 280 (280)
T ss_pred CHHHHHHHhhC
Confidence 99999998863
No 66
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.90 E-value=3.1e-24 Score=232.44 Aligned_cols=182 Identities=20% Similarity=0.196 Sum_probs=142.2
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhc---CCCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
.+..|+..+..++|||++++++++...+..++||||+++|+|.++++. ...++++.+...++.+++.||+|+|.
T Consensus 111 ~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~--- 187 (478)
T PTZ00267 111 YARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS--- 187 (478)
T ss_pred HHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---
Confidence 345689999999999999999999999999999999999999998864 23467888899999999999999994
Q ss_pred CCCeeecCCCCcc---------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 525 SAPIIHCEGEDSV---------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 525 ~~~i~h~d~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
.+|+|||+|+.. ......||+.|+|||++.+..++.++|||||||++|||+|
T Consensus 188 -~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t 266 (478)
T PTZ00267 188 -RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLT 266 (478)
T ss_pred -CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHh
Confidence 489999999430 0112348999999999988889999999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|+.||..... ..+...+... .. ++ .+......+.+++.+||..||++||++.+++.
T Consensus 267 g~~Pf~~~~~--~~~~~~~~~~---~~----~~----------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 267 LHRPFKGPSQ--REIMQQVLYG---KY----DP----------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCCCCCCCCH--HHHHHHHHhC---CC----CC----------CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 9999865221 1111111110 00 00 01123346789999999999999999999865
No 67
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.90 E-value=2.1e-24 Score=196.41 Aligned_cols=193 Identities=18% Similarity=0.236 Sum_probs=147.8
Q ss_pred cCchhhhhhccccccccceeccccccc-----cccceeeccCCCCChHHhhhc---CCCccCHHHHHHHHHhHHhhhhhh
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNP-----DFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYL 519 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~l 519 (669)
...+|++.-++.+|||++++++++... .+.|++++|...|+|.+.+.. ++..+++.+.+.|+.++.+||+++
T Consensus 64 ~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~l 143 (302)
T KOG2345|consen 64 EALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEAL 143 (302)
T ss_pred HHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHH
Confidence 445789999999999999999987543 357999999999999999875 455899999999999999999999
Q ss_pred hcCCCCCCeeecCCCCccc----------------------------------ccccccccccCccccccC---CCcCcc
Q 040540 520 RHGHSSAPIIHCEGEDSVT----------------------------------QTTTMATIGYMAPEYGSE---GIVSAK 562 (669)
Q Consensus 520 h~~~~~~~i~h~d~~~~~~----------------------------------~~~~~gt~~y~aPE~~~~---~~~~~~ 562 (669)
|.. .++.+|+|+|+... -....-|..|.|||.+.- ...++|
T Consensus 144 H~~--~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~er 221 (302)
T KOG2345|consen 144 HEK--EPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITER 221 (302)
T ss_pred hcc--CCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccc
Confidence 965 56899999996410 001124788999998754 346789
Q ss_pred ccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCC
Q 040540 563 CDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPD 642 (669)
Q Consensus 563 ~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~ 642 (669)
+||||+||++|+|+-|..||+.....+..++-.+. .....+|.....+..+.+++..|++.||.
T Consensus 222 tDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~----------------n~q~s~P~~~~yse~l~~lik~mlqvdP~ 285 (302)
T KOG2345|consen 222 TDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQ----------------NAQISIPNSSRYSEALHQLIKSMLQVDPN 285 (302)
T ss_pred cchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeee----------------ccccccCCCCCccHHHHHHHHHHhcCCcc
Confidence 99999999999999999999865443322211111 10111112223566789999999999999
Q ss_pred CCCCHHHHHHHHHHhH
Q 040540 643 KRMHMTDAAAKLKKIK 658 (669)
Q Consensus 643 ~Rps~~~v~~~l~~~~ 658 (669)
+||+..+++..++++.
T Consensus 286 qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 286 QRPTIPELLSKLDDLI 301 (302)
T ss_pred cCCCHHHHHHHHHhhc
Confidence 9999999999888753
No 68
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.90 E-value=5.4e-24 Score=212.13 Aligned_cols=186 Identities=20% Similarity=0.325 Sum_probs=144.2
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+..+.+++|||+++++++|......+++|||+++|+|.+++......+++....+++.+++.|++|||+ .
T Consensus 44 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~----~ 119 (256)
T cd05113 44 DEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLES----K 119 (256)
T ss_pred HHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 346779999999999999999999988888899999999999999997655578999999999999999999995 4
Q ss_pred CeeecCCCCccc--------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-CC
Q 040540 527 PIIHCEGEDSVT--------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RK 579 (669)
Q Consensus 527 ~i~h~d~~~~~~--------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~ 579 (669)
+++|+|+++... .....++..|+|||+.....++.++|||||||++|||+| |+
T Consensus 120 ~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~ 199 (256)
T cd05113 120 QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGK 199 (256)
T ss_pred CeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCC
Confidence 799999885310 001124467999999988889999999999999999999 99
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHH
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~ 655 (669)
.||..... ......+....... .+......+.+++.+||+.+|.+||++.++++.|+
T Consensus 200 ~p~~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 200 MPYERFNN--SETVEKVSQGLRLY-----------------RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCcCcCCH--HHHHHHHhcCCCCC-----------------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 99865321 11222211111000 01112356789999999999999999999998763
No 69
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.90 E-value=3.3e-24 Score=215.69 Aligned_cols=180 Identities=20% Similarity=0.278 Sum_probs=143.4
Q ss_pred cCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
-...|-..|..+ .||.+++++..+++....|+|+||+++|+|.++|++. ..+++....-++.+|..|++||| +.
T Consensus 119 YV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH----~~ 193 (604)
T KOG0592|consen 119 YVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLH----SN 193 (604)
T ss_pred hhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHH----hc
Confidence 344577778888 8999999999999999999999999999999999865 45788888889999999999999 46
Q ss_pred CeeecCCCCc------------------------------------cc--ccccccccccCccccccCCCcCccccchhh
Q 040540 527 PIIHCEGEDS------------------------------------VT--QTTTMATIGYMAPEYGSEGIVSAKCDVYSY 568 (669)
Q Consensus 527 ~i~h~d~~~~------------------------------------~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~ 568 (669)
+|||||+|+. .. ..+++||..|++||++.++..+..+|+|+|
T Consensus 194 GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAl 273 (604)
T KOG0592|consen 194 GIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWAL 273 (604)
T ss_pred CceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHH
Confidence 8999999942 01 145789999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH
Q 040540 569 GVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMT 648 (669)
Q Consensus 569 Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~ 648 (669)
|||+|+|+.|++||.+..+ -..++..+.- + +..+.+.++.+.+++.+.+..||.+|+|.+
T Consensus 274 GCilyQmlaG~PPFra~Ne-yliFqkI~~l----------~---------y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~ 333 (604)
T KOG0592|consen 274 GCILYQMLAGQPPFRAANE-YLIFQKIQAL----------D---------YEFPEGFPEDARDLIKKLLVRDPSDRLTSQ 333 (604)
T ss_pred HHHHHHHhcCCCCCccccH-HHHHHHHHHh----------c---------ccCCCCCCHHHHHHHHHHHccCccccccHH
Confidence 9999999999999976321 1111111110 0 112334446788999999999999999996
Q ss_pred HHHH
Q 040540 649 DAAA 652 (669)
Q Consensus 649 ~v~~ 652 (669)
+|.+
T Consensus 334 qIk~ 337 (604)
T KOG0592|consen 334 QIKA 337 (604)
T ss_pred HHhh
Confidence 6643
No 70
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.90 E-value=2.1e-24 Score=214.57 Aligned_cols=185 Identities=22% Similarity=0.386 Sum_probs=143.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|++.++.++|+|++++++.|......++||||+++++|.+++...+..+++.....++.+++.|++|||. .+
T Consensus 39 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~----~~ 114 (252)
T cd05084 39 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLES----KH 114 (252)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 46678999999999999999999998889999999999999999997655568999999999999999999994 47
Q ss_pred eeecCCCCccc--------------c---------ccc----ccccccCccccccCCCcCccccchhhHHHHHHHHh-CC
Q 040540 528 IIHCEGEDSVT--------------Q---------TTT----MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RK 579 (669)
Q Consensus 528 i~h~d~~~~~~--------------~---------~~~----~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~ 579 (669)
++|+|+++... . ... .++..|+|||.+.+..++.++|||||||++|||++ |.
T Consensus 115 i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~ 194 (252)
T cd05084 115 CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGA 194 (252)
T ss_pred ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCC
Confidence 99999985410 0 000 11245999999988889999999999999999998 88
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHH
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~ 655 (669)
.||..... ......+....+. +.+...+..+.+++.+|++.+|++||++.+|.++|+
T Consensus 195 ~p~~~~~~--~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 195 VPYANLSN--QQTREAIEQGVRL-----------------PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCccccCH--HHHHHHHHcCCCC-----------------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 88865321 1111111111000 011223456789999999999999999999999886
No 71
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.90 E-value=2.8e-24 Score=217.67 Aligned_cols=201 Identities=21% Similarity=0.306 Sum_probs=145.6
Q ss_pred ccCchhhhhhccccccccceeccccccc--cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNP--DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
..+..|+..++.++|+|+++++++|... ...+++|||+++|+|.+++... .+++.++..++.++++|++|||.
T Consensus 51 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~--- 125 (283)
T cd05080 51 SGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHS--- 125 (283)
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHH---
Confidence 3466789999999999999999987653 4578999999999999999753 48999999999999999999995
Q ss_pred CCCeeecCCCCccc----------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHH
Q 040540 525 SAPIIHCEGEDSVT----------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 525 ~~~i~h~d~~~~~~----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~ 576 (669)
.+++|+|+|+... .....++..|+|||......++.++|||||||++|||+
T Consensus 126 -~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~ 204 (283)
T cd05080 126 -QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELL 204 (283)
T ss_pred -CCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHH
Confidence 4799999995410 00112455699999998888999999999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHHhC-CCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHH
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKESL-PHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~ 655 (669)
||+.|+.........+..+..... .....+.++... ..+.+...+..+.+++.+||+.+|++|||+++|++.|+
T Consensus 205 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~ 279 (283)
T cd05080 205 THCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGM-----RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILK 279 (283)
T ss_pred hCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCC-----CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 999998653221111111000000 000001111110 01112234567899999999999999999999999999
Q ss_pred HhH
Q 040540 656 KIK 658 (669)
Q Consensus 656 ~~~ 658 (669)
+++
T Consensus 280 ~~~ 282 (283)
T cd05080 280 EMH 282 (283)
T ss_pred Hhh
Confidence 875
No 72
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.90 E-value=5.7e-24 Score=215.50 Aligned_cols=185 Identities=19% Similarity=0.202 Sum_probs=141.9
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|+.++..++|++++++++.+...+..++||||+++|+|.+++... ...+++.....++.|++.|++|||. .
T Consensus 46 ~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~----~ 121 (285)
T cd05631 46 MALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR----E 121 (285)
T ss_pred HHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 3557899999999999999999998888999999999999999888643 3358899999999999999999994 4
Q ss_pred CeeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 527 PIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 527 ~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+++|||+|+.. ......||..|||||++.+..++.++|||||||++|||++|+.||
T Consensus 122 ~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf 201 (285)
T cd05631 122 RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPF 201 (285)
T ss_pred CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCC
Confidence 89999998430 012235899999999999888999999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC-----HHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH-----MTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps-----~~~v~~ 652 (669)
....... ...-+......... ..+......+.+++.+||+.||.+||+ ++++++
T Consensus 202 ~~~~~~~--~~~~~~~~~~~~~~--------------~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 202 RKRKERV--KREEVDRRVKEDQE--------------EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred CCCCcch--hHHHHHHHhhcccc--------------cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 7632211 11111111111000 011223456789999999999999997 677765
No 73
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.90 E-value=2.5e-24 Score=220.11 Aligned_cols=193 Identities=25% Similarity=0.407 Sum_probs=147.1
Q ss_pred ccCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCC---------------CccCHHHHHHHHH
Q 040540 447 RSFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMI 510 (669)
Q Consensus 447 ~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~ 510 (669)
+.+..|+..+.++ +|+|++++++++...+..++||||+++|+|.++++..+ ..+++.+...++.
T Consensus 52 ~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 131 (303)
T cd05088 52 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 131 (303)
T ss_pred HHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHH
Confidence 3566788889898 89999999999999899999999999999999997432 2478889999999
Q ss_pred hHHhhhhhhhcCCCCCCeeecCCCCcccc------------------------cccccccccCccccccCCCcCccccch
Q 040540 511 DVGSALEYLRHGHSSAPIIHCEGEDSVTQ------------------------TTTMATIGYMAPEYGSEGIVSAKCDVY 566 (669)
Q Consensus 511 ~i~~~l~~lh~~~~~~~i~h~d~~~~~~~------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~ 566 (669)
++++|++|||+ .+++|+|+++.... ....++..|+|||+..+..++.++|||
T Consensus 132 qi~~al~~LH~----~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 207 (303)
T cd05088 132 DVARGMDYLSQ----KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVW 207 (303)
T ss_pred HHHHHHHHHHh----CCccccccchheEEecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccch
Confidence 99999999994 48999999954100 001134579999998888889999999
Q ss_pred hhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC
Q 040540 567 SYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM 645 (669)
Q Consensus 567 s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp 645 (669)
||||++|||+| |..||...... .....+ +.... . ..+...+..+.+++.+||+.+|++||
T Consensus 208 slG~il~ellt~g~~p~~~~~~~--~~~~~~----~~~~~----~---------~~~~~~~~~~~~li~~~l~~~p~~Rp 268 (303)
T cd05088 208 SYGVLLWEIVSLGGTPYCGMTCA--ELYEKL----PQGYR----L---------EKPLNCDDEVYDLMRQCWREKPYERP 268 (303)
T ss_pred hhhhHHHHHHhcCCCCcccCChH--HHHHHH----hcCCc----C---------CCCCCCCHHHHHHHHHHcCCChhhCc
Confidence 99999999998 99998653211 111111 11000 0 00112234578999999999999999
Q ss_pred CHHHHHHHHHHhHHHhh
Q 040540 646 HMTDAAAKLKKIKVKFL 662 (669)
Q Consensus 646 s~~~v~~~l~~~~~~~~ 662 (669)
++.+++++++++.....
T Consensus 269 ~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 269 SFAQILVSLNRMLEERK 285 (303)
T ss_pred CHHHHHHHHHHHHHhhh
Confidence 99999999998765543
No 74
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.90 E-value=8.5e-24 Score=212.20 Aligned_cols=191 Identities=21% Similarity=0.243 Sum_probs=147.7
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhc---CCCccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
..+..|+..+..++|+|++++++++..++..+++|||+++++|.+++.. ....+++.....++.++++|+.|||.
T Consensus 47 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-- 124 (267)
T cd08229 47 ADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS-- 124 (267)
T ss_pred HHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH--
Confidence 3566789999999999999999999888889999999999999999863 23468899999999999999999994
Q ss_pred CCCCeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhC
Q 040540 524 SSAPIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 524 ~~~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg 578 (669)
.+++|+|+++.. ......|+..|+|||+..+..++.++||||||+++|||++|
T Consensus 125 --~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g 202 (267)
T cd08229 125 --RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL 202 (267)
T ss_pred --CCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhC
Confidence 479999998431 00122578899999999888899999999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
..||.....+...+...+.. ...+... +......+.+++.+||..+|++||||.+|.++++++
T Consensus 203 ~~p~~~~~~~~~~~~~~~~~--------~~~~~~~--------~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 203 QSPFYGDKMNLYSLCKKIEQ--------CDYPPLP--------SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCCcccccchHHHHhhhhhc--------CCCCCCC--------cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 99986432211111111110 0011110 123445688999999999999999999999998875
No 75
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.90 E-value=3.2e-24 Score=219.56 Aligned_cols=193 Identities=22% Similarity=0.377 Sum_probs=147.9
Q ss_pred ccCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCC---------------CccCHHHHHHHHH
Q 040540 447 RSFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMI 510 (669)
Q Consensus 447 ~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~ 510 (669)
+.+..|+..+..+ +|+|++++++.+......+++|||+++|+|.+++.... ..+++.++..++.
T Consensus 65 ~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (304)
T cd05101 65 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTY 144 (304)
T ss_pred HHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHH
Confidence 3566788889888 89999999999998889999999999999999997521 2477888999999
Q ss_pred hHHhhhhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccc
Q 040540 511 DVGSALEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKC 563 (669)
Q Consensus 511 ~i~~~l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~ 563 (669)
|+++|++|||. .+++|+|+|+... .....++..|+|||+..+..++.++
T Consensus 145 qi~~al~~LH~----~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 220 (304)
T cd05101 145 QVARGMEYLAS----QKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 220 (304)
T ss_pred HHHHHHHHHHH----CCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchh
Confidence 99999999994 4799999985410 0011245679999999888899999
Q ss_pred cchhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCC
Q 040540 564 DVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPD 642 (669)
Q Consensus 564 Dv~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~ 642 (669)
|||||||++||++| |..|+.... ...+...+...... ..+..++..+.+++.+||..+|+
T Consensus 221 Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~cl~~~p~ 281 (304)
T cd05101 221 DVWSFGVLMWEIFTLGGSPYPGIP--VEELFKLLKEGHRM-----------------DKPANCTNELYMMMRDCWHAIPS 281 (304)
T ss_pred hHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHHcCCcC-----------------CCCCCCCHHHHHHHHHHcccChh
Confidence 99999999999998 788875421 11111111111000 00123345678999999999999
Q ss_pred CCCCHHHHHHHHHHhHHHhh
Q 040540 643 KRMHMTDAAAKLKKIKVKFL 662 (669)
Q Consensus 643 ~Rps~~~v~~~l~~~~~~~~ 662 (669)
+||+|.||++.|+++.....
T Consensus 282 ~Rps~~e~l~~l~~~~~~~~ 301 (304)
T cd05101 282 HRPTFKQLVEDLDRILTLTT 301 (304)
T ss_pred hCCCHHHHHHHHHHHHHhhh
Confidence 99999999999999876543
No 76
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.90 E-value=3.8e-24 Score=217.34 Aligned_cols=191 Identities=22% Similarity=0.366 Sum_probs=157.3
Q ss_pred cccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
.+.|..|..+|++.+||||++++|.|.. ...|||||.++-|.|..+|..++..++......++.|+..|++||| +
T Consensus 435 tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe----S 509 (974)
T KOG4257|consen 435 TEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE----S 509 (974)
T ss_pred HHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH----h
Confidence 3567889999999999999999999974 5668999999999999999988888998999999999999999998 4
Q ss_pred CCeeecCCCCc------------------------ccccccc--cccccCccccccCCCcCccccchhhHHHHHHHHh-C
Q 040540 526 APIIHCEGEDS------------------------VTQTTTM--ATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-R 578 (669)
Q Consensus 526 ~~i~h~d~~~~------------------------~~~~~~~--gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g 578 (669)
.+.+|||+..- ...+... --..|||||-+.-++++.++|||-|||.+||++. |
T Consensus 510 krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lG 589 (974)
T KOG4257|consen 510 KRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLG 589 (974)
T ss_pred hchhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhc
Confidence 58999998721 0011111 2457999999999999999999999999999977 8
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIK 658 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~ 658 (669)
..||......+. + .....+.|.|.++.|++.+.-++.+||+.+|.+||.+.++...|.++.
T Consensus 590 vkPfqgvkNsDV-----------------I--~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 590 VKPFQGVKNSDV-----------------I--GHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred CCccccccccce-----------------E--EEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 999976432221 1 112234566778899999999999999999999999999999999987
Q ss_pred HH
Q 040540 659 VK 660 (669)
Q Consensus 659 ~~ 660 (669)
+.
T Consensus 651 qe 652 (974)
T KOG4257|consen 651 QE 652 (974)
T ss_pred HH
Confidence 63
No 77
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.90 E-value=7.1e-24 Score=211.33 Aligned_cols=184 Identities=25% Similarity=0.355 Sum_probs=143.3
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|+|++++++++......++||||+++++|.++++.....+++.....++.++++|++|||. .+
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~----~~ 120 (256)
T cd05059 45 DFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLES----NG 120 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 46678999999999999999999988888999999999999999998655578999999999999999999995 47
Q ss_pred eeecCCCCccc---------------c--------cc---cccccccCccccccCCCcCccccchhhHHHHHHHHh-CCC
Q 040540 528 IIHCEGEDSVT---------------Q--------TT---TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKR 580 (669)
Q Consensus 528 i~h~d~~~~~~---------------~--------~~---~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~ 580 (669)
++|+|+++... . .. ..++..|+|||...+..++.++|||||||++|||+| |+.
T Consensus 121 i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~ 200 (256)
T cd05059 121 FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKM 200 (256)
T ss_pred cccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCC
Confidence 99999885410 0 00 112346999999988889999999999999999999 788
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKL 654 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l 654 (669)
||..... ......+....+. +.+...+..+.+++.+||+.+|++||||.|+++.|
T Consensus 201 p~~~~~~--~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 201 PYERFSN--SEVVESVSAGYRL-----------------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCCH--HHHHHHHHcCCcC-----------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 9865321 1122212111110 01122345688999999999999999999999876
No 78
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=4.3e-24 Score=193.55 Aligned_cols=182 Identities=21% Similarity=0.258 Sum_probs=147.9
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+++.+|+++-+.++||||.++++++.+....|+++||.++|+++..|.+.. ..+++.....++.|+|.|+.|+| .
T Consensus 67 ~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h----~ 142 (281)
T KOG0580|consen 67 HQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH----L 142 (281)
T ss_pred hhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc----c
Confidence 467789999999999999999999999999999999999999999998532 34777788889999999999999 4
Q ss_pred CCeeecCCCCc-----------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 526 APIIHCEGEDS-----------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 526 ~~i~h~d~~~~-----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+.|||||+|+. ....+.+||.-|.+||+..+..++.++|+|++||+.||++.|.+||
T Consensus 143 k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppF 222 (281)
T KOG0580|consen 143 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPF 222 (281)
T ss_pred CCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCch
Confidence 68999999943 2234557999999999999999999999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
..... .....+-.+. ++.+ +......+.+++.+|+..+|.+|.+..||+.
T Consensus 223 es~~~-~etYkrI~k~-------~~~~------------p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 223 ESQSH-SETYKRIRKV-------DLKF------------PSTISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred hhhhh-HHHHHHHHHc-------cccC------------CcccChhHHHHHHHHhccCccccccHHHHhh
Confidence 76431 1112211111 1111 2334456789999999999999999999864
No 79
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.90 E-value=5.3e-24 Score=207.67 Aligned_cols=182 Identities=21% Similarity=0.270 Sum_probs=144.0
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhc-CCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS-HNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
....|-+++..+.||.+..++..+..+.+.+++||||+||+|+.+.++ .+..+++....-++.+|.-||+|||- .
T Consensus 123 Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHm----l 198 (459)
T KOG0610|consen 123 RAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHM----L 198 (459)
T ss_pred HHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHh----h
Confidence 344678899999999999999999999999999999999999999876 34467888888899999999999994 4
Q ss_pred CeeecCCCCc----------------------------------------------------------------------
Q 040540 527 PIIHCEGEDS---------------------------------------------------------------------- 536 (669)
Q Consensus 527 ~i~h~d~~~~---------------------------------------------------------------------- 536 (669)
+||-||+|+.
T Consensus 199 GivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~ 278 (459)
T KOG0610|consen 199 GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASR 278 (459)
T ss_pred ceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccc
Confidence 7888888721
Q ss_pred -----------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCcc
Q 040540 537 -----------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLS 605 (669)
Q Consensus 537 -----------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~ 605 (669)
....+++||..|.|||++.+..++.++|+|+|||.+|||+.|+.||.+....+ .+ .
T Consensus 279 ~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~-Tl------------~ 345 (459)
T KOG0610|consen 279 SLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-TL------------R 345 (459)
T ss_pred cchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh-hH------------H
Confidence 00113469999999999999999999999999999999999999997643322 12 2
Q ss_pred ccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC----HHHHH
Q 040540 606 EVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH----MTDAA 651 (669)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps----~~~v~ 651 (669)
.++... ..++.....+..+.|+|.+.+.+||.+|-. +.||.
T Consensus 346 NIv~~~-----l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 346 NIVGQP-----LKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred HHhcCC-----CcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence 222221 223333456678899999999999999987 55553
No 80
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.90 E-value=7.2e-24 Score=211.27 Aligned_cols=183 Identities=21% Similarity=0.207 Sum_probs=143.9
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
..+..|+..++.++|+|++++++++......++||||+++++|.++++.. ...+++....+++.++++|+.|||.
T Consensus 44 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~---- 119 (256)
T cd08529 44 EEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS---- 119 (256)
T ss_pred HHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH----
Confidence 45667888999999999999999999888899999999999999999864 4568899999999999999999994
Q ss_pred CCeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCC
Q 040540 526 APIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 526 ~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
.+++|+|+++.. ......|++.|+|||+..+..++.++|||||||++|||+||+.
T Consensus 120 ~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~ 199 (256)
T cd08529 120 KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKH 199 (256)
T ss_pred CCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCC
Confidence 489999998531 0011247788999999988889999999999999999999999
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
||.... .......+...... .+ +......+.+++.+||+.+|++||+|.++++
T Consensus 200 p~~~~~--~~~~~~~~~~~~~~--------~~---------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 200 PFDANN--QGALILKIIRGVFP--------PV---------SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred CCCCCC--HHHHHHHHHcCCCC--------CC---------ccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 986532 11112211111100 00 1123456789999999999999999999976
No 81
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=2.9e-24 Score=216.08 Aligned_cols=186 Identities=19% Similarity=0.285 Sum_probs=141.7
Q ss_pred cccCchhhhhhcccc-ccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 446 FRSFDSECEVLRNVR-HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
...|..|+..+.+++ |.+||.+++|...+++.|+||||-+ -+|..+|+......+.-.+..|..++..++.++|+.
T Consensus 403 l~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~-- 479 (677)
T KOG0596|consen 403 LDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQH-- 479 (677)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeeccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh--
Confidence 346788999999995 8999999999999999999999775 699999987655555236778999999999999965
Q ss_pred CCCeeecCCCCc--------------------------ccccccccccccCccccccCC-----------CcCccccchh
Q 040540 525 SAPIIHCEGEDS--------------------------VTQTTTMATIGYMAPEYGSEG-----------IVSAKCDVYS 567 (669)
Q Consensus 525 ~~~i~h~d~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~s 567 (669)
+|||.|+|+. ....+.+||+.||+||.+... +.+.++||||
T Consensus 480 --gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWS 557 (677)
T KOG0596|consen 480 --GIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWS 557 (677)
T ss_pred --ceeecCCCcccEEEEeeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhh
Confidence 8999999954 112345799999999976432 2568999999
Q ss_pred hHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 568 YGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 568 ~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
+|||||+|+.|++||.... ..|.+ +..+++|...=+.+..+.. ..+++++..|+++||.+||+.
T Consensus 558 LGCILYqMvYgktPf~~~~------n~~aK------l~aI~~P~~~Iefp~~~~~----~~li~~mK~CL~rdPkkR~si 621 (677)
T KOG0596|consen 558 LGCILYQMVYGKTPFGQII------NQIAK------LHAITDPNHEIEFPDIPEN----DELIDVMKCCLARDPKKRWSI 621 (677)
T ss_pred hhhHHHHHHhcCCchHHHH------HHHHH------HHhhcCCCccccccCCCCc----hHHHHHHHHHHhcCcccCCCc
Confidence 9999999999999986521 12222 2334444321111111111 227899999999999999999
Q ss_pred HHHHH
Q 040540 648 TDAAA 652 (669)
Q Consensus 648 ~~v~~ 652 (669)
.++++
T Consensus 622 ~eLLq 626 (677)
T KOG0596|consen 622 PELLQ 626 (677)
T ss_pred HHHhc
Confidence 99987
No 82
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.90 E-value=6.5e-24 Score=198.45 Aligned_cols=196 Identities=18% Similarity=0.169 Sum_probs=142.7
Q ss_pred chhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCee
Q 040540 450 DSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPII 529 (669)
Q Consensus 450 ~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~ 529 (669)
.+|+.++++++|+|+|.++..|......++|+|||+..-|.+ |.+....++.....+|..|+++|+.|+| +..+|
T Consensus 49 lREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~e-Le~~p~G~~~~~vk~~l~Q~l~ai~~cH----k~n~I 123 (396)
T KOG0593|consen 49 LREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHE-LERYPNGVPSELVKKYLYQLLKAIHFCH----KNNCI 123 (396)
T ss_pred HHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHHHHH-HHhccCCCCHHHHHHHHHHHHHHhhhhh----hcCee
Confidence 468999999999999999999999999999999999754444 4444556888888899999999999999 45799
Q ss_pred ecCCCCc-------------------------ccccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 530 HCEGEDS-------------------------VTQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 530 h~d~~~~-------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
|||+|+. ...+..+.|.+|.|||.+.+ .+|+.++||||.||++.||+||.+-|.
T Consensus 124 HRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~P 203 (396)
T KOG0593|consen 124 HRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWP 203 (396)
T ss_pred cccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCC
Confidence 9999964 12344578999999999877 779999999999999999999998775
Q ss_pred cCCCCCccHHHHHHHhC---CCCccc----------cccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 040540 584 EMFTGEMSLRRWVKESL---PHRLSE----------VVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650 (669)
Q Consensus 584 ~~~~~~~~l~~~~~~~~---~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v 650 (669)
+. .+.+..-.++..+ .++... +.-|......+....-......+.+++.+|+..||++|++.+++
T Consensus 204 G~--SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~ql 281 (396)
T KOG0593|consen 204 GR--SDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQL 281 (396)
T ss_pred Cc--chHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHH
Confidence 52 2222222222211 111111 11122211111111112344467899999999999999999998
Q ss_pred HH
Q 040540 651 AA 652 (669)
Q Consensus 651 ~~ 652 (669)
+.
T Consensus 282 l~ 283 (396)
T KOG0593|consen 282 LH 283 (396)
T ss_pred hc
Confidence 64
No 83
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.90 E-value=9.9e-24 Score=212.05 Aligned_cols=189 Identities=25% Similarity=0.412 Sum_probs=144.1
Q ss_pred ccCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCC---------------CccCHHHHHHHHH
Q 040540 447 RSFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMI 510 (669)
Q Consensus 447 ~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~ 510 (669)
+.+..|+..+.++ +|||++++++.|...+..+++|||+++|+|.++++... ..+++.+...++.
T Consensus 40 ~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 119 (270)
T cd05047 40 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 119 (270)
T ss_pred HHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHH
Confidence 3566788889888 79999999999998888999999999999999997532 2478889999999
Q ss_pred hHHhhhhhhhcCCCCCCeeecCCCCccc------------------------ccccccccccCccccccCCCcCccccch
Q 040540 511 DVGSALEYLRHGHSSAPIIHCEGEDSVT------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVY 566 (669)
Q Consensus 511 ~i~~~l~~lh~~~~~~~i~h~d~~~~~~------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~ 566 (669)
+++.|++|||. .+++|+|+++... ......+..|+|||+.....++.++|||
T Consensus 120 ~i~~al~~lH~----~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~ 195 (270)
T cd05047 120 DVARGMDYLSQ----KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVW 195 (270)
T ss_pred HHHHHHHHHHH----CCEeecccccceEEEcCCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHH
Confidence 99999999994 5899999995410 0001124569999999888899999999
Q ss_pred hhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC
Q 040540 567 SYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM 645 (669)
Q Consensus 567 s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp 645 (669)
||||++|||+| |+.||..... .......... .. . . .+......+.+++.+||..+|.+||
T Consensus 196 slG~il~el~~~g~~pf~~~~~-----~~~~~~~~~~-~~--~--~---------~~~~~~~~~~~li~~~l~~~p~~Rp 256 (270)
T cd05047 196 SYGVLLWEIVSLGGTPYCGMTC-----AELYEKLPQG-YR--L--E---------KPLNCDDEVYDLMRQCWREKPYERP 256 (270)
T ss_pred HHHHHHHHHHcCCCCCccccCH-----HHHHHHHhCC-CC--C--C---------CCCcCCHHHHHHHHHHcccChhhCC
Confidence 99999999997 9999865321 1111111110 00 0 0 0112234578999999999999999
Q ss_pred CHHHHHHHHHHhH
Q 040540 646 HMTDAAAKLKKIK 658 (669)
Q Consensus 646 s~~~v~~~l~~~~ 658 (669)
++.|+++.|+++.
T Consensus 257 s~~~il~~l~~~~ 269 (270)
T cd05047 257 SFAQILVSLNRML 269 (270)
T ss_pred CHHHHHHHHHHhh
Confidence 9999999998763
No 84
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.90 E-value=7.8e-24 Score=212.46 Aligned_cols=188 Identities=26% Similarity=0.440 Sum_probs=147.2
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..+..++|||++++++++...+..++||||+++++|.+++......+++.+...|+.+++.|+.|||. .
T Consensus 50 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~----~ 125 (267)
T cd05066 50 RDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSD----M 125 (267)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 356778889999999999999999988889999999999999999998765668999999999999999999994 4
Q ss_pred CeeecCCCCccc---------------------c-----cc--cccccccCccccccCCCcCccccchhhHHHHHHHHh-
Q 040540 527 PIIHCEGEDSVT---------------------Q-----TT--TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT- 577 (669)
Q Consensus 527 ~i~h~d~~~~~~---------------------~-----~~--~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t- 577 (669)
+++|+|+++... . .. ..++..|+|||+..+..++.++|||||||++||+++
T Consensus 126 ~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~ 205 (267)
T cd05066 126 GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY 205 (267)
T ss_pred CEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcC
Confidence 799999985310 0 00 012457999999988889999999999999999887
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
|+.||..... ......+....+ .+.+...+..+.+++.+|++.+|.+||+|.++++.|+++
T Consensus 206 g~~p~~~~~~--~~~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 206 GERPYWEMSN--QDVIKAIEEGYR-----------------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCCCcccCCH--HHHHHHHhCCCc-----------------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 9999865321 122222221110 001122345678999999999999999999999999875
No 85
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.90 E-value=4.4e-24 Score=219.15 Aligned_cols=177 Identities=22% Similarity=0.192 Sum_probs=138.0
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.++..++|||++++++.+......++||||+++|+|.+++... ..+++.....++.++++|+.|||. .+
T Consensus 39 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~----~~ 113 (312)
T cd05585 39 HTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQRE-GRFDLSRARFYTAELLCALENLHK----FN 113 (312)
T ss_pred HHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 4556888999999999999999999888999999999999999999753 458889999999999999999994 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
|+|||+|+.. ......||+.|+|||++.+..++.++|||||||++|||+||+.||
T Consensus 114 i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf 193 (312)
T cd05585 114 VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPF 193 (312)
T ss_pred eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCc
Confidence 9999998430 011235899999999999888999999999999999999999998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
.... ..+.......... ..+......+.+++.+||+.||++||++.+
T Consensus 194 ~~~~-----~~~~~~~~~~~~~---------------~~~~~~~~~~~~li~~~L~~dp~~R~~~~~ 240 (312)
T cd05585 194 YDEN-----VNEMYRKILQEPL---------------RFPDGFDRDAKDLLIGLLSRDPTRRLGYNG 240 (312)
T ss_pred CCCC-----HHHHHHHHHcCCC---------------CCCCcCCHHHHHHHHHHcCCCHHHcCCCCC
Confidence 6521 1111111111100 001223356789999999999999986433
No 86
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.90 E-value=1e-23 Score=210.86 Aligned_cols=188 Identities=26% Similarity=0.412 Sum_probs=145.6
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+.+..|+..+++++|+|++++++++...+..+++|||+++++|.+++.... ..+++.....++.+++.|+.|||.
T Consensus 46 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---- 121 (261)
T cd05068 46 KDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA---- 121 (261)
T ss_pred HHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh----
Confidence 356678999999999999999999988888999999999999999997543 468999999999999999999995
Q ss_pred CCeeecCCCCccc-----------------------cccccc---ccccCccccccCCCcCccccchhhHHHHHHHHh-C
Q 040540 526 APIIHCEGEDSVT-----------------------QTTTMA---TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-R 578 (669)
Q Consensus 526 ~~i~h~d~~~~~~-----------------------~~~~~g---t~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g 578 (669)
.+++|+|+++... .....| +..|+|||+.....++.++|||||||++|||+| |
T Consensus 122 ~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g 201 (261)
T cd05068 122 QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYG 201 (261)
T ss_pred CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcC
Confidence 4799999985410 000112 246999999988889999999999999999999 9
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
+.||..... ..+...+....+. +.+...+..+.+++.+|++.+|++||+|.++++.|+++
T Consensus 202 ~~p~~~~~~--~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 202 RMPYPGMTN--AEVLQQVDQGYRM-----------------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred CCCCCCCCH--HHHHHHHHcCCCC-----------------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 999865321 1111111111000 01122345678999999999999999999999999863
No 87
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.90 E-value=6.3e-25 Score=240.66 Aligned_cols=184 Identities=22% Similarity=0.272 Sum_probs=144.0
Q ss_pred cccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+.....|+.++..+.|||+|+++|...+++..+|.||||.+|+|.+.+. ++...++.-...+..|++.|+.|||..
T Consensus 1278 ~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~-~gri~dE~vt~vyt~qll~gla~LH~~--- 1353 (1509)
T KOG4645|consen 1278 FKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLE-HGRIEDEMVTRVYTKQLLEGLAYLHEH--- 1353 (1509)
T ss_pred CcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHH-hcchhhhhHHHHHHHHHHHHHHHHHhc---
Confidence 4456779999999999999999999999999999999999999999997 455566666667889999999999954
Q ss_pred CCeeecCCCCcc-----------------------------cccccccccccCccccccCC---CcCccccchhhHHHHH
Q 040540 526 APIIHCEGEDSV-----------------------------TQTTTMATIGYMAPEYGSEG---IVSAKCDVYSYGVLLM 573 (669)
Q Consensus 526 ~~i~h~d~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~s~Gvil~ 573 (669)
+|+|||+|+.. ......||+.|||||++.+. ....++||||+|||+.
T Consensus 1354 -gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVl 1432 (1509)
T KOG4645|consen 1354 -GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVL 1432 (1509)
T ss_pred -CceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEE
Confidence 79999999530 01123599999999999764 3667999999999999
Q ss_pred HHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 574 ETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 574 el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
||+||+.||..... ...+.-.|..+.-+.+ |........+++.+|+..||..|.++.|+++
T Consensus 1433 EM~tGkrPW~~~dn-e~aIMy~V~~gh~Pq~-----------------P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1433 EMATGKRPWAELDN-EWAIMYHVAAGHKPQI-----------------PERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred EeecCCCchhhccc-hhHHHhHHhccCCCCC-----------------chhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 99999999987532 3333333433332111 2234556789999999999999988776543
No 88
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.90 E-value=9.3e-24 Score=212.19 Aligned_cols=188 Identities=22% Similarity=0.423 Sum_probs=147.3
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.|..|+..++.++|||++++.+.+......++||||+++|+|.++++.....+++.++..++.+++.|+.|||. .
T Consensus 50 ~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~----~ 125 (269)
T cd05065 50 RDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSE----M 125 (269)
T ss_pred HHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 456778999999999999999999988888999999999999999998655668999999999999999999994 4
Q ss_pred CeeecCCCCccc---------------------------ccccc---cccccCccccccCCCcCccccchhhHHHHHHHH
Q 040540 527 PIIHCEGEDSVT---------------------------QTTTM---ATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 527 ~i~h~d~~~~~~---------------------------~~~~~---gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~ 576 (669)
+++|+|+++... ..... ++..|+|||++....++.++|||||||++||++
T Consensus 126 g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l 205 (269)
T cd05065 126 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 205 (269)
T ss_pred CEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHh
Confidence 899999985310 00001 134699999998888999999999999999988
Q ss_pred h-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHH
Q 040540 577 T-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655 (669)
Q Consensus 577 t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~ 655 (669)
+ |+.||.... ......++....+ .+.+.+++..+.+++.+||+.+|++||+|.+|+..|+
T Consensus 206 ~~g~~p~~~~~--~~~~~~~i~~~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 266 (269)
T cd05065 206 SYGERPYWDMS--NQDVINAIEQDYR-----------------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLD 266 (269)
T ss_pred cCCCCCCCCCC--HHHHHHHHHcCCc-----------------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 7 999986532 1223333321110 0112233456789999999999999999999999988
Q ss_pred Hh
Q 040540 656 KI 657 (669)
Q Consensus 656 ~~ 657 (669)
++
T Consensus 267 ~~ 268 (269)
T cd05065 267 KM 268 (269)
T ss_pred hh
Confidence 75
No 89
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.90 E-value=7.7e-24 Score=215.23 Aligned_cols=190 Identities=25% Similarity=0.410 Sum_probs=147.2
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-----------------------CCccCHH
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-----------------------NYFLDIL 503 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-----------------------~~~l~~~ 503 (669)
+.+..|+..+..++|||++++++.|......++++||+++|+|.+++... ...+++.
T Consensus 48 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 127 (290)
T cd05045 48 RDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMG 127 (290)
T ss_pred HHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHH
Confidence 45667899999999999999999999888999999999999999998642 1247788
Q ss_pred HHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccC
Q 040540 504 ERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSE 556 (669)
Q Consensus 504 ~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~ 556 (669)
....++.+++.|++|||+ .+++|+|+++... .....++..|+|||+..+
T Consensus 128 ~~~~i~~~i~~~l~~LH~----~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~ 203 (290)
T cd05045 128 DLISFAWQISRGMQYLAE----MKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD 203 (290)
T ss_pred HHHHHHHHHHHHHHHHHH----CCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc
Confidence 899999999999999994 4799999985310 001124568999999888
Q ss_pred CCcCccccchhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhh
Q 040540 557 GIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALD 635 (669)
Q Consensus 557 ~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 635 (669)
..++.++||||||+++|||+| |+.||.... ...+..++...... +.+......+.+++.+
T Consensus 204 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~i~~ 264 (290)
T cd05045 204 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA--PERLFNLLKTGYRM-----------------ERPENCSEEMYNLMLT 264 (290)
T ss_pred CCcchHhHHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHhCCCCC-----------------CCCCCCCHHHHHHHHH
Confidence 889999999999999999999 999986532 11222222211110 0012233467899999
Q ss_pred cccCCCCCCCCHHHHHHHHHHhHH
Q 040540 636 CCMESPDKRMHMTDAAAKLKKIKV 659 (669)
Q Consensus 636 c~~~~P~~Rps~~~v~~~l~~~~~ 659 (669)
||+.+|++||++.|+++.|+++..
T Consensus 265 cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 265 CWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HccCCcccCCCHHHHHHHHHHHHh
Confidence 999999999999999999998754
No 90
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.90 E-value=1.3e-23 Score=217.64 Aligned_cols=190 Identities=23% Similarity=0.389 Sum_probs=143.8
Q ss_pred cCchhhhhhccc-cccccceeccccccc-cccceeeccCCCCChHHhhhcCC----------------------------
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSNP-DFKALVLEFMPNGSLEKWLYSHN---------------------------- 497 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~~-~~~~lv~ey~~~g~L~~~l~~~~---------------------------- 497 (669)
.+..|+..+..+ +|+|+++++++|... ...+++|||+++|+|.+++....
T Consensus 56 ~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (337)
T cd05054 56 ALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDS 135 (337)
T ss_pred HHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhcccccccccccccccccccccccccccccc
Confidence 455688888888 799999999988654 55789999999999999986321
Q ss_pred --------------------------------CccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCccc-------
Q 040540 498 --------------------------------YFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVT------- 538 (669)
Q Consensus 498 --------------------------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~~~------- 538 (669)
..++|..+..++.++++|++|||. .+|+|||+|+...
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~----~~ivHrDikp~Nill~~~~~ 211 (337)
T cd05054 136 VSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLAS----RKCIHRDLAARNILLSENNV 211 (337)
T ss_pred CCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHh----CCeecCCCCcceEEEeCCCc
Confidence 257888999999999999999994 4899999995410
Q ss_pred --------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHH
Q 040540 539 --------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVK 597 (669)
Q Consensus 539 --------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~ 597 (669)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||......+ .+.....
T Consensus 212 vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~ 290 (337)
T cd05054 212 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLK 290 (337)
T ss_pred EEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHh
Confidence 001124568999999999899999999999999999998 999986532211 1222111
Q ss_pred HhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhHH
Q 040540 598 ESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIKV 659 (669)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~~ 659 (669)
..... . .+......+.+++.+||+.+|++||++.|+++.|+++.+
T Consensus 291 ~~~~~----~-------------~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 291 EGTRM----R-------------APEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred ccCCC----C-------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11100 0 011234567899999999999999999999999998764
No 91
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.90 E-value=4.2e-24 Score=220.36 Aligned_cols=180 Identities=19% Similarity=0.169 Sum_probs=141.0
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.++..++|||++++++.+...+..++||||+++|+|.+++... ..+++.....++.|+++||+|||. .+
T Consensus 41 ~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~----~~ 115 (323)
T cd05571 41 HTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHS----CD 115 (323)
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 3456888999999999999999999889999999999999999999753 468899999999999999999995 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
|+|||+|+.. ......||+.|+|||++.+..++.++||||+||++|||+||+.||
T Consensus 116 ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf 195 (323)
T cd05571 116 VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 195 (323)
T ss_pred eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCC
Confidence 9999998430 011235899999999999888999999999999999999999998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM-----HMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp-----s~~~v~~ 652 (669)
.... ...+...+.. ... . .+......+.+++.+|++.||++|| ++.++++
T Consensus 196 ~~~~--~~~~~~~~~~---~~~------~---------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 196 YNQD--HEKLFELILM---EEI------R---------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCC--HHHHHHHHHc---CCC------C---------CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 6521 1111111111 000 0 0112344578999999999999999 7888764
No 92
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.90 E-value=6.8e-24 Score=219.40 Aligned_cols=206 Identities=20% Similarity=0.248 Sum_probs=144.4
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|+.+++.++|||++++++++..++..++||||+++|+|.+++..+ ...+++.....++.|+++||+|||. .
T Consensus 45 ~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~----~ 120 (327)
T cd08227 45 FLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHH----M 120 (327)
T ss_pred HHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 4556888899999999999999999999999999999999999999653 3458899999999999999999994 4
Q ss_pred CeeecCCCCccc--------------------------------ccccccccccCccccccC--CCcCccccchhhHHHH
Q 040540 527 PIIHCEGEDSVT--------------------------------QTTTMATIGYMAPEYGSE--GIVSAKCDVYSYGVLL 572 (669)
Q Consensus 527 ~i~h~d~~~~~~--------------------------------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gvil 572 (669)
+++|+|+|+... .....++..|+|||++.+ ..++.++|||||||++
T Consensus 121 ~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il 200 (327)
T cd08227 121 GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA 200 (327)
T ss_pred CEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHH
Confidence 799999985410 001135667999999876 4588999999999999
Q ss_pred HHHHhCCCCCCcCCCCCccHHHHHHHhCCCCcc---------------ccccccc------------cchhhhhhhhHHH
Q 040540 573 METFTRKRPTDEMFTGEMSLRRWVKESLPHRLS---------------EVVDTNL------------VREEQAFSAKMDC 625 (669)
Q Consensus 573 ~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~---------------~~~~~~~------------~~~~~~~~~~~~~ 625 (669)
|||++|+.||....... ..........+.... ...+... .......+.....
T Consensus 201 ~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (327)
T cd08227 201 CELANGHVPFKDMPATQ-MLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTF 279 (327)
T ss_pred HHHHHCCCCCCCcchhH-HHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCccccccccc
Confidence 99999999997532211 111111111110000 0000000 0000001112234
Q ss_pred HHHHHHHHhhcccCCCCCCCCHHHHHH--HHHHhH
Q 040540 626 LLSIMDLALDCCMESPDKRMHMTDAAA--KLKKIK 658 (669)
Q Consensus 626 ~~~~~~l~~~c~~~~P~~Rps~~~v~~--~l~~~~ 658 (669)
...+.+++.+||+.||++|||++|+++ .+++++
T Consensus 280 ~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 280 SPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred CHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 567889999999999999999999986 344443
No 93
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.90 E-value=1.2e-23 Score=214.97 Aligned_cols=189 Identities=21% Similarity=0.347 Sum_probs=146.1
Q ss_pred ccCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 447 RSFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 447 ~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
+.+..|+.+++++ +|+|++++++++......+++|||+++|+|.++++... ..+++.+...++.++++|++|+|.
T Consensus 83 ~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~--- 159 (302)
T cd05055 83 EALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLAS--- 159 (302)
T ss_pred HHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---
Confidence 3566789999999 79999999999998888999999999999999997533 348999999999999999999994
Q ss_pred CCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 525 SAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 525 ~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
.+++|+|+++... .....++..|+|||.+....++.++|||||||++|||+|
T Consensus 160 -~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t 238 (302)
T cd05055 160 -KNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 238 (302)
T ss_pred -CCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHh
Confidence 4799999985410 001124567999999988889999999999999999998
Q ss_pred -CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHH
Q 040540 578 -RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKK 656 (669)
Q Consensus 578 -g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~ 656 (669)
|+.||....... .+........+.. .+......+.+++.+|+..+|++||++.|+++.|++
T Consensus 239 ~g~~p~~~~~~~~-~~~~~~~~~~~~~-----------------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 239 LGSNPYPGMPVDS-KFYKLIKEGYRMA-----------------QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CCCCCcCCCCchH-HHHHHHHcCCcCC-----------------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 999986532211 1222221111000 011223467899999999999999999999999987
Q ss_pred h
Q 040540 657 I 657 (669)
Q Consensus 657 ~ 657 (669)
.
T Consensus 301 ~ 301 (302)
T cd05055 301 Q 301 (302)
T ss_pred h
Confidence 4
No 94
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.90 E-value=4.5e-24 Score=215.71 Aligned_cols=183 Identities=18% Similarity=0.207 Sum_probs=149.3
Q ss_pred cCchhhhhhccccccccceeccccccccc-cceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDF-KALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
.-..|+..+++++|||+|.+.+.+..++. .+|||+||+||++.+.+.+.+ ..+++....+++.|+..|+.|||.
T Consensus 49 ~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~---- 124 (426)
T KOG0589|consen 49 SAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHE---- 124 (426)
T ss_pred HHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh----
Confidence 34568999999999999999999988777 899999999999999998644 567888889999999999999993
Q ss_pred CCeeecCCCCc-------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCC
Q 040540 526 APIIHCEGEDS-------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 526 ~~i~h~d~~~~-------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
..|+|||+|.. ....+.+||+.||.||++.+..|+.|+||||+||++|||++-+.
T Consensus 125 ~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~ 204 (426)
T KOG0589|consen 125 NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKP 204 (426)
T ss_pred hhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhccc
Confidence 57999999832 12344579999999999999999999999999999999999999
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
+|.+... ...+.+-.+. .+ .+.+...+.++..++..|+..+|..||++.+++.+
T Consensus 205 aF~a~~m-----~~Li~ki~~~----~~----------~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 205 AFKASNM-----SELILKINRG----LY----------SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ccCccch-----HHHHHHHhhc----cC----------CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 9976332 2222211111 11 12244566778899999999999999999999987
No 95
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.90 E-value=1.1e-23 Score=210.54 Aligned_cols=187 Identities=26% Similarity=0.445 Sum_probs=146.4
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhc-CCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS-HNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|+..++.++|+|++++++++......++||||+++|+|.+++++ .+..+++.....++.++++|+.|||. .
T Consensus 48 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~----~ 123 (261)
T cd05148 48 DFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEE----Q 123 (261)
T ss_pred HHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 466788899999999999999999988899999999999999999986 33468999999999999999999994 4
Q ss_pred CeeecCCCCccc-------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-CCC
Q 040540 527 PIIHCEGEDSVT-------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKR 580 (669)
Q Consensus 527 ~i~h~d~~~~~~-------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~ 580 (669)
+++|+|+++... .....++..|+|||......++.++||||||+++|||++ |+.
T Consensus 124 ~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~ 203 (261)
T cd05148 124 NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQV 203 (261)
T ss_pred CeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence 799999985410 001124567999999988889999999999999999998 899
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
||.... .......+...... +.+..++..+.+++.+||+.||++|||++++++.|+.+
T Consensus 204 p~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 204 PYPGMN--NHEVYDQITAGYRM-----------------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred CCCcCC--HHHHHHHHHhCCcC-----------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 986532 11122222211110 01123345678999999999999999999999999864
No 96
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.90 E-value=4.3e-24 Score=216.43 Aligned_cols=202 Identities=24% Similarity=0.394 Sum_probs=143.7
Q ss_pred ccCchhhhhhccccccccceecccccc--ccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSN--PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
+.+..|+..+..++|+|++++++++.. ....++|+||+++|+|.+++.+....+++..+..++.++++|++|||.
T Consensus 50 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~--- 126 (284)
T cd05081 50 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGS--- 126 (284)
T ss_pred HHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH---
Confidence 356778999999999999999987654 345789999999999999997655668999999999999999999994
Q ss_pred CCCeeecCCCCccc--------------c--------------cccccccccCccccccCCCcCccccchhhHHHHHHHH
Q 040540 525 SAPIIHCEGEDSVT--------------Q--------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 525 ~~~i~h~d~~~~~~--------------~--------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~ 576 (669)
.+++|+|+|+... . ....++..|+|||+..+..++.++|||||||++|||+
T Consensus 127 -~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 205 (284)
T cd05081 127 -KRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 205 (284)
T ss_pred -CCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHh
Confidence 4799999985310 0 0001234599999998888999999999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHHhCCCCcccccccc---ccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTN---LVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
+|..|+...... +................ ......+.+.+...+..+.+++.+||..+|++||||.||++.
T Consensus 206 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 206 TYSDKSCSPPAE------FMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred hcCCcCCCcchh------hhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 998775432110 00000000000000000 000001111123345678999999999999999999999999
Q ss_pred HHHhH
Q 040540 654 LKKIK 658 (669)
Q Consensus 654 l~~~~ 658 (669)
|++++
T Consensus 280 l~~~~ 284 (284)
T cd05081 280 VEAIR 284 (284)
T ss_pred HHhcC
Confidence 98763
No 97
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.90 E-value=4.7e-24 Score=216.71 Aligned_cols=180 Identities=19% Similarity=0.213 Sum_probs=140.4
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.++..++|||++++++.+......++||||+++|+|.++++.. ..+++.....++.++++|++|||. .+
T Consensus 47 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~----~~ 121 (291)
T cd05612 47 HVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHS----KE 121 (291)
T ss_pred HHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 4667899999999999999999998888999999999999999999754 457888889999999999999994 48
Q ss_pred eeecCCCCcc----------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcC
Q 040540 528 IIHCEGEDSV----------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 585 (669)
Q Consensus 528 i~h~d~~~~~----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 585 (669)
++|+|+++.. ......||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 122 i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~ 201 (291)
T cd05612 122 IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD 201 (291)
T ss_pred eeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999998531 011235899999999998888999999999999999999999998653
Q ss_pred CCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC-----HHHHHH
Q 040540 586 FTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH-----MTDAAA 652 (669)
Q Consensus 586 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps-----~~~v~~ 652 (669)
.. ....+.+..... . .+......+.+++.+|++.||.+||+ +.|+++
T Consensus 202 ~~--~~~~~~i~~~~~---------~---------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 202 NP--FGIYEKILAGKL---------E---------FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred CH--HHHHHHHHhCCc---------C---------CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 21 111111111100 0 01122345789999999999999995 666654
No 98
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.90 E-value=1.5e-23 Score=210.71 Aligned_cols=186 Identities=24% Similarity=0.423 Sum_probs=143.8
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC------CCccCHHHHHHHHHhHHhhhhhhhc
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH------NYFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~------~~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
.+..|+..++.++|+|+++++++|......+++|||+++|+|.+++++. ...+++.++..++.++++|++|+|.
T Consensus 45 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~ 124 (269)
T cd05044 45 EFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ 124 (269)
T ss_pred HHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh
Confidence 4667899999999999999999998888899999999999999999752 2347888999999999999999994
Q ss_pred CCCCCCeeecCCCCcccc--------------------------------cccccccccCccccccCCCcCccccchhhH
Q 040540 522 GHSSAPIIHCEGEDSVTQ--------------------------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYG 569 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~~~--------------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G 569 (669)
.+++|+|+++.... ....++..|+|||++.+..++.++||||||
T Consensus 125 ----~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 200 (269)
T cd05044 125 ----MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFG 200 (269)
T ss_pred ----CCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHH
Confidence 47999998843100 001235679999999888899999999999
Q ss_pred HHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH
Q 040540 570 VLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMT 648 (669)
Q Consensus 570 vil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~ 648 (669)
|++|||+| |+.||.... .......+.... . ...+...+..+.+++.+||+.+|++||++.
T Consensus 201 ~il~ellt~g~~p~~~~~--~~~~~~~~~~~~--~---------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 261 (269)
T cd05044 201 VLMWEILTLGQQPYPALN--NQEVLQHVTAGG--R---------------LQKPENCPDKIYQLMTNCWAQDPSERPTFD 261 (269)
T ss_pred HHHHHHHHcCCCCCcccC--HHHHHHHHhcCC--c---------------cCCcccchHHHHHHHHHHcCCCcccCCCHH
Confidence 99999998 999986422 111222211110 0 011223445678999999999999999999
Q ss_pred HHHHHHHH
Q 040540 649 DAAAKLKK 656 (669)
Q Consensus 649 ~v~~~l~~ 656 (669)
+|.+.|++
T Consensus 262 ~i~~~l~~ 269 (269)
T cd05044 262 RIQEILQN 269 (269)
T ss_pred HHHHHHhC
Confidence 99998863
No 99
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.90 E-value=9.8e-24 Score=210.44 Aligned_cols=186 Identities=20% Similarity=0.333 Sum_probs=142.7
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+.++..++|+|++++++.+. .+..++||||+++|+|.+++... ..+++.....++.|++.|++|+|. .
T Consensus 41 ~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~----~ 114 (257)
T cd05116 41 DELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEE----T 114 (257)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 45677889999999999999999875 44568999999999999999753 458899999999999999999994 4
Q ss_pred CeeecCCCCccc----------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-
Q 040540 527 PIIHCEGEDSVT----------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT- 577 (669)
Q Consensus 527 ~i~h~d~~~~~~----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t- 577 (669)
+++|+|+++... .....++..|+|||......++.++|||||||++|||+|
T Consensus 115 ~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~ 194 (257)
T cd05116 115 NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSY 194 (257)
T ss_pred CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhC
Confidence 799999985310 001113468999999887888999999999999999998
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
|+.||..... ..+...+...... . .+...+..+.+++.+||+.||++||+|.+|.++|+..
T Consensus 195 g~~p~~~~~~--~~~~~~i~~~~~~--------~---------~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 195 GQKPYKGMKG--NEVTQMIESGERM--------E---------CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCCCCCCCH--HHHHHHHHCCCCC--------C---------CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 9999875321 1222222221100 0 0112345678999999999999999999999999763
No 100
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.90 E-value=1.2e-23 Score=209.82 Aligned_cols=187 Identities=23% Similarity=0.389 Sum_probs=145.0
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..+..+.|+|++++++++. ....+++|||+++|+|.+++.... .+++..+..++.+++.|++|||. .
T Consensus 41 ~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~----~ 114 (257)
T cd05060 41 KEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLES----K 114 (257)
T ss_pred HHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhh----c
Confidence 35667889999999999999999876 445689999999999999998644 68999999999999999999994 4
Q ss_pred CeeecCCCCccc---------------------c-------cccccccccCccccccCCCcCccccchhhHHHHHHHHh-
Q 040540 527 PIIHCEGEDSVT---------------------Q-------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT- 577 (669)
Q Consensus 527 ~i~h~d~~~~~~---------------------~-------~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t- 577 (669)
+++|+|+++... . ....++..|+|||......++.++|||||||++|||++
T Consensus 115 ~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~ 194 (257)
T cd05060 115 HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSY 194 (257)
T ss_pred CeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcC
Confidence 799999985410 0 00012457999999988889999999999999999998
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
|+.||.... ...+..++....+. +.+...+..+.+++.+||..+|++||++.++++.|+++
T Consensus 195 g~~p~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 195 GAKPYGEMK--GAEVIAMLESGERL-----------------PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CCCCcccCC--HHHHHHHHHcCCcC-----------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 999987532 22233333222110 01122345678999999999999999999999999876
Q ss_pred H
Q 040540 658 K 658 (669)
Q Consensus 658 ~ 658 (669)
.
T Consensus 256 ~ 256 (257)
T cd05060 256 P 256 (257)
T ss_pred c
Confidence 4
No 101
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.90 E-value=1.3e-23 Score=208.61 Aligned_cols=185 Identities=25% Similarity=0.401 Sum_probs=144.2
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|+|++++++.|......++||||+++++|.+++......+++.....++.+++.|+.|+|. .+
T Consensus 38 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~----~~ 113 (250)
T cd05085 38 KFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLES----KN 113 (250)
T ss_pred HHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 46678899999999999999999998888999999999999999997655568899999999999999999994 47
Q ss_pred eeecCCCCccc--------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-CCC
Q 040540 528 IIHCEGEDSVT--------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKR 580 (669)
Q Consensus 528 i~h~d~~~~~~--------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~ 580 (669)
++|+|+++... .....++..|+|||+..+..++.++|||||||++||+++ |..
T Consensus 114 ~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~ 193 (250)
T cd05085 114 CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVC 193 (250)
T ss_pred eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCC
Confidence 99999985310 000123456999999988889999999999999999999 999
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~ 655 (669)
||..... ......+...... ..+...+..+.+++.+|++.+|++||++.|++++|+
T Consensus 194 p~~~~~~--~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 194 PYPGMTN--QQAREQVEKGYRM-----------------SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCCH--HHHHHHHHcCCCC-----------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 9865321 1111111111000 001123456789999999999999999999999875
No 102
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.90 E-value=1.2e-23 Score=215.49 Aligned_cols=193 Identities=23% Similarity=0.390 Sum_probs=147.8
Q ss_pred cCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCC---------------CccCHHHHHHHHHh
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMID 511 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ 511 (669)
.+..|+..+..+ +|+|+++++++|......++||||+++|+|.+++...+ ..+++.++.+++.+
T Consensus 69 ~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q 148 (307)
T cd05098 69 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQ 148 (307)
T ss_pred HHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHH
Confidence 456688888888 79999999999998889999999999999999997532 24788999999999
Q ss_pred HHhhhhhhhcCCCCCCeeecCCCCccc-------------------------ccc--cccccccCccccccCCCcCcccc
Q 040540 512 VGSALEYLRHGHSSAPIIHCEGEDSVT-------------------------QTT--TMATIGYMAPEYGSEGIVSAKCD 564 (669)
Q Consensus 512 i~~~l~~lh~~~~~~~i~h~d~~~~~~-------------------------~~~--~~gt~~y~aPE~~~~~~~~~~~D 564 (669)
++.|++|||. .+++|+|+++... ... ..++..|+|||+..+..++.++|
T Consensus 149 i~~aL~~lH~----~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 224 (307)
T cd05098 149 VARGMEYLAS----KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 224 (307)
T ss_pred HHHHHHHHHH----CCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHH
Confidence 9999999994 4899999985310 000 11345799999998888999999
Q ss_pred chhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCC
Q 040540 565 VYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDK 643 (669)
Q Consensus 565 v~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~ 643 (669)
||||||++|||++ |+.||..... ..+...+...... +.+......+.+++.+||..+|++
T Consensus 225 vwslG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~p~~ 285 (307)
T cd05098 225 VWSFGVLLWEIFTLGGSPYPGVPV--EELFKLLKEGHRM-----------------DKPSNCTNELYMMMRDCWHAVPSQ 285 (307)
T ss_pred HHHHHHHHHHHHcCCCCCCCcCCH--HHHHHHHHcCCCC-----------------CCCCcCCHHHHHHHHHHcccChhh
Confidence 9999999999998 8888754211 1111111111100 011233456789999999999999
Q ss_pred CCCHHHHHHHHHHhHHHhhh
Q 040540 644 RMHMTDAAAKLKKIKVKFLD 663 (669)
Q Consensus 644 Rps~~~v~~~l~~~~~~~~~ 663 (669)
||+|.+|++.|+++.+....
T Consensus 286 Rps~~evl~~l~~~~~~~~~ 305 (307)
T cd05098 286 RPTFKQLVEDLDRILALTSN 305 (307)
T ss_pred CcCHHHHHHHHHHHHHHhhc
Confidence 99999999999998876443
No 103
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.90 E-value=9.8e-24 Score=212.97 Aligned_cols=186 Identities=20% Similarity=0.363 Sum_probs=142.0
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC---------CccCHHHHHHHHHhHHhhhhh
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---------YFLDILERLNIMIDVGSALEY 518 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------~~l~~~~~~~i~~~i~~~l~~ 518 (669)
.+..|+..+..++|+|++++++.+......++||||+++|+|.+++++.. ...++.....++.++++|++|
T Consensus 55 ~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 134 (277)
T cd05062 55 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAY 134 (277)
T ss_pred HHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence 46678889999999999999999988888999999999999999997522 235778888999999999999
Q ss_pred hhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccccchhhHHH
Q 040540 519 LRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVL 571 (669)
Q Consensus 519 lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvi 571 (669)
||. .+++|+|+|+... .....++..|||||++.+..++.++|||||||+
T Consensus 135 lH~----~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 210 (277)
T cd05062 135 LNA----NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 210 (277)
T ss_pred HHH----CCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHH
Confidence 994 4799999985410 001124667999999988889999999999999
Q ss_pred HHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 040540 572 LMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650 (669)
Q Consensus 572 l~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v 650 (669)
+|||++ |..||..... ....+.+.... .. .. +...+..+.+++.+||+.+|++||++.|+
T Consensus 211 l~el~~~~~~p~~~~~~--~~~~~~~~~~~---~~-----~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~e~ 271 (277)
T cd05062 211 LWEIATLAEQPYQGMSN--EQVLRFVMEGG---LL-----DK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEI 271 (277)
T ss_pred HHHHHcCCCCCCCCCCH--HHHHHHHHcCC---cC-----CC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 999999 6888865321 11222211110 00 00 11233467899999999999999999999
Q ss_pred HHHHHH
Q 040540 651 AAKLKK 656 (669)
Q Consensus 651 ~~~l~~ 656 (669)
++.|++
T Consensus 272 l~~l~~ 277 (277)
T cd05062 272 ISSIKE 277 (277)
T ss_pred HHHhhC
Confidence 998863
No 104
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.90 E-value=1.3e-23 Score=213.96 Aligned_cols=188 Identities=24% Similarity=0.415 Sum_probs=144.9
Q ss_pred cCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcC---------------CCccCHHHHHHHHHh
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH---------------NYFLDILERLNIMID 511 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~---------------~~~l~~~~~~~i~~~ 511 (669)
.+..|+..+..+ +|+|++++++++......+++|||+++|+|.++++.. ...+++..+.+++.|
T Consensus 61 ~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 140 (293)
T cd05053 61 DLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQ 140 (293)
T ss_pred HHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHH
Confidence 466788888888 7999999999999888899999999999999999632 245788999999999
Q ss_pred HHhhhhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCcccc
Q 040540 512 VGSALEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCD 564 (669)
Q Consensus 512 i~~~l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~D 564 (669)
++.|+.|||. .+++|+|+++... .....++..|+|||+..+..++.++|
T Consensus 141 i~~al~~LH~----~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 216 (293)
T cd05053 141 VARGMEFLAS----KKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSD 216 (293)
T ss_pred HHHHHHHHHH----CCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccc
Confidence 9999999994 4799999985410 00012346799999988888999999
Q ss_pred chhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCC
Q 040540 565 VYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDK 643 (669)
Q Consensus 565 v~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~ 643 (669)
||||||++||+++ |..||..... ..+.+........ ..+..+...+.+++.+||..+|++
T Consensus 217 i~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~p~~ 277 (293)
T cd05053 217 VWSFGVLLWEIFTLGGSPYPGIPV--EELFKLLKEGYRM-----------------EKPQNCTQELYHLMRDCWHEVPSQ 277 (293)
T ss_pred eeehhhHHHHHhcCCCCCCCCCCH--HHHHHHHHcCCcC-----------------CCCCCCCHHHHHHHHHHcccCccc
Confidence 9999999999998 8888865321 1122211111100 011223456789999999999999
Q ss_pred CCCHHHHHHHHHHhH
Q 040540 644 RMHMTDAAAKLKKIK 658 (669)
Q Consensus 644 Rps~~~v~~~l~~~~ 658 (669)
||||.|+++.|+++.
T Consensus 278 Rps~~eil~~l~~~~ 292 (293)
T cd05053 278 RPTFKQLVEDLDRML 292 (293)
T ss_pred CcCHHHHHHHHHHhh
Confidence 999999999998864
No 105
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.90 E-value=2.1e-23 Score=208.80 Aligned_cols=189 Identities=20% Similarity=0.365 Sum_probs=141.9
Q ss_pred ccCchhhhhhccccccccceecccccc-ccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSN-PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+.+..|...++.++|||++++++.|.. +...++++||+++|+|.+++.+......+.....++.++++|+.|||.
T Consensus 41 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---- 116 (262)
T cd05058 41 EQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLAS---- 116 (262)
T ss_pred HHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh----
Confidence 356678888999999999999997753 556789999999999999998655557788889999999999999994
Q ss_pred CCeeecCCCCccc---------------c--------------cccccccccCccccccCCCcCccccchhhHHHHHHHH
Q 040540 526 APIIHCEGEDSVT---------------Q--------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 526 ~~i~h~d~~~~~~---------------~--------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~ 576 (669)
.+++|+|+++... . ....++..|+|||+.....++.++|||||||++|||+
T Consensus 117 ~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 196 (262)
T cd05058 117 KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 196 (262)
T ss_pred CCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHH
Confidence 4799999985410 0 0112456799999998888999999999999999999
Q ss_pred hC-CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHH
Q 040540 577 TR-KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655 (669)
Q Consensus 577 tg-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~ 655 (669)
+| ..||... ....+...+....+... +...+..+.+++.+||..+|++||++.||++.|+
T Consensus 197 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~ 257 (262)
T cd05058 197 TRGAPPYPDV--DSFDITVYLLQGRRLLQ-----------------PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIE 257 (262)
T ss_pred cCCCCCCCCC--CHHHHHHHHhcCCCCCC-----------------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 95 5555432 11222222211110000 1112345789999999999999999999999998
Q ss_pred HhH
Q 040540 656 KIK 658 (669)
Q Consensus 656 ~~~ 658 (669)
++.
T Consensus 258 ~~~ 260 (262)
T cd05058 258 QIF 260 (262)
T ss_pred HHh
Confidence 874
No 106
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.89 E-value=3.3e-24 Score=216.55 Aligned_cols=196 Identities=23% Similarity=0.373 Sum_probs=150.9
Q ss_pred cccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCcc-CHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFL-DILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l-~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
.++|..|+.++.+++||||++++|.|..++..++++|||.+|+|.+++.++..+. +-....+|+.|||.|++||.
T Consensus 579 r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe---- 654 (807)
T KOG1094|consen 579 RNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE---- 654 (807)
T ss_pred HHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH----
Confidence 3578899999999999999999999999999999999999999999998754333 45566789999999999995
Q ss_pred CCCeeecCCCCcc---------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 525 SAPIIHCEGEDSV---------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 525 ~~~i~h~d~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
+..++|||+.... ....++-..+|||||.+.-++++.++|||+|||++||+++
T Consensus 655 s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~ 734 (807)
T KOG1094|consen 655 SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFM 734 (807)
T ss_pred hhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHH
Confidence 5689999987320 0011123468999999999999999999999999999976
Q ss_pred --CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHH
Q 040540 578 --RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655 (669)
Q Consensus 578 --g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~ 655 (669)
...||.....+ +..+-..+.++......+. +.+.-++..+.+++.+||..|..+||+++++..-|+
T Consensus 735 ~C~e~Py~~lt~e--~vven~~~~~~~~~~~~~l----------~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq 802 (807)
T KOG1094|consen 735 LCREQPYSQLTDE--QVVENAGEFFRDQGRQVVL----------SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQ 802 (807)
T ss_pred HHhhCchhhhhHH--HHHHhhhhhcCCCCcceec----------cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHH
Confidence 57798765332 2333333333322222221 124456778889999999999999999999988877
Q ss_pred Hh
Q 040540 656 KI 657 (669)
Q Consensus 656 ~~ 657 (669)
+.
T Consensus 803 ~~ 804 (807)
T KOG1094|consen 803 ED 804 (807)
T ss_pred Hh
Confidence 54
No 107
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.89 E-value=5.3e-24 Score=227.66 Aligned_cols=193 Identities=21% Similarity=0.272 Sum_probs=152.3
Q ss_pred cccccCchhhhhhcccc-ccccceeccc-ccc------ccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHh
Q 040540 444 LAFRSFDSECEVLRNVR-HRNLIKIISS-CSN------PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGS 514 (669)
Q Consensus 444 ~~~~~~~~e~~~l~~l~-h~niv~l~~~-~~~------~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~ 514 (669)
...+...+|+.+|+.++ |+|||.+++. ... ..++.|.||||++|.|-+++..+ ...+.+.+.++|+.|+++
T Consensus 76 ~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~ 155 (738)
T KOG1989|consen 76 EALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCE 155 (738)
T ss_pred HHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHH
Confidence 34566788999999997 9999999993 322 24567899999999999999742 224899999999999999
Q ss_pred hhhhhhcCCCCCCeeecCCCCcc----------------------cc------------cccccccccCcccccc---CC
Q 040540 515 ALEYLRHGHSSAPIIHCEGEDSV----------------------TQ------------TTTMATIGYMAPEYGS---EG 557 (669)
Q Consensus 515 ~l~~lh~~~~~~~i~h~d~~~~~----------------------~~------------~~~~gt~~y~aPE~~~---~~ 557 (669)
|+++||. +.+||||||+|-.. .. .....|+-|+|||+++ +.
T Consensus 156 AVa~mH~--~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~ 233 (738)
T KOG1989|consen 156 AVAAMHY--LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGL 233 (738)
T ss_pred HHHHHhc--CCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCC
Confidence 9999995 58999999999320 00 0112589999999874 45
Q ss_pred CcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcc
Q 040540 558 IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCC 637 (669)
Q Consensus 558 ~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~ 637 (669)
..++|+||||+||+||.++..+.||+... . -+|....+.+|..+..+..+.+||..|+
T Consensus 234 pI~eKsDIWALGclLYkLCy~t~PFe~sg--~--------------------laIlng~Y~~P~~p~ys~~l~~LI~~mL 291 (738)
T KOG1989|consen 234 PIGEKSDIWALGCLLYKLCYFTTPFEESG--K--------------------LAILNGNYSFPPFPNYSDRLKDLIRTML 291 (738)
T ss_pred CCcchhHHHHHHHHHHHHHHhCCCcCcCc--c--------------------eeEEeccccCCCCccHHHHHHHHHHHHh
Confidence 68999999999999999999999997631 1 1222333444555678889999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHhHHH
Q 040540 638 MESPDKRMHMTDAAAKLKKIKVK 660 (669)
Q Consensus 638 ~~~P~~Rps~~~v~~~l~~~~~~ 660 (669)
+.||++||.+.+|+..+.++..+
T Consensus 292 ~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 292 QPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred ccCcccCCCHHHHHHHHHHHhcC
Confidence 99999999999999998887644
No 108
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.89 E-value=1.3e-23 Score=217.62 Aligned_cols=133 Identities=23% Similarity=0.256 Sum_probs=115.0
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|+|+++++++|...+..++||||+++|+|.+++... ..+++.....++.++++|+.|||+. .+
T Consensus 49 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~~ 124 (333)
T cd06650 49 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK---HK 124 (333)
T ss_pred HHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhc---CC
Confidence 4667999999999999999999999999999999999999999999754 4578888889999999999999952 46
Q ss_pred eeecCCCCcc-----------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCc
Q 040540 528 IIHCEGEDSV-----------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE 584 (669)
Q Consensus 528 i~h~d~~~~~-----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 584 (669)
++|+|+|+.. ......||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 125 ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 125 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred EEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 9999998531 01122478899999999888899999999999999999999999865
No 109
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.89 E-value=5.9e-24 Score=215.77 Aligned_cols=199 Identities=16% Similarity=0.096 Sum_probs=140.7
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.++..++|+|++++++.+...+..++||||++++.+..+.. ....+++.....++.+++.|+.|||. .+
T Consensus 46 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~----~~ 120 (287)
T cd07848 46 TTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCHK----ND 120 (287)
T ss_pred hHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 45578999999999999999999998899999999999877665543 34568888999999999999999994 47
Q ss_pred eeecCCCCcc--------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 528 IIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 528 i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
++|+|+|+.. ......||..|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 121 i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~p 200 (287)
T cd07848 121 IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPL 200 (287)
T ss_pred eecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCC
Confidence 9999998430 00122488999999999888899999999999999999999999
Q ss_pred CCcCCCCCccHHH--HHHHhCCC----------Cccccccccccc-hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH
Q 040540 582 TDEMFTGEMSLRR--WVKESLPH----------RLSEVVDTNLVR-EEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMT 648 (669)
Q Consensus 582 ~~~~~~~~~~l~~--~~~~~~~~----------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~ 648 (669)
|....... .+.. ......+. .......+.... ...........+..+.+++.+|++.||++|||++
T Consensus 201 f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~ 279 (287)
T cd07848 201 FPGESEID-QLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTE 279 (287)
T ss_pred CCCCCHHH-HHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHH
Confidence 97532111 1111 00000000 000000000000 0000011123456789999999999999999999
Q ss_pred HHHH
Q 040540 649 DAAA 652 (669)
Q Consensus 649 ~v~~ 652 (669)
|+++
T Consensus 280 ~~l~ 283 (287)
T cd07848 280 QCLN 283 (287)
T ss_pred HHhc
Confidence 9874
No 110
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.89 E-value=1.2e-23 Score=212.22 Aligned_cols=185 Identities=23% Similarity=0.375 Sum_probs=142.2
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC------CccCHHHHHHHHHhHHhhhhhhhc
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN------YFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~------~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
.+..|+..++.++|+|++++++++......++||||+++++|.+++...+ ..+++..+..++.++++|++|||.
T Consensus 55 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~ 134 (277)
T cd05036 55 DFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE 134 (277)
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46778889999999999999999888888899999999999999997532 258899999999999999999994
Q ss_pred CCCCCCeeecCCCCccccc------------------------------ccccccccCccccccCCCcCccccchhhHHH
Q 040540 522 GHSSAPIIHCEGEDSVTQT------------------------------TTMATIGYMAPEYGSEGIVSAKCDVYSYGVL 571 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~~~~------------------------------~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvi 571 (669)
.+++|+|+++..... ...++..|+|||++.+..++.++|||||||+
T Consensus 135 ----~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~i 210 (277)
T cd05036 135 ----NHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVL 210 (277)
T ss_pred ----CCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHH
Confidence 479999998541000 0011346999999988889999999999999
Q ss_pred HHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 040540 572 LMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650 (669)
Q Consensus 572 l~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v 650 (669)
+|||++ |+.||...... .+...+...... ..+...+..+.+++.+|++.+|++||++.+|
T Consensus 211 l~el~~~g~~pf~~~~~~--~~~~~~~~~~~~-----------------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~v 271 (277)
T cd05036 211 LWEIFSLGYMPYPGRTNQ--EVMEFVTGGGRL-----------------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATI 271 (277)
T ss_pred HHHHHcCCCCCCCCCCHH--HHHHHHHcCCcC-----------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 999997 99998753211 122211111000 0011233567899999999999999999999
Q ss_pred HHHHH
Q 040540 651 AAKLK 655 (669)
Q Consensus 651 ~~~l~ 655 (669)
++.|+
T Consensus 272 l~~l~ 276 (277)
T cd05036 272 LERIQ 276 (277)
T ss_pred HHHhh
Confidence 99875
No 111
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.89 E-value=1.9e-23 Score=211.61 Aligned_cols=187 Identities=22% Similarity=0.418 Sum_probs=143.3
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC----------------CCccCHHHHHHHHH
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH----------------NYFLDILERLNIMI 510 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~----------------~~~l~~~~~~~i~~ 510 (669)
..+..|+..++.++|+|++++++++......+++|||+++|+|.+++... ...+++.+...++.
T Consensus 52 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 131 (283)
T cd05090 52 GEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAI 131 (283)
T ss_pred HHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHH
Confidence 35667999999999999999999998888899999999999999998532 12477888899999
Q ss_pred hHHhhhhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccc
Q 040540 511 DVGSALEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKC 563 (669)
Q Consensus 511 ~i~~~l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~ 563 (669)
++++|++|||+ .+++|+|+++... .....++..|+|||+..+..++.++
T Consensus 132 ~i~~al~~lH~----~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 207 (283)
T cd05090 132 QIAAGMEYLSS----HFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDS 207 (283)
T ss_pred HHHHHHHHHHh----cCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchh
Confidence 99999999995 4799999985410 0111245579999999888899999
Q ss_pred cchhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCC
Q 040540 564 DVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPD 642 (669)
Q Consensus 564 Dv~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~ 642 (669)
|||||||++|||++ |..||.... ...+.+.+...... +.+......+.+++.+||+.||+
T Consensus 208 Dv~slG~il~el~~~g~~p~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~cl~~~p~ 268 (283)
T cd05090 208 DIWSFGVVLWEIFSFGLQPYYGFS--NQEVIEMVRKRQLL-----------------PCSEDCPPRMYSLMTECWQEGPS 268 (283)
T ss_pred hhHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHHcCCcC-----------------CCCCCCCHHHHHHHHHHcccCcc
Confidence 99999999999999 888986522 11122222211100 00112335678899999999999
Q ss_pred CCCCHHHHHHHHHH
Q 040540 643 KRMHMTDAAAKLKK 656 (669)
Q Consensus 643 ~Rps~~~v~~~l~~ 656 (669)
+||++.+|.+.|+.
T Consensus 269 ~Rp~~~~i~~~l~~ 282 (283)
T cd05090 269 RRPRFKDIHTRLRS 282 (283)
T ss_pred cCcCHHHHHHHhhc
Confidence 99999999998864
No 112
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.89 E-value=1.8e-23 Score=211.35 Aligned_cols=187 Identities=24% Similarity=0.416 Sum_probs=143.8
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC--------------CccCHHHHHHHHHhH
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN--------------YFLDILERLNIMIDV 512 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--------------~~l~~~~~~~i~~~i 512 (669)
..+..|+..+..++|+|++++++++......+++|||+++|+|.++++... ..+++..+..++.|+
T Consensus 52 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi 131 (280)
T cd05092 52 QDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQI 131 (280)
T ss_pred HHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHH
Confidence 357778999999999999999999988888899999999999999997532 247889999999999
Q ss_pred HhhhhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccccc
Q 040540 513 GSALEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCDV 565 (669)
Q Consensus 513 ~~~l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv 565 (669)
+.|++|||. .+++|+|+++... .....+++.|+|||...+..++.++||
T Consensus 132 ~~al~~LH~----~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 207 (280)
T cd05092 132 ASGMVYLAS----LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDI 207 (280)
T ss_pred HHHHHHHHH----CCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhH
Confidence 999999994 4799999985310 001123567999999988889999999
Q ss_pred hhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCC
Q 040540 566 YSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644 (669)
Q Consensus 566 ~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~R 644 (669)
|||||++|||++ |+.||..... ...........+.. .+..++..+.+++.+||+.||++|
T Consensus 208 ~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~~~li~~cl~~~P~~R 268 (280)
T cd05092 208 WSFGVVLWEIFTYGKQPWYQLSN--TEAIECITQGRELE-----------------RPRTCPPEVYAIMQGCWQREPQQR 268 (280)
T ss_pred HHHHHHHHHHHcCCCCCCccCCH--HHHHHHHHcCccCC-----------------CCCCCCHHHHHHHHHHccCChhhC
Confidence 999999999999 8989865321 11111111110000 011233457899999999999999
Q ss_pred CCHHHHHHHHHH
Q 040540 645 MHMTDAAAKLKK 656 (669)
Q Consensus 645 ps~~~v~~~l~~ 656 (669)
|++.||.+.|++
T Consensus 269 p~~~~l~~~l~~ 280 (280)
T cd05092 269 MVIKDIHSRLQA 280 (280)
T ss_pred CCHHHHHHHHhC
Confidence 999999998863
No 113
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.89 E-value=1.6e-23 Score=220.58 Aligned_cols=189 Identities=19% Similarity=0.332 Sum_probs=144.5
Q ss_pred cCchhhhhhcccc-ccccceeccccccccccceeeccCCCCChHHhhhcCC-----------------------------
Q 040540 448 SFDSECEVLRNVR-HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN----------------------------- 497 (669)
Q Consensus 448 ~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----------------------------- 497 (669)
.+..|+.++..+. |+|+++++++|......++||||+++|+|.++++..+
T Consensus 86 ~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (401)
T cd05107 86 ALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRK 165 (401)
T ss_pred HHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccc
Confidence 4667899999997 9999999999999889999999999999999996421
Q ss_pred --------------------------------------------------------------------CccCHHHHHHHH
Q 040540 498 --------------------------------------------------------------------YFLDILERLNIM 509 (669)
Q Consensus 498 --------------------------------------------------------------------~~l~~~~~~~i~ 509 (669)
..+++....+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 245 (401)
T cd05107 166 SHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFS 245 (401)
T ss_pred cchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHH
Confidence 135667788899
Q ss_pred HhHHhhhhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCcc
Q 040540 510 IDVGSALEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAK 562 (669)
Q Consensus 510 ~~i~~~l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~ 562 (669)
.++++|++|||. .+++|+|+|+... .....|+..|||||.+....++.+
T Consensus 246 ~qi~~aL~~LH~----~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 321 (401)
T cd05107 246 YQVANGMEFLAS----KNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTL 321 (401)
T ss_pred HHHHHHHHHHhc----CCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcH
Confidence 999999999994 4799999985310 011235678999999988889999
Q ss_pred ccchhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCC
Q 040540 563 CDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESP 641 (669)
Q Consensus 563 ~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P 641 (669)
+|||||||++|||++ |+.||....... .....+....+. +.+......+.+++.+||..+|
T Consensus 322 ~DvwslGvil~e~l~~g~~P~~~~~~~~-~~~~~~~~~~~~-----------------~~p~~~~~~l~~li~~cl~~~P 383 (401)
T cd05107 322 SDVWSFGILLWEIFTLGGTPYPELPMNE-QFYNAIKRGYRM-----------------AKPAHASDEIYEIMQKCWEEKF 383 (401)
T ss_pred hHHHHHHHHHHHHHHcCCCCCCCCCchH-HHHHHHHcCCCC-----------------CCCCCCCHHHHHHHHHHcCCCh
Confidence 999999999999998 888986532111 111111111100 0112234568899999999999
Q ss_pred CCCCCHHHHHHHHHHhH
Q 040540 642 DKRMHMTDAAAKLKKIK 658 (669)
Q Consensus 642 ~~Rps~~~v~~~l~~~~ 658 (669)
.+||+++|+++.|+++.
T Consensus 384 ~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 384 EIRPDFSQLVHLVGDLL 400 (401)
T ss_pred hHCcCHHHHHHHHHHHh
Confidence 99999999999998864
No 114
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.89 E-value=1.7e-23 Score=208.64 Aligned_cols=187 Identities=26% Similarity=0.356 Sum_probs=143.0
Q ss_pred cCchhhhhhccccccccceeccccc-cccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCS-NPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
.+..|+..++.++|++++++++++. .....+++|||+++++|.+++++.. ..+++.....++.+++.|++|||.
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---- 120 (256)
T cd05082 45 AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA---- 120 (256)
T ss_pred HHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh----
Confidence 4667899999999999999998764 4556789999999999999997643 347899999999999999999994
Q ss_pred CCeeecCCCCccc----------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-CCCCC
Q 040540 526 APIIHCEGEDSVT----------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPT 582 (669)
Q Consensus 526 ~~i~h~d~~~~~~----------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~ 582 (669)
.+++|+|+++... .....++..|+|||+.....++.++|||||||++|||++ |+.||
T Consensus 121 ~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~ 200 (256)
T cd05082 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200 (256)
T ss_pred CCEeccccchheEEEcCCCcEEecCCccceeccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCC
Confidence 4799999985410 011123557999999988889999999999999999998 99998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
.... ...+...+....+.. .+..++..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 201 ~~~~--~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 201 PRIP--LKDVVPRVEKGYKMD-----------------APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred CCCC--HHHHHHHHhcCCCCC-----------------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 6421 111222222111110 0123345678999999999999999999999998764
No 115
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.89 E-value=6.8e-24 Score=219.79 Aligned_cols=180 Identities=17% Similarity=0.129 Sum_probs=140.4
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.++..++|||++++++++......++||||+++|+|.+++.+. ..+++.....++.+++.|++|||. .+
T Consensus 77 ~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~----~~ 151 (340)
T PTZ00426 77 HVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQS----LN 151 (340)
T ss_pred HHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 4567899999999999999999999999999999999999999999754 458888899999999999999994 47
Q ss_pred eeecCCCCcc----------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcC
Q 040540 528 IIHCEGEDSV----------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 585 (669)
Q Consensus 528 i~h~d~~~~~----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 585 (669)
++|||+|+.. ......||+.|||||++.+..++.++|||||||++|||+||+.||...
T Consensus 152 ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 231 (340)
T PTZ00426 152 IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYAN 231 (340)
T ss_pred eEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCC
Confidence 9999999430 112235899999999998888999999999999999999999999753
Q ss_pred CCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 040540 586 FTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM-----HMTDAAA 652 (669)
Q Consensus 586 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp-----s~~~v~~ 652 (669)
.. .....-+.... . .. +......+.+++.+|++.||.+|+ +++++++
T Consensus 232 ~~--~~~~~~i~~~~---~--~~-------------p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 232 EP--LLIYQKILEGI---I--YF-------------PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred CH--HHHHHHHhcCC---C--CC-------------CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 21 11111111100 0 00 111234567999999999999995 7877765
No 116
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.89 E-value=2.8e-23 Score=208.86 Aligned_cols=190 Identities=22% Similarity=0.352 Sum_probs=146.9
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..+..++|+|++++++.|.. ...++||||+++|+|.+++......+++..+..++.++++|++|+|. .
T Consensus 52 ~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~----~ 126 (270)
T cd05056 52 EKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLES----K 126 (270)
T ss_pred HHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 356779999999999999999998865 55689999999999999998655568999999999999999999994 4
Q ss_pred CeeecCCCCccc--------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-CC
Q 040540 527 PIIHCEGEDSVT--------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RK 579 (669)
Q Consensus 527 ~i~h~d~~~~~~--------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~ 579 (669)
+++|+|+++... .....++..|+|||.+....++.++|||||||++||+++ |+
T Consensus 127 ~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~ 206 (270)
T cd05056 127 RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGV 206 (270)
T ss_pred CeeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCC
Confidence 799999985410 000113457999999888889999999999999999986 99
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhHH
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIKV 659 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~~ 659 (669)
.||...... ....+....... +.+..++..+.+++.+|+..+|++|||+.+++..|++++.
T Consensus 207 ~pf~~~~~~--~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 207 KPFQGVKNN--DVIGRIENGERL-----------------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred CCCCCCCHH--HHHHHHHcCCcC-----------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 998653221 122222211100 0112334568899999999999999999999999999875
Q ss_pred H
Q 040540 660 K 660 (669)
Q Consensus 660 ~ 660 (669)
.
T Consensus 268 ~ 268 (270)
T cd05056 268 E 268 (270)
T ss_pred c
Confidence 4
No 117
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.89 E-value=2.1e-23 Score=210.88 Aligned_cols=191 Identities=19% Similarity=0.332 Sum_probs=147.5
Q ss_pred ccCchhhhhhccccccccceecccccc-ccccceeeccCCCCChHHhhhcCC-------CccCHHHHHHHHHhHHhhhhh
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSN-PDFKALVLEFMPNGSLEKWLYSHN-------YFLDILERLNIMIDVGSALEY 518 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ey~~~g~L~~~l~~~~-------~~l~~~~~~~i~~~i~~~l~~ 518 (669)
..+..|...+..++|+|++++++++.. +...++++||+++|+|.+++.... ..+++..+..++.+++.|++|
T Consensus 53 ~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~ 132 (280)
T cd05043 53 TLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSY 132 (280)
T ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence 345678888999999999999998766 467789999999999999986532 458899999999999999999
Q ss_pred hhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccccchhhHHH
Q 040540 519 LRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVL 571 (669)
Q Consensus 519 lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvi 571 (669)
||. .+++|+|+++... .....++..|+|||+.....++.++|||||||+
T Consensus 133 LH~----~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~ 208 (280)
T cd05043 133 LHK----RGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVL 208 (280)
T ss_pred HHH----CCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHH
Confidence 994 4799999985310 001124567999999988889999999999999
Q ss_pred HHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 040540 572 LMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650 (669)
Q Consensus 572 l~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v 650 (669)
+||+++ |+.||... ....+..++....... .+..++..+.+++.+||..+|++|||+.+|
T Consensus 209 l~el~~~g~~p~~~~--~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 269 (280)
T cd05043 209 LWELMTLGQTPYVEI--DPFEMAAYLKDGYRLA-----------------QPINCPDELFAVMACCWALDPEERPSFSQL 269 (280)
T ss_pred HHHHhcCCCCCcCcC--CHHHHHHHHHcCCCCC-----------------CCCcCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 999999 99998653 2222333333221100 011233467899999999999999999999
Q ss_pred HHHHHHhHHH
Q 040540 651 AAKLKKIKVK 660 (669)
Q Consensus 651 ~~~l~~~~~~ 660 (669)
++.|+++..+
T Consensus 270 ~~~l~~~~~~ 279 (280)
T cd05043 270 VQCLTDFHAQ 279 (280)
T ss_pred HHHHHHHHhc
Confidence 9999998754
No 118
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.89 E-value=3.6e-23 Score=207.62 Aligned_cols=192 Identities=22% Similarity=0.268 Sum_probs=148.5
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhc---CCCccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
..+..|+..+++++|++++++++.+...+..+++|||+++|+|.+++.+ .+..+++.+...++.++++|+.|||.
T Consensus 47 ~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-- 124 (267)
T cd08224 47 QDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS-- 124 (267)
T ss_pred HHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh--
Confidence 3466788999999999999999999888889999999999999999864 23457889999999999999999994
Q ss_pred CCCCeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhC
Q 040540 524 SSAPIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 524 ~~~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg 578 (669)
.+++|+|+++.. ......|+..|+|||+..+..++.++|||||||++|||++|
T Consensus 125 --~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g 202 (267)
T cd08224 125 --KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL 202 (267)
T ss_pred --CCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHC
Confidence 489999988431 01113478889999999888899999999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIK 658 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~ 658 (669)
+.||.... ....+.......... +... .......+.+++.+||..+|++||++.+|+++++++.
T Consensus 203 ~~p~~~~~---~~~~~~~~~~~~~~~-----~~~~--------~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 203 QSPFYGDK---MNLYSLCKKIEKCDY-----PPLP--------ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CCCcccCC---ccHHHHHhhhhcCCC-----CCCC--------hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 99985422 222222211110000 0000 1133456789999999999999999999999998864
No 119
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=7e-22 Score=234.08 Aligned_cols=357 Identities=19% Similarity=0.230 Sum_probs=242.9
Q ss_pred CCEEEEEcCCCCCcc--cccccccCCCCCCEEeCCCCc------CcccCCcccCCCC-CCCEEEccCCcCCccCCccccC
Q 040540 51 QRVTALNLSDMGLGG--TIPLHFGNLSFLVSLDISENN------FHGHLPKELGQLR-RLRVMSLAYNKLSGSFPSWIGV 121 (669)
Q Consensus 51 ~~v~~L~ls~~~l~~--~~~~~~~~l~~L~~L~Ls~N~------l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~ 121 (669)
.+|+.+.+....+.. ..+..|..+.+|+.|.+..+. +...+|..|..++ +|+.|.+.+|.+. .+|..| .
T Consensus 532 ~~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~ 609 (1153)
T PLN03210 532 KKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-R 609 (1153)
T ss_pred ceeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-C
Confidence 345555544333322 223458888888888886653 2335666666654 6888888888876 667766 4
Q ss_pred CcccccccccccCccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEE
Q 040540 122 LSKLRILRLDYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLD 201 (669)
Q Consensus 122 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 201 (669)
+.+|+.|+|++|++. .+|..+..+++|+.|+++++...+.+|. ++.+++|+.|++++|.....+|..++.+++|+.|+
T Consensus 610 ~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~ 687 (1153)
T PLN03210 610 PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLD 687 (1153)
T ss_pred ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEe
Confidence 688888888888876 5677778888888888887765566664 77888888888888887778888888888888888
Q ss_pred ccCCCCCCCCCccccCCCCCcEEEcccCCCccccchhhhccCCCCCeeecccCcccccCCccccCCCCCCEEeCCCCCcc
Q 040540 202 LADNKLSGLIPPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFS 281 (669)
Q Consensus 202 l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~ 281 (669)
+++|...+.+|..+ ++++|+.|++++|...+.+|.. ..+|++|++++|.+. .+|..+ .+++|+.|++..+...
T Consensus 688 L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~----~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~ 760 (1153)
T PLN03210 688 MSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI----STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSE 760 (1153)
T ss_pred CCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc----cCCcCeeecCCCccc-cccccc-cccccccccccccchh
Confidence 88876555667655 7888888888888655555542 457888888888764 455544 4667777776653211
Q ss_pred -------ccCccccCCCCCCCEEEccCCccccCCCCCcccccccccCCCCCCCEEECcCCCCccccchhHhhhhcccccc
Q 040540 282 -------GHIPNTFGNLRHLSVLNVMMNNLTTESSSADQWSFLSSLTNCRNLSNLALASNPLGGILPQLIGNFSASLQNI 354 (669)
Q Consensus 282 -------~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~l 354 (669)
...+..+...++|+.|++++|..... .+..+.++++|+.|++++|...+.+|... .+++|
T Consensus 761 ~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~--------lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-----~L~sL 827 (1153)
T PLN03210 761 KLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVE--------LPSSIQNLHKLEHLEIENCINLETLPTGI-----NLESL 827 (1153)
T ss_pred hccccccccchhhhhccccchheeCCCCCCccc--------cChhhhCCCCCCEEECCCCCCcCeeCCCC-----Ccccc
Confidence 11122223345777777776643221 12345677788888888775544555432 35667
Q ss_pred ceEeecCcccCCCCCccccccCCCcEEecCCCcccccCchhhcCCCCCCeeeCcCCccceeCcccccCCCCCCEEECCCC
Q 040540 355 YAFELGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKLSGHIPPCLASLTSLRELHLGSN 434 (669)
Q Consensus 355 ~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~l~~N 434 (669)
+.+++++|.....+|.. ..+|+.|++++|.+. .+|..+..+++|+.|++++|+-...+|..+..+++|+.+++++|
T Consensus 828 ~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 828 ESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred CEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCC
Confidence 77777776554444432 246778888888776 46777778888888888886555567777777788888888776
Q ss_pred c
Q 040540 435 K 435 (669)
Q Consensus 435 ~ 435 (669)
.
T Consensus 904 ~ 904 (1153)
T PLN03210 904 G 904 (1153)
T ss_pred c
Confidence 4
No 120
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.89 E-value=2e-23 Score=210.94 Aligned_cols=186 Identities=18% Similarity=0.165 Sum_probs=140.4
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhc---CCCccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
+.+..|+.++..++|++++++.+.+......++||||+++|+|.+++.. ....+++.....++.|+++|++|||+
T Consensus 38 ~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-- 115 (280)
T cd05608 38 EGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ-- 115 (280)
T ss_pred HHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH--
Confidence 3455688899999999999999998888889999999999999988753 23468899999999999999999995
Q ss_pred CCCCeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhC
Q 040540 524 SSAPIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 524 ~~~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg 578 (669)
.+++|+|+++.. ......||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 116 --~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g 193 (280)
T cd05608 116 --RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAA 193 (280)
T ss_pred --CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhC
Confidence 479999998430 01122588999999999988899999999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM-----HMTDAAA 652 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp-----s~~~v~~ 652 (669)
+.||....... ............ .. ..+...+..+.+++.+|++.||++|| +++++++
T Consensus 194 ~~pf~~~~~~~-~~~~~~~~~~~~--------~~-------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 194 RGPFRARGEKV-ENKELKQRILND--------SV-------TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CCCCCCCCcch-hHHHHHHhhccc--------CC-------CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 99997532111 111111111110 00 01123345678999999999999999 5566654
No 121
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.89 E-value=2.6e-23 Score=211.92 Aligned_cols=194 Identities=20% Similarity=0.349 Sum_probs=142.6
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC-----------CccCHHHHHHHHHhHHhh
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-----------YFLDILERLNIMIDVGSA 515 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-----------~~l~~~~~~~i~~~i~~~ 515 (669)
..+..|+..+.+++|+|++++++++......++||||+++++|.+++.... ..+++..+..++.++++|
T Consensus 62 ~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~a 141 (295)
T cd05097 62 NDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASG 141 (295)
T ss_pred HHHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHH
Confidence 356779999999999999999999999999999999999999999996421 136788899999999999
Q ss_pred hhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccccchhh
Q 040540 516 LEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSY 568 (669)
Q Consensus 516 l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~ 568 (669)
++|||. .+++|+|+++... .....++..|+|||+.....++.++|||||
T Consensus 142 l~~lH~----~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSl 217 (295)
T cd05097 142 MKYLAS----LNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAF 217 (295)
T ss_pred HHHHHh----cCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHH
Confidence 999994 4799999985410 000123568999999988889999999999
Q ss_pred HHHHHHHHh--CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC
Q 040540 569 GVLLMETFT--RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH 646 (669)
Q Consensus 569 Gvil~el~t--g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps 646 (669)
||++|||++ |..||..... ......+............ .. .+...+..+.+++.+||+.+|++||+
T Consensus 218 G~~l~el~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~l~~li~~~l~~~p~~RPs 285 (295)
T cd05097 218 GVTLWEMFTLCKEQPYSLLSD--EQVIENTGEFFRNQGRQIY-LS---------QTPLCPSPVFKLMMRCWSRDIKDRPT 285 (295)
T ss_pred HHHHHHHHHcCCCCCCcccCh--HHHHHHHHHhhhhcccccc-CC---------CCCCCCHHHHHHHHHHcCCCchhCcC
Confidence 999999998 5567654221 1111111111110000000 00 01122346889999999999999999
Q ss_pred HHHHHHHHHH
Q 040540 647 MTDAAAKLKK 656 (669)
Q Consensus 647 ~~~v~~~l~~ 656 (669)
|.+|++.|++
T Consensus 286 ~~~i~~~l~~ 295 (295)
T cd05097 286 FNKIHHFLRE 295 (295)
T ss_pred HHHHHHHHhC
Confidence 9999998863
No 122
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.89 E-value=2.1e-23 Score=210.47 Aligned_cols=187 Identities=17% Similarity=0.209 Sum_probs=141.7
Q ss_pred CchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
...|.+++..++|||++++++.+..+...++||||+++|+|.+++... ...+++.....++.+++.|++|||. .+
T Consensus 40 ~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~----~~ 115 (277)
T cd05607 40 ALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHS----MD 115 (277)
T ss_pred HHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 345888999999999999999998888999999999999999888653 3358889999999999999999995 48
Q ss_pred eeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 528 IIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 528 i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
++|+|+++.. ......||..|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 116 ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~ 195 (277)
T cd05607 116 IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFK 195 (277)
T ss_pred EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCC
Confidence 9999998531 0112348899999999988889999999999999999999999986
Q ss_pred cCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 040540 584 EMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKL 654 (669)
Q Consensus 584 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l 654 (669)
..... .......+........ . ........+.+++.+|++.||++||+++|+++.+
T Consensus 196 ~~~~~-~~~~~~~~~~~~~~~~--------~------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 196 DHKEK-VAKEELKRRTLEDEVK--------F------EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred CCcch-hhHHHHHHHhhccccc--------c------ccccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 53211 1111121211111100 0 0112344578999999999999999998776433
No 123
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.89 E-value=1.3e-23 Score=216.62 Aligned_cols=180 Identities=19% Similarity=0.183 Sum_probs=140.0
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.++..++|||++++++.+......++||||+++|+|.+++... ..+++.....++.+++.||+|||. .+
T Consensus 41 ~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~----~~ 115 (323)
T cd05595 41 HTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHS----RD 115 (323)
T ss_pred HHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 4456888999999999999999998888999999999999999998753 458899999999999999999994 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|||+|+.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 116 ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf 195 (323)
T cd05595 116 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 195 (323)
T ss_pred eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCC
Confidence 9999999430 011234899999999998888999999999999999999999998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM-----HMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp-----s~~~v~~ 652 (669)
..... ..+...+. .... .+ +......+.+++.+|++.||++|| ++.++++
T Consensus 196 ~~~~~--~~~~~~~~---~~~~------~~---------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 196 YNQDH--ERLFELIL---MEEI------RF---------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCCCH--HHHHHHHh---cCCC------CC---------CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 65321 11111110 0000 00 112234578999999999999998 7777764
No 124
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.89 E-value=2e-23 Score=212.87 Aligned_cols=193 Identities=22% Similarity=0.367 Sum_probs=144.6
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC----------CccCHHHHHHHHHhHHhhh
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN----------YFLDILERLNIMIDVGSAL 516 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----------~~l~~~~~~~i~~~i~~~l 516 (669)
..+..|+.++..++|+|+++++++|......++++||+++++|.+++.+.. ..+++.....++.+++.|+
T Consensus 64 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al 143 (296)
T cd05051 64 EDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGM 143 (296)
T ss_pred HHHHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHH
Confidence 456678999999999999999999988889999999999999999997533 2588999999999999999
Q ss_pred hhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccccchhhH
Q 040540 517 EYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYG 569 (669)
Q Consensus 517 ~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G 569 (669)
+|||. .+++|+|+|+... .....++..|+|||+..+..++.++||||||
T Consensus 144 ~~LH~----~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 219 (296)
T cd05051 144 RYLES----LNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFG 219 (296)
T ss_pred HHHHH----cCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhH
Confidence 99994 4799999985410 0011245689999999888899999999999
Q ss_pred HHHHHHHh--CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 570 VLLMETFT--RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 570 vil~el~t--g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
|++|||++ |..|+.... .......+............ . +.+..++..+.+++.+|++.||++|||+
T Consensus 220 ~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~l~~li~~cl~~~p~~Rpt~ 287 (296)
T cd05051 220 VTLWEILTLCREQPYEHLT--DQQVIENAGHFFRDDGRQIY---L-------PRPPNCPKDIYELMLECWRRDEEDRPTF 287 (296)
T ss_pred HHHHHHHhcCCCCCCCCcC--hHHHHHHHHhcccccccccc---C-------CCccCCCHHHHHHHHHHhccChhcCCCH
Confidence 99999998 667775432 11122222211110000000 0 0112233568999999999999999999
Q ss_pred HHHHHHHH
Q 040540 648 TDAAAKLK 655 (669)
Q Consensus 648 ~~v~~~l~ 655 (669)
.|+++.|+
T Consensus 288 ~el~~~L~ 295 (296)
T cd05051 288 REIHLFLQ 295 (296)
T ss_pred HHHHHHhc
Confidence 99999886
No 125
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.89 E-value=2e-23 Score=209.72 Aligned_cols=189 Identities=20% Similarity=0.275 Sum_probs=136.7
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC----CccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN----YFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
.+..|...+..++|+|++++++.+......++||||+++|+|.++++... ...++.....++.|+++|++|+|.
T Consensus 41 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-- 118 (269)
T cd05087 41 KFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK-- 118 (269)
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH--
Confidence 46678899999999999999999988888999999999999999997522 245677778899999999999994
Q ss_pred CCCCeeecCCCCcc----------------c-----------ccccccccccCccccccCC-------CcCccccchhhH
Q 040540 524 SSAPIIHCEGEDSV----------------T-----------QTTTMATIGYMAPEYGSEG-------IVSAKCDVYSYG 569 (669)
Q Consensus 524 ~~~~i~h~d~~~~~----------------~-----------~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~s~G 569 (669)
.+++|+|+|+.. . .....|+..|+|||++... .++.++||||||
T Consensus 119 --~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG 196 (269)
T cd05087 119 --NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLG 196 (269)
T ss_pred --CCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHH
Confidence 479999998431 0 0012356789999987542 357899999999
Q ss_pred HHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH
Q 040540 570 VLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMT 648 (669)
Q Consensus 570 vil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~ 648 (669)
|++|||++ |+.||....... ...+...... ....++.+.. .....+.+++.+|| .+|++|||++
T Consensus 197 ~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~---------~~~~~~~~l~~~c~-~~P~~Rpt~~ 261 (269)
T cd05087 197 VTIWELFELGSQPYRHLSDEQ--VLTYTVREQQ---LKLPKPRLKL---------PLSDRWYEVMQFCW-LQPEQRPSAE 261 (269)
T ss_pred HHHHHHHhCCCCCCCCCChHH--HHHHHhhccc---CCCCCCccCC---------CCChHHHHHHHHHh-cCcccCCCHH
Confidence 99999997 999996532211 1111111111 1111111110 11234678899999 5899999999
Q ss_pred HHHHHHH
Q 040540 649 DAAAKLK 655 (669)
Q Consensus 649 ~v~~~l~ 655 (669)
||++.|+
T Consensus 262 ~l~~~l~ 268 (269)
T cd05087 262 EVHLLLS 268 (269)
T ss_pred HHHHHhc
Confidence 9998874
No 126
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.89 E-value=3.4e-23 Score=212.97 Aligned_cols=193 Identities=21% Similarity=0.383 Sum_probs=146.8
Q ss_pred cCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCC---------------CccCHHHHHHHHHh
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMID 511 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ 511 (669)
.+..|+..+..+ +|+|+++++++|......+++|||+++|+|.+++.... ..+++.+..+++.+
T Consensus 63 ~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~q 142 (314)
T cd05099 63 DLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQ 142 (314)
T ss_pred HHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHH
Confidence 456788888888 69999999999988888999999999999999996521 34788899999999
Q ss_pred HHhhhhhhhcCCCCCCeeecCCCCccc---------------c------------cccccccccCccccccCCCcCcccc
Q 040540 512 VGSALEYLRHGHSSAPIIHCEGEDSVT---------------Q------------TTTMATIGYMAPEYGSEGIVSAKCD 564 (669)
Q Consensus 512 i~~~l~~lh~~~~~~~i~h~d~~~~~~---------------~------------~~~~gt~~y~aPE~~~~~~~~~~~D 564 (669)
++.|+.|+|. .+++|+|+++... . ....++..|||||++.+..++.++|
T Consensus 143 i~~aL~~lH~----~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 218 (314)
T cd05099 143 VARGMEYLES----RRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSD 218 (314)
T ss_pred HHHHHHHHHH----CCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccch
Confidence 9999999994 4899999985410 0 0001235799999998888999999
Q ss_pred chhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCC
Q 040540 565 VYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDK 643 (669)
Q Consensus 565 v~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~ 643 (669)
||||||++|||++ |+.||..... ..+......... . ..+..+...+.+++.+||..+|++
T Consensus 219 iwslG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~---~--------------~~~~~~~~~l~~li~~cl~~~p~~ 279 (314)
T cd05099 219 VWSFGILMWEIFTLGGSPYPGIPV--EELFKLLREGHR---M--------------DKPSNCTHELYMLMRECWHAVPTQ 279 (314)
T ss_pred hhHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCC---C--------------CCCCCCCHHHHHHHHHHcCCCccc
Confidence 9999999999999 8888865321 112221111100 0 001123346789999999999999
Q ss_pred CCCHHHHHHHHHHhHHHhhh
Q 040540 644 RMHMTDAAAKLKKIKVKFLD 663 (669)
Q Consensus 644 Rps~~~v~~~l~~~~~~~~~ 663 (669)
||++.|+++.|+++...+.+
T Consensus 280 Rps~~~ll~~l~~~~~~~~~ 299 (314)
T cd05099 280 RPTFKQLVEALDKVLAAVSE 299 (314)
T ss_pred CcCHHHHHHHHHHHHHHhcC
Confidence 99999999999998776533
No 127
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.89 E-value=3.2e-23 Score=210.06 Aligned_cols=193 Identities=23% Similarity=0.399 Sum_probs=145.1
Q ss_pred ccCchhhhhhccccccccceeccccccc--cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNP--DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
..+..|+..++.++|+|++++.+++... ...++||||+++++|.+++.+....+++..+..++.+++.|++|+|.
T Consensus 51 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~--- 127 (284)
T cd05079 51 ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGS--- 127 (284)
T ss_pred HHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---
Confidence 3567789999999999999999988764 56789999999999999997655568999999999999999999994
Q ss_pred CCCeeecCCCCccc----------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHH
Q 040540 525 SAPIIHCEGEDSVT----------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 525 ~~~i~h~d~~~~~~----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~ 576 (669)
.+++|+|+++... .....|+..|+|||+..+..++.++|||||||++|||+
T Consensus 128 -~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ell 206 (284)
T cd05079 128 -RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELL 206 (284)
T ss_pred -CCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhh
Confidence 4899999984310 01123556799999988888999999999999999999
Q ss_pred hCCCCCCcCCC----------CCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC
Q 040540 577 TRKRPTDEMFT----------GEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH 646 (669)
Q Consensus 577 tg~~p~~~~~~----------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps 646 (669)
|++.|...... +......++...... .+.+.+...+..+.+++.+|++.+|++||+
T Consensus 207 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 272 (284)
T cd05079 207 TYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG--------------KRLPRPPNCPEEVYQLMRKCWEFQPSKRTT 272 (284)
T ss_pred cCCCCCccccchhhhhcccccccccHHHHHHHHHcC--------------ccCCCCCCCCHHHHHHHHHHccCCcccCcC
Confidence 98876533111 011111111110000 001112234567899999999999999999
Q ss_pred HHHHHHHHHHh
Q 040540 647 MTDAAAKLKKI 657 (669)
Q Consensus 647 ~~~v~~~l~~~ 657 (669)
+.++++.++++
T Consensus 273 ~~~il~~l~~~ 283 (284)
T cd05079 273 FQNLIEGFEAI 283 (284)
T ss_pred HHHHHHHHHhh
Confidence 99999999875
No 128
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.89 E-value=1.6e-23 Score=208.75 Aligned_cols=186 Identities=21% Similarity=0.248 Sum_probs=144.8
Q ss_pred cccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
.+.+..|+..++.++|+|++++++.+......++++||+++++|.+++...+..+++.....++.++++|+.|||..
T Consensus 42 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~--- 118 (256)
T cd06612 42 LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN--- 118 (256)
T ss_pred HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 34677889999999999999999999988899999999999999999986667789999999999999999999954
Q ss_pred CCeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCC
Q 040540 526 APIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 526 ~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
+++|+|+++.. ......|+..|+|||+..+..++.++|||||||++|||++|+.
T Consensus 119 -~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~ 197 (256)
T cd06612 119 -KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKP 197 (256)
T ss_pred -CcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCC
Confidence 78999987431 0111237889999999988889999999999999999999999
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|+........ ... + .. ...+.. ..+......+.+++.+||+.+|++|||+.||++
T Consensus 198 p~~~~~~~~~-~~~-~----~~----~~~~~~-------~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 198 PYSDIHPMRA-IFM-I----PN----KPPPTL-------SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CCCCcchhhh-hhh-h----cc----CCCCCC-------CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 9875321110 000 0 00 000000 112233456789999999999999999999975
No 129
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.89 E-value=9.2e-24 Score=218.35 Aligned_cols=179 Identities=20% Similarity=0.150 Sum_probs=138.8
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.++..++|||++++++.+...+..++||||+++|+|.+++.+. ..+++.....++.+++.||+|||. .+
T Consensus 64 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~----~~ 138 (329)
T PTZ00263 64 HVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHS----KD 138 (329)
T ss_pred HHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 4667899999999999999999999999999999999999999999854 457888888899999999999994 47
Q ss_pred eeecCCCCcc----------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcC
Q 040540 528 IIHCEGEDSV----------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 585 (669)
Q Consensus 528 i~h~d~~~~~----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 585 (669)
++|||+|+.. ......||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 139 ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 218 (329)
T PTZ00263 139 IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD 218 (329)
T ss_pred eeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC
Confidence 9999999431 011235899999999999888999999999999999999999998652
Q ss_pred CCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC-----HHHHH
Q 040540 586 FTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH-----MTDAA 651 (669)
Q Consensus 586 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps-----~~~v~ 651 (669)
. .......+... .. . .+......+.+++.+||+.||.+||+ ++|++
T Consensus 219 ~--~~~~~~~i~~~---~~------~---------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll 269 (329)
T PTZ00263 219 T--PFRIYEKILAG---RL------K---------FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVK 269 (329)
T ss_pred C--HHHHHHHHhcC---Cc------C---------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 1 11111111110 00 0 01112345689999999999999996 56665
No 130
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.89 E-value=3.9e-23 Score=206.53 Aligned_cols=186 Identities=23% Similarity=0.380 Sum_probs=142.6
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+.+..|+.++..++|+|++++++++. ....+++|||+++|+|.++++.. ...+++..+..++.+++.|+.|||+
T Consensus 46 ~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---- 120 (260)
T cd05069 46 EAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER---- 120 (260)
T ss_pred HHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh----
Confidence 34667899999999999999988775 45678999999999999999753 3457899999999999999999995
Q ss_pred CCeeecCCCCccc--------------------c------cccccccccCccccccCCCcCccccchhhHHHHHHHHh-C
Q 040540 526 APIIHCEGEDSVT--------------------Q------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-R 578 (669)
Q Consensus 526 ~~i~h~d~~~~~~--------------------~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g 578 (669)
.+++|+|+++... . ....++..|+|||+..+..++.++|||||||++|||+| |
T Consensus 121 ~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g 200 (260)
T cd05069 121 MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKG 200 (260)
T ss_pred CCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCC
Confidence 4799999984310 0 01124567999999988889999999999999999999 8
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKK 656 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~ 656 (669)
+.||..... .....+.....+. +.+.+.+..+.+++.+||+.+|++||++.+|.+.|++
T Consensus 201 ~~p~~~~~~--~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 201 RVPYPGMVN--REVLEQVERGYRM-----------------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCCCCCCH--HHHHHHHHcCCCC-----------------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 999865321 1122222221110 0112334567899999999999999999999999875
No 131
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.89 E-value=1e-23 Score=217.84 Aligned_cols=180 Identities=21% Similarity=0.207 Sum_probs=140.4
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|||++++++.+...+..++||||+++|+|.+++... ..+++.+...++.|++.|++|||. .+
T Consensus 41 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~----~~ 115 (328)
T cd05593 41 HTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHS----GK 115 (328)
T ss_pred HHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 4566888999999999999999998888999999999999999998753 458899999999999999999994 48
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
|+|||+|+.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 116 ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf 195 (328)
T cd05593 116 IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 195 (328)
T ss_pred eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCC
Confidence 9999999430 011234899999999998888999999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM-----HMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp-----s~~~v~~ 652 (669)
..... . ........... .+ +......+.+++.+|++.||++|| ++.|+++
T Consensus 196 ~~~~~--~---~~~~~~~~~~~------~~---------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 196 YNQDH--E---KLFELILMEDI------KF---------PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred CCCCH--H---HHHHHhccCCc------cC---------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 65221 1 11111100000 00 112234578999999999999997 7888875
No 132
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.89 E-value=4e-23 Score=206.44 Aligned_cols=185 Identities=24% Similarity=0.401 Sum_probs=142.4
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|+..+++++|++++++++.+. ....+++|||+++++|.+++++. ...+++.++..++.+++.|++|||..
T Consensus 47 ~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---- 121 (260)
T cd05070 47 SFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---- 121 (260)
T ss_pred HHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence 4678999999999999999998875 45678999999999999999753 34589999999999999999999954
Q ss_pred CeeecCCCCccc--------------------c------cccccccccCccccccCCCcCccccchhhHHHHHHHHh-CC
Q 040540 527 PIIHCEGEDSVT--------------------Q------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RK 579 (669)
Q Consensus 527 ~i~h~d~~~~~~--------------------~------~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~ 579 (669)
+++|+|+++... . ....++..|+|||+.....++.++||||||+++|||++ |+
T Consensus 122 ~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~ 201 (260)
T cd05070 122 NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGR 201 (260)
T ss_pred CcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCC
Confidence 799999985410 0 01123457999999888889999999999999999999 88
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHH
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKK 656 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~ 656 (669)
.||.... .....+......+. +.+.+.+..+.+++.+|+..+|++|||+.++.+.|++
T Consensus 202 ~p~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 202 VPYPGMN--NREVLEQVERGYRM-----------------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCCCC--HHHHHHHHHcCCCC-----------------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 8986532 11222222211110 0122334568899999999999999999999998875
No 133
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.89 E-value=3.2e-23 Score=210.33 Aligned_cols=198 Identities=16% Similarity=0.173 Sum_probs=140.9
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.++..++|+|++++++++......++||||++ |+|.+++...+..+++.....++.|++.||+|||. .+
T Consensus 49 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~----~~ 123 (288)
T cd07871 49 TAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHK----RK 123 (288)
T ss_pred hHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 34578999999999999999999988888899999998 59999997666668888999999999999999994 48
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
|+|||+|+.. ......||+.|+|||++.+ ..++.++||||+||++|||+||+.|
T Consensus 124 ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~p 203 (288)
T cd07871 124 ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPM 203 (288)
T ss_pred cccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCC
Confidence 9999998431 0112347889999998865 5589999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHh---CCCCccc---------cccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 582 TDEMFTGEMSLRRWVKES---LPHRLSE---------VVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~---~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
|....... .+....+.. .++.+.. ...+..... +..........++.+++.+|++.||.+|||++|
T Consensus 204 f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~ 281 (288)
T cd07871 204 FPGSTVKE-ELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQ-PLINHAPRLDTDGIDLLSSLLLYETKSRISAEA 281 (288)
T ss_pred CCCCCHHH-HHHHHHHHhCCCChHHhhccccchhhhccccCccCCC-chHHhCCCCCHHHHHHHHHhcCcCcccCCCHHH
Confidence 86532111 111111100 0000111 111110000 000001123456789999999999999999999
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
+++
T Consensus 282 ~l~ 284 (288)
T cd07871 282 ALR 284 (288)
T ss_pred Hhc
Confidence 974
No 134
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.89 E-value=3.4e-23 Score=209.24 Aligned_cols=189 Identities=17% Similarity=0.297 Sum_probs=145.8
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|...+..+.|+|++++++.|... ..++++||+++|+|.+++++....+++.....++.|+++|++|||. .+
T Consensus 55 ~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~----~~ 129 (279)
T cd05109 55 EILDEAYVMAGVGSPYVCRLLGICLTS-TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEE----VR 129 (279)
T ss_pred HHHHHHHHHHhcCCCCCceEEEEEcCC-CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 456788888899999999999988754 4679999999999999998755678999999999999999999994 47
Q ss_pred eeecCCCCccc----------------------c-----cccccccccCccccccCCCcCccccchhhHHHHHHHHh-CC
Q 040540 528 IIHCEGEDSVT----------------------Q-----TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RK 579 (669)
Q Consensus 528 i~h~d~~~~~~----------------------~-----~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~ 579 (669)
++|+|+|+... . ....++..|+|||...+..++.++|||||||++|||+| |.
T Consensus 130 iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~ 209 (279)
T cd05109 130 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGA 209 (279)
T ss_pred eeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCC
Confidence 99999985410 0 00113567999999988889999999999999999999 88
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhHH
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIKV 659 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~~ 659 (669)
.||.... ...+..++...... +.+...+..+.+++.+||+.||++||++.|++..++++..
T Consensus 210 ~p~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 210 KPYDGIP--AREIPDLLEKGERL-----------------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred CCCCCCC--HHHHHHHHHCCCcC-----------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 8986532 12233333221110 0012234567899999999999999999999999988765
Q ss_pred H
Q 040540 660 K 660 (669)
Q Consensus 660 ~ 660 (669)
+
T Consensus 271 ~ 271 (279)
T cd05109 271 D 271 (279)
T ss_pred C
Confidence 4
No 135
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.89 E-value=1.6e-23 Score=214.30 Aligned_cols=190 Identities=21% Similarity=0.350 Sum_probs=146.1
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|+|++++++.|... ..++++||+++|+|.+++......+++.....++.|+++|++|||. .+
T Consensus 55 ~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~----~~ 129 (303)
T cd05110 55 EFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE----RR 129 (303)
T ss_pred HHHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhh----cC
Confidence 456788899999999999999988754 4578999999999999998766678999999999999999999994 47
Q ss_pred eeecCCCCccc---------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-CC
Q 040540 528 IIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RK 579 (669)
Q Consensus 528 i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~ 579 (669)
++|+|+++... .....++..|+|||+..+..++.++|||||||++||+++ |+
T Consensus 130 ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~ 209 (303)
T cd05110 130 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGG 209 (303)
T ss_pred eeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCC
Confidence 99999985310 001124568999999988889999999999999999998 88
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhHH
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIKV 659 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~~ 659 (669)
.||.... .....+++...... +.+..+..++.+++.+||..+|++||+|+++++.++++..
T Consensus 210 ~p~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 210 KPYDGIP--TREIPDLLEKGERL-----------------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred CCCCCCC--HHHHHHHHHCCCCC-----------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 9986532 12223333211100 0011223467899999999999999999999999998764
Q ss_pred Hh
Q 040540 660 KF 661 (669)
Q Consensus 660 ~~ 661 (669)
..
T Consensus 271 ~~ 272 (303)
T cd05110 271 DP 272 (303)
T ss_pred ch
Confidence 43
No 136
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.89 E-value=3.8e-23 Score=210.76 Aligned_cols=194 Identities=20% Similarity=0.343 Sum_probs=143.1
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC----------CccCHHHHHHHHHhHHhhh
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN----------YFLDILERLNIMIDVGSAL 516 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----------~~l~~~~~~~i~~~i~~~l 516 (669)
..+..|+..++.++|+|++++++++......+++|||+++|+|.+++.... ..+++.+...++.++++|+
T Consensus 64 ~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al 143 (296)
T cd05095 64 NDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGM 143 (296)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHH
Confidence 356789999999999999999999998889999999999999999997532 2367788999999999999
Q ss_pred hhhhcCCCCCCeeecCCCCccc---------------c------------cccccccccCccccccCCCcCccccchhhH
Q 040540 517 EYLRHGHSSAPIIHCEGEDSVT---------------Q------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYG 569 (669)
Q Consensus 517 ~~lh~~~~~~~i~h~d~~~~~~---------------~------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G 569 (669)
+|||. .+++|+|+|+... . ....++..|+|||....+.++.++||||||
T Consensus 144 ~~lH~----~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG 219 (296)
T cd05095 144 KYLSS----LNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFG 219 (296)
T ss_pred HHHHH----CCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHH
Confidence 99995 4799999985410 0 001124679999988888899999999999
Q ss_pred HHHHHHHh--CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 570 VLLMETFT--RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 570 vil~el~t--g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
|++|||+| |..||...... .....+.............+ .+..++..+.+++.+||+.||++||+|
T Consensus 220 ~~l~el~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~li~~cl~~~p~~Rp~~ 287 (296)
T cd05095 220 VTLWEILTLCKEQPYSQLSDE--QVIENTGEFFRDQGRQVYLP----------KPALCPDSLYKLMLSCWRRNAKERPSF 287 (296)
T ss_pred HHHHHHHHhCCCCCccccChH--HHHHHHHHHHhhccccccCC----------CCCCCCHHHHHHHHHHcCCCcccCCCH
Confidence 99999998 67787643211 11111111110000000000 112234567899999999999999999
Q ss_pred HHHHHHHHH
Q 040540 648 TDAAAKLKK 656 (669)
Q Consensus 648 ~~v~~~l~~ 656 (669)
.||.+.|++
T Consensus 288 ~~i~~~l~~ 296 (296)
T cd05095 288 QEIHATLLE 296 (296)
T ss_pred HHHHHHHhC
Confidence 999998863
No 137
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.89 E-value=3.7e-23 Score=207.72 Aligned_cols=185 Identities=24% Similarity=0.316 Sum_probs=140.1
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCcc--CHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFL--DILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l--~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
+.+..|+..+..++|+|++++++++......++++||+++++|.++++.....+ ++.....++.|+++|++|||.
T Consensus 50 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--- 126 (268)
T cd06624 50 QPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD--- 126 (268)
T ss_pred HHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH---
Confidence 356678999999999999999999999899999999999999999998644445 778888899999999999994
Q ss_pred CCCeeecCCCCccc--------------------------ccccccccccCccccccCC--CcCccccchhhHHHHHHHH
Q 040540 525 SAPIIHCEGEDSVT--------------------------QTTTMATIGYMAPEYGSEG--IVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 525 ~~~i~h~d~~~~~~--------------------------~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~s~Gvil~el~ 576 (669)
.+++|+|+++... .....|+..|+|||+.... .++.++|||||||++|||+
T Consensus 127 -~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~ 205 (268)
T cd06624 127 -NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMA 205 (268)
T ss_pred -CCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHH
Confidence 4899999884310 0112378899999998654 3789999999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+|+.||....... ...+...... ..+.+ +......+.+++.+||+.+|++|||+.|++.
T Consensus 206 ~g~~p~~~~~~~~--~~~~~~~~~~------~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 206 TGKPPFIELGEPQ--AAMFKVGMFK------IHPEI---------PESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred hCCCCCccccChh--hhHhhhhhhc------cCCCC---------CcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 9999986532111 1111100000 00111 1233456789999999999999999999875
No 138
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=2.8e-23 Score=206.62 Aligned_cols=182 Identities=19% Similarity=0.278 Sum_probs=151.1
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+.+|.-++|||||++|.........|+|.|.-++|+|++||.++...+.+.-..+++.||.+|+.|+|+-
T Consensus 62 ~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---- 137 (864)
T KOG4717|consen 62 GHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---- 137 (864)
T ss_pred hHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh----
Confidence 3456799999999999999999999888889999999999999999998877788888999999999999999976
Q ss_pred CeeecCCCCc-------------------------ccccccccccccCccccccCCCcC-ccccchhhHHHHHHHHhCCC
Q 040540 527 PIIHCEGEDS-------------------------VTQTTTMATIGYMAPEYGSEGIVS-AKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 527 ~i~h~d~~~~-------------------------~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~Gvil~el~tg~~ 580 (669)
-++|||+|+. ...++.+|+..|.|||++.+..|+ +++||||+|||||-++.|+.
T Consensus 138 HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~ 217 (864)
T KOG4717|consen 138 HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQP 217 (864)
T ss_pred hhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCC
Confidence 4899999964 234556799999999999987776 57999999999999999999
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
||......+ .+..++|=. +.-+.....++.++|..|+.+||.+|-+.+||+.
T Consensus 218 PFqeANDSE-------------TLTmImDCK-------YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 218 PFQEANDSE-------------TLTMIMDCK-------YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred ccccccchh-------------hhhhhhccc-------ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 997643211 112222211 1125567788999999999999999999999975
No 139
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.89 E-value=1.8e-23 Score=208.54 Aligned_cols=186 Identities=22% Similarity=0.323 Sum_probs=144.5
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+.+..|+..+++++|+|++++++.+.. ...+++|||+++|+|.+++.+.. ..+++.....++.++++|++|||.
T Consensus 41 ~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---- 115 (257)
T cd05040 41 DDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES---- 115 (257)
T ss_pred HHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHh----
Confidence 456789999999999999999998877 77899999999999999998654 468999999999999999999994
Q ss_pred CCeeecCCCCccc----------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 526 APIIHCEGEDSVT----------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 526 ~~i~h~d~~~~~~----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
.+++|+|+++... .....++..|+|||+.....++.++|||||||++|||+|
T Consensus 116 ~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t 195 (257)
T cd05040 116 KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFT 195 (257)
T ss_pred CCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHh
Confidence 4799999985410 001235678999999988889999999999999999999
Q ss_pred -CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHH
Q 040540 578 -RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655 (669)
Q Consensus 578 -g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~ 655 (669)
|+.||...... .+....... .... +.+...+..+.+++.+|++.+|++||++.|+++.|.
T Consensus 196 ~g~~p~~~~~~~--~~~~~~~~~-~~~~---------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 196 YGEEPWAGLSGS--QILKKIDKE-GERL---------------ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCCCCCCCCCHH--HHHHHHHhc-CCcC---------------CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 99998653211 111111110 0000 001123456789999999999999999999998875
No 140
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.89 E-value=3.4e-23 Score=209.72 Aligned_cols=187 Identities=19% Similarity=0.376 Sum_probs=143.3
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC---------------CCccCHHHHHHHHHh
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH---------------NYFLDILERLNIMID 511 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~---------------~~~l~~~~~~~i~~~ 511 (669)
..+..|...+..++|+|++++++.+......++++||+++++|.+++..+ ...+++.....++.|
T Consensus 53 ~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q 132 (283)
T cd05091 53 EEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQ 132 (283)
T ss_pred HHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHH
Confidence 34667888899999999999999999888899999999999999998531 234788888999999
Q ss_pred HHhhhhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCcccc
Q 040540 512 VGSALEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCD 564 (669)
Q Consensus 512 i~~~l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~D 564 (669)
+++|++|+|. .+++|+|+|+... .....+++.|+|||.+....++.++|
T Consensus 133 l~~aL~~lH~----~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 208 (283)
T cd05091 133 IAAGMEFLSS----HHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSD 208 (283)
T ss_pred HHHHHHHHHH----cCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchh
Confidence 9999999994 4799999985410 00112467899999998888999999
Q ss_pred chhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCC
Q 040540 565 VYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDK 643 (669)
Q Consensus 565 v~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~ 643 (669)
||||||++|||+| |..||..... ....+.+...... +.+.+++..+.+++.+||+.+|++
T Consensus 209 v~slG~~l~el~~~g~~p~~~~~~--~~~~~~i~~~~~~-----------------~~~~~~~~~~~~li~~cl~~~p~~ 269 (283)
T cd05091 209 IWSYGVVLWEVFSYGLQPYCGYSN--QDVIEMIRNRQVL-----------------PCPDDCPAWVYTLMLECWNEFPSR 269 (283)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHcCCcC-----------------CCCCCCCHHHHHHHHHHhCCCccc
Confidence 9999999999998 7888765321 1122221111000 012234456789999999999999
Q ss_pred CCCHHHHHHHHHH
Q 040540 644 RMHMTDAAAKLKK 656 (669)
Q Consensus 644 Rps~~~v~~~l~~ 656 (669)
||++.+|++.|+.
T Consensus 270 RP~~~~i~~~l~~ 282 (283)
T cd05091 270 RPRFKDIHSRLRT 282 (283)
T ss_pred CCCHHHHHHHhhC
Confidence 9999999998864
No 141
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.89 E-value=4.4e-23 Score=208.99 Aligned_cols=185 Identities=20% Similarity=0.221 Sum_probs=141.4
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|+.+++.++|+|++++++.+..++..++||||+++|+|.+++... ...+++.....++.|+++|+.|||. .
T Consensus 46 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~----~ 121 (285)
T cd05605 46 MALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR----E 121 (285)
T ss_pred HHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 3556889999999999999999998888999999999999999988653 3468999999999999999999995 4
Q ss_pred CeeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 527 PIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 527 ~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+++|+|+++.. ......|+..|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 122 ~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf 201 (285)
T cd05605 122 RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPF 201 (285)
T ss_pred CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCC
Confidence 79999998430 011235789999999998888999999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM-----HMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp-----s~~~v~~ 652 (669)
...... . ....+...+..... ..+...+..+.+++.+||..||++|| +++++++
T Consensus 202 ~~~~~~-~-~~~~~~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 202 RQRKEK-V-KREEVERRVKEDQE--------------EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred CCCchh-h-HHHHHHHHhhhccc--------------ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 753211 1 11111111110000 00122345678999999999999999 7778755
No 142
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.89 E-value=2.2e-23 Score=215.08 Aligned_cols=180 Identities=21% Similarity=0.219 Sum_probs=139.0
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.+++.++|||++++++.+...+..++||||+++|+|.+++... ..+.+.....++.|+++|++|||. .+
T Consensus 46 ~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~----~~ 120 (323)
T cd05584 46 HTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLERE-GIFMEDTACFYLSEISLALEHLHQ----QG 120 (323)
T ss_pred HHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 3456889999999999999999998888999999999999999999754 456777888899999999999995 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|+|+|+.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 121 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf 200 (323)
T cd05584 121 IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPF 200 (323)
T ss_pred eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCC
Confidence 9999998430 011224899999999998888999999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM-----HMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp-----s~~~v~~ 652 (669)
..... ............ .+ +......+.+++.+|++.+|++|| ++.++++
T Consensus 201 ~~~~~-----~~~~~~~~~~~~--~~-------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 201 TAENR-----KKTIDKILKGKL--NL-------------PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CCCCH-----HHHHHHHHcCCC--CC-------------CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 65321 111111111100 00 112234578999999999999999 6777654
No 143
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.89 E-value=1.8e-23 Score=211.60 Aligned_cols=185 Identities=21% Similarity=0.273 Sum_probs=141.1
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..++.++|+|++++++.+......++||||+++++|..++.+....+++..+..++.++++|+.|||. .
T Consensus 47 ~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~----~ 122 (282)
T cd06643 47 EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHE----N 122 (282)
T ss_pred HHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 356678889999999999999999988888999999999999999887655678999999999999999999995 4
Q ss_pred CeeecCCCCccc-------------------------ccccccccccCcccccc-----CCCcCccccchhhHHHHHHHH
Q 040540 527 PIIHCEGEDSVT-------------------------QTTTMATIGYMAPEYGS-----EGIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 527 ~i~h~d~~~~~~-------------------------~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~el~ 576 (669)
+++|+|+++... .....|+..|+|||++. ...++.++|||||||++|||+
T Consensus 123 ~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~ 202 (282)
T cd06643 123 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 202 (282)
T ss_pred CeeecCCCcccEEEccCCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHc
Confidence 799999985410 11124788999999874 344778999999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+|+.||....... .+....... +. .+. .+......+.+++.+||+.+|++||++.++++
T Consensus 203 ~g~~p~~~~~~~~-~~~~~~~~~-~~--------~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 203 QIEPPHHELNPMR-VLLKIAKSE-PP--------TLA-------QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred cCCCCccccCHHH-HHHHHhhcC-CC--------CCC-------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 9999986532111 111111110 00 000 01223456789999999999999999999875
No 144
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.89 E-value=1.3e-23 Score=213.27 Aligned_cols=187 Identities=23% Similarity=0.411 Sum_probs=142.6
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC---------------------CccCHHHH
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---------------------YFLDILER 505 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------------------~~l~~~~~ 505 (669)
+.+..|+..+..+.|+|+++++++|......+++|||+++|+|.++++... ..+++.++
T Consensus 53 ~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 132 (288)
T cd05050 53 ADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQ 132 (288)
T ss_pred HHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHH
Confidence 356678999999999999999999998888999999999999999997421 24678888
Q ss_pred HHHHHhHHhhhhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCC
Q 040540 506 LNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGI 558 (669)
Q Consensus 506 ~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~ 558 (669)
..++.+++.|++|+|. .+++|+|+++... .....++..|+|||...+..
T Consensus 133 ~~~~~~i~~aL~~lH~----~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 208 (288)
T cd05050 133 LCIAKQVAAGMAYLSE----RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNR 208 (288)
T ss_pred HHHHHHHHHHHHHHHh----CCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCC
Confidence 9999999999999994 4799999884310 00112345699999998888
Q ss_pred cCccccchhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcc
Q 040540 559 VSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCC 637 (669)
Q Consensus 559 ~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~ 637 (669)
++.++|||||||++|||++ |..||...... .....+.. ... . +.+...+..+.+++.+||
T Consensus 209 ~~~~~Dv~slG~il~el~~~~~~p~~~~~~~--~~~~~~~~---~~~--------~------~~~~~~~~~l~~li~~~l 269 (288)
T cd05050 209 YTTESDVWAYGVVLWEIFSYGMQPYYGMAHE--EVIYYVRD---GNV--------L------SCPDNCPLELYNLMRLCW 269 (288)
T ss_pred CCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhc---CCC--------C------CCCCCCCHHHHHHHHHHc
Confidence 9999999999999999998 88887643211 11111111 100 0 001123456789999999
Q ss_pred cCCCCCCCCHHHHHHHHHH
Q 040540 638 MESPDKRMHMTDAAAKLKK 656 (669)
Q Consensus 638 ~~~P~~Rps~~~v~~~l~~ 656 (669)
+.+|++|||+.|+++.|++
T Consensus 270 ~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 270 SKLPSDRPSFASINRILQR 288 (288)
T ss_pred ccCcccCCCHHHHHHHhhC
Confidence 9999999999999999874
No 145
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.89 E-value=6.2e-23 Score=206.67 Aligned_cols=188 Identities=23% Similarity=0.410 Sum_probs=143.1
Q ss_pred ccCchhhhhhccccccccceeccccccccc------cceeeccCCCCChHHhhhcC-----CCccCHHHHHHHHHhHHhh
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDF------KALVLEFMPNGSLEKWLYSH-----NYFLDILERLNIMIDVGSA 515 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~lv~ey~~~g~L~~~l~~~-----~~~l~~~~~~~i~~~i~~~ 515 (669)
..+..|+..++.++|+|++++++.+..... .++++||+++|+|.+++... ...+++.....++.|++.|
T Consensus 46 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~a 125 (273)
T cd05035 46 EEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALG 125 (273)
T ss_pred HHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHH
Confidence 356778899999999999999998765443 68999999999999998542 2358888999999999999
Q ss_pred hhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccccchhh
Q 040540 516 LEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSY 568 (669)
Q Consensus 516 l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~ 568 (669)
++|+|. .+++|+|+|+... .....++..|+|||+.....++.++|||||
T Consensus 126 L~~lH~----~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~Sl 201 (273)
T cd05035 126 MEYLSN----RNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAF 201 (273)
T ss_pred HHHHHh----CCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHH
Confidence 999995 4799999995310 000123567999999988889999999999
Q ss_pred HHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 569 GVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 569 Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
||++|||++ |..||.... .....+++....... .+..++..+.+++.+||+.||++||++
T Consensus 202 G~il~el~~~g~~p~~~~~--~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~li~~~l~~~p~~Rp~~ 262 (273)
T cd05035 202 GVTMWEIATRGQTPYPGVE--NHEIYDYLRHGNRLK-----------------QPEDCLDELYDLMYSCWRADPKDRPTF 262 (273)
T ss_pred HHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCCCC-----------------CCcCCCHHHHHHHHHHcCCChhhCcCH
Confidence 999999999 888886532 112223322211110 012334568899999999999999999
Q ss_pred HHHHHHHHHh
Q 040540 648 TDAAAKLKKI 657 (669)
Q Consensus 648 ~~v~~~l~~~ 657 (669)
.|+++.|+++
T Consensus 263 ~e~~~~l~~~ 272 (273)
T cd05035 263 TKLREVLENI 272 (273)
T ss_pred HHHHHHHHhh
Confidence 9999999875
No 146
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.89 E-value=5.9e-23 Score=205.08 Aligned_cols=182 Identities=22% Similarity=0.393 Sum_probs=140.3
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+.+++.++|+|+++++++|.. ...++||||+++|+|.++++.....+++..+..++.|++.|++|||. .
T Consensus 46 ~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~----~ 120 (259)
T cd05037 46 LAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLED----K 120 (259)
T ss_pred HHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhh----C
Confidence 456678889999999999999999887 67789999999999999998755578999999999999999999994 4
Q ss_pred CeeecCCCCcccc----------------------------cccccccccCccccccCC--CcCccccchhhHHHHHHHH
Q 040540 527 PIIHCEGEDSVTQ----------------------------TTTMATIGYMAPEYGSEG--IVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 527 ~i~h~d~~~~~~~----------------------------~~~~gt~~y~aPE~~~~~--~~~~~~Dv~s~Gvil~el~ 576 (669)
+++|+|+|+.... ....++..|+|||++... .++.++|||||||++||++
T Consensus 121 ~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~ 200 (259)
T cd05037 121 KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEIC 200 (259)
T ss_pred CeecccCccceEEEecCccccCCceeEEeCCCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHH
Confidence 7999999854210 011356789999998776 6899999999999999999
Q ss_pred h-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 040540 577 T-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKL 654 (669)
Q Consensus 577 t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l 654 (669)
+ |..|+...... ....+... ... .. ......+.+++.+||..+|++||++.||++.|
T Consensus 201 ~~~~~p~~~~~~~--~~~~~~~~--~~~--------~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 201 SNGEEPLSTLSSS--EKERFYQD--QHR--------LP---------MPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred hCCCCCcccCCch--hHHHHHhc--CCC--------CC---------CCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 9 57777553211 11111110 000 00 00015678999999999999999999999876
No 147
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.89 E-value=4.2e-23 Score=205.81 Aligned_cols=188 Identities=25% Similarity=0.404 Sum_probs=146.3
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+.+..|+.++..++|+|++++++.+......++||||+++++|.++++... ..+++.....++.+++.|+.|||.
T Consensus 45 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~---- 120 (256)
T cd05039 45 QAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEE---- 120 (256)
T ss_pred HHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh----
Confidence 456778999999999999999999988888999999999999999997543 268999999999999999999994
Q ss_pred CCeeecCCCCccc----------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-CCCCC
Q 040540 526 APIIHCEGEDSVT----------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPT 582 (669)
Q Consensus 526 ~~i~h~d~~~~~~----------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~ 582 (669)
.+++|+|+++... .....++..|+|||+.....++.++||||||+++||+++ |+.||
T Consensus 121 ~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~ 200 (256)
T cd05039 121 KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200 (256)
T ss_pred CCccchhcccceEEEeCCCCEEEcccccccccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCC
Confidence 4799999995410 001123557999999988889999999999999999997 99998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
.... ...+...+....... .+...+..+.+++.+|+..+|++||+++|++++|+.+
T Consensus 201 ~~~~--~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 201 PRIP--LKDVVPHVEKGYRME-----------------APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred CCCC--HHHHHHHHhcCCCCC-----------------CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 6532 111222222111100 0112345678999999999999999999999999753
No 148
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.89 E-value=1.2e-25 Score=238.73 Aligned_cols=362 Identities=28% Similarity=0.353 Sum_probs=231.4
Q ss_pred CEEEEEcCCCCCcccccccccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCccccccccc
Q 040540 52 RVTALNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLD 131 (669)
Q Consensus 52 ~v~~L~ls~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 131 (669)
.++.|++..|.+....-+....--.|++||+++|.+. ..|..+..+.+|+.|+++.|.+. ..|.+.+++.+|++|+|.
T Consensus 22 ~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~ 99 (1081)
T KOG0618|consen 22 ALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLK 99 (1081)
T ss_pred HHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheec
Confidence 3777888888765322222333334999999999886 78888999999999999999987 678899999999999999
Q ss_pred ccCccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEE-------------------EcccCCCcccCCcccc
Q 040540 132 YNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNL-------------------GLWSCNLQGQIPTEIG 192 (669)
Q Consensus 132 ~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L-------------------~l~~n~l~~~~p~~~~ 192 (669)
+|.+. ..|..+..+++|+.|++++|.+. .+|..+..++.+..+ ++..|.+.+.++..+.
T Consensus 100 ~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~ 177 (1081)
T KOG0618|consen 100 NNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIY 177 (1081)
T ss_pred cchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchh
Confidence 99887 79999999999999999999886 566655555444444 4444455555555555
Q ss_pred CCCCCCEEEccCCCCCCCCCccccCCCCC--------------------cEEEcccCCCccccchhhhccCCCCCeeecc
Q 040540 193 SLQNLKNLDLADNKLSGLIPPTIFNISTM--------------------RILTLESNQLSGRLPSTIGHSLRNIEYLALS 252 (669)
Q Consensus 193 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L--------------------~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls 252 (669)
.+++ .|||++|.+.. ..+.++.+| +.|..++|.++...+.. .-.+|++++++
T Consensus 178 ~l~~--~ldLr~N~~~~---~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p---~p~nl~~~dis 249 (1081)
T KOG0618|consen 178 NLTH--QLDLRYNEMEV---LDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHP---VPLNLQYLDIS 249 (1081)
T ss_pred hhhe--eeecccchhhh---hhhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeecccc---ccccceeeecc
Confidence 5444 56677666651 112222233 33333333333111110 12356666666
Q ss_pred cCcccccCCccccCCCCCCEEeCCCCCccccCccccCCCCCCCEEEccCCccccCCCCCcccccccccCCCCCCCEEECc
Q 040540 253 TNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTTESSSADQWSFLSSLTNCRNLSNLALA 332 (669)
Q Consensus 253 ~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~l~ 332 (669)
+|++++ +|+++..+.+|+.++..+|+++ .+|..+...++|+.|.+..|.+...+ .....++.|++|++.
T Consensus 250 ~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~yip---------~~le~~~sL~tLdL~ 318 (1081)
T KOG0618|consen 250 HNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELEYIP---------PFLEGLKSLRTLDLQ 318 (1081)
T ss_pred hhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhhhCC---------Ccccccceeeeeeeh
Confidence 666653 3466666666666666666663 45555555666666666666555442 223457889999999
Q ss_pred CCCCccccchhHhhhhc---------------------cccccceEeecCcccCCCCCccccccCCCcEEecCCCccccc
Q 040540 333 SNPLGGILPQLIGNFSA---------------------SLQNIYAFELGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGY 391 (669)
Q Consensus 333 ~n~l~~~~~~~~~~~~~---------------------~l~~l~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~~~~~ 391 (669)
.|.+....+..+..... ....|..|.+.+|.++...-..+.....|+.|++++|++...
T Consensus 319 ~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~f 398 (1081)
T KOG0618|consen 319 SNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSF 398 (1081)
T ss_pred hccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccC
Confidence 99988654432221100 112234455566666655555566666777777777776644
Q ss_pred CchhhcCCCCCCeeeCcCCccceeCcccccCCCCCCEEECCCCcce
Q 040540 392 VPHDLCHLERLNILNLSGNKLSGHIPPCLASLTSLRELHLGSNKLS 437 (669)
Q Consensus 392 ~p~~~~~l~~L~~L~ls~n~l~~~~p~~l~~l~~L~~L~l~~N~l~ 437 (669)
....+..+..|++|++|+|++. .+|..+..+..|+.|...+|++.
T Consensus 399 pas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~ 443 (1081)
T KOG0618|consen 399 PASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL 443 (1081)
T ss_pred CHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee
Confidence 4445666777777777777776 45667777777777777777766
No 149
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.89 E-value=4.2e-23 Score=208.40 Aligned_cols=186 Identities=20% Similarity=0.374 Sum_probs=143.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC---------CccCHHHHHHHHHhHHhhhhh
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---------YFLDILERLNIMIDVGSALEY 518 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------~~l~~~~~~~i~~~i~~~l~~ 518 (669)
.+..|+..+..+.|+|++++++++......++||||+++|+|.+++.... ..+++.....++.+++.|+.|
T Consensus 55 ~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 134 (277)
T cd05032 55 EFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAY 134 (277)
T ss_pred HHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 45678888999999999999999998899999999999999999996421 236788899999999999999
Q ss_pred hhcCCCCCCeeecCCCCcc---------------------------cccccccccccCccccccCCCcCccccchhhHHH
Q 040540 519 LRHGHSSAPIIHCEGEDSV---------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVL 571 (669)
Q Consensus 519 lh~~~~~~~i~h~d~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvi 571 (669)
||. .+++|+|+++.. ......++..|+|||......++.++|||||||+
T Consensus 135 lH~----~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 210 (277)
T cd05032 135 LAA----KKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVV 210 (277)
T ss_pred HHh----CCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHH
Confidence 994 479999988431 0011235678999999988889999999999999
Q ss_pred HHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 040540 572 LMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650 (669)
Q Consensus 572 l~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v 650 (669)
+||++| |+.||.... ...+..+....... . .+...+..+.+++.+||+.+|++|||+.++
T Consensus 211 l~el~t~g~~p~~~~~--~~~~~~~~~~~~~~--------~---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l 271 (277)
T cd05032 211 LWEMATLAEQPYQGLS--NEEVLKFVIDGGHL--------D---------LPENCPDKLLELMRMCWQYNPKMRPTFLEI 271 (277)
T ss_pred HHHhhccCCCCCccCC--HHHHHHHHhcCCCC--------C---------CCCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 999999 898986432 11222222211000 0 011224567899999999999999999999
Q ss_pred HHHHHH
Q 040540 651 AAKLKK 656 (669)
Q Consensus 651 ~~~l~~ 656 (669)
++.|++
T Consensus 272 ~~~l~~ 277 (277)
T cd05032 272 VSSLKD 277 (277)
T ss_pred HHHhcC
Confidence 998863
No 150
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=1.1e-21 Score=232.24 Aligned_cols=333 Identities=21% Similarity=0.231 Sum_probs=263.3
Q ss_pred CCEEEEEcCCC------CCcccccccccCCC-CCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCc
Q 040540 51 QRVTALNLSDM------GLGGTIPLHFGNLS-FLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLS 123 (669)
Q Consensus 51 ~~v~~L~ls~~------~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 123 (669)
.+++.|.+..+ .+...+|..|..++ .|+.|++.+|.+. .+|..| ...+|+.|++++|++. .+|..+..++
T Consensus 558 ~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~ 634 (1153)
T PLN03210 558 RNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLT 634 (1153)
T ss_pred ccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCC
Confidence 35666766543 23345677777764 5999999999886 677777 5789999999999987 6788889999
Q ss_pred ccccccccccCccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEcc
Q 040540 124 KLRILRLDYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLA 203 (669)
Q Consensus 124 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 203 (669)
+|++|+|+++...+.+| .++.+++|+.|++++|.....+|..++++++|+.|++++|...+.+|..+ .+++|+.|+++
T Consensus 635 ~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Ls 712 (1153)
T PLN03210 635 GLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLS 712 (1153)
T ss_pred CCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCC
Confidence 99999999887656677 48899999999999998888999999999999999999988777888766 78999999999
Q ss_pred CCCCCCCCCccccCCCCCcEEEcccCCCccccchhhhccCCCCCeeecccCcc-------cccCCccccCCCCCCEEeCC
Q 040540 204 DNKLSGLIPPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNL-------IGKIPNSITNATKLIGLDLG 276 (669)
Q Consensus 204 ~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l-------~~~~p~~~~~l~~L~~L~ls 276 (669)
+|...+.+|.. ..+|+.|++++|.+. .+|..+ .+++|.+|++.++.. ....+..+...++|+.|+++
T Consensus 713 gc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~--~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls 786 (1153)
T PLN03210 713 GCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL--RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLS 786 (1153)
T ss_pred CCCCccccccc---cCCcCeeecCCCccc-cccccc--cccccccccccccchhhccccccccchhhhhccccchheeCC
Confidence 99876666653 468899999999986 678765 478888888876432 11122223345689999999
Q ss_pred CCCccccCccccCCCCCCCEEEccCCc-cccCCCCCcccccccccCCCCCCCEEECcCCCCccccchhHhhhhccccccc
Q 040540 277 FNSFSGHIPNTFGNLRHLSVLNVMMNN-LTTESSSADQWSFLSSLTNCRNLSNLALASNPLGGILPQLIGNFSASLQNIY 355 (669)
Q Consensus 277 ~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~l~ 355 (669)
+|...+.+|..++++++|+.|++++|. +...+ ....+++|+.|++++|.....+|.. ..++.
T Consensus 787 ~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP----------~~~~L~sL~~L~Ls~c~~L~~~p~~-------~~nL~ 849 (1153)
T PLN03210 787 DIPSLVELPSSIQNLHKLEHLEIENCINLETLP----------TGINLESLESLDLSGCSRLRTFPDI-------STNIS 849 (1153)
T ss_pred CCCCccccChhhhCCCCCCEEECCCCCCcCeeC----------CCCCccccCEEECCCCCcccccccc-------ccccC
Confidence 998888899999999999999998764 43332 1225789999999998765544432 35688
Q ss_pred eEeecCcccCCCCCccccccCCCcEEecCCCcccccCchhhcCCCCCCeeeCcCCcc
Q 040540 356 AFELGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDLCHLERLNILNLSGNKL 412 (669)
Q Consensus 356 ~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~ls~n~l 412 (669)
.|++++|.+. .+|.++..+++|+.|++.+++-...+|.....+++|+.+++++|.-
T Consensus 850 ~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~~ 905 (1153)
T PLN03210 850 DLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGA 905 (1153)
T ss_pred EeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCcc
Confidence 8999999987 5788899999999999998554445777788899999999999853
No 151
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.89 E-value=5.2e-23 Score=205.66 Aligned_cols=186 Identities=26% Similarity=0.488 Sum_probs=147.6
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC--------CCccCHHHHHHHHHhHHhhhhh
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH--------NYFLDILERLNIMIDVGSALEY 518 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~--------~~~l~~~~~~~i~~~i~~~l~~ 518 (669)
+.+..|+..+..++|++++++++++......+++|||+++++|.+++... ...+++.....++.++++|++|
T Consensus 41 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~ 120 (262)
T cd00192 41 KDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120 (262)
T ss_pred HHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 45667899999999999999999999888999999999999999999865 4678999999999999999999
Q ss_pred hhcCCCCCCeeecCCCCcc---------------------------cccccccccccCccccccCCCcCccccchhhHHH
Q 040540 519 LRHGHSSAPIIHCEGEDSV---------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVL 571 (669)
Q Consensus 519 lh~~~~~~~i~h~d~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvi 571 (669)
||. .+++|+|+++.. ......++..|+|||......++.++||||+||+
T Consensus 121 lH~----~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 196 (262)
T cd00192 121 LAS----KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVL 196 (262)
T ss_pred HHc----CCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHH
Confidence 995 579999998531 0112246788999999988889999999999999
Q ss_pred HHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 040540 572 LMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650 (669)
Q Consensus 572 l~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v 650 (669)
+|||++ |+.||.... ...+.+.+..... ...+...+.++.+++.+||..+|++||++.|+
T Consensus 197 l~~l~~~g~~p~~~~~--~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l 257 (262)
T cd00192 197 LWEIFTLGATPYPGLS--NEEVLEYLRKGYR-----------------LPKPEYCPDELYELMLSCWQLDPEDRPTFSEL 257 (262)
T ss_pred HHHHHhcCCCCCCCCC--HHHHHHHHHcCCC-----------------CCCCccCChHHHHHHHHHccCCcccCcCHHHH
Confidence 999999 599987642 2222222221100 01122334568899999999999999999999
Q ss_pred HHHHH
Q 040540 651 AAKLK 655 (669)
Q Consensus 651 ~~~l~ 655 (669)
++.|+
T Consensus 258 ~~~l~ 262 (262)
T cd00192 258 VERLE 262 (262)
T ss_pred HHhhC
Confidence 98763
No 152
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.89 E-value=8.8e-24 Score=217.41 Aligned_cols=186 Identities=20% Similarity=0.321 Sum_probs=147.2
Q ss_pred ccccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhc-CCCccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 445 AFRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS-HNYFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 445 ~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
...+|.+|...|.+++|+|++++||.... .-..+|+|.+++|+|.+-|++ ....+-......++.|||+|+.||.
T Consensus 154 ~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe--- 229 (1039)
T KOG0199|consen 154 IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE--- 229 (1039)
T ss_pred hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh---
Confidence 34589999999999999999999999876 666799999999999999997 4456777788899999999999995
Q ss_pred CCCCeeecCCCCcc------------------------cccc----cccccccCccccccCCCcCccccchhhHHHHHHH
Q 040540 524 SSAPIIHCEGEDSV------------------------TQTT----TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMET 575 (669)
Q Consensus 524 ~~~~i~h~d~~~~~------------------------~~~~----~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el 575 (669)
.++.||||+..-. .... ..--..|+|||.+..++++.++|||+|||++|||
T Consensus 230 -skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEM 308 (1039)
T KOG0199|consen 230 -SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEM 308 (1039)
T ss_pred -hhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhh
Confidence 5689999976210 0000 0013579999999999999999999999999999
Q ss_pred Hh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 040540 576 FT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKL 654 (669)
Q Consensus 576 ~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l 654 (669)
+| |..||-+... ..+.+ .+| ++.+.+.+..|+.++++++.+||..+|++|||+.++.+.+
T Consensus 309 FtyGEePW~G~~g--~qIL~------------~iD-----~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 309 FTYGEEPWVGCRG--IQILK------------NID-----AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred hccCCCCCCCCCH--HHHHH------------hcc-----ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 99 6788865321 11111 111 2344556788999999999999999999999999997543
No 153
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.89 E-value=6.6e-23 Score=210.14 Aligned_cols=199 Identities=19% Similarity=0.204 Sum_probs=143.6
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.++..++|||++++++.+..++..+++|||+++++|.++++.. ..+++.....++.++++|+.|||.. .+
T Consensus 45 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~~ 120 (308)
T cd06615 45 QIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREK---HK 120 (308)
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhh---CC
Confidence 4567899999999999999999999999999999999999999999754 4578888999999999999999942 47
Q ss_pred eeecCCCCcc-----------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCc
Q 040540 528 IIHCEGEDSV-----------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE 584 (669)
Q Consensus 528 i~h~d~~~~~-----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 584 (669)
++|+|+++.. ......|+..|+|||...+..++.++|||||||++|||+||+.||..
T Consensus 121 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~ 200 (308)
T cd06615 121 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPP 200 (308)
T ss_pred EEECCCChHHEEEecCCcEEEccCCCcccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 9999998431 01123478899999998887899999999999999999999999864
Q ss_pred CCCCCccHHHHHHHhCCCCc---------------------cccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCC
Q 040540 585 MFTGEMSLRRWVKESLPHRL---------------------SEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDK 643 (669)
Q Consensus 585 ~~~~~~~l~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~ 643 (669)
.. ......+......... .+..+.......+..+ .......+.+++.+||..+|++
T Consensus 201 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~ 277 (308)
T cd06615 201 PD--AKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLP-SGAFSDEFQDFVDKCLKKNPKE 277 (308)
T ss_pred cc--hhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCc-CcccCHHHHHHHHHHccCChhh
Confidence 22 1111111111000000 0000000000000000 0123456889999999999999
Q ss_pred CCCHHHHHHH
Q 040540 644 RMHMTDAAAK 653 (669)
Q Consensus 644 Rps~~~v~~~ 653 (669)
||++++|++.
T Consensus 278 Rpt~~~ll~~ 287 (308)
T cd06615 278 RADLKELTKH 287 (308)
T ss_pred CcCHHHHhcC
Confidence 9999999875
No 154
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.89 E-value=5.2e-23 Score=205.81 Aligned_cols=186 Identities=24% Similarity=0.401 Sum_probs=141.6
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|+..+..++|+|++++++.+. ....++||||+++|+|.+++++. +..+++..+..++.++++|++|+|. .
T Consensus 47 ~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~----~ 121 (262)
T cd05071 47 AFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER----M 121 (262)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 4677899999999999999998764 45578999999999999999753 3457899999999999999999995 4
Q ss_pred CeeecCCCCccc----------------------c----cccccccccCccccccCCCcCccccchhhHHHHHHHHh-CC
Q 040540 527 PIIHCEGEDSVT----------------------Q----TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RK 579 (669)
Q Consensus 527 ~i~h~d~~~~~~----------------------~----~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~ 579 (669)
+++|+|+++... . ....++..|+|||+..+..++.++|||||||++|||+| |+
T Consensus 122 ~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~ 201 (262)
T cd05071 122 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 201 (262)
T ss_pred CccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCC
Confidence 799999885310 0 01124567999999988889999999999999999999 78
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
.||...... .+..-.....+ .+...+.+..+.+++.+|++.+|++||++.++.+.|++.
T Consensus 202 ~p~~~~~~~--~~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 202 VPYPGMVNR--EVLDQVERGYR-----------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CCCCCCChH--HHHHHHhcCCC-----------------CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 888653211 11111000000 001223445678999999999999999999999999864
No 155
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.88 E-value=2.5e-23 Score=215.82 Aligned_cols=189 Identities=16% Similarity=0.171 Sum_probs=143.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.++..++|+|++++++.+......++||||+++|+|.+++... ..+++.....++.+++.|+.|||. .+
T Consensus 47 ~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~----~~ 121 (333)
T cd05600 47 HVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHE----LG 121 (333)
T ss_pred HHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 4567888999999999999999999999999999999999999999753 457888889999999999999995 47
Q ss_pred eeecCCCCcc----------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcC
Q 040540 528 IIHCEGEDSV----------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 585 (669)
Q Consensus 528 i~h~d~~~~~----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 585 (669)
++|+|+|+.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 122 ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 201 (333)
T cd05600 122 YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGS 201 (333)
T ss_pred ccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCC
Confidence 9999998431 112235899999999998889999999999999999999999999753
Q ss_pred CCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 586 FTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 586 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
... .....+... ..... .+.... ........+.+++.+|+..+|++||++.++++.
T Consensus 202 ~~~--~~~~~i~~~-~~~~~---~~~~~~------~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 202 TPN--ETWENLKYW-KETLQ---RPVYDD------PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CHH--HHHHHHHhc-ccccc---CCCCCc------cccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 211 111111110 00000 000000 001234567899999999999999999999863
No 156
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.88 E-value=5.4e-23 Score=210.35 Aligned_cols=199 Identities=17% Similarity=0.194 Sum_probs=139.1
Q ss_pred CchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
+..|+.+++.++|+|++++++++..+...++||||++ +++.+++......++......++.|+++|++|||. .+|
T Consensus 50 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~----~~i 124 (303)
T cd07869 50 AIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQ----RYI 124 (303)
T ss_pred HHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH----CCe
Confidence 4568899999999999999999988889999999996 68888887655668888899999999999999994 479
Q ss_pred eecCCCCcc-------------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCCCC
Q 040540 529 IHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 529 ~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+|||+|+.. ......||+.|+|||++.+ ..++.++||||+||++|||+||+.||
T Consensus 125 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf 204 (303)
T cd07869 125 LHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAF 204 (303)
T ss_pred ecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 999999430 0112347889999998765 45889999999999999999999999
Q ss_pred CcCCCCCccHHHHHHH-hCCC--Ccccc-----cccc-cc--c-hh-hhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 583 DEMFTGEMSLRRWVKE-SLPH--RLSEV-----VDTN-LV--R-EE-QAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~-~~~~--~~~~~-----~~~~-~~--~-~~-~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
.........+...... ..+. .+... ..+. .. . .. ............+.+++.+|++.||++|||+.|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~ 284 (303)
T cd07869 205 PGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQA 284 (303)
T ss_pred CCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHH
Confidence 7532211111111100 0000 00000 0000 00 0 00 000000112346789999999999999999999
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
+++
T Consensus 285 ~l~ 287 (303)
T cd07869 285 ALS 287 (303)
T ss_pred Hhc
Confidence 976
No 157
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.88 E-value=6.3e-23 Score=204.49 Aligned_cols=185 Identities=24% Similarity=0.383 Sum_probs=143.6
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..++.+.|++++++++++......+++|||+++++|.++++.....+++.....++.+++.|++|||. .+
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~----~~ 120 (256)
T cd05112 45 DFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLES----SN 120 (256)
T ss_pred HHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 46679999999999999999999988888999999999999999998655668899999999999999999995 47
Q ss_pred eeecCCCCccc--------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-CCC
Q 040540 528 IIHCEGEDSVT--------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKR 580 (669)
Q Consensus 528 i~h~d~~~~~~--------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~ 580 (669)
++|+|+++... .....++.+|+|||...+..++.++|||||||++|||++ |+.
T Consensus 121 i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~ 200 (256)
T cd05112 121 VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKT 200 (256)
T ss_pred ccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCC
Confidence 99999985410 001123468999999988889999999999999999998 899
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~ 655 (669)
||..... ..+........ ....+. ..+..+.+++.+||+.+|++||+|.||++.|+
T Consensus 201 p~~~~~~--~~~~~~~~~~~-----~~~~~~------------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 201 PYENRSN--SEVVETINAGF-----RLYKPR------------LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred CCCcCCH--HHHHHHHhCCC-----CCCCCC------------CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 9865321 11222111110 001111 12346789999999999999999999998873
No 158
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.88 E-value=1.2e-23 Score=208.23 Aligned_cols=182 Identities=26% Similarity=0.384 Sum_probs=138.5
Q ss_pred ccCchhhhhhccccccccceeccccccc--cccceeeccCCCCChHHhhhcCCCc-cCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNP--DFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~-l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
+...+|+.++++++|+|+|+++....++ +..|||+|||..|.+. |.. ...+ +...+..+|++|+..||+|||.
T Consensus 153 ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~-w~p-~d~~els~~~Ar~ylrDvv~GLEYLH~-- 228 (576)
T KOG0585|consen 153 EKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVK-WCP-PDKPELSEQQARKYLRDVVLGLEYLHY-- 228 (576)
T ss_pred HHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccc-cCC-CCcccccHHHHHHHHHHHHHHHHHHHh--
Confidence 4567899999999999999999988764 4579999999998774 332 2234 8889999999999999999993
Q ss_pred CCCCeeecCCCCcc-------------------c-----------ccccccccccCccccccCCC----cCccccchhhH
Q 040540 524 SSAPIIHCEGEDSV-------------------T-----------QTTTMATIGYMAPEYGSEGI----VSAKCDVYSYG 569 (669)
Q Consensus 524 ~~~~i~h~d~~~~~-------------------~-----------~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~s~G 569 (669)
-+|||||+|++. . ....+||+.|||||.+.++. .+.+.||||+|
T Consensus 229 --QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalG 306 (576)
T KOG0585|consen 229 --QGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALG 306 (576)
T ss_pred --cCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhh
Confidence 479999999540 0 11246999999999987622 45789999999
Q ss_pred HHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 570 VLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 570 vil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
|+||.++-|+.||.+.+. ..+ ..+++...+ -++...+....+.+++.+++.+||.+|-+..|
T Consensus 307 VTLYCllfG~~PF~~~~~--~~l-----------~~KIvn~pL-----~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ 368 (576)
T KOG0585|consen 307 VTLYCLLFGQLPFFDDFE--LEL-----------FDKIVNDPL-----EFPENPEINEDLKDLIKRLLEKDPEQRITLPD 368 (576)
T ss_pred hhHHHhhhccCCcccchH--HHH-----------HHHHhcCcc-----cCCCcccccHHHHHHHHHHhhcChhheeehhh
Confidence 999999999999965221 111 112222222 12334456778899999999999999999888
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
|..
T Consensus 369 ik~ 371 (576)
T KOG0585|consen 369 IKL 371 (576)
T ss_pred hee
Confidence 853
No 159
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.88 E-value=4.3e-23 Score=210.22 Aligned_cols=182 Identities=20% Similarity=0.222 Sum_probs=140.7
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.++..++|+|++++++.+......++||||+++++|.+++.+ ..+++.+...++.+++.|++|||. .+
T Consensus 63 ~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~ql~~aL~~LH~----~g 136 (296)
T cd06654 63 LIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHS----NQ 136 (296)
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 456788889999999999999999888889999999999999999864 347888999999999999999995 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|+|+++.. ......|++.|+|||...+..++.++|||||||++|||++|+.||
T Consensus 137 i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf 216 (296)
T cd06654 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216 (296)
T ss_pred cccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCC
Confidence 9999998430 011235788999999998888899999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
....... ....+..... +.+ ..+......+.+++.+||..+|++||++.|+++
T Consensus 217 ~~~~~~~-~~~~~~~~~~---------~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 217 LNENPLR-ALYLIATNGT---------PEL-------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CCCCHHH-hHHHHhcCCC---------CCC-------CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 6532111 1111111000 000 001223345789999999999999999999987
No 160
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.88 E-value=6.8e-23 Score=212.57 Aligned_cols=190 Identities=22% Similarity=0.398 Sum_probs=145.7
Q ss_pred ccCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCC---------------CccCHHHHHHHHH
Q 040540 447 RSFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMI 510 (669)
Q Consensus 447 ~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~ 510 (669)
+.+..|+.++.++ +|+|++++++.|......+++|||+++|+|.+++.... ..+++.++..++.
T Consensus 62 ~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 141 (334)
T cd05100 62 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAY 141 (334)
T ss_pred HHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHH
Confidence 4566789999998 79999999999998888999999999999999997421 2478889999999
Q ss_pred hHHhhhhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccc
Q 040540 511 DVGSALEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKC 563 (669)
Q Consensus 511 ~i~~~l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~ 563 (669)
|+++|++|||. .+++|+|+++... .....++..|+|||+..+..++.++
T Consensus 142 qi~~al~~LH~----~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 217 (334)
T cd05100 142 QVARGMEYLAS----QKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 217 (334)
T ss_pred HHHHHHHHHHH----CCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchh
Confidence 99999999994 4899999985410 0001134579999999888899999
Q ss_pred cchhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCC
Q 040540 564 DVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPD 642 (669)
Q Consensus 564 Dv~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~ 642 (669)
|||||||++|||++ |..||..... ..+...+...... +.+......+.+++.+||+.+|+
T Consensus 218 Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~cl~~~p~ 278 (334)
T cd05100 218 DVWSFGVLLWEIFTLGGSPYPGIPV--EELFKLLKEGHRM-----------------DKPANCTHELYMIMRECWHAVPS 278 (334)
T ss_pred hhHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHcCCCC-----------------CCCCCCCHHHHHHHHHHcccChh
Confidence 99999999999999 8888865321 1111111111000 00112234678999999999999
Q ss_pred CCCCHHHHHHHHHHhHH
Q 040540 643 KRMHMTDAAAKLKKIKV 659 (669)
Q Consensus 643 ~Rps~~~v~~~l~~~~~ 659 (669)
+||+|.|+++.|+++..
T Consensus 279 ~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 279 QRPTFKQLVEDLDRVLT 295 (334)
T ss_pred hCcCHHHHHHHHHHHhh
Confidence 99999999999998874
No 161
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.88 E-value=7.2e-23 Score=207.45 Aligned_cols=191 Identities=21% Similarity=0.255 Sum_probs=145.9
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|++++..++|+|++++++.+......++||||+++++|.+++.+. ..+++.....++.++++|+.|||+. .
T Consensus 48 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~ 123 (284)
T cd06620 48 KQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNV---H 123 (284)
T ss_pred HHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHh---c
Confidence 35667899999999999999999999989999999999999999998753 4588999999999999999999953 4
Q ss_pred CeeecCCCCcc-----------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 527 PIIHCEGEDSV-----------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 527 ~i~h~d~~~~~-----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
+++|+|+++.. ......|+..|+|||++.+..++.++|||||||++||++||+.||.
T Consensus 124 ~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~ 203 (284)
T cd06620 124 RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFA 203 (284)
T ss_pred CeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCc
Confidence 69999988431 0111257899999999888889999999999999999999999997
Q ss_pred cCCCCC------ccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 040540 584 EMFTGE------MSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKL 654 (669)
Q Consensus 584 ~~~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l 654 (669)
...... ..+..++........ +.+. ..+.+..+.+++.+|++.||++||++.||++..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--------~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 204 FSNIDDDGQDDPMGILDLLQQIVQEPP-----PRLP--------SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred ccchhhhhhhhhhHHHHHHHHHhhccC-----CCCC--------chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 533210 111222222111100 0000 112445688999999999999999999999863
No 162
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.88 E-value=2.4e-23 Score=210.53 Aligned_cols=186 Identities=22% Similarity=0.302 Sum_probs=142.0
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+..+.+++|+|++++++.+..+...++||||+++++|.+++.+....+++.....++.+++.|+.|||. .
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~----~ 122 (280)
T cd06611 47 EDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHS----H 122 (280)
T ss_pred HHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 356678999999999999999999998889999999999999999998766678999999999999999999995 4
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCcccccc-----CCCcCccccchhhHHHHHHHH
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGS-----EGIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~el~ 576 (669)
+++|+|+++.. ......|++.|+|||.+. ...++.++|||||||++|||+
T Consensus 123 ~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~ 202 (280)
T cd06611 123 KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELA 202 (280)
T ss_pred CcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHH
Confidence 79999988431 001124788999999874 344678999999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
+|+.||....... .+..+.. ..+ +.+ ..+......+.+++.+||+.+|++||++.+|++.
T Consensus 203 ~g~~p~~~~~~~~-~~~~~~~-~~~--------~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 203 QMEPPHHELNPMR-VLLKILK-SEP--------PTL-------DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred hCCCCcccCCHHH-HHHHHhc-CCC--------CCc-------CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 9999986532111 1111110 000 000 0112233457899999999999999999999763
No 163
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.88 E-value=3.4e-23 Score=208.48 Aligned_cols=188 Identities=23% Similarity=0.414 Sum_probs=140.6
Q ss_pred ccCchhhhhhccccccccceeccccccc------cccceeeccCCCCChHHhhhc-----CCCccCHHHHHHHHHhHHhh
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNP------DFKALVLEFMPNGSLEKWLYS-----HNYFLDILERLNIMIDVGSA 515 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ey~~~g~L~~~l~~-----~~~~l~~~~~~~i~~~i~~~ 515 (669)
+.+..|...+..++|+|++++++.|... ...+++|||+++|+|.+++.. ....+++.....++.|++.|
T Consensus 45 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 124 (272)
T cd05075 45 EDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG 124 (272)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHH
Confidence 4567788899999999999999877432 245789999999999998742 22357899999999999999
Q ss_pred hhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccccchhh
Q 040540 516 LEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSY 568 (669)
Q Consensus 516 l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~ 568 (669)
++|||+ .+++|+|+|+... .....+++.|+|||+.....++.++|||||
T Consensus 125 l~~lH~----~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~sl 200 (272)
T cd05075 125 MEYLSS----KSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSF 200 (272)
T ss_pred HHHHHH----CCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHH
Confidence 999995 4799999984310 001124567999999988889999999999
Q ss_pred HHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 569 GVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 569 Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
||++|||++ |+.||.... ...+...+.... .. +.+...+..+.+++.+||+.+|++|||+
T Consensus 201 G~il~el~~~g~~p~~~~~--~~~~~~~~~~~~--~~---------------~~~~~~~~~~~~li~~~l~~~p~~Rps~ 261 (272)
T cd05075 201 GVTMWEIATRGQTPYPGVE--NSEIYDYLRQGN--RL---------------KQPPDCLDGLYSLMSSCWLLNPKDRPSF 261 (272)
T ss_pred HHHHHHHHcCCCCCCCCCC--HHHHHHHHHcCC--CC---------------CCCCCCCHHHHHHHHHHcCCCcccCcCH
Confidence 999999999 788886522 111222121110 00 0011233457899999999999999999
Q ss_pred HHHHHHHHHh
Q 040540 648 TDAAAKLKKI 657 (669)
Q Consensus 648 ~~v~~~l~~~ 657 (669)
.++++.|+++
T Consensus 262 ~~l~~~l~~~ 271 (272)
T cd05075 262 ETLRCELEKA 271 (272)
T ss_pred HHHHHHHHhh
Confidence 9999999875
No 164
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.88 E-value=5.9e-23 Score=210.93 Aligned_cols=177 Identities=20% Similarity=0.208 Sum_probs=135.3
Q ss_pred chhhhhhcc-ccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 450 DSECEVLRN-VRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 450 ~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
..|...+.. .+|||++++++.+...+..++||||+++|+|.+++... ..+++.+...++.|+++|++|||. .++
T Consensus 43 ~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~----~~i 117 (316)
T cd05619 43 MVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHS----KGI 117 (316)
T ss_pred HHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh----CCe
Confidence 345556654 48999999999999888999999999999999999753 457888999999999999999994 489
Q ss_pred eecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 529 IHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 529 ~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
+|||+|+.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 118 vHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~ 197 (316)
T cd05619 118 VYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred EeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCC
Confidence 999998430 0112348999999999988889999999999999999999999996
Q ss_pred cCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH-HHH
Q 040540 584 EMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMT-DAA 651 (669)
Q Consensus 584 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~-~v~ 651 (669)
... ...+.+.+....+. . +......+.+++.+|++.||++||++. ++.
T Consensus 198 ~~~--~~~~~~~i~~~~~~-----~-------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 198 GHD--EEELFQSIRMDNPC-----Y-------------PRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred CCC--HHHHHHHHHhCCCC-----C-------------CccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 532 11122222111100 0 111234567999999999999999997 553
No 165
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.88 E-value=3.7e-23 Score=209.03 Aligned_cols=190 Identities=19% Similarity=0.332 Sum_probs=147.3
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+..+..++|+|++++++.|.. ...+++|||+++|+|.+++.+....+++.....++.|+++|++|||. .
T Consensus 54 ~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~----~ 128 (279)
T cd05057 54 KEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEE----K 128 (279)
T ss_pred HHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 356678899999999999999999876 67789999999999999998766678999999999999999999994 5
Q ss_pred CeeecCCCCccc--------------------c-------cccccccccCccccccCCCcCccccchhhHHHHHHHHh-C
Q 040540 527 PIIHCEGEDSVT--------------------Q-------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-R 578 (669)
Q Consensus 527 ~i~h~d~~~~~~--------------------~-------~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g 578 (669)
+++|+|+++... . ....++..|+|||......++.++|||||||++||++| |
T Consensus 129 ~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g 208 (279)
T cd05057 129 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFG 208 (279)
T ss_pred CEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCC
Confidence 899999985310 0 00112457999999888889999999999999999999 9
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIK 658 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~ 658 (669)
+.||..... ..+.+.+...... +.+..+...+.+++.+||..+|.+||++.++++.++++.
T Consensus 209 ~~p~~~~~~--~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05057 209 AKPYEGIPA--VEIPDLLEKGERL-----------------PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMA 269 (279)
T ss_pred CCCCCCCCH--HHHHHHHhCCCCC-----------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 999865321 1222222211100 001122345789999999999999999999999999875
Q ss_pred HH
Q 040540 659 VK 660 (669)
Q Consensus 659 ~~ 660 (669)
..
T Consensus 270 ~~ 271 (279)
T cd05057 270 RD 271 (279)
T ss_pred hC
Confidence 43
No 166
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.88 E-value=1e-22 Score=214.53 Aligned_cols=199 Identities=19% Similarity=0.218 Sum_probs=141.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.+++.++||||+++++++......++|+||+. ++|.+++... ..+++.+...|+.++++||+|||. .+
T Consensus 129 ~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~----~~ 202 (391)
T PHA03212 129 GTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHE----NR 202 (391)
T ss_pred hhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 34579999999999999999999988888999999996 7899888753 458899999999999999999995 47
Q ss_pred eeecCCCCcc--------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 528 IIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 528 i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
|+|||+|+.. ......||+.|+|||++.+..++.++|||||||++|||+||+.|
T Consensus 203 IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p 282 (391)
T PHA03212 203 IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDS 282 (391)
T ss_pred cccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 9999999530 00123589999999999888899999999999999999999988
Q ss_pred CCcCCC--C----CccHHHHHHHh--CCCCcc----cccccc----------ccchhhhhhhhHHHHHHHHHHHhhcccC
Q 040540 582 TDEMFT--G----EMSLRRWVKES--LPHRLS----EVVDTN----------LVREEQAFSAKMDCLLSIMDLALDCCME 639 (669)
Q Consensus 582 ~~~~~~--~----~~~l~~~~~~~--~~~~~~----~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~c~~~ 639 (669)
+..... + ...+...++.. .+.... ..++.. .....+........+..+.+++.+|++.
T Consensus 283 ~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~ 362 (391)
T PHA03212 283 LFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAF 362 (391)
T ss_pred cCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcC
Confidence 754211 0 11111111110 000000 000000 0000000011123455788999999999
Q ss_pred CCCCCCCHHHHHH
Q 040540 640 SPDKRMHMTDAAA 652 (669)
Q Consensus 640 ~P~~Rps~~~v~~ 652 (669)
||.+|||++|+++
T Consensus 363 dP~~Rpta~elL~ 375 (391)
T PHA03212 363 DAHHRPSAEALLD 375 (391)
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999985
No 167
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.88 E-value=8.2e-23 Score=206.23 Aligned_cols=181 Identities=17% Similarity=0.208 Sum_probs=141.9
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+..++.++|+|++++++.+......++||||+++++|.+++.. ..+++.....++.++++|+.|+|+ .
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~----~ 120 (277)
T cd06642 47 EDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHS----E 120 (277)
T ss_pred HHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhc----C
Confidence 3567789999999999999999999988899999999999999999864 457888999999999999999995 4
Q ss_pred CeeecCCCCccc-------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDSVT-------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~~~-------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+++|+|+++... .....|+..|+|||+..+..++.++|||||||++|||+||+.|
T Consensus 121 ~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p 200 (277)
T cd06642 121 RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 200 (277)
T ss_pred CeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCC
Confidence 799999885410 0112367889999999888899999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+....... ...+..... .+.+ ....+..+.+++.+||+.+|++||+|.||++
T Consensus 201 ~~~~~~~~--~~~~~~~~~--------~~~~---------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 201 NSDLHPMR--VLFLIPKNS--------PPTL---------EGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred Ccccchhh--HHhhhhcCC--------CCCC---------CcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 86532211 111111110 0111 1123456789999999999999999999998
No 168
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.88 E-value=8.3e-23 Score=213.50 Aligned_cols=181 Identities=23% Similarity=0.278 Sum_probs=133.7
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+.++..++|+|++++++++......++||||+++|+|.+.. ...+.....++.++++||+|||. .
T Consensus 117 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~----~ 187 (353)
T PLN00034 117 RQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHR----R 187 (353)
T ss_pred HHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 34667999999999999999999998888999999999999986532 24566777899999999999994 4
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCccccccC-----CCcCccccchhhHHHHHHHH
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSE-----GIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~Gvil~el~ 576 (669)
+++|+|+|... ......||..|+|||++.. ...+.++|||||||++|||+
T Consensus 188 ~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~ 267 (353)
T PLN00034 188 HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFY 267 (353)
T ss_pred CEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHH
Confidence 79999998420 0122358999999998743 23456899999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+|+.||....... ............. +. .+......+.+++.+||+.||++||++.|+++
T Consensus 268 ~g~~pf~~~~~~~--~~~~~~~~~~~~~-----~~---------~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 268 LGRFPFGVGRQGD--WASLMCAICMSQP-----PE---------APATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred hCCCCCCCCCCcc--HHHHHHHHhccCC-----CC---------CCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 9999997422111 1111111000000 00 01233456789999999999999999999986
No 169
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.88 E-value=4.4e-23 Score=205.47 Aligned_cols=183 Identities=16% Similarity=0.193 Sum_probs=141.1
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhc-CCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS-HNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|...++.++|+|++++++.+......+++|||+++|++.+++.. ....++......++.++++|+.|||. .
T Consensus 44 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~----~ 119 (255)
T cd08219 44 DSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE----K 119 (255)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhh----C
Confidence 455688889999999999999999888899999999999999999865 33457888899999999999999994 4
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+++|+|+++.. ......|+..|+|||+..+..++.++||||||+++|||++|+.|
T Consensus 120 ~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p 199 (255)
T cd08219 120 RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHP 199 (255)
T ss_pred CcccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCC
Confidence 79999988541 01123478889999999888899999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
|..... ............. .+ +......+.+++.+||+.||++||++.|++..
T Consensus 200 ~~~~~~-----~~~~~~~~~~~~~-~~-------------~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 200 FQANSW-----KNLILKVCQGSYK-PL-------------PSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCCCH-----HHHHHHHhcCCCC-CC-------------CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 865211 1111111000000 00 11233457899999999999999999999764
No 170
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.88 E-value=5.9e-23 Score=212.34 Aligned_cols=179 Identities=18% Similarity=0.195 Sum_probs=135.4
Q ss_pred Cchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 449 FDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 449 ~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
+..|..++..+ +|||++++++++......++||||+++|+|.+++... ..+++..+..++.|++.|++|||. .+
T Consensus 42 ~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~----~~ 116 (329)
T cd05588 42 VQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHE----RG 116 (329)
T ss_pred HHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 45677777777 6999999999998888999999999999999998753 468999999999999999999994 48
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|||+|+.. ......||+.|+|||++.+..++.++|||||||++|||+||+.||
T Consensus 117 ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf 196 (329)
T cd05588 117 IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 196 (329)
T ss_pred eEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCc
Confidence 9999998430 011235899999999999888999999999999999999999999
Q ss_pred CcCCCC---CccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC
Q 040540 583 DEMFTG---EMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH 646 (669)
Q Consensus 583 ~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps 646 (669)
+..... ......+........... .+......+.+++.+|++.||.+||+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~p~~~~~~~~~li~~~L~~dP~~R~~ 249 (329)
T cd05588 197 DIVGMSDNPDQNTEDYLFQVILEKQIR--------------IPRSLSVKASSVLKGFLNKDPKERLG 249 (329)
T ss_pred ccccccccccccchHHHHHHHHcCCCC--------------CCCCCCHHHHHHHHHHhccCHHHcCC
Confidence 642211 111112221111110000 01122345789999999999999997
No 171
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.88 E-value=4e-23 Score=212.68 Aligned_cols=174 Identities=22% Similarity=0.219 Sum_probs=133.9
Q ss_pred Cchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 449 FDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 449 ~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
+..|...+... +|||++++++++...+..++||||+++|+|.+++... ..+++.....++.|+++|++|||. .+
T Consensus 42 ~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~----~~ 116 (320)
T cd05590 42 TMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEITSALMFLHD----KG 116 (320)
T ss_pred HHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 44566666655 6999999999998888999999999999999999754 458889999999999999999994 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|||+|+.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 117 ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf 196 (320)
T cd05590 117 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPF 196 (320)
T ss_pred eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCC
Confidence 9999998430 011234899999999998888999999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
.... ...+...+.. ... .. +......+.+++.+|++.||++||++
T Consensus 197 ~~~~--~~~~~~~i~~---~~~---~~------------~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 197 EAEN--EDDLFEAILN---DEV---VY------------PTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCC--HHHHHHHHhc---CCC---CC------------CCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 7532 1111111111 100 00 11223457899999999999999998
No 172
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.88 E-value=2.7e-23 Score=194.04 Aligned_cols=172 Identities=21% Similarity=0.202 Sum_probs=135.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
....|..++..+.||.++++++.|.+.+..++||||.++|.|+.++++. ..++.....-++.+|+-|++|||+ ..
T Consensus 90 H~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~-~rF~e~~arFYAAeivlAleylH~----~~ 164 (355)
T KOG0616|consen 90 HTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKS-GRFSEPHARFYAAEIVLALEYLHS----LD 164 (355)
T ss_pred HHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhc-CCCCchhHHHHHHHHHHHHHHHHh----cC
Confidence 4456888999999999999999999999999999999999999999864 457888888899999999999995 47
Q ss_pred eeecCCCCcc----------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcC
Q 040540 528 IIHCEGEDSV----------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 585 (669)
Q Consensus 528 i~h~d~~~~~----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 585 (669)
|+.||+|+.. ...+.+|||.|+|||++....|+.++|+|||||++|||+.|.+||.+.
T Consensus 165 iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~ 244 (355)
T KOG0616|consen 165 IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD 244 (355)
T ss_pred eeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence 9999999641 122347999999999999999999999999999999999999999763
Q ss_pred CCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCC
Q 040540 586 FTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644 (669)
Q Consensus 586 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~R 644 (669)
.+ ..+-+- ++.-.+ ..|.....++.+++.+.++.|=.+|
T Consensus 245 ~~--~~iY~K-----------I~~~~v-------~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 245 NP--IQIYEK-----------ILEGKV-------KFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred Ch--HHHHHH-----------HHhCcc-------cCCcccCHHHHHHHHHHHhhhhHhh
Confidence 32 111110 110000 0122334456778888888887777
No 173
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.88 E-value=7.7e-23 Score=212.82 Aligned_cols=195 Identities=19% Similarity=0.154 Sum_probs=136.0
Q ss_pred cCchhhhhhccccccccceeccccccc-----cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNP-----DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHG 522 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~ 522 (669)
.+..|+.+++.++|||++++++++... ...++|||||. ++|.+++... ..+++.....++.|+++||+|||.
T Consensus 45 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~- 121 (338)
T cd07859 45 RILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKAN-DDLTPEHHQFFLYQLLRALKYIHT- 121 (338)
T ss_pred HHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHH-
Confidence 456789999999999999999887542 23689999996 6899998753 458899999999999999999995
Q ss_pred CCCCCeeecCCCCcc-----------------------c-----ccccccccccCccccccC--CCcCccccchhhHHHH
Q 040540 523 HSSAPIIHCEGEDSV-----------------------T-----QTTTMATIGYMAPEYGSE--GIVSAKCDVYSYGVLL 572 (669)
Q Consensus 523 ~~~~~i~h~d~~~~~-----------------------~-----~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gvil 572 (669)
.+++|+|+|+.. . .....||+.|+|||++.+ ..++.++|||||||++
T Consensus 122 ---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl 198 (338)
T cd07859 122 ---ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF 198 (338)
T ss_pred ---CCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHH
Confidence 479999998420 0 012358899999998865 5689999999999999
Q ss_pred HHHHhCCCCCCcCCCCCccHHHHHHHhCCCCc------------ccc---ccccccchhhhhhhhHHHHHHHHHHHhhcc
Q 040540 573 METFTRKRPTDEMFTGEMSLRRWVKESLPHRL------------SEV---VDTNLVREEQAFSAKMDCLLSIMDLALDCC 637 (669)
Q Consensus 573 ~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~ 637 (669)
|||+||+.||..... ......+........ .+. +.+..... ...........+.+++.+||
T Consensus 199 ~el~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l 274 (338)
T cd07859 199 AEVLTGKPLFPGKNV--VHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVP--FSQKFPNADPLALRLLERLL 274 (338)
T ss_pred HHHHcCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCc--hHHhcCCCChHHHHHHHHHc
Confidence 999999999865221 111111111100000 000 00000000 00000123356789999999
Q ss_pred cCCCCCCCCHHHHHH
Q 040540 638 MESPDKRMHMTDAAA 652 (669)
Q Consensus 638 ~~~P~~Rps~~~v~~ 652 (669)
+.||++||+++|+++
T Consensus 275 ~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 275 AFDPKDRPTAEEALA 289 (338)
T ss_pred CcCcccCCCHHHHhc
Confidence 999999999999986
No 174
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.88 E-value=1e-22 Score=203.67 Aligned_cols=187 Identities=22% Similarity=0.284 Sum_probs=143.3
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..++.++|+|++++++.+......+++|||+++++|.+++......+++.+...++.+++.|++|||. .
T Consensus 45 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~----~ 120 (262)
T cd06613 45 EIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHE----T 120 (262)
T ss_pred HHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 456678999999999999999999988888999999999999999998655678999999999999999999994 4
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCccccccCC---CcCccccchhhHHHHHHHHhC
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEG---IVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~s~Gvil~el~tg 578 (669)
+++|+|+++.. ......|+..|+|||..... .++.++|||||||++|||+||
T Consensus 121 ~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg 200 (262)
T cd06613 121 GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAEL 200 (262)
T ss_pred CceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhC
Confidence 79999988431 01122467889999998766 788999999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+.|+....... ..........+. +.+. .....+..+.+++.+||..+|.+||++.+|+.
T Consensus 201 ~~p~~~~~~~~-~~~~~~~~~~~~-------~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 201 QPPMFDLHPMR-ALFLISKSNFPP-------PKLK-------DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred CCCCCCCCHHH-HHHHHHhccCCC-------cccc-------chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99987532111 111111110000 0010 12234456789999999999999999999874
No 175
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.88 E-value=2e-22 Score=202.24 Aligned_cols=190 Identities=17% Similarity=0.279 Sum_probs=136.0
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC---CccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---YFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
+.+..|+..++.++|||++++++.|......++||||+++|+|.+++++.. ...++.....++.++++|++|||.
T Consensus 40 ~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-- 117 (268)
T cd05086 40 NEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK-- 117 (268)
T ss_pred HHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH--
Confidence 356778888889999999999999998888999999999999999997532 235666778899999999999995
Q ss_pred CCCCeeecCCCCccc---------------------------ccccccccccCccccccC-------CCcCccccchhhH
Q 040540 524 SSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSE-------GIVSAKCDVYSYG 569 (669)
Q Consensus 524 ~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~G 569 (669)
.+++|+|+|+... .....|+..|+|||+... ..++.++||||||
T Consensus 118 --~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG 195 (268)
T cd05086 118 --HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALG 195 (268)
T ss_pred --CCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHH
Confidence 4799999985410 011236778999998743 2357899999999
Q ss_pred HHHHHHHhC-CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH
Q 040540 570 VLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMT 648 (669)
Q Consensus 570 vil~el~tg-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~ 648 (669)
|++|||+++ ..||.... ....+....+.. .....++.+.. .....+.+++..|| .+|++||+|+
T Consensus 196 ~~l~el~~~~~~p~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~---------~~~~~~~~l~~~c~-~~P~~Rp~~~ 260 (268)
T cd05086 196 VTLWELFENAAQPYSHLS-DREVLNHVIKDQ----QVKLFKPQLEL---------PYSERWYEVLQFCW-LSPEKRATAE 260 (268)
T ss_pred HHHHHHHhCCCCCCCCCC-HHHHHHHHHhhc----ccccCCCccCC---------CCcHHHHHHHHHHh-hCcccCCCHH
Confidence 999999974 66775421 111111111111 11112222211 12345678889999 6799999999
Q ss_pred HHHHHHH
Q 040540 649 DAAAKLK 655 (669)
Q Consensus 649 ~v~~~l~ 655 (669)
+|++.|.
T Consensus 261 ~i~~~l~ 267 (268)
T cd05086 261 EVHRLLT 267 (268)
T ss_pred HHHHHhc
Confidence 9998874
No 176
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.88 E-value=1.6e-23 Score=215.80 Aligned_cols=176 Identities=19% Similarity=0.195 Sum_probs=137.2
Q ss_pred CchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
+..|+.++.+++|+|++++++.+..+...++||||+++|+|.+++.+. ..+++.....++.++++||+|||. .++
T Consensus 45 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~----~~i 119 (318)
T cd05582 45 TKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHS----LGI 119 (318)
T ss_pred HHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CCE
Confidence 456888999999999999999999888999999999999999999753 468999999999999999999994 479
Q ss_pred eecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 529 IHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 529 ~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
+|+|+++.. ......||+.|+|||+..+..++.++|||||||++|||+||+.||.
T Consensus 120 ~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 199 (318)
T cd05582 120 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQ 199 (318)
T ss_pred ecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCC
Confidence 999998420 0112358999999999988888999999999999999999999996
Q ss_pred cCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 584 EMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 584 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
.... ......+. .... .+ +......+.+++.+||+.||++||++.+
T Consensus 200 ~~~~--~~~~~~i~---~~~~--~~-------------p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 200 GKDR--KETMTMIL---KAKL--GM-------------PQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCH--HHHHHHHH---cCCC--CC-------------CCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 5321 11111111 1100 00 1122345679999999999999999655
No 177
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.88 E-value=8.2e-23 Score=210.95 Aligned_cols=167 Identities=16% Similarity=0.167 Sum_probs=128.9
Q ss_pred hhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCC
Q 040540 455 VLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGE 534 (669)
Q Consensus 455 ~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~ 534 (669)
.+..++|||++++++++......++||||+++|+|..+++. ..+++.....++.+++.|++|||. .+++|||+|
T Consensus 55 ~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~----~~ivHrdlk 128 (324)
T cd05589 55 TANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHE----NKIVYRDLK 128 (324)
T ss_pred hccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh----CCeEecCCC
Confidence 34567899999999999988999999999999999998864 458999999999999999999994 479999998
Q ss_pred Ccc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCC
Q 040540 535 DSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGE 589 (669)
Q Consensus 535 ~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~ 589 (669)
+.. ......||+.|||||++.+..++.++|||||||++|||++|+.||.....
T Consensus 129 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~-- 206 (324)
T cd05589 129 LDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE-- 206 (324)
T ss_pred HHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH--
Confidence 430 01123489999999999888899999999999999999999999865321
Q ss_pred ccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 590 MSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 590 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
......+..... . .+......+.+++.+|++.||++||++
T Consensus 207 ~~~~~~i~~~~~---------~---------~p~~~~~~~~~li~~~L~~dP~~R~~~ 246 (324)
T cd05589 207 EEVFDSIVNDEV---------R---------YPRFLSREAISIMRRLLRRNPERRLGS 246 (324)
T ss_pred HHHHHHHHhCCC---------C---------CCCCCCHHHHHHHHHHhhcCHhHcCCC
Confidence 111111111000 0 011223456789999999999999953
No 178
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.88 E-value=7.1e-23 Score=211.60 Aligned_cols=180 Identities=18% Similarity=0.198 Sum_probs=134.7
Q ss_pred Cchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 449 FDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 449 ~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
+..|...+..+ +|||++++++++......++||||+++|+|..++... ..+++.....++.+++.|++|||. .+
T Consensus 42 ~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~----~~ 116 (329)
T cd05618 42 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHE----RG 116 (329)
T ss_pred HHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 44566666655 7999999999998888999999999999999988753 458899999999999999999994 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|||+|+.. ......||+.|+|||++.+..++.++|||||||++|||+||+.||
T Consensus 117 ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf 196 (329)
T cd05618 117 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 196 (329)
T ss_pred eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCC
Confidence 9999998430 011235899999999999888999999999999999999999999
Q ss_pred CcCCCC---CccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 583 DEMFTG---EMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 583 ~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
...... ......++......... . .+......+.+++.+|++.||++||++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~i~~~~~-----~---------~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 197 DIVGSSDNPDQNTEDYLFQVILEKQI-----R---------IPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred ccCCCcCCcccccHHHHHHHHhcCCC-----C---------CCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 642211 11112222211111000 0 012233457899999999999999984
No 179
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.88 E-value=1.4e-22 Score=202.43 Aligned_cols=186 Identities=21% Similarity=0.365 Sum_probs=143.6
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
..+..|+.+++.++|+|++++.+.+.. ...+++|||+++|+|.+++.+. ....++..+..++.+++.|+.|||.
T Consensus 46 ~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---- 120 (260)
T cd05073 46 EAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---- 120 (260)
T ss_pred HHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHh----
Confidence 356678999999999999999988876 6678999999999999999753 3457888999999999999999995
Q ss_pred CCeeecCCCCccc--------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-C
Q 040540 526 APIIHCEGEDSVT--------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-R 578 (669)
Q Consensus 526 ~~i~h~d~~~~~~--------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g 578 (669)
.+++|+|+++... .....++..|+|||++....++.++|||||||++||++| |
T Consensus 121 ~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g 200 (260)
T cd05073 121 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 200 (260)
T ss_pred CCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcC
Confidence 4799999885410 001124567999999988889999999999999999999 8
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKK 656 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~ 656 (669)
+.||.... ...+..+....... +.+...+..+.+++.+|++.+|++||++.++.+.|+.
T Consensus 201 ~~p~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 201 RIPYPGMS--NPEVIRALERGYRM-----------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCCCCCCC--HHHHHHHHhCCCCC-----------------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 99986532 12223332221110 0012234567899999999999999999999999875
No 180
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.88 E-value=2.2e-23 Score=215.26 Aligned_cols=181 Identities=19% Similarity=0.172 Sum_probs=139.9
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|+|++++++.+......++||||+++|+|.+++... ..+++.....++.|+++||+|||. ..+
T Consensus 41 ~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~---~~~ 116 (325)
T cd05594 41 HTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHS---EKN 116 (325)
T ss_pred HHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh---cCC
Confidence 3456788888999999999999998888999999999999999998753 468899999999999999999994 247
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|||+|+.. ......||+.|+|||++.+..++.++|||||||++|||+||+.||
T Consensus 117 ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf 196 (325)
T cd05594 117 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 196 (325)
T ss_pred EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCC
Confidence 9999999541 001224899999999998888999999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM-----HMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp-----s~~~v~~ 652 (669)
..... ......+.. ... .+ +......+.+++.+|++.||++|+ ++.++++
T Consensus 197 ~~~~~--~~~~~~i~~---~~~------~~---------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 197 YNQDH--EKLFELILM---EEI------RF---------PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CCCCH--HHHHHHHhc---CCC------CC---------CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 65321 111111110 000 00 112234578999999999999996 8888864
No 181
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.88 E-value=9.2e-23 Score=206.69 Aligned_cols=194 Identities=23% Similarity=0.374 Sum_probs=146.8
Q ss_pred cccCchhhhhhccccccccceecccccc--ccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSN--PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
.+.+..|+..++.+.|+|++++++++.. ....+++|||+++++|.+++......+++..+..++.+++.|++|||.
T Consensus 50 ~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~-- 127 (284)
T cd05038 50 RSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGS-- 127 (284)
T ss_pred HHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHh--
Confidence 3467788999999999999999998876 557889999999999999998755568999999999999999999994
Q ss_pred CCCCeeecCCCCccc-------------------c---------cccccccccCccccccCCCcCccccchhhHHHHHHH
Q 040540 524 SSAPIIHCEGEDSVT-------------------Q---------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMET 575 (669)
Q Consensus 524 ~~~~i~h~d~~~~~~-------------------~---------~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el 575 (669)
.+++|+|+++... . ....++..|+|||......++.++||||||+++|||
T Consensus 128 --~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el 205 (284)
T cd05038 128 --QRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYEL 205 (284)
T ss_pred --CCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhhee
Confidence 4799999984310 0 001234569999999888899999999999999999
Q ss_pred HhCCCCCCcCCCCCcc----------HHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC
Q 040540 576 FTRKRPTDEMFTGEMS----------LRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM 645 (669)
Q Consensus 576 ~tg~~p~~~~~~~~~~----------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp 645 (669)
+||+.|+......... ...+.... .. ..+.+.+..+...+.+++.+||+.+|++||
T Consensus 206 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp 271 (284)
T cd05038 206 FTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL---------KE-----GERLPRPPSCPDEVYDLMKLCWEAEPQDRP 271 (284)
T ss_pred eccCCCcccccchhccccccccccccHHHHHHHH---------Hc-----CCcCCCCccCCHHHHHHHHHHhccChhhCC
Confidence 9999997653221110 11111000 00 001111223346688999999999999999
Q ss_pred CHHHHHHHHHHh
Q 040540 646 HMTDAAAKLKKI 657 (669)
Q Consensus 646 s~~~v~~~l~~~ 657 (669)
+|.||+++|+++
T Consensus 272 t~~ei~~~l~~i 283 (284)
T cd05038 272 SFADLILIVDRL 283 (284)
T ss_pred CHHHHHHHHhhc
Confidence 999999999876
No 182
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.88 E-value=5e-23 Score=207.62 Aligned_cols=187 Identities=20% Similarity=0.396 Sum_probs=143.7
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC--------CccCHHHHHHHHHhHHhhhhh
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN--------YFLDILERLNIMIDVGSALEY 518 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--------~~l~~~~~~~i~~~i~~~l~~ 518 (669)
..+..|+.++.+++|+|++++++++......++||||+++|+|.+++.... ..+++..+..++.++++|++|
T Consensus 53 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~ 132 (275)
T cd05046 53 SEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDH 132 (275)
T ss_pred HHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence 356779999999999999999999988888999999999999999997533 158999999999999999999
Q ss_pred hhcCCCCCCeeecCCCCccc--------------------------ccccccccccCccccccCCCcCccccchhhHHHH
Q 040540 519 LRHGHSSAPIIHCEGEDSVT--------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLL 572 (669)
Q Consensus 519 lh~~~~~~~i~h~d~~~~~~--------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil 572 (669)
||. .+++|+|+++... .....++..|+|||...+..++.++|||||||++
T Consensus 133 LH~----~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 208 (275)
T cd05046 133 LSN----ARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLM 208 (275)
T ss_pred hhh----cCcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHH
Confidence 994 4799999995410 0112356679999998887788999999999999
Q ss_pred HHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHH
Q 040540 573 METFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAA 651 (669)
Q Consensus 573 ~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~ 651 (669)
|||++ |..||..... ..+....... ..... .+...+..+.+++.+||+.+|++||++.|++
T Consensus 209 ~~l~~~~~~p~~~~~~--~~~~~~~~~~---~~~~~-------------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l 270 (275)
T cd05046 209 WEVFTQGELPFYGLSD--EEVLNRLQAG---KLELP-------------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELV 270 (275)
T ss_pred HHHHhCCCCCccccch--HHHHHHHHcC---CcCCC-------------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 99999 7788854221 1122211111 00000 0112234678999999999999999999999
Q ss_pred HHHH
Q 040540 652 AKLK 655 (669)
Q Consensus 652 ~~l~ 655 (669)
++|.
T Consensus 271 ~~l~ 274 (275)
T cd05046 271 SALG 274 (275)
T ss_pred HHhc
Confidence 9875
No 183
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.88 E-value=6.3e-23 Score=203.86 Aligned_cols=186 Identities=28% Similarity=0.454 Sum_probs=144.6
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+.+++.+.|+|++++++++......++||||+++++|.++++.....+++.....++.+++.|++|||. .
T Consensus 37 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~----~ 112 (251)
T cd05041 37 RKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLES----K 112 (251)
T ss_pred HHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 356678999999999999999999998889999999999999999997655568888999999999999999994 4
Q ss_pred CeeecCCCCcccc---------------------c------ccccccccCccccccCCCcCccccchhhHHHHHHHHh-C
Q 040540 527 PIIHCEGEDSVTQ---------------------T------TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-R 578 (669)
Q Consensus 527 ~i~h~d~~~~~~~---------------------~------~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g 578 (669)
+++|+|+++.... . ...++..|+|||.+.+..++.++|||||||++|||+| |
T Consensus 113 ~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~ 192 (251)
T cd05041 113 NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLG 192 (251)
T ss_pred CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhcc
Confidence 7999999854100 0 0112456999999988889999999999999999999 7
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~ 655 (669)
..||..... ......+..... .+.+...+..+.+++.+|+..+|++||++.|+++.|+
T Consensus 193 ~~p~~~~~~--~~~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 193 DTPYPGMSN--QQTRERIESGYR-----------------MPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCCCccCCH--HHHHHHHhcCCC-----------------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 888865321 112222111100 0112233456889999999999999999999999886
No 184
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.88 E-value=1.7e-22 Score=207.83 Aligned_cols=200 Identities=21% Similarity=0.227 Sum_probs=143.7
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
..+..|+..++.++|+|++++++.+...+..+++|||+++|++.+++.+. ...+++.....++.++++|++|||.
T Consensus 44 ~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~---- 119 (314)
T cd08216 44 KLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHS---- 119 (314)
T ss_pred HHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH----
Confidence 35677899999999999999999998888899999999999999999753 3457888889999999999999995
Q ss_pred CCeeecCCCCccc--------------------------------ccccccccccCccccccC--CCcCccccchhhHHH
Q 040540 526 APIIHCEGEDSVT--------------------------------QTTTMATIGYMAPEYGSE--GIVSAKCDVYSYGVL 571 (669)
Q Consensus 526 ~~i~h~d~~~~~~--------------------------------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gvi 571 (669)
.+|+|+|+++... .....++..|+|||++.. ..++.++|||||||+
T Consensus 120 ~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~i 199 (314)
T cd08216 120 KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGIT 199 (314)
T ss_pred CCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHH
Confidence 4799999884310 011235678999999866 348899999999999
Q ss_pred HHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccc----------------cccccccchhhhhhhhHHHHHHHHHHHhh
Q 040540 572 LMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSE----------------VVDTNLVREEQAFSAKMDCLLSIMDLALD 635 (669)
Q Consensus 572 l~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 635 (669)
+|||++|+.||...... ..+.+......+..+.. ..++... .............++.+++.+
T Consensus 200 l~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~ 277 (314)
T cd08216 200 ACELANGHVPFKDMPAT-QMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNR-DSVDHPYTRTFSEHFHQFVEL 277 (314)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhccCccccccCchhhhcCCcCcccccccccchh-hhhhcchhhHHHHHHHHHHHH
Confidence 99999999999753211 11111111111110000 0000000 001111223445678899999
Q ss_pred cccCCCCCCCCHHHHHH
Q 040540 636 CCMESPDKRMHMTDAAA 652 (669)
Q Consensus 636 c~~~~P~~Rps~~~v~~ 652 (669)
||+.||++|||++++++
T Consensus 278 ~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 278 CLQRDPESRPSASQLLN 294 (314)
T ss_pred HhhcCCCcCcCHHHHhc
Confidence 99999999999999987
No 185
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.88 E-value=1.6e-22 Score=203.18 Aligned_cols=189 Identities=23% Similarity=0.326 Sum_probs=135.2
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC----CccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN----YFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
.+..|+..++.++|+|++++++.|......++||||+++|+|.+++.... ...++.....++.|+++|++|||.
T Consensus 41 ~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-- 118 (269)
T cd05042 41 LFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ-- 118 (269)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh--
Confidence 45678888899999999999999998888999999999999999997632 224567778999999999999994
Q ss_pred CCCCeeecCCCCccc---------------------------ccccccccccCccccccC-------CCcCccccchhhH
Q 040540 524 SSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSE-------GIVSAKCDVYSYG 569 (669)
Q Consensus 524 ~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~G 569 (669)
.+++|+|+|+... .....++..|+|||+... ..++.++||||||
T Consensus 119 --~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG 196 (269)
T cd05042 119 --ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLG 196 (269)
T ss_pred --cCEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHH
Confidence 4799999994310 001124567999998642 3467899999999
Q ss_pred HHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH
Q 040540 570 VLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMT 648 (669)
Q Consensus 570 vil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~ 648 (669)
|++|||++ |+.||..... ...+...+.... .+...+.+ .......+.+++..|| .||++||+++
T Consensus 197 ~~l~el~~~~~~p~~~~~~-~~~~~~~~~~~~----~~~~~~~~---------~~~~~~~~~~~~~~~~-~dp~~Rpt~~ 261 (269)
T cd05042 197 VTMWELFTAADQPYPDLSD-EQVLKQVVREQD----IKLPKPQL---------DLKYSDRWYEVMQFCW-LDPETRPTAE 261 (269)
T ss_pred HHHHHHHhCCCCCCCcCCH-HHHHHHHhhccC----ccCCCCcc---------cccCCHHHHHHHHHHh-cCcccccCHH
Confidence 99999999 7788865321 111111111111 01111111 1122344567888898 5999999999
Q ss_pred HHHHHHH
Q 040540 649 DAAAKLK 655 (669)
Q Consensus 649 ~v~~~l~ 655 (669)
||++.|.
T Consensus 262 ~v~~~l~ 268 (269)
T cd05042 262 EVHELLT 268 (269)
T ss_pred HHHHHhc
Confidence 9998863
No 186
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.88 E-value=4.7e-23 Score=207.55 Aligned_cols=180 Identities=24% Similarity=0.312 Sum_probs=145.5
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+...+|+++++.++||||+.++.++......++|.||+.+ +|+.+|.. ...+++.....|+.+.+.||.||| +.
T Consensus 46 ~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~-d~~lpEe~v~~~a~~LVsaL~yLh----s~ 119 (808)
T KOG0597|consen 46 KNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQ-DGKLPEEQVRAIAYDLVSALYYLH----SN 119 (808)
T ss_pred HHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHH----hc
Confidence 4567899999999999999999999999999999999985 99999985 456999999999999999999999 45
Q ss_pred CeeecCCCCc-------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDS-------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~-------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+|+|||+|+. ...++..|||.|||||...+..|+..+|.||+|||+||+.+|++|
T Consensus 120 rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PP 199 (808)
T KOG0597|consen 120 RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPP 199 (808)
T ss_pred CcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCC
Confidence 8999999853 112233599999999999999999999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|... . +.+.++.-..+.+ ..+......+..+....+.+||.+|-+-.+++.
T Consensus 200 F~a~--s---i~~Lv~~I~~d~v---------------~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 200 FYAR--S---ITQLVKSILKDPV---------------KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred chHH--H---HHHHHHHHhcCCC---------------CCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 9652 1 2222222211110 013355667889999999999999999877654
No 187
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.88 E-value=1.8e-22 Score=201.75 Aligned_cols=186 Identities=20% Similarity=0.359 Sum_probs=142.4
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
..+..|+..++.++|+|++++++.+. ....+++|||+++|+|.+++... +..+++.++..++.+++.|++|||.
T Consensus 46 ~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~---- 120 (260)
T cd05067 46 EAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER---- 120 (260)
T ss_pred HHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhc----
Confidence 35667899999999999999998764 45678999999999999998753 3468899999999999999999994
Q ss_pred CCeeecCCCCcc--------------------c------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-C
Q 040540 526 APIIHCEGEDSV--------------------T------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-R 578 (669)
Q Consensus 526 ~~i~h~d~~~~~--------------------~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g 578 (669)
.+++|+|+++.. . .....++..|+|||+.....++.++|||||||++||+++ |
T Consensus 121 ~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g 200 (260)
T cd05067 121 KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYG 200 (260)
T ss_pred CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCC
Confidence 479999998431 0 001124567999999988888999999999999999999 9
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKK 656 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~ 656 (669)
+.||.... ...+.......... +.+...+..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 201 ~~p~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 201 RIPYPGMT--NPEVIQNLERGYRM-----------------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCCC--hHHHHHHHHcCCCC-----------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 99987532 11122222111100 0011223468899999999999999999999999875
No 188
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.88 E-value=8.3e-23 Score=207.86 Aligned_cols=185 Identities=20% Similarity=0.258 Sum_probs=140.3
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..++.++|+|++++++.+..+...++||||++++++..++.+....+++.....++.|+++|++|||. .
T Consensus 54 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~----~ 129 (292)
T cd06644 54 EDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHS----M 129 (292)
T ss_pred HHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhc----C
Confidence 456678889999999999999999988888999999999999999887655678999999999999999999994 4
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCcccccc-----CCCcCccccchhhHHHHHHHH
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGS-----EGIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~el~ 576 (669)
+++|+|+++.. ......|+..|+|||++. ...++.++|||||||++|||+
T Consensus 130 ~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~ 209 (292)
T cd06644 130 KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 209 (292)
T ss_pred CeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHh
Confidence 79999998531 001123678899999874 344688999999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+|+.|+..... . ..+........ +.. ..+.....++.+++.+||..+|++||+++|+++
T Consensus 210 ~g~~p~~~~~~----~-~~~~~~~~~~~-----~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 210 QIEPPHHELNP----M-RVLLKIAKSEP-----PTL-------SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred cCCCCCccccH----H-HHHHHHhcCCC-----ccC-------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 99999864221 1 11111110000 000 011223445789999999999999999999976
No 189
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.88 E-value=1e-22 Score=209.59 Aligned_cols=179 Identities=21% Similarity=0.180 Sum_probs=137.2
Q ss_pred Cchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 449 FDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 449 ~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
+..|..++..+ +|+|++++++.+...+..++||||+++|+|..++.+. ..+++.....++.++++|+.|||. .+
T Consensus 42 ~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~----~~ 116 (318)
T cd05570 42 TMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHE----RG 116 (318)
T ss_pred HHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 34566666666 6999999999998888999999999999999998753 468999999999999999999994 48
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|+|+++.. ......||+.|+|||++.+..++.++|||||||++|||+||+.||
T Consensus 117 ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf 196 (318)
T cd05570 117 IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPF 196 (318)
T ss_pred eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCC
Confidence 9999988430 011224899999999999888999999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH-----HHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM-----TDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~-----~~v~~ 652 (669)
.... ...+...+.. ... .. +......+.+++.+||..||++||++ .++++
T Consensus 197 ~~~~--~~~~~~~i~~---~~~------~~---------~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 197 EGDD--EDELFQSILE---DEV------RY---------PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCCC--HHHHHHHHHc---CCC------CC---------CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 6522 1111111111 000 00 11223457899999999999999999 77654
No 190
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.88 E-value=2e-22 Score=204.92 Aligned_cols=194 Identities=21% Similarity=0.252 Sum_probs=133.3
Q ss_pred hhhhhhcc---ccccccceecccccc-----ccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhc
Q 040540 451 SECEVLRN---VRHRNLIKIISSCSN-----PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 451 ~e~~~l~~---l~h~niv~l~~~~~~-----~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
.|...+.. ++|||++++++.|.. ....++||||++ ++|.+++... ...+++..+..++.|++.||+|||.
T Consensus 50 ~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~ 128 (290)
T cd07862 50 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 128 (290)
T ss_pred HHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45555444 479999999998742 345789999997 6999998753 2357889999999999999999995
Q ss_pred CCCCCCeeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 522 GHSSAPIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
.+++|+|+|+.. ......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 129 ----~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 204 (290)
T cd07862 129 ----HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR 204 (290)
T ss_pred ----CCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHc
Confidence 479999999531 0112347899999999988889999999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHh-C--CCCccc-------cccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKES-L--PHRLSE-------VVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~-~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
|+.||..... ...+...+... . +..+.. ...+..... ......+....+.+++.+|++.||++|||+
T Consensus 205 g~~~f~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~s~ 281 (290)
T cd07862 205 RKPLFRGSSD-VDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQP--IEKFVTDIDELGKDLLLKCLTFNPAKRISA 281 (290)
T ss_pred CCCCcCCCCH-HHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCC--HHHHccCCCHHHHHHHHHHhccCchhcCCH
Confidence 9999875321 11111111110 0 001100 000000000 000011234567899999999999999999
Q ss_pred HHHHH
Q 040540 648 TDAAA 652 (669)
Q Consensus 648 ~~v~~ 652 (669)
.|+++
T Consensus 282 ~~~l~ 286 (290)
T cd07862 282 YSALS 286 (290)
T ss_pred HHHhc
Confidence 99974
No 191
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.88 E-value=1.4e-22 Score=205.71 Aligned_cols=188 Identities=19% Similarity=0.350 Sum_probs=141.8
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC---------CccCHHHHHHHHHhHHhhhhh
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---------YFLDILERLNIMIDVGSALEY 518 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------~~l~~~~~~~i~~~i~~~l~~ 518 (669)
.+..|...++.++|+|++++++.+......++||||+++|+|.++++... ....+.....++.+++.|+.|
T Consensus 55 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 134 (288)
T cd05061 55 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 134 (288)
T ss_pred HHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 35568888999999999999999988888999999999999999997421 234566778899999999999
Q ss_pred hhcCCCCCCeeecCCCCccc--------------c-------------cccccccccCccccccCCCcCccccchhhHHH
Q 040540 519 LRHGHSSAPIIHCEGEDSVT--------------Q-------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVL 571 (669)
Q Consensus 519 lh~~~~~~~i~h~d~~~~~~--------------~-------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvi 571 (669)
||. ++++|+|+|+... . ....++..|+|||...+..++.++|||||||+
T Consensus 135 lH~----~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~ 210 (288)
T cd05061 135 LNA----KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 210 (288)
T ss_pred HHh----CCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHH
Confidence 994 5799999985410 0 00123567999999988889999999999999
Q ss_pred HHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 040540 572 LMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650 (669)
Q Consensus 572 l~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v 650 (669)
+|||++ |..||..... ......+.. .... . .+......+.+++.+|++.+|++|||+.++
T Consensus 211 l~el~~~~~~p~~~~~~--~~~~~~~~~---~~~~-----~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l 271 (288)
T cd05061 211 LWEITSLAEQPYQGLSN--EQVLKFVMD---GGYL-----D---------QPDNCPERVTDLMRMCWQFNPKMRPTFLEI 271 (288)
T ss_pred HHHHHhCCCCCCCCCCH--HHHHHHHHc---CCCC-----C---------CCCCCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 999999 7888865321 112111111 0000 0 011223568899999999999999999999
Q ss_pred HHHHHHhH
Q 040540 651 AAKLKKIK 658 (669)
Q Consensus 651 ~~~l~~~~ 658 (669)
++.+++..
T Consensus 272 l~~l~~~~ 279 (288)
T cd05061 272 VNLLKDDL 279 (288)
T ss_pred HHHHHhhc
Confidence 99988753
No 192
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.88 E-value=6.7e-23 Score=205.68 Aligned_cols=186 Identities=17% Similarity=0.210 Sum_probs=138.8
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|+|++++++.+......++|+||+++++|.++++.. ..+++.....++.|+++|++|||+ .+
T Consensus 52 ~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~----~~ 126 (267)
T cd06646 52 LIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHS----KG 126 (267)
T ss_pred HHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 3556888999999999999999998888899999999999999999753 468899999999999999999995 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCcccccc---CCCcCccccchhhHHHHHHHHhCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGS---EGIVSAKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~ 579 (669)
++|+|+++.. ......|+..|+|||.+. ...++.++|||||||++|||++|+
T Consensus 127 i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~ 206 (267)
T cd06646 127 KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQ 206 (267)
T ss_pred ccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCC
Confidence 9999988430 011234788999999874 344788999999999999999999
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
.|+........ ...+.... ...+... .....+..+.+++.+||..+|++||+++++++-
T Consensus 207 ~p~~~~~~~~~-~~~~~~~~-------~~~~~~~-------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 207 PPMFDLHPMRA-LFLMSKSN-------FQPPKLK-------DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred CCccccchhhh-heeeecCC-------CCCCCCc-------cccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 99864321110 00000000 0001110 011234567899999999999999999999763
No 193
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.87 E-value=1.1e-22 Score=202.84 Aligned_cols=184 Identities=20% Similarity=0.235 Sum_probs=143.8
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+.+..|+.++++++|+|++++++++......+++|||+++|+|.+++... ...+++.....++.++++|+.|||.
T Consensus 44 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---- 119 (256)
T cd08221 44 RDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK---- 119 (256)
T ss_pred HHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh----
Confidence 34667899999999999999999999888999999999999999999764 3468899999999999999999995
Q ss_pred CCeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCC
Q 040540 526 APIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 526 ~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
.+++|+|+++.. ......|++.|+|||+..+..++.++||||||+++|||++|+.
T Consensus 120 ~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~ 199 (256)
T cd08221 120 AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKR 199 (256)
T ss_pred CCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCC
Confidence 379999988531 0112347899999999988888999999999999999999999
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
||.... ..+.+.......... ........+.+++.+||..+|++||++.|+++.
T Consensus 200 ~~~~~~-----~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 200 TFDATN-----PLNLVVKIVQGNYTP--------------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred CCCCCC-----HHHHHHHHHcCCCCC--------------CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 986421 111111111111100 012234567899999999999999999999864
No 194
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.87 E-value=1.2e-22 Score=224.03 Aligned_cols=191 Identities=24% Similarity=0.436 Sum_probs=151.3
Q ss_pred cccCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCC---------------CccCHHHHHHHH
Q 040540 446 FRSFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIM 509 (669)
Q Consensus 446 ~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~---------------~~l~~~~~~~i~ 509 (669)
.+.+..|+.+|..+ +|+|++.++|+|......++|+||+..|+|.++++..+ ..+...+.+.++
T Consensus 345 ~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa 424 (609)
T KOG0200|consen 345 KKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFA 424 (609)
T ss_pred HHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHH
Confidence 35677889998887 59999999999999888999999999999999998765 348888999999
Q ss_pred HhHHhhhhhhhcCCCCCCeeecCCCCc-----------------------cc-c--cccccc--cccCccccccCCCcCc
Q 040540 510 IDVGSALEYLRHGHSSAPIIHCEGEDS-----------------------VT-Q--TTTMAT--IGYMAPEYGSEGIVSA 561 (669)
Q Consensus 510 ~~i~~~l~~lh~~~~~~~i~h~d~~~~-----------------------~~-~--~~~~gt--~~y~aPE~~~~~~~~~ 561 (669)
.|||+|++||+ +.+++|||+..- .. . ....|+ ..|||||.+....|+.
T Consensus 425 ~QIa~GMe~L~----~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~ 500 (609)
T KOG0200|consen 425 YQIANGMEYLA----SVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTS 500 (609)
T ss_pred HHHHHHHHHHh----hCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccc
Confidence 99999999997 457999997621 00 0 111122 3599999999999999
Q ss_pred cccchhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCC
Q 040540 562 KCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMES 640 (669)
Q Consensus 562 ~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~ 640 (669)
|+|||||||+|||++| |..||.+... ...+.++++.+ .|...|..+..++.++|..||+.+
T Consensus 501 kSDVWSfGI~L~EifsLG~~PYp~~~~-~~~l~~~l~~G-----------------~r~~~P~~c~~eiY~iM~~CW~~~ 562 (609)
T KOG0200|consen 501 KSDVWSFGILLWEIFTLGGTPYPGIPP-TEELLEFLKEG-----------------NRMEQPEHCSDEIYDLMKSCWNAD 562 (609)
T ss_pred cchhhHHHHHHHHHhhCCCCCCCCCCc-HHHHHHHHhcC-----------------CCCCCCCCCCHHHHHHHHHHhCCC
Confidence 9999999999999999 7889876321 11223333332 233345667788899999999999
Q ss_pred CCCCCCHHHHHHHHHHhH
Q 040540 641 PDKRMHMTDAAAKLKKIK 658 (669)
Q Consensus 641 P~~Rps~~~v~~~l~~~~ 658 (669)
|++||++.++++.++...
T Consensus 563 p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 563 PEDRPTFSECVEFFEKHL 580 (609)
T ss_pred cccCCCHHHHHHHHHHHH
Confidence 999999999999999853
No 195
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.87 E-value=1.6e-22 Score=186.04 Aligned_cols=198 Identities=22% Similarity=0.234 Sum_probs=144.9
Q ss_pred CchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
-.+|+..++.++|+||+.+++.+...+...+|+|||+ .+|...++++...+.-.+..+++.++.+|++|+| .+.|
T Consensus 48 alREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H----~~~I 122 (318)
T KOG0659|consen 48 ALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCH----SKWI 122 (318)
T ss_pred HHHHHHHHHHccCcchhhhhhhccCCCceEEEEEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHH----hhhh
Confidence 3479999999999999999999999999999999998 6999999998889999999999999999999999 4589
Q ss_pred eecCCCCcc-------------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCCCC
Q 040540 529 IHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 529 ~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+|||+|+.. ..+..+-|..|.|||.+.+ ++|+..+|+||.|||+.||+-|.+-|
T Consensus 123 lHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~f 202 (318)
T KOG0659|consen 123 LHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFF 202 (318)
T ss_pred hcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCC
Confidence 999999641 1222356889999998877 55999999999999999999987544
Q ss_pred CcCCCCCccHHHHHHHhC----CCCccc---cccccccc---hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESL----PHRLSE---VVDTNLVR---EEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~----~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
.+ ..+..++ ..+-+.+ ++.+.+ .-|..... ..........+..++.+++.+++..||.+|.|+.|+++
T Consensus 203 pG-~sDidQL-~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~ 280 (318)
T KOG0659|consen 203 PG-DSDIDQL-SKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK 280 (318)
T ss_pred CC-CchHHHH-HHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence 33 1222222 1111111 111111 10100000 00000011234556789999999999999999999986
Q ss_pred H
Q 040540 653 K 653 (669)
Q Consensus 653 ~ 653 (669)
+
T Consensus 281 ~ 281 (318)
T KOG0659|consen 281 H 281 (318)
T ss_pred c
Confidence 4
No 196
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.87 E-value=1.5e-22 Score=205.78 Aligned_cols=184 Identities=18% Similarity=0.264 Sum_probs=141.4
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..++.++|+|++++++.+...+..++||||+++++|.+++.. ..+++.+...++.++++|++|||. .
T Consensus 64 ~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~----~ 137 (292)
T cd06658 64 ELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHN----Q 137 (292)
T ss_pred HHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 3466788899999999999999999988999999999999999999864 347888999999999999999994 4
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+++|+|+++.. ......|+..|+|||+..+..++.++|||||||++|||++|+.|
T Consensus 138 ~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p 217 (292)
T cd06658 138 GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 217 (292)
T ss_pred CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 79999998431 01123478899999999888899999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
|.... .......+....+. .+.. .......+.+++.+||..||++|||++|+++.
T Consensus 218 ~~~~~--~~~~~~~~~~~~~~--------~~~~-------~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 218 YFNEP--PLQAMRRIRDNLPP--------RVKD-------SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CCCCC--HHHHHHHHHhcCCC--------cccc-------ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 86421 11111111111111 1110 11223457789999999999999999999863
No 197
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.87 E-value=1.8e-22 Score=213.72 Aligned_cols=199 Identities=19% Similarity=0.180 Sum_probs=141.2
Q ss_pred CchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
..+|+.++..++|+|++++++.+......+++|||+. +++.+++. ....+++..+..|+.|++.||.|||. .+|
T Consensus 133 ~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH~----~gi 206 (392)
T PHA03207 133 PGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVD-RSGPLPLEQAITIQRRLLEALAYLHG----RGI 206 (392)
T ss_pred HHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHH----CCc
Confidence 3578999999999999999999988888999999996 68999985 34568999999999999999999995 479
Q ss_pred eecCCCCcc---------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 529 IHCEGEDSV---------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 529 ~h~d~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+|||+|+.. ......||+.|+|||++....++.++|||||||++|||++|+.|
T Consensus 207 vHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~p 286 (392)
T PHA03207 207 IHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVT 286 (392)
T ss_pred cccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999998430 00123589999999999988899999999999999999999999
Q ss_pred CCcCCCCC--ccHHHHHHHhC--CCCccccccccc----------cchhhhhh---hhHHHHHHHHHHHhhcccCCCCCC
Q 040540 582 TDEMFTGE--MSLRRWVKESL--PHRLSEVVDTNL----------VREEQAFS---AKMDCLLSIMDLALDCCMESPDKR 644 (669)
Q Consensus 582 ~~~~~~~~--~~l~~~~~~~~--~~~~~~~~~~~~----------~~~~~~~~---~~~~~~~~~~~l~~~c~~~~P~~R 644 (669)
|....... ..+...++..- +.....-....+ .......+ .......++.+++.+|+..||++|
T Consensus 287 f~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R 366 (392)
T PHA03207 287 LFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFR 366 (392)
T ss_pred CCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhC
Confidence 86532211 11111111100 000000000000 00000000 001123467789999999999999
Q ss_pred CCHHHHHHH
Q 040540 645 MHMTDAAAK 653 (669)
Q Consensus 645 ps~~~v~~~ 653 (669)
||+.|++..
T Consensus 367 psa~e~l~~ 375 (392)
T PHA03207 367 PSAQDILSL 375 (392)
T ss_pred CCHHHHhhC
Confidence 999999864
No 198
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.87 E-value=9.8e-23 Score=203.99 Aligned_cols=183 Identities=20% Similarity=0.255 Sum_probs=141.1
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..+..++|+|++++++++......++++||+++++|.+++... ..+++.....++.++++|+.|||. .
T Consensus 49 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~----~ 123 (263)
T cd06625 49 NALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHS----N 123 (263)
T ss_pred HHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 35667899999999999999999999988999999999999999999753 457888889999999999999995 4
Q ss_pred CeeecCCCCcc---------------------c----c---cccccccccCccccccCCCcCccccchhhHHHHHHHHhC
Q 040540 527 PIIHCEGEDSV---------------------T----Q---TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 527 ~i~h~d~~~~~---------------------~----~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg 578 (669)
+++|+|+++.. . . ....|+..|+|||+..+..++.++||||+||++|||++|
T Consensus 124 ~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g 203 (263)
T cd06625 124 MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTE 203 (263)
T ss_pred CeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhC
Confidence 79999988430 0 0 112367789999999988899999999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+.||..... ........ ... .. +.+ +......+.+++.+||..+|.+||++.|+++
T Consensus 204 ~~p~~~~~~--~~~~~~~~--~~~-~~----~~~---------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 204 KPPWAEFEA--MAAIFKIA--TQP-TN----PQL---------PSHVSPDARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred CCCccccch--HHHHHHHh--ccC-CC----CCC---------CccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence 999865311 11111111 000 00 000 1223445789999999999999999999976
No 199
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.87 E-value=4.2e-23 Score=207.98 Aligned_cols=176 Identities=20% Similarity=0.268 Sum_probs=139.0
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+....|-.++....++.+|+++.++++.+..||||||.|||++..+|... ..+++....-++.+.+-|++-+|+.
T Consensus 186 ~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~-~~L~e~~arfYiaE~vlAI~~iH~~---- 260 (550)
T KOG0605|consen 186 EHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRK-DTLTEDWARFYIAETVLAIESIHQL---- 260 (550)
T ss_pred HHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhc-CcCchHHHHHHHHHHHHHHHHHHHc----
Confidence 34567888888899999999999999999999999999999999999864 4577777777888899999999954
Q ss_pred CeeecCCCCc----------------------------------------------------------------------
Q 040540 527 PIIHCEGEDS---------------------------------------------------------------------- 536 (669)
Q Consensus 527 ~i~h~d~~~~---------------------------------------------------------------------- 536 (669)
++||||+|+.
T Consensus 261 gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~n 340 (550)
T KOG0605|consen 261 GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRN 340 (550)
T ss_pred CcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhh
Confidence 8999999831
Q ss_pred --ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCCc--cHHHHHHHhCCCCccccccccc
Q 040540 537 --VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEM--SLRRWVKESLPHRLSEVVDTNL 612 (669)
Q Consensus 537 --~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~ 612 (669)
....+.+|||-|||||++.+..|+..+|+||+|||+|||+.|-+||.+...... .+..|....
T Consensus 341 rr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l------------- 407 (550)
T KOG0605|consen 341 RRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETL------------- 407 (550)
T ss_pred hhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhc-------------
Confidence 012234699999999999999999999999999999999999999976332221 123332111
Q ss_pred cchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC
Q 040540 613 VREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH 646 (669)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps 646 (669)
.+|...+...++.++|.+|+. ||++|-.
T Consensus 408 -----~fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 408 -----KFPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred -----cCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 111222334678999999999 9999975
No 200
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.87 E-value=1.2e-22 Score=208.66 Aligned_cols=173 Identities=20% Similarity=0.195 Sum_probs=131.3
Q ss_pred hhhhhc-cccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeee
Q 040540 452 ECEVLR-NVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH 530 (669)
Q Consensus 452 e~~~l~-~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h 530 (669)
|...+. ..+|||++++++.+......++||||+++|+|.+++... ..+++.....++.|++.|+.|||. .+|+|
T Consensus 45 e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~----~~ivH 119 (316)
T cd05592 45 ERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHK----KGIIY 119 (316)
T ss_pred HHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CCEEe
Confidence 444444 348999999999998888999999999999999999754 457888888999999999999995 48999
Q ss_pred cCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcC
Q 040540 531 CEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 585 (669)
Q Consensus 531 ~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 585 (669)
||+|+.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 120 ~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~ 199 (316)
T cd05592 120 RDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGE 199 (316)
T ss_pred CCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCC
Confidence 9998420 011235899999999998888999999999999999999999999753
Q ss_pred CCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 586 FTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 586 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
.. ..+..-+....+ .+ +......+.+++.+||+.||++||++.+
T Consensus 200 ~~--~~~~~~i~~~~~---------~~---------~~~~~~~~~~ll~~~l~~~P~~R~~~~~ 243 (316)
T cd05592 200 DE--DELFDSILNDRP---------HF---------PRWISKEAKDCLSKLFERDPTKRLGVDG 243 (316)
T ss_pred CH--HHHHHHHHcCCC---------CC---------CCCCCHHHHHHHHHHccCCHHHcCCChH
Confidence 21 111111111100 00 1122345678999999999999998753
No 201
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.87 E-value=8.9e-23 Score=226.95 Aligned_cols=192 Identities=18% Similarity=0.256 Sum_probs=144.8
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC----------CCccCHHHHHHHHHhHHhhh
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH----------NYFLDILERLNIMIDVGSAL 516 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~----------~~~l~~~~~~~i~~~i~~~l 516 (669)
+.+..|+.++..++|||++++++.+...+..+++|||+++|+|.+++... ....++....+++.++++|+
T Consensus 47 ~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL 126 (932)
T PRK13184 47 KRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATI 126 (932)
T ss_pred HHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHH
Confidence 35677899999999999999999999888999999999999999998631 12356677889999999999
Q ss_pred hhhhcCCCCCCeeecCCCCccc------------------c-------------------------cccccccccCcccc
Q 040540 517 EYLRHGHSSAPIIHCEGEDSVT------------------Q-------------------------TTTMATIGYMAPEY 553 (669)
Q Consensus 517 ~~lh~~~~~~~i~h~d~~~~~~------------------~-------------------------~~~~gt~~y~aPE~ 553 (669)
+|||. .+|+|||+|+... . ...+||+.|||||+
T Consensus 127 ~yLHs----~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~ 202 (932)
T PRK13184 127 EYVHS----KGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPER 202 (932)
T ss_pred HHHHH----CCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHH
Confidence 99995 4799999995310 0 01258999999999
Q ss_pred ccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHH
Q 040540 554 GSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLA 633 (669)
Q Consensus 554 ~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 633 (669)
+.+..++.++|||||||++|||+||+.||........... ... .++.- .....+.+..+.+++
T Consensus 203 l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~----~~i-------~~P~~------~~p~~~iP~~L~~LI 265 (932)
T PRK13184 203 LLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYR----DVI-------LSPIE------VAPYREIPPFLSQIA 265 (932)
T ss_pred hcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhh----hhc-------cChhh------ccccccCCHHHHHHH
Confidence 9988899999999999999999999999865221111000 000 00000 000123345578899
Q ss_pred hhcccCCCCCCC-CHHHHHHHHHHhHH
Q 040540 634 LDCCMESPDKRM-HMTDAAAKLKKIKV 659 (669)
Q Consensus 634 ~~c~~~~P~~Rp-s~~~v~~~l~~~~~ 659 (669)
.+|++.||++|| +++++.+.|+....
T Consensus 266 ~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 266 MKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 999999999996 67888888887654
No 202
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.87 E-value=1.2e-22 Score=208.87 Aligned_cols=177 Identities=19% Similarity=0.187 Sum_probs=134.5
Q ss_pred chhhhhhcc-ccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 450 DSECEVLRN-VRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 450 ~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
..|...+.. .+|++++++++.+...+..++||||+++|+|.+++... ..+++.....++.++++|++|||. .++
T Consensus 43 ~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~----~~i 117 (316)
T cd05620 43 MVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHS----KGI 117 (316)
T ss_pred HHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CCe
Confidence 345555543 48999999999999889999999999999999998753 457888899999999999999994 489
Q ss_pred eecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 529 IHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 529 ~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
+|||+|+.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||.
T Consensus 118 vHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~ 197 (316)
T cd05620 118 IYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred EecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence 999998430 0112348999999999998889999999999999999999999996
Q ss_pred cCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH-HHH
Q 040540 584 EMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMT-DAA 651 (669)
Q Consensus 584 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~-~v~ 651 (669)
... ...+.+.+....+ .+ +.....++.+++.+|+..||++||++. ++.
T Consensus 198 ~~~--~~~~~~~~~~~~~---------~~---------~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 198 GDD--EDELFESIRVDTP---------HY---------PRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCC--HHHHHHHHHhCCC---------CC---------CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 532 1112211111110 00 111234567999999999999999974 554
No 203
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.87 E-value=2.4e-22 Score=200.22 Aligned_cols=183 Identities=21% Similarity=0.290 Sum_probs=141.9
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+.+..|+..++.++|+|++++++.+......++||||+++++|.+++... ...+++.....++.++++|++|||.
T Consensus 44 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~---- 119 (256)
T cd08220 44 LAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT---- 119 (256)
T ss_pred HHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh----
Confidence 34667899999999999999999888888889999999999999999764 3458899999999999999999994
Q ss_pred CCeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCC
Q 040540 526 APIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 526 ~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
.+++|+|+++.. ......|+..|+|||...+..++.++|||||||++|||++|+.
T Consensus 120 ~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~ 199 (256)
T cd08220 120 KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKR 199 (256)
T ss_pred CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCC
Confidence 489999988431 0011246789999999988888999999999999999999999
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
||..... ............... +......+.+++.+||..+|++|||+.|+++
T Consensus 200 ~~~~~~~--~~~~~~~~~~~~~~~-----------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 200 AFEAANL--PALVLKIMSGTFAPI-----------------SDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CcccCch--HHHHHHHHhcCCCCC-----------------CCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 9865321 112211111110000 1123445789999999999999999999975
No 204
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.87 E-value=9.1e-23 Score=207.73 Aligned_cols=182 Identities=19% Similarity=0.236 Sum_probs=140.8
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..++.++|+|++++++.+......++|+||+++++|.+++.. ..+++.++..++.++++|++|||. .+
T Consensus 62 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~----~~ 135 (296)
T cd06655 62 LIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE--TCMDEAQIAAVCRECLQALEFLHA----NQ 135 (296)
T ss_pred HHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 455788899999999999999999888899999999999999999864 358999999999999999999994 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|+|+++.. ......|+..|+|||...+..++.++|||||||++|||++|+.||
T Consensus 136 i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf 215 (296)
T cd06655 136 VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY 215 (296)
T ss_pred cccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 9999988430 011224788999999998888999999999999999999999998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
....... .+. ........ .+ ..+......+.+++.+||..||++||++.+++.
T Consensus 216 ~~~~~~~-~~~-~~~~~~~~--------~~-------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 216 LNENPLR-ALY-LIATNGTP--------EL-------QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred CCCCHHH-HHH-HHHhcCCc--------cc-------CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 6532111 111 11110000 00 011223446788999999999999999999975
No 205
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.87 E-value=2.7e-23 Score=217.42 Aligned_cols=188 Identities=21% Similarity=0.354 Sum_probs=152.4
Q ss_pred cccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
..++..|.-.|.+++|+|++++++.|.... ..||.+|||.|.|.++++.++..+.-...+++..|||+|+.|||.
T Consensus 742 s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~---- 816 (1177)
T KOG1025|consen 742 SIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEE---- 816 (1177)
T ss_pred hHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh----
Confidence 345677888999999999999999998766 779999999999999999988889999999999999999999984
Q ss_pred CCeeecCCCCc-------------------------ccccccc--cccccCccccccCCCcCccccchhhHHHHHHHHh-
Q 040540 526 APIIHCEGEDS-------------------------VTQTTTM--ATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT- 577 (669)
Q Consensus 526 ~~i~h~d~~~~-------------------------~~~~~~~--gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t- 577 (669)
.+++|||+..- ....... -.+.|||=|.+....|+.++|||||||++||++|
T Consensus 817 qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTF 896 (1177)
T KOG1025|consen 817 QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTF 896 (1177)
T ss_pred cchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhc
Confidence 47999997621 0111111 2356888888888999999999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
|..||+....+++ +.+...+.|.+.+..+..++..++.+||..|++.||++++......+.
T Consensus 897 Ga~Py~gi~~~eI-------------------~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ 957 (1177)
T KOG1025|consen 897 GAKPYDGIPAEEI-------------------PDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRM 957 (1177)
T ss_pred CCCccCCCCHHHh-------------------hHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHH
Confidence 8899987543221 112223344556778889999999999999999999999998887664
No 206
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.87 E-value=3.3e-22 Score=208.03 Aligned_cols=190 Identities=23% Similarity=0.385 Sum_probs=140.8
Q ss_pred cCchhhhhhccc-cccccceeccccccc-cccceeeccCCCCChHHhhhcCC----------------------------
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSNP-DFKALVLEFMPNGSLEKWLYSHN---------------------------- 497 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~~-~~~~lv~ey~~~g~L~~~l~~~~---------------------------- 497 (669)
.+..|+..+..+ +|+|+++++++|... ...+++|||+++|+|.++++...
T Consensus 56 ~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (343)
T cd05103 56 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLK 135 (343)
T ss_pred HHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhh
Confidence 456788899888 689999999988654 45689999999999999986421
Q ss_pred --------------------------------------CccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCccc-
Q 040540 498 --------------------------------------YFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVT- 538 (669)
Q Consensus 498 --------------------------------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~~~- 538 (669)
..+++.....++.++++|++|||. .+++|+|+|+...
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~----~~i~H~dikp~Nil 211 (343)
T cd05103 136 RRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS----RKCIHRDLAARNIL 211 (343)
T ss_pred hhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh----CCeecCCCccCeEE
Confidence 235777888999999999999994 4899999995410
Q ss_pred --------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-CCCCCCcCCCCCcc
Q 040540 539 --------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMS 591 (669)
Q Consensus 539 --------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~ 591 (669)
.....++..|+|||++.+..++.++|||||||++|||++ |..||....... .
T Consensus 212 ~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~ 290 (343)
T cd05103 212 LSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-E 290 (343)
T ss_pred EcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-H
Confidence 001123567999999988889999999999999999997 898986532211 1
Q ss_pred HHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhHH
Q 040540 592 LRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIKV 659 (669)
Q Consensus 592 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~~ 659 (669)
+...+........ +......+.+++.+||+.+|++||++.||++.|+.+.+
T Consensus 291 ~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 291 FCRRLKEGTRMRA-----------------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHHhccCCCCC-----------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1111111110000 11122357899999999999999999999999998765
No 207
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.87 E-value=2e-22 Score=201.59 Aligned_cols=187 Identities=24% Similarity=0.402 Sum_probs=144.9
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
..+..|+..++.++|+|++++++.+......+++|||+++++|.+++.... ..+++.....++.+++.|+.|||.
T Consensus 46 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~---- 121 (261)
T cd05034 46 EAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLES---- 121 (261)
T ss_pred HHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh----
Confidence 356678999999999999999999988888999999999999999997643 468999999999999999999994
Q ss_pred CCeeecCCCCcccc--------------------------cccccccccCccccccCCCcCccccchhhHHHHHHHHh-C
Q 040540 526 APIIHCEGEDSVTQ--------------------------TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-R 578 (669)
Q Consensus 526 ~~i~h~d~~~~~~~--------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g 578 (669)
.+++|+|+++.... ....++..|+|||...+..++.++|||||||++||++| |
T Consensus 122 ~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g 201 (261)
T cd05034 122 RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYG 201 (261)
T ss_pred CCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCC
Confidence 47999999854100 00113457999999988889999999999999999999 9
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKK 656 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~ 656 (669)
+.||.... .....+........ +.+.+.+..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 202 ~~p~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 202 RVPYPGMT--NREVLEQVERGYRM-----------------PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCC--HHHHHHHHHcCCCC-----------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 99986532 11122222111110 0011223467899999999999999999999998875
No 208
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.87 E-value=2.7e-22 Score=199.66 Aligned_cols=186 Identities=25% Similarity=0.432 Sum_probs=141.6
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
..+..|+..+..++|+|++++++.+... ..+++|||+++++|.++++... ..+++..+.+++.++++|+.|+|.
T Consensus 44 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~---- 118 (254)
T cd05083 44 QAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES---- 118 (254)
T ss_pred HHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh----
Confidence 3566789999999999999999988654 4689999999999999997543 357899999999999999999994
Q ss_pred CCeeecCCCCccc----------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh-CCCCC
Q 040540 526 APIIHCEGEDSVT----------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPT 582 (669)
Q Consensus 526 ~~i~h~d~~~~~~----------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~ 582 (669)
.+++|+|+++... ......+..|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 119 ~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~ 198 (254)
T cd05083 119 KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPY 198 (254)
T ss_pred CCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 5899999995410 011123457999999988889999999999999999998 99998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKK 656 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~ 656 (669)
..... ............. ..+...+..+.+++.+||+.+|++||++.++++.|++
T Consensus 199 ~~~~~--~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 199 PKMSL--KEVKECVEKGYRM-----------------EPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ccCCH--HHHHHHHhCCCCC-----------------CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 65321 1112221111100 0012234567899999999999999999999998864
No 209
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=1.8e-22 Score=201.65 Aligned_cols=195 Identities=24% Similarity=0.261 Sum_probs=144.4
Q ss_pred Cchhhhhhccccccccceeccccccc--cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNP--DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+|+.+++++.||||+++.+..... ..+|+|+|||+. +|.-++...+..++..+...|+.|++.||+|+|. .
T Consensus 163 ~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~----~ 237 (560)
T KOG0600|consen 163 AIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHS----R 237 (560)
T ss_pred HHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhh----c
Confidence 45799999999999999999987765 678999999985 9999998777789999999999999999999994 5
Q ss_pred CeeecCCCCc--------------------------ccccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCC
Q 040540 527 PIIHCEGEDS--------------------------VTQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 527 ~i~h~d~~~~--------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~ 579 (669)
+|+|||+|.+ ...+..+-|..|.|||.+.+ ..|+.++|+||.|||+.||++|+
T Consensus 238 gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gk 317 (560)
T KOG0600|consen 238 GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGK 317 (560)
T ss_pred CeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCC
Confidence 8999999943 12344567999999999887 45999999999999999999999
Q ss_pred CCCCcCCCCCccH------------HHHHHHhCCCCccccccccccchhhhh-hhhHHHHHHHHHHHhhcccCCCCCCCC
Q 040540 580 RPTDEMFTGEMSL------------RRWVKESLPHRLSEVVDTNLVREEQAF-SAKMDCLLSIMDLALDCCMESPDKRMH 646 (669)
Q Consensus 580 ~p~~~~~~~~~~l------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~c~~~~P~~Rps 646 (669)
+.+.+... ..++ ..|....+|. ...+.+...-. .+. +.....+..+.+++..++..||++|.|
T Consensus 318 PI~~G~tE-veQl~kIfklcGSP~e~~W~~~kLP~--~~~~kp~~~y~-r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~t 393 (560)
T KOG0600|consen 318 PILQGRTE-VEQLHKIFKLCGSPTEDYWPVSKLPH--ATIFKPQQPYK-RRLRETFKDFPASALDLLEKLLSLDPDKRGT 393 (560)
T ss_pred CCcCCccH-HHHHHHHHHHhCCCChhccccccCCc--ccccCCCCccc-chHHHHhccCCHHHHHHHHHHhccCcccccc
Confidence 98876321 1111 1122112221 01111100000 000 012234456789999999999999999
Q ss_pred HHHHHH
Q 040540 647 MTDAAA 652 (669)
Q Consensus 647 ~~~v~~ 652 (669)
+.++++
T Consensus 394 A~~aL~ 399 (560)
T KOG0600|consen 394 ASSALQ 399 (560)
T ss_pred HHHHhc
Confidence 999875
No 210
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.87 E-value=1e-22 Score=209.89 Aligned_cols=179 Identities=20% Similarity=0.160 Sum_probs=136.0
Q ss_pred Cchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 449 FDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 449 ~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
+..|..++... +||+++++++++......++||||+++|+|..++... ..+++.....++.++++|++|||. .+
T Consensus 42 ~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~----~~ 116 (321)
T cd05591 42 TMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHR----HG 116 (321)
T ss_pred HHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 44566666644 7999999999999888999999999999999998754 458888999999999999999995 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|||+|+.. ......||+.|+|||++.+..++.++|||||||++|||+||+.||
T Consensus 117 ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf 196 (321)
T cd05591 117 VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPF 196 (321)
T ss_pred eeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCC
Confidence 9999998430 011234899999999998888999999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-------CHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM-------HMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp-------s~~~v~~ 652 (669)
..... ..+.+.+.. .. ... +......+.+++.+|++.||++|| ++.++++
T Consensus 197 ~~~~~--~~~~~~i~~---~~---~~~------------p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 197 EADNE--DDLFESILH---DD---VLY------------PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred CCCCH--HHHHHHHHc---CC---CCC------------CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 75321 111111111 00 000 111234568999999999999999 6666653
No 211
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.87 E-value=2.1e-22 Score=203.28 Aligned_cols=182 Identities=18% Similarity=0.232 Sum_probs=142.6
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+..++.+.|++++++++.+......++||||+++|+|.+++.. ..+++.+...++.++++|++|+|+ .
T Consensus 47 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~----~ 120 (277)
T cd06640 47 EDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHS----E 120 (277)
T ss_pred HHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 3566788899999999999999999988999999999999999999974 357888889999999999999994 4
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+++|+|+++.. ......++..|+|||+..+..++.++|||||||++|||+||+.|
T Consensus 121 ~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p 200 (277)
T cd06640 121 KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 200 (277)
T ss_pred CccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCC
Confidence 79999988431 01112467889999999888889999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
+....... ..... +.. ..+. .....+..+.+++.+||+.+|++||++.|+++.
T Consensus 201 ~~~~~~~~--~~~~~----~~~----~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 201 NSDMHPMR--VLFLI----PKN----NPPT---------LTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCcChHh--Hhhhh----hcC----CCCC---------CchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 87532211 00000 000 0011 123455678899999999999999999999764
No 212
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.87 E-value=1.7e-22 Score=201.51 Aligned_cols=182 Identities=21% Similarity=0.272 Sum_probs=139.4
Q ss_pred cCchhhhhhccccccccceecccccc-ccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSN-PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
.+..|+..++.++|+|++++++.+.. ....+++|||+++++|.++++.. ...+++.+..+++.+++.|++|+|.
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~---- 120 (257)
T cd08223 45 AAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE---- 120 (257)
T ss_pred HHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh----
Confidence 45678889999999999999887654 44568999999999999999763 3458999999999999999999995
Q ss_pred CCeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCC
Q 040540 526 APIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 526 ~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
.+++|+|+++.. ......|++.|+|||+..+..++.++|||||||+++||++|+.
T Consensus 121 ~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~ 200 (257)
T cd08223 121 KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKH 200 (257)
T ss_pred CCeeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCC
Confidence 479999998541 0112247889999999988889999999999999999999999
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
||.... ............. +. .+......+.+++.+|++.+|++||++.++++
T Consensus 201 ~~~~~~-----~~~~~~~~~~~~~-----~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 201 AFNAKD-----MNSLVYRIIEGKL-----PP---------MPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred CCCCCC-----HHHHHHHHHhcCC-----CC---------CccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 986422 1111111100000 00 01233456789999999999999999999975
No 213
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.87 E-value=3.4e-22 Score=213.12 Aligned_cols=200 Identities=17% Similarity=0.173 Sum_probs=142.1
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.++++++|+||+++++++......++||||+. ++|.+++......+++.++..|+.|+++||.|||. .+
T Consensus 206 ~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~----~g 280 (461)
T PHA03211 206 SSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHG----EG 280 (461)
T ss_pred CHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 34579999999999999999999988888899999995 79999987655679999999999999999999994 47
Q ss_pred eeecCCCCcc---------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCC
Q 040540 528 IIHCEGEDSV---------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 528 i~h~d~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
|+|||+|+.. ......||..|||||++.+..++.++|||||||++|||++|..
T Consensus 281 IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~ 360 (461)
T PHA03211 281 IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTA 360 (461)
T ss_pred EEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCC
Confidence 9999999430 0112348999999999998889999999999999999999987
Q ss_pred CCCcCCCC------CccHHHHHHHhCC--CCccccccccccc-----------hhhhhhhhH---HHHHHHHHHHhhccc
Q 040540 581 PTDEMFTG------EMSLRRWVKESLP--HRLSEVVDTNLVR-----------EEQAFSAKM---DCLLSIMDLALDCCM 638 (669)
Q Consensus 581 p~~~~~~~------~~~l~~~~~~~~~--~~~~~~~~~~~~~-----------~~~~~~~~~---~~~~~~~~l~~~c~~ 638 (669)
|+...... ...+.+.++.... ..........+.. .....+.+. .....+.+++.+|++
T Consensus 361 ~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 440 (461)
T PHA03211 361 SLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALT 440 (461)
T ss_pred CcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcc
Confidence 65432111 0112222221100 0000000000000 000000011 223467899999999
Q ss_pred CCCCCCCCHHHHHH
Q 040540 639 ESPDKRMHMTDAAA 652 (669)
Q Consensus 639 ~~P~~Rps~~~v~~ 652 (669)
.||.+|||+.|+++
T Consensus 441 ~DP~~RPsa~elL~ 454 (461)
T PHA03211 441 FDGARRPSAAELLR 454 (461)
T ss_pred cChhhCcCHHHHhh
Confidence 99999999999986
No 214
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.87 E-value=3e-22 Score=200.76 Aligned_cols=190 Identities=21% Similarity=0.218 Sum_probs=146.0
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..++.++|+|++++++.+......++++||+++++|.+++......++......++.++++|++|+|. ..
T Consensus 44 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~ 120 (265)
T cd06605 44 KQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHE---KH 120 (265)
T ss_pred HHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcC---CC
Confidence 346678888999999999999999988899999999999999999998654678888889999999999999994 25
Q ss_pred CeeecCCCCcc-----------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 527 PIIHCEGEDSV-----------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 527 ~i~h~d~~~~~-----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
+++|+|+++.. ......|+..|+|||+..+..++.++||||||+++|||++|+.||.
T Consensus 121 ~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~ 200 (265)
T cd06605 121 KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYP 200 (265)
T ss_pred CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 89999988431 0011347889999999988889999999999999999999999987
Q ss_pred cCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 584 EMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 584 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
..........+.++....... +.+. .......+.+++.+||..+|++||++.+++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~-----~~~~--------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 201 PENDPPDGIFELLQYIVNEPP-----PRLP--------SGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred ccccccccHHHHHHHHhcCCC-----CCCC--------hhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 543222222222222211100 0010 1114456789999999999999999999875
No 215
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.87 E-value=1.7e-22 Score=216.40 Aligned_cols=197 Identities=17% Similarity=0.185 Sum_probs=134.5
Q ss_pred chhhhhhccccccccceecccccc--------ccccceeeccCCCCChHHhhhc---CCCccCHHHHHHHHHhHHhhhhh
Q 040540 450 DSECEVLRNVRHRNLIKIISSCSN--------PDFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEY 518 (669)
Q Consensus 450 ~~e~~~l~~l~h~niv~l~~~~~~--------~~~~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~ 518 (669)
..|+.+++.++|+|++++++++.. ..+.++||||++ +++.+++.. ....+++.....++.|+++||+|
T Consensus 107 ~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~y 185 (440)
T PTZ00036 107 NRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAY 185 (440)
T ss_pred HHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 358899999999999998776532 124568999998 578777653 34568888999999999999999
Q ss_pred hhcCCCCCCeeecCCCCcc-------------------------cccccccccccCccccccC-CCcCccccchhhHHHH
Q 040540 519 LRHGHSSAPIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLL 572 (669)
Q Consensus 519 lh~~~~~~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil 572 (669)
||. .+|+|||+|+.. ......||+.|+|||++.+ ..|+.++|||||||++
T Consensus 186 LH~----~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil 261 (440)
T PTZ00036 186 IHS----KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCII 261 (440)
T ss_pred HHH----CCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHH
Confidence 995 479999999430 0112357899999998765 4689999999999999
Q ss_pred HHHHhCCCCCCcCCCCCccHHHHHHHhC-CC---------CccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCC
Q 040540 573 METFTRKRPTDEMFTGEMSLRRWVKESL-PH---------RLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPD 642 (669)
Q Consensus 573 ~el~tg~~p~~~~~~~~~~l~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~ 642 (669)
|||+||+.||..... ...+...+...- +. ...++..+.+.....+...+...+.++.+++.+||+.||.
T Consensus 262 ~elltG~~pf~~~~~-~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~ 340 (440)
T PTZ00036 262 AEMILGYPIFSGQSS-VDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPL 340 (440)
T ss_pred HHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChh
Confidence 999999999965321 111111111100 00 0000000111110000011223446788999999999999
Q ss_pred CCCCHHHHHH
Q 040540 643 KRMHMTDAAA 652 (669)
Q Consensus 643 ~Rps~~~v~~ 652 (669)
+|||+.|+++
T Consensus 341 ~R~ta~e~l~ 350 (440)
T PTZ00036 341 KRLNPIEALA 350 (440)
T ss_pred HCcCHHHHhC
Confidence 9999999974
No 216
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.87 E-value=1.4e-22 Score=209.44 Aligned_cols=182 Identities=18% Similarity=0.181 Sum_probs=136.0
Q ss_pred cCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|..++.++ +|++++.+++++......++||||+++|+|.+++... ..+++..+..++.++++|++|||. .
T Consensus 41 ~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~----~ 115 (327)
T cd05617 41 WVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHE----R 115 (327)
T ss_pred HHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 345677777776 6999999999998888899999999999999988743 458999999999999999999995 4
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+++|||+|+.. ......||+.|+|||++.+..++.++|||||||++|||+||+.|
T Consensus 116 ~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~p 195 (327)
T cd05617 116 GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSP 195 (327)
T ss_pred CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCC
Confidence 79999998430 01123589999999999888899999999999999999999999
Q ss_pred CCcCCCC-CccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH
Q 040540 582 TDEMFTG-EMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMT 648 (669)
Q Consensus 582 ~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~ 648 (669)
|...... ......++.......... .+......+.+++.+|++.||++||++.
T Consensus 196 f~~~~~~~~~~~~~~~~~~~~~~~~~--------------~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 196 FDIITDNPDMNTEDYLFQVILEKPIR--------------IPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred CCccCCCcccccHHHHHHHHHhCCCC--------------CCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 9643211 111111211111100000 0112234567999999999999999853
No 217
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.87 E-value=2.7e-22 Score=203.26 Aligned_cols=199 Identities=18% Similarity=0.187 Sum_probs=139.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..++.++|+|++++++.+......++++||++ +++.+++......+++.....++.|+++|+.|||. .+
T Consensus 45 ~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~----~~ 119 (284)
T cd07839 45 SALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHS----HN 119 (284)
T ss_pred chhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 45678999999999999999999998889999999997 58888887655678999999999999999999995 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCC-CcCccccchhhHHHHHHHHhCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
++|+|+++.. ......++..|+|||++.+. .++.++|||||||++|||+||+.|
T Consensus 120 i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p 199 (284)
T cd07839 120 VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 199 (284)
T ss_pred EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCC
Confidence 9999988431 00122467889999987664 478999999999999999999998
Q ss_pred CCcCCCCCccHHHHHHHhCCC-C------cccccc----ccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPH-R------LSEVVD----TNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~-~------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v 650 (669)
+.........+. ...+.... . .....+ +..................+.+++.+|++.||++|||++++
T Consensus 200 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~i 278 (284)
T cd07839 200 LFPGNDVDDQLK-RIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEA 278 (284)
T ss_pred CcCCCCHHHHHH-HHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHH
Confidence 654222111111 11110000 0 000000 00000000000111234677899999999999999999998
Q ss_pred HH
Q 040540 651 AA 652 (669)
Q Consensus 651 ~~ 652 (669)
++
T Consensus 279 l~ 280 (284)
T cd07839 279 LQ 280 (284)
T ss_pred hc
Confidence 75
No 218
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.87 E-value=6.5e-22 Score=198.75 Aligned_cols=187 Identities=20% Similarity=0.292 Sum_probs=141.8
Q ss_pred cCchhhhhhcc-ccccccceeccccccccccceeeccCCCCChHHhhhc---CCCccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 448 SFDSECEVLRN-VRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 448 ~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
.+..|+..+.+ ++|+|++++++.+......+++|||+++++|.+++.. ....+++.....++.+++.|+.|||+.
T Consensus 54 ~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~- 132 (269)
T cd08528 54 DIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE- 132 (269)
T ss_pred HHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC-
Confidence 45567776754 7899999999999999999999999999999998743 345688889999999999999999942
Q ss_pred CCCCeeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCC
Q 040540 524 SSAPIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 524 ~~~~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~ 579 (669)
.+++|+|+++.. ......|+..|+|||+..+..++.++||||||+++|||++|+
T Consensus 133 --~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~ 210 (269)
T cd08528 133 --KRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQ 210 (269)
T ss_pred --CceeecCCCHHHEEECCCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCC
Confidence 479999988420 111234788999999998888999999999999999999999
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHH
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~ 655 (669)
.||.... .......+... ... + .. .......+.+++.+||+.||++||++.||..+++
T Consensus 211 ~p~~~~~--~~~~~~~~~~~---~~~----~-~~--------~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 211 PPFYSTN--MLSLATKIVEA---VYE----P-LP--------EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CcccccC--HHHHHHHHhhc---cCC----c-CC--------cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 9986421 11111111111 000 0 00 0122346789999999999999999999999875
No 219
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.87 E-value=3e-22 Score=201.76 Aligned_cols=181 Identities=20% Similarity=0.217 Sum_probs=141.1
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.+++.++|+|++++++.+..+...++|+||+++++|.+++... .+++.....++.+++.|+.|||. .+
T Consensus 45 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~----~~ 118 (274)
T cd06609 45 DIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHE----EG 118 (274)
T ss_pred HHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 4567888999999999999999998888899999999999999999753 68999999999999999999995 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|+|+++.. ......|+..|+|||+..+..++.++|||||||++|||+||+.||
T Consensus 119 i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~ 198 (274)
T cd06609 119 KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPL 198 (274)
T ss_pred cccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 9999988430 011234788899999998888999999999999999999999998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
...... .....+....+ +.+.. ......+.+++.+||..+|++||+++++++
T Consensus 199 ~~~~~~--~~~~~~~~~~~--------~~~~~--------~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 199 SDLHPM--RVLFLIPKNNP--------PSLEG--------NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ccCchH--HHHHHhhhcCC--------CCCcc--------cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 653211 11111111111 11100 013345789999999999999999999976
No 220
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.87 E-value=2.9e-22 Score=207.31 Aligned_cols=209 Identities=19% Similarity=0.236 Sum_probs=146.0
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+.+..|..++..++|+|++++++++......++|+||++++++.+++... ...+++.....++.|++.||+|||.
T Consensus 44 ~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---- 119 (328)
T cd08226 44 KALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQ---- 119 (328)
T ss_pred HHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHh----
Confidence 45667888888899999999999999988999999999999999999753 2357888888999999999999994
Q ss_pred CCeeecCCCCcccc------------------------c--------ccccccccCccccccCC--CcCccccchhhHHH
Q 040540 526 APIIHCEGEDSVTQ------------------------T--------TTMATIGYMAPEYGSEG--IVSAKCDVYSYGVL 571 (669)
Q Consensus 526 ~~i~h~d~~~~~~~------------------------~--------~~~gt~~y~aPE~~~~~--~~~~~~Dv~s~Gvi 571 (669)
.+++|||+|+.... . ...++..|||||++.+. .++.++|||||||+
T Consensus 120 ~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~ 199 (328)
T cd08226 120 NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGIT 199 (328)
T ss_pred CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHH
Confidence 47999999954100 0 01134569999998763 47899999999999
Q ss_pred HHHHHhCCCCCCcCCCCCccHHHHHHHhCCC-----------------------Cccccc-c----ccccchhhhhhhhH
Q 040540 572 LMETFTRKRPTDEMFTGEMSLRRWVKESLPH-----------------------RLSEVV-D----TNLVREEQAFSAKM 623 (669)
Q Consensus 572 l~el~tg~~p~~~~~~~~~~l~~~~~~~~~~-----------------------~~~~~~-~----~~~~~~~~~~~~~~ 623 (669)
+|||++|+.||....... .+.......... .+.+.. . ..+.....+.+.+.
T Consensus 200 l~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (328)
T cd08226 200 ACELATGRVPFQDMLRTQ-MLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSK 278 (328)
T ss_pred HHHHHhCCCCCCCcChHH-HHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhh
Confidence 999999999996532211 111111000000 000000 0 00000001112234
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCHHHHHH--HHHHhHHH
Q 040540 624 DCLLSIMDLALDCCMESPDKRMHMTDAAA--KLKKIKVK 660 (669)
Q Consensus 624 ~~~~~~~~l~~~c~~~~P~~Rps~~~v~~--~l~~~~~~ 660 (669)
.+...+.+++.+||+.||++|||+.|+++ .++.++..
T Consensus 279 ~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 279 TFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred hhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 56778899999999999999999999975 45555443
No 221
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.87 E-value=3.9e-22 Score=199.94 Aligned_cols=172 Identities=21% Similarity=0.222 Sum_probs=134.6
Q ss_pred cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCccc-
Q 040540 460 RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVT- 538 (669)
Q Consensus 460 ~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~~~- 538 (669)
+|+|++++++.+..++..++||||+++|+|.+++... ..+++.+...++.|+++|+.|+|. .+++|+|+++...
T Consensus 67 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~----~~i~H~dl~p~nil 141 (267)
T PHA03390 67 DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHK----HNIIHNDIKLENVL 141 (267)
T ss_pred cCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh----CCeeeCCCCHHHEE
Confidence 6999999999998888999999999999999999764 378999999999999999999995 4799999985310
Q ss_pred ---------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHH
Q 040540 539 ---------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVK 597 (669)
Q Consensus 539 ---------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~ 597 (669)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||............+..
T Consensus 142 ~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 221 (267)
T PHA03390 142 YDRAKDRIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLK 221 (267)
T ss_pred EeCCCCeEEEecCccceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHH
Confidence 01124788999999998888999999999999999999999999754333323333332
Q ss_pred HhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC-HHHHHH
Q 040540 598 ESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH-MTDAAA 652 (669)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps-~~~v~~ 652 (669)
.. .... +.+......+.+++.+|++.+|.+||+ ++|+++
T Consensus 222 ~~-~~~~---------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 222 RQ-QKKL---------------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred hh-cccC---------------CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 22 1100 011234456789999999999999995 688864
No 222
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.87 E-value=1.9e-22 Score=202.44 Aligned_cols=185 Identities=19% Similarity=0.227 Sum_probs=138.3
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..++.++|+|++++++.+...+..++++||+++++|.+++... ..+++.+...++.+++.|+.|||.. +
T Consensus 52 ~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~----~ 126 (267)
T cd06645 52 VVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSK----G 126 (267)
T ss_pred HHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC----C
Confidence 3556888999999999999999998888999999999999999998754 4688999999999999999999954 7
Q ss_pred eeecCCCCcc-------------------------cccccccccccCcccccc---CCCcCccccchhhHHHHHHHHhCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGS---EGIVSAKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~ 579 (669)
++|+|+++.. ......|+..|+|||++. ...++.++|||||||++|||++|+
T Consensus 127 i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~ 206 (267)
T cd06645 127 KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQ 206 (267)
T ss_pred eecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCC
Confidence 9999988430 011225889999999874 345889999999999999999999
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
.|+....... .+......... .+.... .......+.+++.+|++.+|++||+++++++
T Consensus 207 ~p~~~~~~~~-~~~~~~~~~~~-------~~~~~~-------~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 207 PPMFDLHPMR-ALFLMTKSNFQ-------PPKLKD-------KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CCcccccchh-hHHhhhccCCC-------CCcccc-------cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 9986532111 11111111000 000000 0112335679999999999999999999875
No 223
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.87 E-value=3.5e-22 Score=208.79 Aligned_cols=128 Identities=23% Similarity=0.288 Sum_probs=110.5
Q ss_pred chhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCee
Q 040540 450 DSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPII 529 (669)
Q Consensus 450 ~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~ 529 (669)
..|..++..++|+|++++++++......++|+||+. ++|.+++......+++..+..|+.|+++||.|||. .+|+
T Consensus 105 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~----~~iv 179 (357)
T PHA03209 105 LIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHA----QRII 179 (357)
T ss_pred HHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH----CCee
Confidence 458889999999999999999998888999999995 69999997766678999999999999999999995 4799
Q ss_pred ecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 530 HCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 530 h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
|||+|+.. ......||..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 180 HrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 180 HRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cCCCCHHHEEECCCCCEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 99999531 011235899999999999888999999999999999999976655
No 224
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.87 E-value=3.4e-22 Score=204.82 Aligned_cols=183 Identities=25% Similarity=0.250 Sum_probs=139.7
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..+..++|+|++++.+.|......++||||++ |++.+++......+++..+..++.|++.|+.|||. .
T Consensus 60 ~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~----~ 134 (307)
T cd06607 60 QDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHS----H 134 (307)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 346678899999999999999999998888999999997 68888876555678999999999999999999994 4
Q ss_pred CeeecCCCCcc---------------------cccccccccccCcccccc---CCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 527 PIIHCEGEDSV---------------------TQTTTMATIGYMAPEYGS---EGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 527 ~i~h~d~~~~~---------------------~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+++|+|+++.. ......|+..|+|||+.. ...++.++|||||||++|||+||+.||
T Consensus 135 ~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~ 214 (307)
T cd06607 135 ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214 (307)
T ss_pred CceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCC
Confidence 79999988541 111234788999999874 355889999999999999999999998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
..... ...........+ +.+. .......+.+++.+||+.+|++||+|.+|+.
T Consensus 215 ~~~~~--~~~~~~~~~~~~--------~~~~--------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 215 FNMNA--MSALYHIAQNDS--------PTLS--------SNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred CCccH--HHHHHHHhcCCC--------CCCC--------chhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 65321 111111110000 0110 1234456889999999999999999999987
No 225
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.87 E-value=1.3e-22 Score=226.57 Aligned_cols=192 Identities=17% Similarity=0.204 Sum_probs=141.6
Q ss_pred ccCchhhhhhccccccccceecccccc--ccccceeeccCCCCChHHhhhcC---CCccCHHHHHHHHHhHHhhhhhhhc
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSN--PDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ey~~~g~L~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
..+..|+.++..++||||+++++++.. ....++||||+++|+|.++|... ...+++.....|+.|++.||+|||.
T Consensus 57 ~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs 136 (1021)
T PTZ00266 57 SQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHN 136 (1021)
T ss_pred HHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 346679999999999999999998744 45678999999999999999752 2468999999999999999999996
Q ss_pred CC---CCCCeeecCCCCccc-----------------------------------------ccccccccccCccccccC-
Q 040540 522 GH---SSAPIIHCEGEDSVT-----------------------------------------QTTTMATIGYMAPEYGSE- 556 (669)
Q Consensus 522 ~~---~~~~i~h~d~~~~~~-----------------------------------------~~~~~gt~~y~aPE~~~~- 556 (669)
.+ ...+|+|+|+|+... .....||+.|+|||++.+
T Consensus 137 ~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge 216 (1021)
T PTZ00266 137 LKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHE 216 (1021)
T ss_pred cccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhcc
Confidence 32 124699999985310 011248999999998854
Q ss_pred -CCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhh
Q 040540 557 -GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALD 635 (669)
Q Consensus 557 -~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 635 (669)
..++.++||||||||+|||+||+.||.... .+...+...... +.+. .......+.+++.+
T Consensus 217 ~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~----~~~qli~~lk~~-------p~lp--------i~~~S~eL~dLI~~ 277 (1021)
T PTZ00266 217 TKSYDDKSDMWALGCIIYELCSGKTPFHKAN----NFSQLISELKRG-------PDLP--------IKGKSKELNILIKN 277 (1021)
T ss_pred CCCCCchhHHHHHHHHHHHHHHCCCCCCcCC----cHHHHHHHHhcC-------CCCC--------cCCCCHHHHHHHHH
Confidence 448899999999999999999999996421 122222111100 0000 01123457899999
Q ss_pred cccCCCCCCCCHHHHHH--HHHHh
Q 040540 636 CCMESPDKRMHMTDAAA--KLKKI 657 (669)
Q Consensus 636 c~~~~P~~Rps~~~v~~--~l~~~ 657 (669)
||..+|.+||++.|++. .++.+
T Consensus 278 ~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 278 LLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred HhcCChhHCcCHHHHhccHHHhhc
Confidence 99999999999999984 44444
No 226
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.87 E-value=1.7e-22 Score=205.00 Aligned_cols=185 Identities=19% Similarity=0.248 Sum_probs=143.5
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+..+..++|+|++++++.+......++++||+++++|.+++......+++..+..++.+++.|+.|||. .
T Consensus 60 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~----~ 135 (286)
T cd06614 60 ELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHS----Q 135 (286)
T ss_pred HHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 356678899999999999999999988899999999999999999998755478999999999999999999994 5
Q ss_pred CeeecCCCCccc-------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDSVT-------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~~~-------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+++|+|+++... .....|+..|+|||+..+..++.++|||||||++|||++|+.|
T Consensus 136 gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p 215 (286)
T cd06614 136 NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPP 215 (286)
T ss_pred CeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCC
Confidence 899999884310 0112367889999999888899999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|...... ...........+ . ..........+.+++.+|++.+|++||++.++++
T Consensus 216 ~~~~~~~-~~~~~~~~~~~~----~------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 216 YLREPPL-RALFLITTKGIP----P------------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred CCCCCHH-HHHHHHHhcCCC----C------------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 8642111 111111111000 0 0011223456789999999999999999999975
No 227
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=3.4e-22 Score=216.58 Aligned_cols=182 Identities=24% Similarity=0.248 Sum_probs=138.4
Q ss_pred cCchhhhhhccccccccceecccccccc--------ccceeeccCCCCChHHhhhcC---CCccCHHHHHHHHHhHHhhh
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPD--------FKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGSAL 516 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~--------~~~lv~ey~~~g~L~~~l~~~---~~~l~~~~~~~i~~~i~~~l 516 (669)
.+..|+..+..++|+|++++...+.... ..++||||+++|+|.++++.. ...+++.....|+.|++.||
T Consensus 77 ~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL 156 (496)
T PTZ00283 77 RAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAV 156 (496)
T ss_pred HHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHH
Confidence 4557888899999999999877654321 357999999999999999752 34688888999999999999
Q ss_pred hhhhcCCCCCCeeecCCCCcc---------------------------cccccccccccCccccccCCCcCccccchhhH
Q 040540 517 EYLRHGHSSAPIIHCEGEDSV---------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYG 569 (669)
Q Consensus 517 ~~lh~~~~~~~i~h~d~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G 569 (669)
+|+|. .+|+|||+|+.. ......||+.|+|||++.+..++.++||||||
T Consensus 157 ~~lH~----~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlG 232 (496)
T PTZ00283 157 HHVHS----KHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLG 232 (496)
T ss_pred HHHHh----CCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHH
Confidence 99994 589999999530 01123589999999999988899999999999
Q ss_pred HHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 570 VLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 570 vil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
|++|||++|+.||.... ....+......... . .+......+.+++.+||+.||.+||++.+
T Consensus 233 vilyeLltG~~Pf~~~~-----~~~~~~~~~~~~~~-~-------------~~~~~~~~l~~li~~~L~~dP~~RPs~~e 293 (496)
T PTZ00283 233 VLLYELLTLKRPFDGEN-----MEEVMHKTLAGRYD-P-------------LPPSISPEMQEIVTALLSSDPKRRPSSSK 293 (496)
T ss_pred HHHHHHHHCCCCCCCCC-----HHHHHHHHhcCCCC-C-------------CCCCCCHHHHHHHHHHcccChhhCcCHHH
Confidence 99999999999986521 22222221111100 0 01223456789999999999999999999
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
+++
T Consensus 294 ll~ 296 (496)
T PTZ00283 294 LLN 296 (496)
T ss_pred HHh
Confidence 876
No 228
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.87 E-value=1.6e-22 Score=203.53 Aligned_cols=183 Identities=19% Similarity=0.219 Sum_probs=135.0
Q ss_pred cCchhhhhhccc-cccccceeccccccc------cccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhh
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSNP------DFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYL 519 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~~------~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~l 519 (669)
.+..|+..+..+ +|+|++++++.+... ...+++|||+++|+|.+++... ...+++.....++.|+++|++||
T Consensus 48 ~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~L 127 (272)
T cd06637 48 EIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 127 (272)
T ss_pred HHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 455678888887 699999999988642 3568999999999999999863 34688999999999999999999
Q ss_pred hcCCCCCCeeecCCCCcc-------------------------cccccccccccCcccccc-----CCCcCccccchhhH
Q 040540 520 RHGHSSAPIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGS-----EGIVSAKCDVYSYG 569 (669)
Q Consensus 520 h~~~~~~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G 569 (669)
|+ .+++|+|+++.. ......|+..|+|||++. +..++.++||||||
T Consensus 128 H~----~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG 203 (272)
T cd06637 128 HQ----HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG 203 (272)
T ss_pred HH----CCCccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHH
Confidence 95 479999988320 011234788999999875 34578899999999
Q ss_pred HHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 570 VLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 570 vil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
|++|||++|+.||..... ........ ........ ....+..+.+++.+||..+|.+|||+.|
T Consensus 204 v~l~el~~g~~p~~~~~~----~~~~~~~~-~~~~~~~~-------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ 265 (272)
T cd06637 204 ITAIEMAEGAPPLCDMHP----MRALFLIP-RNPAPRLK-------------SKKWSKKFQSFIESCLVKNHSQRPTTEQ 265 (272)
T ss_pred HHHHHHHhCCCCccccCH----HHHHHHHh-cCCCCCCC-------------CCCcCHHHHHHHHHHcCCChhhCCCHHH
Confidence 999999999999865321 11111000 00000000 1122345789999999999999999999
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
+++
T Consensus 266 il~ 268 (272)
T cd06637 266 LMK 268 (272)
T ss_pred Hhh
Confidence 874
No 229
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.87 E-value=8.2e-22 Score=199.99 Aligned_cols=191 Identities=20% Similarity=0.211 Sum_probs=141.6
Q ss_pred ccCchhhhhhccccccccceecccccc--ccccceeeccCCCCChHHhhhc---CCCccCHHHHHHHHHhHHhhhhhhhc
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSN--PDFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
..+.+|++.++.++|+|+++++++|.. ....++||||+++++|.+++.. ....+++.....++.++++|+.|+|.
T Consensus 44 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~ 123 (287)
T cd06621 44 KQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS 123 (287)
T ss_pred HHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 356778999999999999999998754 3457899999999999988753 34457888899999999999999995
Q ss_pred CCCCCCeeecCCCCcc-----------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhC
Q 040540 522 GHSSAPIIHCEGEDSV-----------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~-----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg 578 (669)
.+++|+|+++.. ......++..|+|||...+..++.++||||+||++|||++|
T Consensus 124 ----~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g 199 (287)
T cd06621 124 ----RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQN 199 (287)
T ss_pred ----CCcccCCCCHHHEEEecCCeEEEeeccccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhC
Confidence 479999987320 01112367889999999888899999999999999999999
Q ss_pred CCCCCcCCC---CCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 579 KRPTDEMFT---GEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 579 ~~p~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+.||..... ....+..++.............. ....+..+.+++.+||..+|++||||.|+++
T Consensus 200 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 200 RFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGN-----------GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCCCCcccCCCCChHHHHHHHhcCCchhhccCCCC-----------CCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 999975421 11223333322111111100000 0123456789999999999999999999987
No 230
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.87 E-value=3.8e-22 Score=198.90 Aligned_cols=182 Identities=18% Similarity=0.247 Sum_probs=141.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|+..++.++|+|++++++.+...+..++|+||+++++|.+++... ...+++.+...++.+++.|+.|+|. .
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~----~ 120 (256)
T cd08218 45 ESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD----R 120 (256)
T ss_pred HHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 5667889999999999999999998888999999999999999999753 3357888999999999999999994 4
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+++|+|+++.. ......|+..|+|||+..+..++.++|||||||+++||+||+.|
T Consensus 121 ~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~ 200 (256)
T cd08218 121 KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHA 200 (256)
T ss_pred CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCC
Confidence 79999988431 00112478889999999888899999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|.... ....+......... . .+......+.+++.+||+.+|++||+|.||++
T Consensus 201 ~~~~~-----~~~~~~~~~~~~~~-----~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 201 FEAGN-----MKNLVLKIIRGSYP-----P---------VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred ccCCC-----HHHHHHHHhcCCCC-----C---------CcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 86421 11111111111000 0 01223456789999999999999999999986
No 231
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.87 E-value=4.9e-22 Score=200.75 Aligned_cols=185 Identities=21% Similarity=0.217 Sum_probs=139.0
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+.++.+++|+|++++++.+..+...++||||++++++..+. .+++.....++.+++.|++|+|+ .
T Consensus 44 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~----~ 114 (279)
T cd06619 44 KQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWS----L 114 (279)
T ss_pred HHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 34667889999999999999999999888899999999999997653 36778888999999999999995 4
Q ss_pred CeeecCCCCcc-----------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 527 PIIHCEGEDSV-----------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 527 ~i~h~d~~~~~-----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
+++|+|+++.. ......||..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 115 ~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~ 194 (279)
T cd06619 115 KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYP 194 (279)
T ss_pred CEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCch
Confidence 89999998431 1122358899999999988889999999999999999999999996
Q ss_pred cCCCCCcc--HHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 584 EMFTGEMS--LRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 584 ~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
........ ...+........ .+.+. ......++.+++.+|++.+|++||+++|+++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--------~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 195 QIQKNQGSLMPLQLLQCIVDED-----PPVLP--------VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred hhcccccccchHHHHHHHhccC-----CCCCC--------CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 53221110 111111110000 00000 11123457899999999999999999999764
No 232
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.87 E-value=1.2e-22 Score=214.32 Aligned_cols=185 Identities=19% Similarity=0.245 Sum_probs=138.5
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|..++..++|+|++++++.+......++||||+++|+|.+++.+. ..+++.....++.+++.|++|||. .
T Consensus 46 ~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~----~ 120 (381)
T cd05626 46 AHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHK----M 120 (381)
T ss_pred HHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 34667889999999999999999999999999999999999999999754 457888888899999999999994 4
Q ss_pred CeeecCCCCcc--------------c------------------------------------------------------
Q 040540 527 PIIHCEGEDSV--------------T------------------------------------------------------ 538 (669)
Q Consensus 527 ~i~h~d~~~~~--------------~------------------------------------------------------ 538 (669)
+|+|||+|+.. .
T Consensus 121 givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (381)
T cd05626 121 GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQH 200 (381)
T ss_pred CeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccc
Confidence 89999998430 0
Q ss_pred ----ccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccc
Q 040540 539 ----QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVR 614 (669)
Q Consensus 539 ----~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 614 (669)
..+.+||+.|+|||++.+..++.++|||||||++|||+||+.||....... ....+.. ..... .
T Consensus 201 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~i~~-~~~~~------~--- 268 (381)
T cd05626 201 QRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTE--TQLKVIN-WENTL------H--- 268 (381)
T ss_pred cccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHH--HHHHHHc-ccccc------C---
Confidence 012358999999999988889999999999999999999999997532111 1110000 00000 0
Q ss_pred hhhhhhhhHHHHHHHHHHHhh--cccCCCCCCCCHHHHHH
Q 040540 615 EEQAFSAKMDCLLSIMDLALD--CCMESPDKRMHMTDAAA 652 (669)
Q Consensus 615 ~~~~~~~~~~~~~~~~~l~~~--c~~~~P~~Rps~~~v~~ 652 (669)
.+.......++.+++.+ |+..+|..||++.|+++
T Consensus 269 ----~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 269 ----IPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred ----CCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 00011223456677776 66677777999999976
No 233
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.87 E-value=8.6e-23 Score=213.51 Aligned_cols=183 Identities=19% Similarity=0.271 Sum_probs=141.3
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|...+..++|+|++++++.+......++||||+++|+|.+++.+. ..+++.....++.++++||+|||. .+
T Consensus 47 ~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~----~g 121 (350)
T cd05573 47 HVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHK----LG 121 (350)
T ss_pred HHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 4667888999999999999999999889999999999999999999864 568888999999999999999994 58
Q ss_pred eeecCCCCcc-----------------------c-------------------------------ccccccccccCcccc
Q 040540 528 IIHCEGEDSV-----------------------T-------------------------------QTTTMATIGYMAPEY 553 (669)
Q Consensus 528 i~h~d~~~~~-----------------------~-------------------------------~~~~~gt~~y~aPE~ 553 (669)
++|+|+|+.. . .....||+.|+|||+
T Consensus 122 iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~ 201 (350)
T cd05573 122 FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEV 201 (350)
T ss_pred eeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHH
Confidence 9999998320 0 112358999999999
Q ss_pred ccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHH
Q 040540 554 GSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLA 633 (669)
Q Consensus 554 ~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 633 (669)
+.+..++.++|||||||++|||++|+.||...... ..+ ....... .... .+........+.+++
T Consensus 202 ~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~----~~~-~~i~~~~-~~~~----------~p~~~~~~~~~~~li 265 (350)
T cd05573 202 LRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ----ETY-NKIINWK-ESLR----------FPPDPPVSPEAIDLI 265 (350)
T ss_pred HcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH----HHH-HHHhccC-Cccc----------CCCCCCCCHHHHHHH
Confidence 99889999999999999999999999999753211 111 1100000 0000 000111345678999
Q ss_pred hhcccCCCCCCCC-HHHHHH
Q 040540 634 LDCCMESPDKRMH-MTDAAA 652 (669)
Q Consensus 634 ~~c~~~~P~~Rps-~~~v~~ 652 (669)
.+|+. ||.+||+ ++|+++
T Consensus 266 ~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 266 CRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred HHHcc-ChhhcCCCHHHHhc
Confidence 99997 9999999 999986
No 234
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.87 E-value=3.3e-22 Score=200.39 Aligned_cols=184 Identities=19% Similarity=0.263 Sum_probs=141.1
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+..++.++|+|+++++++|......+++|||+++++|.+++.+. ..+++.....++.++++|++|+|. .
T Consensus 47 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~----~ 121 (265)
T cd06631 47 EKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHN----N 121 (265)
T ss_pred HHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 34667899999999999999999999888999999999999999999754 457888888999999999999995 4
Q ss_pred CeeecCCCCcc-------------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHH
Q 040540 527 PIIHCEGEDSV-------------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMET 575 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el 575 (669)
+++|+|+++.. ......|+..|+|||+..+..++.++|||||||++|||
T Consensus 122 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l 201 (265)
T cd06631 122 CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEM 201 (265)
T ss_pred CcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHH
Confidence 69999988431 00112378889999999888899999999999999999
Q ss_pred HhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 576 FTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 576 ~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
++|+.||....... ........ ... .+.+ +......+.+++.+||..+|++||++.|+++
T Consensus 202 ~~g~~p~~~~~~~~-~~~~~~~~---~~~----~~~~---------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 202 ATGKPPLASMDRLA-AMFYIGAH---RGL----MPRL---------PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred HhCCCccccCChHH-HHHHhhhc---cCC----CCCC---------CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 99999997532111 11110000 000 0111 1123445789999999999999999999874
No 235
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.87 E-value=1.2e-22 Score=213.16 Aligned_cols=183 Identities=16% Similarity=0.221 Sum_probs=137.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.++..++|||++++++++......++||||+++|+|.+++... .++......++.++++||+|||. .+
T Consensus 89 ~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~----~~ 162 (370)
T cd05596 89 FFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHS----MG 162 (370)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 3567888999999999999999999889999999999999999999753 46777788899999999999995 47
Q ss_pred eeecCCCCcc--------------------------cccccccccccCccccccCC----CcCccccchhhHHHHHHHHh
Q 040540 528 IIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGSEG----IVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 528 i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~s~Gvil~el~t 577 (669)
|+|||+|+.. ......||+.|+|||++... .++.++|||||||++|||++
T Consensus 163 ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyellt 242 (370)
T cd05596 163 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 242 (370)
T ss_pred eeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHh
Confidence 9999998430 01123589999999987643 47899999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCC--CCCHHHHHH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDK--RMHMTDAAA 652 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~--Rps~~~v~~ 652 (669)
|+.||..... ......+.... . .. .++.....+..+.+++.+|++.+|.+ ||++.|+++
T Consensus 243 G~~Pf~~~~~--~~~~~~i~~~~-~---~~----------~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 243 GDTPFYADSL--VGTYSKIMDHK-N---SL----------TFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCCCcCCCCH--HHHHHHHHcCC-C---cC----------CCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 9999965221 10111110000 0 00 00111123456789999999999987 999999965
No 236
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.87 E-value=4.2e-22 Score=198.65 Aligned_cols=182 Identities=19% Similarity=0.256 Sum_probs=141.6
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|+..++.++|+|++++++.+......++++||+++++|.+++.+. +..+++..+..++.++++|+.|||. .
T Consensus 45 ~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~----~ 120 (257)
T cd08225 45 ASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHD----R 120 (257)
T ss_pred HHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 4557889999999999999999999888999999999999999999753 3357899999999999999999995 4
Q ss_pred CeeecCCCCcc--------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCC
Q 040540 527 PIIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 527 ~i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
+++|+|+++.. ......|++.|+|||+..+..++.++|||||||++|||++|+.
T Consensus 121 ~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~ 200 (257)
T cd08225 121 KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKH 200 (257)
T ss_pred CcccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 79999988431 0011237788999999888889999999999999999999999
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
||.... ..+++........... .......+.+++.+||..+|++|||+.|+++
T Consensus 201 p~~~~~-----~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 201 PFEGNN-----LHQLVLKICQGYFAPI--------------SPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCCcc-----HHHHHHHHhcccCCCC--------------CCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 986421 2222222221111110 1112345789999999999999999999975
No 237
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.87 E-value=3.6e-22 Score=200.37 Aligned_cols=182 Identities=20% Similarity=0.308 Sum_probs=141.0
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+.++..++|+|++++++++......+++|||+++++|.+++... ..+++.....++.+++.|++|||. .
T Consensus 51 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~----~ 125 (267)
T cd06628 51 DALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHN----R 125 (267)
T ss_pred HHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHh----c
Confidence 35667889999999999999999998888999999999999999999754 457888889999999999999995 4
Q ss_pred CeeecCCCCcc--------------------c-----------ccccccccccCccccccCCCcCccccchhhHHHHHHH
Q 040540 527 PIIHCEGEDSV--------------------T-----------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMET 575 (669)
Q Consensus 527 ~i~h~d~~~~~--------------------~-----------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el 575 (669)
+++|+|+++.. . .....|+..|+|||.+.+..++.++|||||||++|||
T Consensus 126 ~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l 205 (267)
T cd06628 126 GIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEM 205 (267)
T ss_pred CcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHH
Confidence 79999988430 0 0012367889999999888899999999999999999
Q ss_pred HhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 576 FTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 576 ~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
++|+.||..... ........ . ...+.+ +......+.+++.+||+.||.+||++.||++
T Consensus 206 ~~g~~p~~~~~~----~~~~~~~~--~----~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 206 LTGKHPFPDCTQ----LQAIFKIG--E----NASPEI---------PSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred hhCCCCCCCccH----HHHHHHHh--c----cCCCcC---------CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 999999975321 11100000 0 000111 1223456789999999999999999999875
No 238
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.87 E-value=1.7e-22 Score=208.55 Aligned_cols=169 Identities=22% Similarity=0.197 Sum_probs=131.1
Q ss_pred hhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCC
Q 040540 455 VLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGE 534 (669)
Q Consensus 455 ~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~ 534 (669)
.+..++|||++++++.+...+..++||||+++|+|.+++... ..+++.....++.|+++||+|||. .+++|||+|
T Consensus 49 ~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~----~givH~dik 123 (323)
T cd05575 49 LLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHS----LNIIYRDLK 123 (323)
T ss_pred HHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH----CCeEeCCCC
Confidence 456789999999999998888899999999999999999753 457888888999999999999995 479999998
Q ss_pred Ccc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCC
Q 040540 535 DSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGE 589 (669)
Q Consensus 535 ~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~ 589 (669)
+.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 124 p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~--- 200 (323)
T cd05575 124 PENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD--- 200 (323)
T ss_pred HHHeEECCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC---
Confidence 430 0112348999999999988889999999999999999999999986532
Q ss_pred ccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH
Q 040540 590 MSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMT 648 (669)
Q Consensus 590 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~ 648 (669)
..+.......... .+ +......+.+++.+|++.||.+||++.
T Consensus 201 --~~~~~~~i~~~~~--~~-------------~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 201 --TAEMYDNILNKPL--RL-------------KPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred --HHHHHHHHHcCCC--CC-------------CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 1111111111100 00 111234578999999999999999985
No 239
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.87 E-value=4.5e-23 Score=213.62 Aligned_cols=184 Identities=17% Similarity=0.235 Sum_probs=139.0
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|..++...+|++++++++.+......++||||+++|+|.+++.+....+++.....++.|+++||.|||. .+
T Consensus 47 ~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~----~~ 122 (330)
T cd05601 47 FFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQ----MG 122 (330)
T ss_pred HHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 45678888889999999999999988888999999999999999998765678999999999999999999994 47
Q ss_pred eeecCCCCcc--------------------------cccccccccccCcccccc------CCCcCccccchhhHHHHHHH
Q 040540 528 IIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGS------EGIVSAKCDVYSYGVLLMET 575 (669)
Q Consensus 528 i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~s~Gvil~el 575 (669)
|+|||+|+.. ......||+.|+|||++. ...++.++|||||||++|||
T Consensus 123 i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el 202 (330)
T cd05601 123 YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEM 202 (330)
T ss_pred eEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeee
Confidence 9999998430 001125899999999886 45578999999999999999
Q ss_pred HhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 576 FTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 576 ~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
++|+.||...... ......... .... .++........+.+++.+|+. +|++||++.++++
T Consensus 203 ~~g~~Pf~~~~~~-----~~~~~i~~~--~~~~---------~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 203 IYGRSPFHEGTSA-----KTYNNIMNF--QRFL---------KFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred ccCCCCCCCCCHH-----HHHHHHHcC--CCcc---------CCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 9999999653211 111111000 0000 000111234557889999997 9999999999874
No 240
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.87 E-value=4.7e-22 Score=201.43 Aligned_cols=180 Identities=18% Similarity=0.193 Sum_probs=137.2
Q ss_pred CchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
+..|+.++..++|++++.+.+.+...+..+++|||+++|+|.+++... ...+++.....++.|+++|+.|||. .+
T Consensus 47 ~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~----~~ 122 (285)
T cd05632 47 ALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHR----EN 122 (285)
T ss_pred HHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 456889999999999999999988888899999999999999988753 3368999999999999999999994 47
Q ss_pred eeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 528 IIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 528 i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
|+|+|+++.. ......|+..|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 123 iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~ 202 (285)
T cd05632 123 TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFR 202 (285)
T ss_pred eeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCC
Confidence 9999998420 0112357899999999988889999999999999999999999997
Q ss_pred cCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH
Q 040540 584 EMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMT 648 (669)
Q Consensus 584 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~ 648 (669)
...... ...-+......... .. +......+.+++.+|++.||++||++.
T Consensus 203 ~~~~~~--~~~~~~~~~~~~~~-~~-------------~~~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05632 203 GRKEKV--KREEVDRRVLETEE-VY-------------SAKFSEEAKSICKMLLTKDPKQRLGCQ 251 (285)
T ss_pred CCCHHH--HHHHHHHhhhcccc-cc-------------CccCCHHHHHHHHHHccCCHhHcCCCc
Confidence 532111 11111111111000 00 112234567999999999999999943
No 241
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.87 E-value=5.1e-22 Score=203.01 Aligned_cols=196 Identities=13% Similarity=0.151 Sum_probs=140.6
Q ss_pred CchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
+..|+..+..++|+|++++++++..+...++||||++ ++|.+++......+++.....++.++++|++|||. .++
T Consensus 51 ~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~----~~i 125 (301)
T cd07873 51 AIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHR----RKV 125 (301)
T ss_pred HHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh----CCe
Confidence 4568899999999999999999998889999999998 69999987665668888999999999999999994 589
Q ss_pred eecCCCCcc-------------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCCCC
Q 040540 529 IHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 529 ~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+|+|+++.. ......+++.|+|||++.+ ..++.++|||||||++|||+||+.||
T Consensus 126 ~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f 205 (301)
T cd07873 126 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLF 205 (301)
T ss_pred eCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCC
Confidence 999998430 0112246889999998765 34788999999999999999999998
Q ss_pred CcCCCCCccHHHHHHHhCCC----Ccccccc---------ccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPH----RLSEVVD---------TNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~----~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
..... ......+...... .+...++ +....... ..........+.+++.+|++.||.+|||+.|
T Consensus 206 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~ml~~dp~~R~t~~e 282 (301)
T cd07873 206 PGSTV--EEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCL-HNHAPRLDSDGAELLSKLLQFEGRKRISAEE 282 (301)
T ss_pred CCCCH--HHHHHHHHHHcCCCChhhchhhhccccccccccCccccccH-HhhcCCCCHHHHHHHHHHhcCCcccCcCHHH
Confidence 65321 1111111111111 0111110 00000000 0001123456789999999999999999999
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
+++
T Consensus 283 il~ 285 (301)
T cd07873 283 AMK 285 (301)
T ss_pred Hhc
Confidence 986
No 242
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.87 E-value=2.3e-22 Score=208.45 Aligned_cols=184 Identities=20% Similarity=0.162 Sum_probs=136.6
Q ss_pred cCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|..++..+ +|++++++++.+......++||||+++|+|.+++... ..+++.....++.+++.||+|||. .
T Consensus 50 ~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~----~ 124 (332)
T cd05614 50 HTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLHK----L 124 (332)
T ss_pred HHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 345678888888 4899999999888888899999999999999999753 457888899999999999999995 4
Q ss_pred CeeecCCCCcc--------------------------cccccccccccCccccccCC-CcCccccchhhHHHHHHHHhCC
Q 040540 527 PIIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 527 ~i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~ 579 (669)
+++|||+|+.. ......||+.|||||++.+. .++.++|||||||++|||+||+
T Consensus 125 ~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~ 204 (332)
T cd05614 125 GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGA 204 (332)
T ss_pred CcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCC
Confidence 79999998430 01123589999999998764 4788999999999999999999
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM-----HMTDAAA 652 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp-----s~~~v~~ 652 (669)
.||....... ............ ++.+ +......+.+++.+|++.||++|| +++++++
T Consensus 205 ~pf~~~~~~~-~~~~~~~~~~~~------~~~~---------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 205 SPFTLEGERN-TQSEVSRRILKC------DPPF---------PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCCCCCCCCC-CHHHHHHHHhcC------CCCC---------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 9996432111 111111111100 0111 112234568999999999999999 5666654
No 243
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.87 E-value=2.8e-22 Score=204.35 Aligned_cols=182 Identities=18% Similarity=0.201 Sum_probs=140.3
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..++.++|+|++++++.+......++||||+++++|.+++.+ ..+++..+..++.++++|+.|||. .+
T Consensus 62 ~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~----~~ 135 (297)
T cd06656 62 LIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHS----NQ 135 (297)
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 456788889999999999999999988899999999999999999964 347888999999999999999995 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|+|+++.. ......|++.|+|||...+..++.++|||||||++|||+||+.||
T Consensus 136 i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf 215 (297)
T cd06656 136 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY 215 (297)
T ss_pred cccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 9999988430 011224788999999998888899999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
............+ .... +. ...+......+.+++.+||..+|++||+++++++
T Consensus 216 ~~~~~~~~~~~~~-~~~~---------~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 216 LNENPLRALYLIA-TNGT---------PE-------LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCCCcchheeeec-cCCC---------CC-------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 6522111000000 0000 00 0012233445789999999999999999999987
No 244
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.87 E-value=2.1e-22 Score=208.06 Aligned_cols=174 Identities=22% Similarity=0.204 Sum_probs=132.8
Q ss_pred hhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCC
Q 040540 455 VLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGE 534 (669)
Q Consensus 455 ~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~ 534 (669)
.+..++|+|++++++.+...+..++||||+++|+|.+++... ..+.......++.|+++||+|||. .+++|||+|
T Consensus 49 ~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~----~giiHrDlk 123 (325)
T cd05602 49 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHS----LNIVYRDLK 123 (325)
T ss_pred HHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH----CCeEecCCC
Confidence 456789999999999998888999999999999999999754 346777777899999999999994 479999998
Q ss_pred Ccc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCC
Q 040540 535 DSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGE 589 (669)
Q Consensus 535 ~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~ 589 (669)
+.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus 124 p~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-- 201 (325)
T cd05602 124 PENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-- 201 (325)
T ss_pred HHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH--
Confidence 430 01123589999999999988899999999999999999999999975321
Q ss_pred ccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 590 MSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 590 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
..+...+... +.. . +......+.+++.+|++.+|.+||++.+.+..
T Consensus 202 ~~~~~~i~~~-~~~----~-------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 202 AEMYDNILNK-PLQ----L-------------KPNITNSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred HHHHHHHHhC-CcC----C-------------CCCCCHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 1111111111 000 0 11223457899999999999999998754433
No 245
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.87 E-value=6.1e-22 Score=200.54 Aligned_cols=184 Identities=18% Similarity=0.206 Sum_probs=140.4
Q ss_pred CchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
+..|+.++..++|++++.+++.+...+..++||||+++|+|.+++... ...+++..+..++.+++.|+.|||. .+
T Consensus 47 ~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~----~~ 122 (285)
T cd05630 47 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ----ER 122 (285)
T ss_pred HHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 456888999999999999999998888999999999999999998643 2358889999999999999999994 58
Q ss_pred eeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 528 IIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 528 i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
++|+|+++.. ......||..|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 123 iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~ 202 (285)
T cd05630 123 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 202 (285)
T ss_pred EEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCC
Confidence 9999998431 0112358899999999988889999999999999999999999997
Q ss_pred cCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC-----HHHHHH
Q 040540 584 EMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH-----MTDAAA 652 (669)
Q Consensus 584 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps-----~~~v~~ 652 (669)
...... .. +-..... .... .. .+......+.+++.+||+.||++||| +.|+++
T Consensus 203 ~~~~~~-~~-~~~~~~~-~~~~----~~---------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 203 QRKKKI-KR-EEVERLV-KEVQ----EE---------YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred CCCccc-hH-HHHHhhh-hhhh----hh---------cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 532111 00 0000000 0000 00 01223345789999999999999999 778876
No 246
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.87 E-value=4.2e-22 Score=202.63 Aligned_cols=183 Identities=20% Similarity=0.224 Sum_probs=140.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..++.++|||++++++.+...+..++|+||+++++|.+++.+. .+++.++..++.++++|+.|||. .+
T Consensus 62 ~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~----~g 135 (293)
T cd06647 62 LIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS----NQ 135 (293)
T ss_pred HHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 4567888899999999999999998888999999999999999999753 47888999999999999999994 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|+|+++.. ......|++.|+|||......++.++|||||||++||+++|+.||
T Consensus 136 i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf 215 (293)
T cd06647 136 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY 215 (293)
T ss_pred EeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 9999988431 011124778899999988888899999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
........ +...... . .+.+..+......+.+++.+||+.+|++||++.+++..
T Consensus 216 ~~~~~~~~-~~~~~~~---~-------------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 216 LNENPLRA-LYLIATN---G-------------TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCChhhh-eeehhcC---C-------------CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 65321110 0000000 0 00011122334567899999999999999999999874
No 247
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.86 E-value=6.1e-22 Score=203.19 Aligned_cols=204 Identities=13% Similarity=0.198 Sum_probs=142.9
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|+|++++++++..+...++||||++ +++.+++...+..+++.....++.++++|++|||. .+
T Consensus 50 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~----~~ 124 (309)
T cd07872 50 TAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD-KDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHR----RK 124 (309)
T ss_pred hHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 34568899999999999999999998889999999998 58999887666668888999999999999999994 48
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
|+|||+++.. ......||+.|+|||++.+ ..++.++|||||||++|||+||+.|
T Consensus 125 ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~p 204 (309)
T cd07872 125 VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPL 204 (309)
T ss_pred eecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 9999998430 0112347889999998765 4588999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCC----Cccccccc------cccc--hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPH----RLSEVVDT------NLVR--EEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
|....... .+.... ..... .+..+... .... ..............+.+++.+|++.||.+|||+.|
T Consensus 205 f~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e 282 (309)
T cd07872 205 FPGSTVED-ELHLIF-RLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEE 282 (309)
T ss_pred CCCCChHH-HHHHHH-HHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHH
Confidence 96532111 111111 10000 00000000 0000 00000011123456789999999999999999999
Q ss_pred HHH--HHHHhH
Q 040540 650 AAA--KLKKIK 658 (669)
Q Consensus 650 v~~--~l~~~~ 658 (669)
+++ .++.+.
T Consensus 283 ~l~h~~~~~~~ 293 (309)
T cd07872 283 AMKHAYFRSLG 293 (309)
T ss_pred HhcChhhhhcc
Confidence 987 344443
No 248
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.86 E-value=1.3e-22 Score=209.60 Aligned_cols=174 Identities=21% Similarity=0.198 Sum_probs=133.1
Q ss_pred hhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCC
Q 040540 455 VLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGE 534 (669)
Q Consensus 455 ~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~ 534 (669)
+++.++|||++++++.+...+..++||||+++|+|..++.. ...+++.....++.|+++|++|||. .+++|||+|
T Consensus 49 ~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~----~givH~Dlk 123 (325)
T cd05604 49 LLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHS----INIVYRDLK 123 (325)
T ss_pred HHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH----CCeeecCCC
Confidence 45678999999999999888899999999999999999874 3468889999999999999999994 479999998
Q ss_pred Ccc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCC
Q 040540 535 DSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGE 589 (669)
Q Consensus 535 ~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~ 589 (669)
+.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .
T Consensus 124 p~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~--~ 201 (325)
T cd05604 124 PENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD--V 201 (325)
T ss_pred HHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC--H
Confidence 420 0112348999999999998889999999999999999999999986522 1
Q ss_pred ccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 590 MSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 590 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
..+.+ ....... .+. ......+.+++.+|++.+|.+||++++.++.
T Consensus 202 ~~~~~---~~~~~~~--~~~-------------~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 202 AEMYD---NILHKPL--VLR-------------PGASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred HHHHH---HHHcCCc--cCC-------------CCCCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 11111 1111000 000 1123456789999999999999988644433
No 249
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.86 E-value=3.8e-22 Score=205.16 Aligned_cols=184 Identities=20% Similarity=0.241 Sum_probs=151.0
Q ss_pred ccCchhhhhhcccc-ccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVR-HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
.....|+.++..+. |||+|.+.+.+......++|||++.+|.|++.+... ..++.+...++.+++.|+.|+|.
T Consensus 80 ~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~---- 153 (382)
T KOG0032|consen 80 EDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHS---- 153 (382)
T ss_pred HHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHh----
Confidence 46778999999998 999999999999999999999999999999999865 38899999999999999999995
Q ss_pred CCeeecCCCCc----------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 526 APIIHCEGEDS----------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 526 ~~i~h~d~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
.+++|||+|+. ......+||+.|+|||+.....|+.++||||.||++|.|++
T Consensus 154 ~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~ 233 (382)
T KOG0032|consen 154 LGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLS 233 (382)
T ss_pred CCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhh
Confidence 58999999843 01223469999999999999999999999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|..||........ .....+.. + . ...+.++.....+.+++.+|+..||.+|+|+.++++
T Consensus 234 G~~PF~~~~~~~~-~~~i~~~~----~------~-----f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 234 GVPPFWGETEFEI-FLAILRGD----F------D-----FTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCCCCcCCChhHH-HHHHHcCC----C------C-----CCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 9999976432221 11111100 0 0 111236677888999999999999999999999987
No 250
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.86 E-value=4e-22 Score=202.26 Aligned_cols=185 Identities=21% Similarity=0.258 Sum_probs=134.4
Q ss_pred cCchhhhhhccc-cccccceeccccc-----cccccceeeccCCCCChHHhhhc---CCCccCHHHHHHHHHhHHhhhhh
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCS-----NPDFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEY 518 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~-----~~~~~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~ 518 (669)
.+..|+..+..+ +|+|++++++++. .....++||||+++++|.++++. ....+++.....++.++++|+.|
T Consensus 60 ~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 139 (286)
T cd06638 60 EIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQH 139 (286)
T ss_pred HHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHH
Confidence 355688888888 6999999999873 34567899999999999998863 23457888888999999999999
Q ss_pred hhcCCCCCCeeecCCCCcc-------------------------cccccccccccCccccccC-----CCcCccccchhh
Q 040540 519 LRHGHSSAPIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSE-----GIVSAKCDVYSY 568 (669)
Q Consensus 519 lh~~~~~~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~ 568 (669)
||. .+++|+|+++.. ......|+..|+|||++.. ..++.++|||||
T Consensus 140 lH~----~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl 215 (286)
T cd06638 140 LHV----NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSL 215 (286)
T ss_pred HHh----CCccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhH
Confidence 994 479999988430 0112348889999998753 347889999999
Q ss_pred HHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH
Q 040540 569 GVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMT 648 (669)
Q Consensus 569 Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~ 648 (669)
||++|||++|+.|+..... .....+.. ........+ +......+.+++.+||+.||++||++.
T Consensus 216 Gvi~~el~~g~~p~~~~~~----~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~ 278 (286)
T cd06638 216 GITAIELGDGDPPLADLHP----MRALFKIP-RNPPPTLHQ------------PELWSNEFNDFIRKCLTKDYEKRPTVS 278 (286)
T ss_pred HHHHHHHhcCCCCCCCCch----hHHHhhcc-ccCCCcccC------------CCCcCHHHHHHHHHHccCCcccCCCHH
Confidence 9999999999999865321 11111100 000000001 111234578999999999999999999
Q ss_pred HHHHH
Q 040540 649 DAAAK 653 (669)
Q Consensus 649 ~v~~~ 653 (669)
|+++.
T Consensus 279 ell~~ 283 (286)
T cd06638 279 DLLQH 283 (286)
T ss_pred HHhhc
Confidence 99863
No 251
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.86 E-value=8.4e-22 Score=199.87 Aligned_cols=187 Identities=17% Similarity=0.197 Sum_probs=140.4
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC--CCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~--~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
..+..|+..+..++|+|++++++.+......++||||+++++|.+++... ...+++.....++.++++|+.|||+
T Consensus 44 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--- 120 (286)
T cd06622 44 NQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--- 120 (286)
T ss_pred HHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh---
Confidence 34667888999999999999999999899999999999999999998753 2368999999999999999999994
Q ss_pred CCCeeecCCCCcc-----------------------cccccccccccCccccccCC------CcCccccchhhHHHHHHH
Q 040540 525 SAPIIHCEGEDSV-----------------------TQTTTMATIGYMAPEYGSEG------IVSAKCDVYSYGVLLMET 575 (669)
Q Consensus 525 ~~~i~h~d~~~~~-----------------------~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~Gvil~el 575 (669)
..+++|+|+++.. ......|+..|+|||...+. .++.++|||||||++|||
T Consensus 121 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l 200 (286)
T cd06622 121 EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEM 200 (286)
T ss_pred cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHH
Confidence 2479999988431 01112477899999987543 357899999999999999
Q ss_pred HhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 576 FTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 576 ~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
++|+.||..... ......+........ +. .+.+...++.+++.+||+.+|++||++.++++
T Consensus 201 ~~g~~pf~~~~~--~~~~~~~~~~~~~~~-----~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 201 ALGRYPYPPETY--ANIFAQLSAIVDGDP-----PT---------LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred HhCCCCCCCcch--hhHHHHHHHHhhcCC-----CC---------CCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 999999865211 111111111000000 00 12234566789999999999999999999987
No 252
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.86 E-value=2.7e-22 Score=207.12 Aligned_cols=175 Identities=19% Similarity=0.139 Sum_probs=132.4
Q ss_pred cCchhhhhhcccccc-ccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVRHR-NLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|..++..+.|+ +++.+++++...+..++||||+++|+|.+++... ..+++.....++.|++.||+|||. .
T Consensus 46 ~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~----~ 120 (324)
T cd05587 46 CTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHS----K 120 (324)
T ss_pred HHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 345677777777665 5777888888888899999999999999999753 457888999999999999999995 4
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+|+|||+|+.. ......||+.|+|||++.+..++.++||||+||++|||+||+.|
T Consensus 121 ~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~p 200 (324)
T cd05587 121 GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPP 200 (324)
T ss_pred CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCC
Confidence 89999998531 01122489999999999988899999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
|..... ..+...+..... . .+......+.+++.+|+..||.+|++.
T Consensus 201 f~~~~~--~~~~~~i~~~~~---------~---------~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 201 FDGEDE--DELFQSIMEHNV---------S---------YPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCCCCH--HHHHHHHHcCCC---------C---------CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 975321 111111111100 0 011223457899999999999999976
No 253
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.86 E-value=1.1e-22 Score=213.69 Aligned_cols=183 Identities=17% Similarity=0.245 Sum_probs=139.1
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|..++..++|+|++++++.+..+...++||||+++|+|.+++... ..+++.....|+.|+++||+|||. .+
T Consensus 47 ~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~----~~ 121 (364)
T cd05599 47 HVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHK----LG 121 (364)
T ss_pred HHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 4567899999999999999999999999999999999999999999754 458889999999999999999995 47
Q ss_pred eeecCCCCccc---------------------------------------------------------------cccccc
Q 040540 528 IIHCEGEDSVT---------------------------------------------------------------QTTTMA 544 (669)
Q Consensus 528 i~h~d~~~~~~---------------------------------------------------------------~~~~~g 544 (669)
|+|||+|+... ....+|
T Consensus 122 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 201 (364)
T cd05599 122 YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVG 201 (364)
T ss_pred eEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhccccccccccc
Confidence 99999994300 001258
Q ss_pred ccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHH
Q 040540 545 TIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMD 624 (669)
Q Consensus 545 t~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (669)
|+.|+|||++....++.++|||||||++|||++|+.||..... ......+... .... .. +....
T Consensus 202 t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~--~~~~~~i~~~-~~~~--~~-----------~~~~~ 265 (364)
T cd05599 202 TPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNP--QETYRKIINW-KETL--QF-----------PDEVP 265 (364)
T ss_pred CccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCH--HHHHHHHHcC-CCcc--CC-----------CCCCC
Confidence 9999999999888899999999999999999999999975321 1111111100 0000 00 00111
Q ss_pred HHHHHHHHHhhcccCCCCCCCC---HHHHHH
Q 040540 625 CLLSIMDLALDCCMESPDKRMH---MTDAAA 652 (669)
Q Consensus 625 ~~~~~~~l~~~c~~~~P~~Rps---~~~v~~ 652 (669)
....+.+++.+|+. +|.+|++ +.|+++
T Consensus 266 ~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 266 LSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 23456788999986 9999997 888765
No 254
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.86 E-value=7.7e-22 Score=198.57 Aligned_cols=186 Identities=22% Similarity=0.325 Sum_probs=140.4
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|+|++++++++......++||||+++|+|.+++++. ..+++..+..++.+++.|+.|||+ .+
T Consensus 54 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~----~~ 128 (272)
T cd06629 54 ALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHS----KG 128 (272)
T ss_pred HHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhh----CC
Confidence 4667889999999999999999999889999999999999999999864 468888888999999999999995 47
Q ss_pred eeecCCCCcc---------------------------cccccccccccCccccccCCC--cCccccchhhHHHHHHHHhC
Q 040540 528 IIHCEGEDSV---------------------------TQTTTMATIGYMAPEYGSEGI--VSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 528 i~h~d~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~Gvil~el~tg 578 (669)
++|+|+++.. ......|+..|+|||...... ++.++||||||+++||+++|
T Consensus 129 i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g 208 (272)
T cd06629 129 ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAG 208 (272)
T ss_pred eeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhC
Confidence 9999988431 001123778899999887644 78999999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+.||..... ........ .......+.+.. ..+.+..+.+++.+||..+|++||+|.+|++
T Consensus 209 ~~p~~~~~~----~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 209 RRPWSDEEA----IAAMFKLG-NKRSAPPIPPDV---------SMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CCCCcCcch----HHHHHHhh-ccccCCcCCccc---------cccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 999854211 11111100 000011111111 1123456789999999999999999999875
No 255
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.86 E-value=2.8e-22 Score=206.80 Aligned_cols=169 Identities=20% Similarity=0.176 Sum_probs=130.1
Q ss_pred hhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCC
Q 040540 455 VLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGE 534 (669)
Q Consensus 455 ~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~ 534 (669)
.++.++|+|++++++.+...+..++||||+++|+|..++... ..+.+.....++.|+++||+|||. .+|+|+|+|
T Consensus 49 ~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~----~~ivH~Dlk 123 (321)
T cd05603 49 LLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHS----LNIIYRDLK 123 (321)
T ss_pred HHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CCeEeccCC
Confidence 467789999999999998888999999999999999988753 457778888899999999999994 479999998
Q ss_pred Ccc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCC
Q 040540 535 DSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGE 589 (669)
Q Consensus 535 ~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~ 589 (669)
+.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .
T Consensus 124 p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~ 201 (321)
T cd05603 124 PENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD--V 201 (321)
T ss_pred HHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC--H
Confidence 430 0112348999999999988889999999999999999999999996531 1
Q ss_pred ccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH
Q 040540 590 MSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMT 648 (669)
Q Consensus 590 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~ 648 (669)
..+...+. .... . .+......+.+++.+|++.||.+||++.
T Consensus 202 ~~~~~~i~---~~~~------~---------~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 202 SQMYDNIL---HKPL------Q---------LPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHh---cCCC------C---------CCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 11111111 1100 0 0112234578999999999999999764
No 256
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.86 E-value=6.8e-22 Score=200.25 Aligned_cols=182 Identities=19% Similarity=0.264 Sum_probs=140.6
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..++.+.|+|++++++++...+..++++||+++++|.+++.. ..+++.+...++.+++.|++|+|. .+
T Consensus 62 ~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~----~~ 135 (285)
T cd06648 62 LLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHA----QG 135 (285)
T ss_pred HHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 356788889999999999999998888889999999999999999976 457888999999999999999994 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|+|+++.. ......|+..|+|||...+..++.++|||||||++|||++|+.||
T Consensus 136 i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~ 215 (285)
T cd06648 136 VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPY 215 (285)
T ss_pred eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCC
Confidence 9999988431 011124788999999998888999999999999999999999998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
.... ......-+....+. .+. ........+.+++.+||..+|++||++.++++
T Consensus 216 ~~~~--~~~~~~~~~~~~~~--------~~~-------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 216 FNEP--PLQAMKRIRDNLPP--------KLK-------NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred cCCC--HHHHHHHHHhcCCC--------CCc-------ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 6421 11111111111110 000 01123356789999999999999999999985
No 257
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.86 E-value=8e-22 Score=202.98 Aligned_cols=183 Identities=23% Similarity=0.261 Sum_probs=140.3
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..++.++|+|++++++++......++||||++ |++.+.+......+++.++..++.+++.|+.|||. .+
T Consensus 71 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~----~~ 145 (317)
T cd06635 71 DIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS----HN 145 (317)
T ss_pred HHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 46678899999999999999999998888999999997 58888886656678999999999999999999995 47
Q ss_pred eeecCCCCcc---------------------cccccccccccCcccccc---CCCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 528 IIHCEGEDSV---------------------TQTTTMATIGYMAPEYGS---EGIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 528 i~h~d~~~~~---------------------~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
++|+|+++.. ......|+..|+|||++. .+.++.++|||||||++|||++|+.||.
T Consensus 146 i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~ 225 (317)
T cd06635 146 MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 225 (317)
T ss_pred cccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 9999988541 011224788999999873 4568899999999999999999999986
Q ss_pred cCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 584 EMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 584 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
.... ......+.....+. . ........+.+++.+||+.+|.+||++.+|++.
T Consensus 226 ~~~~-~~~~~~~~~~~~~~---------~--------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 226 NMNA-MSALYHIAQNESPT---------L--------QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred CccH-HHHHHHHHhccCCC---------C--------CCccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence 5311 11111111111100 0 011233457899999999999999999999874
No 258
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.86 E-value=8.5e-22 Score=199.83 Aligned_cols=199 Identities=17% Similarity=0.140 Sum_probs=140.0
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.+++.++|+|++++++.+......++||||++++.+..++.. ...+++..+..++.++++|++|||. .+
T Consensus 46 ~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~----~~ 120 (286)
T cd07847 46 IALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHK----HN 120 (286)
T ss_pred HHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 456789999999999999999999988889999999999888887764 3458999999999999999999995 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
++|+|+++.. ......++..|+|||++.+ ..++.++|||||||++|||+||+.|
T Consensus 121 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p 200 (286)
T cd07847 121 CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPL 200 (286)
T ss_pred ceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCC
Confidence 9999988431 0012246788999998866 4578999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHH---hCCC--------Cc-cccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 582 TDEMFTGEMSLRRWVKE---SLPH--------RL-SEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~---~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
|....... .+....+. ..+. .. .....+..................+.+++.+||+.+|++||++.|
T Consensus 201 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e 279 (286)
T cd07847 201 WPGKSDVD-QLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEE 279 (286)
T ss_pred CCCCChHH-HHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHH
Confidence 97533211 11111110 0000 00 000000000000000001123466889999999999999999999
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
++.
T Consensus 280 il~ 282 (286)
T cd07847 280 LLE 282 (286)
T ss_pred Hhc
Confidence 874
No 259
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.86 E-value=6.3e-22 Score=201.68 Aligned_cols=183 Identities=19% Similarity=0.251 Sum_probs=140.8
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|+|++++++.+...+..++++||+++++|.+++.. ..+++.....++.+++.|+.|||. .+
T Consensus 64 ~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~----~~ 137 (297)
T cd06659 64 LLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHS----QG 137 (297)
T ss_pred HHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 455788889999999999999999888899999999999999998864 347899999999999999999994 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|+|+++.. ......|+..|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 138 ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~ 217 (297)
T cd06659 138 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPY 217 (297)
T ss_pred eecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 9999988431 111234888999999998888999999999999999999999998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
.... .......+....+... . ........+.+++.+|++.+|++||+++++++.
T Consensus 218 ~~~~--~~~~~~~~~~~~~~~~--------~-------~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 218 FSDS--PVQAMKRLRDSPPPKL--------K-------NAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CCCC--HHHHHHHHhccCCCCc--------c-------ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 6422 1111111111111000 0 011123456789999999999999999999873
No 260
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.86 E-value=1.5e-22 Score=209.76 Aligned_cols=174 Identities=20% Similarity=0.214 Sum_probs=135.7
Q ss_pred cCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
....|-.++.-. +||.++.++++++..+..+.||||+.||++..+.+. ..+++....-|+..|+-||+|||+ +
T Consensus 414 ~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~--~~F~e~rarfyaAev~l~L~fLH~----~ 487 (694)
T KOG0694|consen 414 SLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHT--DVFSEPRARFYAAEVVLGLQFLHE----N 487 (694)
T ss_pred HHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEEEEec--ccccHHHHHHHHHHHHHHHHHHHh----c
Confidence 344455555444 699999999999999999999999999996666653 457888888899999999999995 5
Q ss_pred CeeecCCCCc-------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDS-------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~-------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+||+||+|-. ....+.+||+.|||||++.+..|+..+|+|||||++|||++|..|
T Consensus 488 ~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~P 567 (694)
T KOG0694|consen 488 GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESP 567 (694)
T ss_pred CceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCC
Confidence 8999999811 234556899999999999999999999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
|.+..+++ +.+ . +..+.. .+|...+.+++.++.+.+.++|.+|..+
T Consensus 568 F~gddEee--~Fd-----------s-----I~~d~~--~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 568 FPGDDEEE--VFD-----------S-----IVNDEV--RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCCCHHH--HHH-----------H-----HhcCCC--CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 97632221 111 1 111111 1233455677899999999999999866
No 261
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.86 E-value=7.9e-22 Score=197.54 Aligned_cols=186 Identities=18% Similarity=0.239 Sum_probs=142.2
Q ss_pred cCchhhhhhccccccccceecccccc--ccccceeeccCCCCChHHhhhcC---CCccCHHHHHHHHHhHHhhhhhhhcC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSN--PDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGSALEYLRHG 522 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ey~~~g~L~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~ 522 (669)
.+..|+..++.++|+|++++++.+.. ....+++|||+++++|.+++... ...+++.....++.++++|++|+|..
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~ 124 (265)
T cd08217 45 QLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNR 124 (265)
T ss_pred HHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 45668889999999999999987653 34568999999999999999753 45789999999999999999999943
Q ss_pred C-CCCCeeecCCCCcc-----------------------c--ccccccccccCccccccCCCcCccccchhhHHHHHHHH
Q 040540 523 H-SSAPIIHCEGEDSV-----------------------T--QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 523 ~-~~~~i~h~d~~~~~-----------------------~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~ 576 (669)
+ ...+++|+|+++.. . .....|+..|+|||+.....++.++||||||+++|||+
T Consensus 125 ~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~ 204 (265)
T cd08217 125 SDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELC 204 (265)
T ss_pred ccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHH
Confidence 1 14689999988430 0 11235789999999998888999999999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+|+.||.... ...+.+.+...... .+ +......+.+++.+|++.+|++||++.+|++
T Consensus 205 ~g~~p~~~~~--~~~~~~~~~~~~~~--------~~---------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 205 ALSPPFTARN--QLQLASKIKEGKFR--------RI---------PYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred HCCCcccCcC--HHHHHHHHhcCCCC--------CC---------ccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 9999987532 22222222221110 01 1123456789999999999999999999986
No 262
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.86 E-value=2.5e-22 Score=210.63 Aligned_cols=132 Identities=21% Similarity=0.266 Sum_probs=115.1
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|..++..++|++++++++.+......++||||+++|+|.+++.+. ..+++.....++.+++.||+|||. .+
T Consensus 47 ~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~----~g 121 (363)
T cd05628 47 HIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQ----LG 121 (363)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 4556888899999999999999999888999999999999999999754 468899999999999999999994 48
Q ss_pred eeecCCCCcc--------------c----------------------------------------------ccccccccc
Q 040540 528 IIHCEGEDSV--------------T----------------------------------------------QTTTMATIG 547 (669)
Q Consensus 528 i~h~d~~~~~--------------~----------------------------------------------~~~~~gt~~ 547 (669)
|+|||+|+.. . ....+||+.
T Consensus 122 ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~ 201 (363)
T cd05628 122 FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPD 201 (363)
T ss_pred eEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCcc
Confidence 9999998420 0 012368999
Q ss_pred cCccccccCCCcCccccchhhHHHHHHHHhCCCCCCc
Q 040540 548 YMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE 584 (669)
Q Consensus 548 y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 584 (669)
|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 202 Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 202 YIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 9999999888899999999999999999999999965
No 263
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.86 E-value=3.6e-22 Score=201.24 Aligned_cols=185 Identities=21% Similarity=0.248 Sum_probs=137.1
Q ss_pred ccCchhhhhhccc-cccccceecccccccc------ccceeeccCCCCChHHhhhcC---CCccCHHHHHHHHHhHHhhh
Q 040540 447 RSFDSECEVLRNV-RHRNLIKIISSCSNPD------FKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGSAL 516 (669)
Q Consensus 447 ~~~~~e~~~l~~l-~h~niv~l~~~~~~~~------~~~lv~ey~~~g~L~~~l~~~---~~~l~~~~~~~i~~~i~~~l 516 (669)
..+..|+.++.++ .|+|++++++.+.... ..++||||+++++|.+++... +..+++.....++.|+++|+
T Consensus 47 ~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al 126 (275)
T cd06608 47 EEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGL 126 (275)
T ss_pred HHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence 3567788888888 6999999999986543 478999999999999998652 35688999999999999999
Q ss_pred hhhhcCCCCCCeeecCCCCcc-------------------------cccccccccccCccccccC-----CCcCccccch
Q 040540 517 EYLRHGHSSAPIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSE-----GIVSAKCDVY 566 (669)
Q Consensus 517 ~~lh~~~~~~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~ 566 (669)
.|||. .+++|+|+++.. ......|+..|+|||++.. ..++.++|||
T Consensus 127 ~~lH~----~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~ 202 (275)
T cd06608 127 AYLHE----NKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVW 202 (275)
T ss_pred HHHhc----CCcccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHH
Confidence 99994 479999987420 0112247888999998753 3477899999
Q ss_pred hhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC
Q 040540 567 SYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH 646 (669)
Q Consensus 567 s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps 646 (669)
||||++|||+||+.||..... ...+..... .. .+.+ ..+......+.+++.+||..||++|||
T Consensus 203 slG~il~~l~~g~~p~~~~~~-~~~~~~~~~-~~--------~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rpt 265 (275)
T cd06608 203 SLGITAIELADGKPPLCDMHP-MRALFKIPR-NP--------PPTL-------KSPENWSKKFNDFISECLIKNYEQRPF 265 (275)
T ss_pred HhHHHHHHHHhCCCCccccch-HHHHHHhhc-cC--------CCCC-------CchhhcCHHHHHHHHHHhhcChhhCcC
Confidence 999999999999999864221 111111110 00 0011 112234557889999999999999999
Q ss_pred HHHHHH
Q 040540 647 MTDAAA 652 (669)
Q Consensus 647 ~~~v~~ 652 (669)
+.|+++
T Consensus 266 ~~~ll~ 271 (275)
T cd06608 266 MEELLE 271 (275)
T ss_pred HHHHhc
Confidence 999975
No 264
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.86 E-value=4.9e-22 Score=202.12 Aligned_cols=183 Identities=22% Similarity=0.263 Sum_probs=134.4
Q ss_pred Cchhhhhhccc-cccccceeccccccc-----cccceeeccCCCCChHHhhhc---CCCccCHHHHHHHHHhHHhhhhhh
Q 040540 449 FDSECEVLRNV-RHRNLIKIISSCSNP-----DFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYL 519 (669)
Q Consensus 449 ~~~e~~~l~~l-~h~niv~l~~~~~~~-----~~~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~l 519 (669)
+..|...+.++ +|+|++++++++... ...++||||+++|+|.++++. ....+++.....++.+++.|+.||
T Consensus 65 ~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l 144 (291)
T cd06639 65 IEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHL 144 (291)
T ss_pred HHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 44677778777 799999999988643 357899999999999998863 344688999999999999999999
Q ss_pred hcCCCCCCeeecCCCCcc-------------------------cccccccccccCccccccCC-----CcCccccchhhH
Q 040540 520 RHGHSSAPIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEG-----IVSAKCDVYSYG 569 (669)
Q Consensus 520 h~~~~~~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~s~G 569 (669)
|. .+++|+|+++.. ......|+..|+|||++... .++.++||||||
T Consensus 145 H~----~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG 220 (291)
T cd06639 145 HN----NRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLG 220 (291)
T ss_pred Hh----CCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHH
Confidence 94 479999988430 01122477889999987543 267899999999
Q ss_pred HHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 570 VLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 570 vil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
|++|||++|+.||...... ..+..+.+ ..+. ...+ +......+.+++.+||+.+|++||++.|
T Consensus 221 vi~~el~~g~~p~~~~~~~-~~~~~~~~-~~~~---~~~~------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ 283 (291)
T cd06639 221 ITAIELGDGDPPLFDMHPV-KTLFKIPR-NPPP---TLLH------------PEKWCRSFNHFISQCLIKDFEARPSVTH 283 (291)
T ss_pred HHHHHHhhCCCCCCCCcHH-HHHHHHhc-CCCC---CCCc------------ccccCHHHHHHHHHHhhcChhhCcCHHH
Confidence 9999999999998753211 11111111 1010 0000 1123345789999999999999999999
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
+++
T Consensus 284 il~ 286 (291)
T cd06639 284 LLE 286 (291)
T ss_pred Hhc
Confidence 975
No 265
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.86 E-value=6.4e-22 Score=200.64 Aligned_cols=197 Identities=18% Similarity=0.143 Sum_probs=138.1
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC--CccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN--YFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
.+..|+..+..++|+|++++++.+..+...++||||++ +++.+++.... ..+++.....++.|+++||+|||.
T Consensus 45 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---- 119 (285)
T cd07861 45 TAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---- 119 (285)
T ss_pred HHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh----
Confidence 45678899999999999999999998889999999997 68998886522 468899999999999999999994
Q ss_pred CCeeecCCCCcc-------------------------cccccccccccCccccccCC-CcCccccchhhHHHHHHHHhCC
Q 040540 526 APIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 526 ~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~ 579 (669)
.+++|+|+++.. ......+++.|+|||++.+. .++.++|||||||++|||+||+
T Consensus 120 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~ 199 (285)
T cd07861 120 RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKK 199 (285)
T ss_pred CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCC
Confidence 479999998431 00122467899999987653 4788999999999999999999
Q ss_pred CCCCcCCCCCccHHHHHHHhCCC---Cc---------cccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPH---RL---------SEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
.||...... ..+....+..... .+ ...++...... ..........++.+++.+|++.||++|||+
T Consensus 200 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~ 276 (285)
T cd07861 200 PLFHGDSEI-DQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGS--LRSAVKNLDEDGLDLLEKMLIYDPAKRISA 276 (285)
T ss_pred CCCCCCCHH-HHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcch--hHHhcCCCCHHHHHHHHHHhcCChhhCCCH
Confidence 998652210 0111111100000 00 00000000000 000011234567899999999999999999
Q ss_pred HHHHH
Q 040540 648 TDAAA 652 (669)
Q Consensus 648 ~~v~~ 652 (669)
.+|++
T Consensus 277 ~~ll~ 281 (285)
T cd07861 277 KKALN 281 (285)
T ss_pred HHHhc
Confidence 99874
No 266
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.86 E-value=6.1e-22 Score=204.38 Aligned_cols=173 Identities=19% Similarity=0.143 Sum_probs=131.7
Q ss_pred chhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 450 DSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 450 ~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
..|...+... +|++++.+++++...+..++||||+++|+|.+++... ..+++..+..++.|+++|++|||. .++
T Consensus 48 ~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~----~~i 122 (323)
T cd05616 48 MVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHS----KGI 122 (323)
T ss_pred HHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CCE
Confidence 3455555555 5888888988888888899999999999999998754 458889999999999999999994 479
Q ss_pred eecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 529 IHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 529 ~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
+|||+|+.. ......||+.|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 123 vHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~ 202 (323)
T cd05616 123 IYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 202 (323)
T ss_pred EecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCC
Confidence 999998430 0112348999999999998889999999999999999999999997
Q ss_pred cCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 584 EMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 584 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
.... ..+...+..... . .+......+.+++.+|++.+|++|++.
T Consensus 203 ~~~~--~~~~~~i~~~~~---------~---------~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 203 GEDE--DELFQSIMEHNV---------A---------YPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCCH--HHHHHHHHhCCC---------C---------CCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 5321 112221111100 0 011233457899999999999999985
No 267
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.86 E-value=1.5e-23 Score=202.73 Aligned_cols=257 Identities=21% Similarity=0.184 Sum_probs=144.6
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccC-CcCCccCCccccCCccccccc
Q 040540 51 QRVTALNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAY-NKLSGSFPSWIGVLSKLRILR 129 (669)
Q Consensus 51 ~~v~~L~ls~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~ 129 (669)
...+.|+|..|+|+.+.+.+|+.++.|+.||||+|.|+.+-|++|..++.|..|.+.+ |+|+...-+.|++|..|+.|.
T Consensus 67 ~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 67 PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 4566777777777766666777788888888888877777777777777776666555 777755456777777888777
Q ss_pred ccccCccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCc------------ccCCccccCCCCC
Q 040540 130 LDYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQ------------GQIPTEIGSLQNL 197 (669)
Q Consensus 130 L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~------------~~~p~~~~~l~~L 197 (669)
+.-|++.-.....|..|++|..|.+..|.+...--..|..+..++++.+..|.+. ...|..++.++-.
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence 7777777666677777777777777777776444446777777777777666621 1223333333332
Q ss_pred CEEEccCCCCCCCCCccccC-CCCCcEEEcccCCCccccchhhhccCCCCCeeecccCcccccCCccccCCCCCCEEeCC
Q 040540 198 KNLDLADNKLSGLIPPTIFN-ISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLG 276 (669)
Q Consensus 198 ~~L~l~~N~l~~~~p~~~~~-l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls 276 (669)
.-..+.++++....+..|.. +..+..--.+.+...+.-|...+..+++|++|+|++|++++.-+.+|.....++.|.|.
T Consensus 227 ~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~ 306 (498)
T KOG4237|consen 227 SPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLT 306 (498)
T ss_pred chHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcC
Confidence 22222222222111111110 00110000111112223344444445555555555555555555555555555555555
Q ss_pred CCCccccCccccCCCCCCCEEEccCCccccC
Q 040540 277 FNSFSGHIPNTFGNLRHLSVLNVMMNNLTTE 307 (669)
Q Consensus 277 ~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 307 (669)
.|++...-...|.++..|+.|+|..|+++..
T Consensus 307 ~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~ 337 (498)
T KOG4237|consen 307 RNKLEFVSSGMFQGLSGLKTLSLYDNQITTV 337 (498)
T ss_pred cchHHHHHHHhhhccccceeeeecCCeeEEE
Confidence 5555433344455555555555555555443
No 268
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.86 E-value=6e-22 Score=200.72 Aligned_cols=197 Identities=21% Similarity=0.192 Sum_probs=137.8
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|+..+++++|+|++++++++......++||||++ ++|.+++... ...+++.....++.++++|++|||. .
T Consensus 45 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~----~ 119 (284)
T cd07860 45 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS----H 119 (284)
T ss_pred HHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 46678999999999999999999998889999999996 6899988653 3468899999999999999999994 4
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCccccccCCC-cCccccchhhHHHHHHHHhCCC
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGI-VSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
+++|+|+++.. ......++..|+|||+..+.. ++.++|||||||++|||+||+.
T Consensus 120 ~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~ 199 (284)
T cd07860 120 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 199 (284)
T ss_pred CeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 79999988431 001123677899999876644 6889999999999999999999
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCcccccccc---ccchhhhh---------hhhHHHHHHHHHHHhhcccCCCCCCCCHH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTN---LVREEQAF---------SAKMDCLLSIMDLALDCCMESPDKRMHMT 648 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~---------~~~~~~~~~~~~l~~~c~~~~P~~Rps~~ 648 (669)
||..... ...+.+..+..-... +.+.+. +......+ .........+.+++.+|++.||++||+++
T Consensus 200 p~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 276 (284)
T cd07860 200 LFPGDSE-IDQLFRIFRTLGTPD--EVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAK 276 (284)
T ss_pred CCCCCCH-HHHHHHHHHHhCCCC--hhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHH
Confidence 9864221 111111111110000 000000 00000000 00111234567999999999999999999
Q ss_pred HHHH
Q 040540 649 DAAA 652 (669)
Q Consensus 649 ~v~~ 652 (669)
++++
T Consensus 277 ~~l~ 280 (284)
T cd07860 277 AALA 280 (284)
T ss_pred HHhc
Confidence 9874
No 269
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.86 E-value=1.8e-22 Score=213.05 Aligned_cols=183 Identities=19% Similarity=0.241 Sum_probs=137.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.++..++|||++++++++......++||||+++|+|.+++... ..+++.....++.|++.||+|||. .+
T Consensus 47 ~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~----~g 121 (377)
T cd05629 47 HVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHK----LG 121 (377)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 4567889999999999999999999999999999999999999999753 457888888899999999999994 47
Q ss_pred eeecCCCCcc--------------c-c-----------------------------------------------------
Q 040540 528 IIHCEGEDSV--------------T-Q----------------------------------------------------- 539 (669)
Q Consensus 528 i~h~d~~~~~--------------~-~----------------------------------------------------- 539 (669)
|+|||+|+.. . .
T Consensus 122 ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (377)
T cd05629 122 FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNR 201 (377)
T ss_pred eeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcc
Confidence 9999998430 0 0
Q ss_pred ----cccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccch
Q 040540 540 ----TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVRE 615 (669)
Q Consensus 540 ----~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 615 (669)
...+||+.|+|||++.+..++.++|||||||++|||+||+.||....... .+..... ..... .
T Consensus 202 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~--~~~~~---~------- 268 (377)
T cd05629 202 RLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHE-TYRKIIN--WRETL---Y------- 268 (377)
T ss_pred cccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHH-HHHHHHc--cCCcc---C-------
Confidence 01358999999999988889999999999999999999999996532111 0111100 00000 0
Q ss_pred hhhhhhhHHHHHHHHHHHhhcccCCCCCC---CCHHHHHH
Q 040540 616 EQAFSAKMDCLLSIMDLALDCCMESPDKR---MHMTDAAA 652 (669)
Q Consensus 616 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~R---ps~~~v~~ 652 (669)
++........+.+++.+|+. +|.+| +++.|+++
T Consensus 269 ---~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~ 304 (377)
T cd05629 269 ---FPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS 304 (377)
T ss_pred ---CCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence 00011223457899999997 67665 58888876
No 270
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.86 E-value=4e-22 Score=204.11 Aligned_cols=187 Identities=16% Similarity=0.123 Sum_probs=141.3
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|+|++++++.+......++||||+++++|.+++... ..+++.....++.++++|+.|+|. .+
T Consensus 47 ~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~----~~ 121 (305)
T cd05609 47 QVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHN----YG 121 (305)
T ss_pred HHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 4567888999999999999999998888899999999999999999754 458888888999999999999995 47
Q ss_pred eeecCCCCccc---------------c-------------------------cccccccccCccccccCCCcCccccchh
Q 040540 528 IIHCEGEDSVT---------------Q-------------------------TTTMATIGYMAPEYGSEGIVSAKCDVYS 567 (669)
Q Consensus 528 i~h~d~~~~~~---------------~-------------------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~s 567 (669)
++|+|+++... . ....|+..|+|||.+....++.++||||
T Consensus 122 i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 201 (305)
T cd05609 122 IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWA 201 (305)
T ss_pred ccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHH
Confidence 99999884310 0 0123677899999998888999999999
Q ss_pred hHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 568 YGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 568 ~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
|||++|||++|+.||.....+ ++......... ..+.. ....+..+.+++.+||+.+|++||++
T Consensus 202 lG~vl~el~~g~~pf~~~~~~-----~~~~~~~~~~~---~~~~~---------~~~~~~~~~~li~~~l~~~P~~R~~~ 264 (305)
T cd05609 202 MGIILYEFLVGCVPFFGDTPE-----ELFGQVISDDI---EWPEG---------DEALPADAQDLISRLLRQNPLERLGT 264 (305)
T ss_pred HHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhccc---CCCCc---------cccCCHHHHHHHHHHhccChhhccCc
Confidence 999999999999998642211 11111100000 00000 01234457899999999999999997
Q ss_pred HHHHHHHHH
Q 040540 648 TDAAAKLKK 656 (669)
Q Consensus 648 ~~v~~~l~~ 656 (669)
.++.+.|+.
T Consensus 265 ~~~~~ll~~ 273 (305)
T cd05609 265 GGAFEVKQH 273 (305)
T ss_pred cCHHHHHhC
Confidence 766666654
No 271
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.86 E-value=1.3e-22 Score=214.02 Aligned_cols=183 Identities=19% Similarity=0.239 Sum_probs=137.0
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.++..++|+|++++++.+...+..++||||+++|+|.+++... ..++......++.|++.|++|||. .+
T Consensus 47 ~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~----~~ 121 (376)
T cd05598 47 HVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHK----MG 121 (376)
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 4567899999999999999999999999999999999999999999754 457777888899999999999995 47
Q ss_pred eeecCCCCcc--------------cc------------------------------------------------------
Q 040540 528 IIHCEGEDSV--------------TQ------------------------------------------------------ 539 (669)
Q Consensus 528 i~h~d~~~~~--------------~~------------------------------------------------------ 539 (669)
|+|||+|+.. ..
T Consensus 122 ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (376)
T cd05598 122 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLA 201 (376)
T ss_pred eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccc
Confidence 9999998431 00
Q ss_pred cccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhh
Q 040540 540 TTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAF 619 (669)
Q Consensus 540 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (669)
...+||+.|||||++.+..++.++|||||||++|||++|+.||....... ....+... .... . .
T Consensus 202 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~--~~~~i~~~-~~~~---~----------~ 265 (376)
T cd05598 202 HSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAE--TQLKVINW-ETTL---H----------I 265 (376)
T ss_pred cccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHH--HHHHHhcc-Cccc---c----------C
Confidence 01358999999999998889999999999999999999999997532111 11100000 0000 0 0
Q ss_pred hhhHHHHHHHHHHHhhcccCCCCCCC---CHHHHHH
Q 040540 620 SAKMDCLLSIMDLALDCCMESPDKRM---HMTDAAA 652 (669)
Q Consensus 620 ~~~~~~~~~~~~l~~~c~~~~P~~Rp---s~~~v~~ 652 (669)
+........+.+++.+|+ .+|.+|+ ++.|+++
T Consensus 266 ~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 266 PSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred CCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 001122345667787765 5999999 7888875
No 272
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.86 E-value=7.6e-22 Score=197.89 Aligned_cols=181 Identities=19% Similarity=0.259 Sum_probs=134.4
Q ss_pred cCchhhhhhccccccccceecccccc--ccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSN--PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
.+..|+.+++.++|+|++++++.+.. ....++++||+++++|.+++... ..+++.....++.++++|++|||.
T Consensus 50 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~LH~---- 124 (266)
T cd06651 50 ALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAY-GALTESVTRKYTRQILEGMSYLHS---- 124 (266)
T ss_pred HHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh----
Confidence 46678899999999999999988754 35668999999999999999753 357888899999999999999994
Q ss_pred CCeeecCCCCcc--------------c--------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 526 APIIHCEGEDSV--------------T--------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 526 ~~i~h~d~~~~~--------------~--------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
.+++|+|+++.. . .....|+..|+|||...+..++.++|||||||++||+++
T Consensus 125 ~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~ 204 (266)
T cd06651 125 NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLT 204 (266)
T ss_pred CCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHH
Confidence 479999988320 0 011237788999999988889999999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|+.||..... ... +....... ..+.+ +......+.+++ +||..+|++||+|+||++
T Consensus 205 g~~pf~~~~~----~~~-~~~~~~~~----~~~~~---------~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 205 EKPPWAEYEA----MAA-IFKIATQP----TNPQL---------PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CCCCccccch----HHH-HHHHhcCC----CCCCC---------chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 9999875321 111 11110000 01111 112233455666 789899999999999975
No 273
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.86 E-value=1.6e-21 Score=195.74 Aligned_cols=186 Identities=20% Similarity=0.283 Sum_probs=142.1
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..++.++|+|++++++.+...+..++||||+++++|.+++.+. ..+++.....++.++++|+.|||. .
T Consensus 48 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~----~ 122 (268)
T cd06630 48 EALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHE----N 122 (268)
T ss_pred HHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 45667899999999999999999999888899999999999999999753 467888999999999999999995 4
Q ss_pred CeeecCCCCccc------------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHH
Q 040540 527 PIIHCEGEDSVT------------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 527 ~i~h~d~~~~~~------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~ 576 (669)
+++|+|+++... .....|+..|+|||+..+..++.++||||+|++++||+
T Consensus 123 ~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~ 202 (268)
T cd06630 123 QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMA 202 (268)
T ss_pred CeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHH
Confidence 899999884210 00124677899999998888899999999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+|+.||...... .............. .+ ..+......+.+++.+|+..+|++||++.|+++
T Consensus 203 ~g~~p~~~~~~~--~~~~~~~~~~~~~~----~~---------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 203 TAKPPWNAEKHS--NHLALIFKIASATT----AP---------SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred hCCCCCCCCCCc--chHHHHHHHhccCC----CC---------CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 999998642211 11111111000000 00 012334566789999999999999999999874
No 274
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.86 E-value=2.4e-22 Score=212.38 Aligned_cols=133 Identities=19% Similarity=0.266 Sum_probs=114.8
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+.++..++|+|++++++.+......++|||||++|+|.+++.+. ..+++.....++.|++.|++|||. .
T Consensus 46 ~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~----~ 120 (382)
T cd05625 46 AHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHK----M 120 (382)
T ss_pred HHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 35667899999999999999999999999999999999999999999754 457777888899999999999995 4
Q ss_pred CeeecCCCCcc--------------c------------------------------------------------------
Q 040540 527 PIIHCEGEDSV--------------T------------------------------------------------------ 538 (669)
Q Consensus 527 ~i~h~d~~~~~--------------~------------------------------------------------------ 538 (669)
+|+|||+|+.. .
T Consensus 121 ~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (382)
T cd05625 121 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQH 200 (382)
T ss_pred CeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhcccc
Confidence 79999998430 0
Q ss_pred ----ccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCc
Q 040540 539 ----QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE 584 (669)
Q Consensus 539 ----~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 584 (669)
..+.+||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 201 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~ 250 (382)
T cd05625 201 QRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLA 250 (382)
T ss_pred ccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCC
Confidence 0112589999999999888899999999999999999999999975
No 275
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.86 E-value=8.7e-22 Score=196.47 Aligned_cols=183 Identities=19% Similarity=0.229 Sum_probs=140.7
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..++.++|+|++++++++......++++||+++++|.+++.+. ..+++.....++.++++|++|||. .
T Consensus 47 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~----~ 121 (258)
T cd06632 47 KQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHD----R 121 (258)
T ss_pred HHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 45677899999999999999999998888899999999999999999754 357888999999999999999994 4
Q ss_pred CeeecCCCCcc------------------------cccccccccccCccccccCCC-cCccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGI-VSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+++|+|+++.. ......|+..|+|||...... ++.++|+|||||++|||++|+.|
T Consensus 122 ~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~p 201 (258)
T cd06632 122 NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPP 201 (258)
T ss_pred CcccCCCCHHHEEECCCCCEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCC
Confidence 79999988431 011234788899999887766 89999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|..... ......+.... ... .+ +......+.+++.+||+.+|++||++.++++
T Consensus 202 f~~~~~-~~~~~~~~~~~---~~~-~~-------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 202 WSQLEG-VAAVFKIGRSK---ELP-PI-------------PDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred cccCcH-HHHHHHHHhcc---cCC-Cc-------------CCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 865321 11111111100 000 00 1123355688999999999999999999875
No 276
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.86 E-value=8.5e-22 Score=199.85 Aligned_cols=199 Identities=22% Similarity=0.186 Sum_probs=139.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|+|++++++++..+...++||||++++.+.++.... ..+++.....++.++++|++|||. .+
T Consensus 46 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~----~~ 120 (286)
T cd07846 46 IAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHS----HN 120 (286)
T ss_pred HHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 4557889999999999999999999889999999999999998887643 348999999999999999999995 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
++|+|+++.. ......|+..|+|||+..+ ..++.++|||||||++|||++|+.|
T Consensus 121 i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~ 200 (286)
T cd07846 121 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPL 200 (286)
T ss_pred ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCC
Confidence 9999988431 0011247788999998865 4478899999999999999999988
Q ss_pred CCcCCCCCccHHHHHH--HhCCCCccccc----------cccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 582 TDEMFTGEMSLRRWVK--ESLPHRLSEVV----------DTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~--~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
|..... ...+..... ........... .+..................+.+++.+||..+|++||+|.+
T Consensus 201 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~ 279 (286)
T cd07846 201 FPGDSD-IDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQ 279 (286)
T ss_pred CCCCch-HHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHH
Confidence 864211 000101000 00000000000 00000000000011234567889999999999999999999
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
+++
T Consensus 280 il~ 282 (286)
T cd07846 280 LLH 282 (286)
T ss_pred Hhc
Confidence 875
No 277
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.86 E-value=9.8e-22 Score=183.59 Aligned_cols=186 Identities=21% Similarity=0.210 Sum_probs=142.9
Q ss_pred hhhhhhccc-cccccceecccccc----ccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 451 SECEVLRNV-RHRNLIKIISSCSN----PDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 451 ~e~~~l~~l-~h~niv~l~~~~~~----~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
+|++.-... .|+|||.+++.+.+ .....+|||.|+||.|+..+.+++ ..+.+.+...|+++|+.|+.|||
T Consensus 103 rEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH---- 178 (400)
T KOG0604|consen 103 REVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH---- 178 (400)
T ss_pred hHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH----
Confidence 466655444 69999999998865 344568999999999999998754 46888899999999999999999
Q ss_pred CCCeeecCCCCcc---------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 525 SAPIIHCEGEDSV---------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 525 ~~~i~h~d~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
+..|.|||+|+.. ...+.+-|+.|.|||++...+|+..+|+||+||++|-|+.
T Consensus 179 ~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLC 258 (400)
T KOG0604|consen 179 SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 258 (400)
T ss_pred hcchhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhc
Confidence 4589999999530 1112246899999999999999999999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|-+||....... +..-+++.+..... .+..++|...+..+.+++.+.+..+|.+|.|+.+++.
T Consensus 259 GyPPFYS~hg~a--ispgMk~rI~~gqy----------~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 259 GYPPFYSNHGLA--ISPGMKRRIRTGQY----------EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred CCCcccccCCcc--CChhHHhHhhccCc----------cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 999997644321 11111111111100 1223468899999999999999999999999999875
No 278
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.85 E-value=1.7e-21 Score=197.53 Aligned_cols=197 Identities=17% Similarity=0.144 Sum_probs=141.4
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..++.++|+|++++++++..+...++||||+ +++|.+++......+++.++..++.++++|++|||. .+
T Consensus 45 ~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~----~~ 119 (286)
T cd07832 45 QALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHA----NG 119 (286)
T ss_pred HHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 4667889999999999999999998888999999999 999999997666678999999999999999999995 47
Q ss_pred eeecCCCCcc-----------------------c---ccccccccccCccccccCC-CcCccccchhhHHHHHHHHhCCC
Q 040540 528 IIHCEGEDSV-----------------------T---QTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 528 i~h~d~~~~~-----------------------~---~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
++|+|+++.. . .....|+..|+|||+..+. .++.++||||+||+++||+||+.
T Consensus 120 i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~ 199 (286)
T cd07832 120 IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSP 199 (286)
T ss_pred eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCc
Confidence 9999988420 0 1123578899999988654 46899999999999999999987
Q ss_pred CCCcCCCCCccHHHHHHHhCCC-------------CccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPH-------------RLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
||.... ......++...... ....+..+.-... .......+....+.+++.+|+..+|.+||++
T Consensus 200 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~ 276 (286)
T cd07832 200 LFPGEN--DIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPI-PLEEIFPDASPEALDLLKGLLVYDPSKRLSA 276 (286)
T ss_pred CcCCCC--HHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcc-hHHHhCCCccHHHHHHHHHHhccChhhCCCH
Confidence 775421 11111111111100 0000000000000 0000011334678899999999999999999
Q ss_pred HHHHH
Q 040540 648 TDAAA 652 (669)
Q Consensus 648 ~~v~~ 652 (669)
+++++
T Consensus 277 ~~~l~ 281 (286)
T cd07832 277 AEALR 281 (286)
T ss_pred HHHhh
Confidence 99875
No 279
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.85 E-value=8.2e-22 Score=190.91 Aligned_cols=180 Identities=21% Similarity=0.251 Sum_probs=143.3
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
-.+.+|+++|+.+.||||+.++..+.+.+...|||||..+|.|++++.+. ..+++.+...|++||..|+.|+|. .
T Consensus 98 vhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSAVhYCHk----n 172 (668)
T KOG0611|consen 98 VHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISER-GSLSEREARHFFRQIVSAVHYCHK----N 172 (668)
T ss_pred HHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHhh----c
Confidence 34668999999999999999999999999999999999999999999864 558999999999999999999994 4
Q ss_pred CeeecCCCCc------------------------ccccccccccccCccccccCCCcC-ccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDS------------------------VTQTTTMATIGYMAPEYGSEGIVS-AKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~------------------------~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~Gvil~el~tg~~p 581 (669)
+++|||+|-. ....+++|++-|..||+..+..|. +.+|.||+||+||-++.|..|
T Consensus 173 rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMP 252 (668)
T KOG0611|consen 173 RVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMP 252 (668)
T ss_pred cceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccc
Confidence 8999998821 123456899999999999988765 789999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|++. +...+++-++. ... ..| +-+.++.-+|..++..+|++|-|..||+.
T Consensus 253 FDG~--Dhk~lvrQIs~---GaY---rEP-------------~~PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 253 FDGR--DHKRLVRQISR---GAY---REP-------------ETPSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred cCCc--hHHHHHHHhhc---ccc---cCC-------------CCCchHHHHHHHHHhcCcccchhHHHHhh
Confidence 9863 22222221111 111 111 11233457888999999999999999975
No 280
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.85 E-value=1.4e-21 Score=194.89 Aligned_cols=185 Identities=26% Similarity=0.480 Sum_probs=142.9
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCc-cCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~-l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+.+..|+..+..++|+|++++++.+...+..+++|||+++++|.+++...... +++.....++.+++.|++|||+.
T Consensus 46 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~--- 122 (258)
T smart00219 46 EEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK--- 122 (258)
T ss_pred HHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---
Confidence 45667889999999999999999998888899999999999999999764433 89999999999999999999954
Q ss_pred CCeeecCCCCccc------------------------cc--ccccccccCccccccCCCcCccccchhhHHHHHHHHh-C
Q 040540 526 APIIHCEGEDSVT------------------------QT--TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-R 578 (669)
Q Consensus 526 ~~i~h~d~~~~~~------------------------~~--~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g 578 (669)
+++|+|+++... .. ...++..|+|||......++.++||||+|++++||++ |
T Consensus 123 -~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g 201 (258)
T smart00219 123 -NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLG 201 (258)
T ss_pred -CeeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCC
Confidence 799999985310 00 1125678999999988889999999999999999999 7
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKL 654 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l 654 (669)
+.||... ....+.+.+....... .+...+..+.+++.+|+..+|++|||+.|+++.|
T Consensus 202 ~~p~~~~--~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 202 ESPYPGM--SNEEVLEYLKKGYRLP-----------------KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCCCCC--CHHHHHHHHhcCCCCC-----------------CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 8887652 1112222222111000 0112345678999999999999999999998764
No 281
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.85 E-value=1e-21 Score=206.81 Aligned_cols=198 Identities=20% Similarity=0.191 Sum_probs=137.9
Q ss_pred ccCchhhhhhccccccccceecccccccc-----ccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhc
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPD-----FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
+.+..|+.+++.++|+|++++++.+..+. ..++|+||+. ++|.+++.. ...+++.....++.++++||+|||.
T Consensus 44 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~ 121 (372)
T cd07853 44 KRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHS 121 (372)
T ss_pred HHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 34567899999999999999999987765 6789999997 688888864 3468899999999999999999994
Q ss_pred CCCCCCeeecCCCCcc--------------------------cccccccccccCccccccCC-CcCccccchhhHHHHHH
Q 040540 522 GHSSAPIIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLME 574 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~e 574 (669)
.+++|||+|+.. ......+|..|+|||++.+. .++.++|||||||++||
T Consensus 122 ----~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~e 197 (372)
T cd07853 122 ----AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAE 197 (372)
T ss_pred ----CCeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHH
Confidence 479999998531 01122468899999998764 47899999999999999
Q ss_pred HHhCCCCCCcCCCCCccHHHHHHHhCCCCccc-----------ccccccc---chhhhhhhhHHHHHHHHHHHhhcccCC
Q 040540 575 TFTRKRPTDEMFTGEMSLRRWVKESLPHRLSE-----------VVDTNLV---REEQAFSAKMDCLLSIMDLALDCCMES 640 (669)
Q Consensus 575 l~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~-----------~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~c~~~~ 640 (669)
|++|+.||..... ......+.........+ .+..... .....+....+....+.+++.+|++.|
T Consensus 198 l~~g~~pf~~~~~--~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d 275 (372)
T cd07853 198 LLGRRILFQAQSP--IQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFD 275 (372)
T ss_pred HHcCCCCCCCCCH--HHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCC
Confidence 9999999965321 11111111100000000 0000000 000000011123456789999999999
Q ss_pred CCCCCCHHHHHH
Q 040540 641 PDKRMHMTDAAA 652 (669)
Q Consensus 641 P~~Rps~~~v~~ 652 (669)
|.+|||+.|+++
T Consensus 276 P~~R~t~~e~l~ 287 (372)
T cd07853 276 PDKRISAADALA 287 (372)
T ss_pred hhhCcCHHHHhc
Confidence 999999999986
No 282
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.85 E-value=8.6e-22 Score=197.57 Aligned_cols=188 Identities=22% Similarity=0.231 Sum_probs=142.7
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC--CCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~--~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
..+..|+..++.++|+|++++++.+......++++||+++++|.++++.. ...+++.....++.+++.|++|||.
T Consensus 44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~--- 120 (267)
T cd06610 44 DELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS--- 120 (267)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---
Confidence 45677888899999999999999998888999999999999999999753 2458888999999999999999994
Q ss_pred CCCeeecCCCCcc-----------------------------cccccccccccCccccccCC-CcCccccchhhHHHHHH
Q 040540 525 SAPIIHCEGEDSV-----------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLME 574 (669)
Q Consensus 525 ~~~i~h~d~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~e 574 (669)
.+++|+|+++.. ......|+..|+|||++... .++.++|||||||++||
T Consensus 121 -~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~ 199 (267)
T cd06610 121 -NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIE 199 (267)
T ss_pred -CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHH
Confidence 479999988420 00112478899999998776 68999999999999999
Q ss_pred HHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 575 TFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 575 l~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|++|+.||...... ..+....... +....... .....+..+.+++.+||..||++||++.++++
T Consensus 200 l~~g~~p~~~~~~~-~~~~~~~~~~-~~~~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 200 LATGAAPYSKYPPM-KVLMLTLQND-PPSLETGA------------DYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred HHhCCCCccccChh-hhHHHHhcCC-CCCcCCcc------------ccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 99999999753221 1122222111 11000000 01233456789999999999999999999875
No 283
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.85 E-value=9.8e-22 Score=194.78 Aligned_cols=202 Identities=21% Similarity=0.281 Sum_probs=144.8
Q ss_pred ccccCchhhhhh--ccccccccceecccccccc----ccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhh
Q 040540 445 AFRSFDSECEVL--RNVRHRNLIKIISSCSNPD----FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 518 (669)
Q Consensus 445 ~~~~~~~e~~~l--~~l~h~niv~l~~~~~~~~----~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~ 518 (669)
..++|..|-.+. -.++|+||++++++-.... +.+||+||.++|+|.+||+. ..++|....+|+..+++||+|
T Consensus 245 ~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~--ntisw~~~cria~SmarGLa~ 322 (534)
T KOG3653|consen 245 EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKA--NTISWNSLCRIAESMARGLAH 322 (534)
T ss_pred HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHh--ccccHHHHHHHHHHHHHHHHH
Confidence 345666665554 4679999999999876544 77899999999999999975 568999999999999999999
Q ss_pred hhcC-----CCCCCeeecCCCCc---------------------------ccccccccccccCccccccCCC------cC
Q 040540 519 LRHG-----HSSAPIIHCEGEDS---------------------------VTQTTTMATIGYMAPEYGSEGI------VS 560 (669)
Q Consensus 519 lh~~-----~~~~~i~h~d~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~------~~ 560 (669)
||.. +-.++|+|||+|.. ......+||.+|||||++.+.. .-
T Consensus 323 LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Af 402 (534)
T KOG3653|consen 323 LHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAF 402 (534)
T ss_pred hcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHH
Confidence 9953 44589999999843 1123357999999999986632 22
Q ss_pred ccccchhhHHHHHHHHhCCCCCC--------cCCCC-------CccHHHHHHHhCCCCccccccccccchhhhhhhhHHH
Q 040540 561 AKCDVYSYGVLLMETFTRKRPTD--------EMFTG-------EMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDC 625 (669)
Q Consensus 561 ~~~Dv~s~Gvil~el~tg~~p~~--------~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (669)
.+.||||+|.|+|||+++..-.+ -.+.. ...++..|.+. ...|.+.. .......
T Consensus 403 kr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~k-------K~RP~~p~----~W~~h~~ 471 (534)
T KOG3653|consen 403 KRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRK-------KQRPKIPD----AWRKHAG 471 (534)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhh-------ccCCCChh----hhhcCcc
Confidence 47899999999999999765332 11110 01122222111 00111111 1112345
Q ss_pred HHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhHH
Q 040540 626 LLSIMDLALDCCMESPDKRMHMTDAAAKLKKIKV 659 (669)
Q Consensus 626 ~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~~ 659 (669)
+..+.+.++.||..||+.|-|+.-|.+++.++..
T Consensus 472 ~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~ 505 (534)
T KOG3653|consen 472 MAVLCETIEECWDHDAEARLTAGCVEERMAELMM 505 (534)
T ss_pred HHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence 6778999999999999999999999998887753
No 284
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.85 E-value=5.1e-22 Score=208.12 Aligned_cols=183 Identities=16% Similarity=0.211 Sum_probs=135.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+.++..++|||++++++.+..+...++||||+++|+|.+++... .+++.....++.+++.||+|||. .+
T Consensus 89 ~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~----~~ 162 (370)
T cd05621 89 FFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHS----MG 162 (370)
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 3557888999999999999999999999999999999999999999753 47888888999999999999994 48
Q ss_pred eeecCCCCcc--------------------------cccccccccccCccccccCC----CcCccccchhhHHHHHHHHh
Q 040540 528 IIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGSEG----IVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 528 i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~s~Gvil~el~t 577 (669)
|+|||+|+.. ......||+.|||||++.+. .++.++||||+||++|||+|
T Consensus 163 IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~ 242 (370)
T cd05621 163 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLV 242 (370)
T ss_pred eEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHh
Confidence 9999999430 01133599999999988653 37889999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCC--CCCHHHHHH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDK--RMHMTDAAA 652 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~--Rps~~~v~~ 652 (669)
|+.||...... ..+...+.... . + .++........+.+++.+|+..+|.+ ||++.|+++
T Consensus 243 G~~Pf~~~~~~-~~~~~i~~~~~-----~-----~-----~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~ 303 (370)
T cd05621 243 GDTPFYADSLV-GTYSKIMDHKN-----S-----L-----NFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ 303 (370)
T ss_pred CCCCCCCCCHH-HHHHHHHhCCc-----c-----c-----CCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence 99999653210 01111111000 0 0 00111223455678888898755543 889999876
No 285
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.85 E-value=1.7e-21 Score=198.92 Aligned_cols=199 Identities=21% Similarity=0.203 Sum_probs=139.2
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|+|++++++++......++||||+ +|+|.+++......+++.....++.|+++||.|||. .+
T Consensus 48 ~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~----~~ 122 (298)
T cd07841 48 TALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHS----NW 122 (298)
T ss_pred HHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 3456888899999999999999999888899999999 899999998654468999999999999999999995 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
++|+|+++.. ......++..|+|||.+.+ ..++.++|||||||++|||++|..|
T Consensus 123 i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~ 202 (298)
T cd07841 123 ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPF 202 (298)
T ss_pred eeecCCChhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCcc
Confidence 9999998531 0011235678999998755 4578999999999999999999777
Q ss_pred CCcCCCCCccHHHHHHHh-CCC--------CccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 582 TDEMFTGEMSLRRWVKES-LPH--------RLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|..... ...+....... .+. ..........................+.+++.+||+.+|++|||++||++
T Consensus 203 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 203 LPGDSD-IDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred ccCCcc-HHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 654221 11111111100 000 00000000000000000011233567889999999999999999999987
No 286
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.85 E-value=2.1e-21 Score=194.45 Aligned_cols=186 Identities=23% Similarity=0.238 Sum_probs=145.2
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+..+..++|+|++++++.+......+++|||+++++|.+++... ..+++.....++.++++|++|+|.. .
T Consensus 44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~---~ 119 (264)
T cd06623 44 KQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTK---R 119 (264)
T ss_pred HHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhcc---C
Confidence 45677888999999999999999999999999999999999999999754 5689999999999999999999951 5
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+++|+|+++.. ......|+..|+|||......++.++||||||+++|||+||+.|
T Consensus 120 ~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p 199 (264)
T cd06623 120 HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFP 199 (264)
T ss_pred CCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 79999988430 00123477899999999888899999999999999999999999
Q ss_pred CCcCCC-CCccHHHHHHHhCCCCccccccccccchhhhhhhhHH-HHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 582 TDEMFT-GEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMD-CLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 582 ~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
|..... ....+..++...... .+ +.. .+..+.+++.+|+..+|++||++.++++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~--------~~---------~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 200 FLPPGQPSFFELMQAICDGPPP--------SL---------PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CccccccCHHHHHHHHhcCCCC--------CC---------CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 876432 111222222211100 00 111 34567899999999999999999999873
No 287
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.85 E-value=1.5e-21 Score=195.45 Aligned_cols=186 Identities=23% Similarity=0.291 Sum_probs=141.1
Q ss_pred cccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
.+.+..|+..++.++|+|++++++.+......++|+||+++++|.+++... ..+++.....++.++++|+.|||.
T Consensus 43 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~---- 117 (264)
T cd06626 43 IKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHS---- 117 (264)
T ss_pred HHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHH----
Confidence 345678899999999999999999988888899999999999999999854 457888899999999999999995
Q ss_pred CCeeecCCCCcc------------------------c-----ccccccccccCccccccCCC---cCccccchhhHHHHH
Q 040540 526 APIIHCEGEDSV------------------------T-----QTTTMATIGYMAPEYGSEGI---VSAKCDVYSYGVLLM 573 (669)
Q Consensus 526 ~~i~h~d~~~~~------------------------~-----~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~Gvil~ 573 (669)
.+++|+|+++.. . .....++..|+|||++.+.. ++.++||||||+++|
T Consensus 118 ~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~ 197 (264)
T cd06626 118 HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVL 197 (264)
T ss_pred CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHH
Confidence 479999987320 0 00124678999999987765 889999999999999
Q ss_pred HHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 574 ETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 574 el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|+++|+.||..... .......+....+. . .+........+.+++.+||+.+|++||++.|++.
T Consensus 198 ~l~~g~~pf~~~~~-~~~~~~~~~~~~~~--------~-------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 198 EMATGKRPWSELDN-EFQIMFHVGAGHKP--------P-------IPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred HHHhCCCCccCCcc-hHHHHHHHhcCCCC--------C-------CCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 99999999965321 11111111111000 0 0111223455679999999999999999999864
No 288
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.85 E-value=1.7e-21 Score=199.73 Aligned_cols=183 Identities=23% Similarity=0.237 Sum_probs=138.7
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..++.++|+|++++++++......++||||+. |++.+++......+++.++..++.+++.|+.|||. .+
T Consensus 61 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~----~~ 135 (308)
T cd06634 61 DIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS----HN 135 (308)
T ss_pred HHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 45678899999999999999999988888999999997 68888886555668999999999999999999994 47
Q ss_pred eeecCCCCcc---------------------cccccccccccCcccccc---CCCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 528 IIHCEGEDSV---------------------TQTTTMATIGYMAPEYGS---EGIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 528 i~h~d~~~~~---------------------~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
++|+|+++.. ......|+..|+|||.+. ...++.++|||||||++|||++|+.|+.
T Consensus 136 i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 215 (308)
T cd06634 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215 (308)
T ss_pred cccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCc
Confidence 9999998431 111224788999999874 3457889999999999999999999986
Q ss_pred cCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 584 EMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 584 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
.... ...+..+.....+. .. .......+.+++.+||+.+|++||++.++++.
T Consensus 216 ~~~~-~~~~~~~~~~~~~~---------~~--------~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 216 NMNA-MSALYHIAQNESPA---------LQ--------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred cccH-HHHHHHHhhcCCCC---------cC--------cccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 5321 11111111111100 00 11233457899999999999999999999864
No 289
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.85 E-value=2.9e-21 Score=195.47 Aligned_cols=194 Identities=19% Similarity=0.160 Sum_probs=137.0
Q ss_pred hhhhhhcccc-ccccceeccccccc--cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 451 SECEVLRNVR-HRNLIKIISSCSNP--DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 451 ~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.|+..+.++. |+|++++++.+... +..++|+||++ |++.+++......+++.+...++.++++|++|||. .+
T Consensus 46 ~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~----~~ 120 (282)
T cd07831 46 REIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHR----NG 120 (282)
T ss_pred HHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 5677777775 99999999998876 78899999997 68988887655678999999999999999999995 47
Q ss_pred eeecCCCCcc-----------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 528 IIHCEGEDSV-----------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 528 i~h~d~~~~~-----------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
++|+|+++.. ......++..|+|||+... ..++.++|||||||++|||++|+.||.
T Consensus 121 i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~ 200 (282)
T cd07831 121 IFHRDIKPENILIKDDILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFP 200 (282)
T ss_pred ceecccCHHHEEEcCCCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCC
Confidence 9999988431 0112247888999997644 557889999999999999999999996
Q ss_pred cCCCCCccHHHHHHHhCCC------------CccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHH
Q 040540 584 EMFTGEMSLRRWVKESLPH------------RLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAA 651 (669)
Q Consensus 584 ~~~~~~~~l~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~ 651 (669)
.... .....+....... .......+...... ........+..+.+++.+||..+|++||++++++
T Consensus 201 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l 277 (282)
T cd07831 201 GTNE--LDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTG-LRKLLPNASAEGLDLLKKLLAYDPDERITAKQAL 277 (282)
T ss_pred CCCH--HHHHHHHHHHcCCCCHHHHHhhcccccccccCccccccc-HHHHcccccHHHHHHHHHHhccCcccccCHHHHh
Confidence 5321 1111222111110 00000000000000 0001123467789999999999999999999987
Q ss_pred H
Q 040540 652 A 652 (669)
Q Consensus 652 ~ 652 (669)
+
T Consensus 278 ~ 278 (282)
T cd07831 278 R 278 (282)
T ss_pred h
Confidence 5
No 290
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.85 E-value=1.2e-21 Score=198.40 Aligned_cols=198 Identities=19% Similarity=0.202 Sum_probs=139.0
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|+..++.++|+|++++++++......+++|||++ ++|.+++.... ..+++..+..++.++++|++|||. .
T Consensus 44 ~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~----~ 118 (283)
T cd07835 44 TAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS----H 118 (283)
T ss_pred HHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 45678999999999999999999998899999999995 79999987543 358999999999999999999995 4
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCccccccCC-CcCccccchhhHHHHHHHHhCCC
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
+++|+|+++.. ......++..|+|||++.+. .++.++|||||||++|||+||+.
T Consensus 119 ~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 198 (283)
T cd07835 119 RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRP 198 (283)
T ss_pred CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCC
Confidence 79999988431 00122457889999987664 47899999999999999999999
Q ss_pred CCCcCCCCCccHHHHHHHhC-CCC--c------ccccc--ccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 581 PTDEMFTGEMSLRRWVKESL-PHR--L------SEVVD--TNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~-~~~--~------~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
||..... ...+...++... +.. + .+... +....... ..........+.+++.+|++.+|++||+++|
T Consensus 199 pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 276 (283)
T cd07835 199 LFPGDSE-IDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKA 276 (283)
T ss_pred CCCCCCH-HHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence 9865321 111122111110 000 0 00000 00000000 0001123356789999999999999999999
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
|++
T Consensus 277 il~ 279 (283)
T cd07835 277 ALQ 279 (283)
T ss_pred Hhc
Confidence 974
No 291
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.85 E-value=5e-22 Score=191.50 Aligned_cols=196 Identities=23% Similarity=0.216 Sum_probs=138.2
Q ss_pred cCchhhhhhccccccccceecccccc-----ccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSN-----PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHG 522 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~ 522 (669)
.-.+|+..++.++|+|++.+.+.... -..+|+|+|+|+ .+|++.++. +..+......-++.|+.+|++|+|.
T Consensus 67 RtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMe-tDL~~iik~-~~~L~d~H~q~f~YQiLrgLKyiHS- 143 (359)
T KOG0660|consen 67 RTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELME-TDLHQIIKS-QQDLTDDHAQYFLYQILRGLKYIHS- 143 (359)
T ss_pred HHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHh-hHHHHHHHc-CccccHHHHHHHHHHHHHhcchhhc-
Confidence 34578999999999999999887654 345799999995 799999985 3448888888899999999999994
Q ss_pred CCCCCeeecCCCCcc---------------------------cccccccccccCccccccC-CCcCccccchhhHHHHHH
Q 040540 523 HSSAPIIHCEGEDSV---------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLME 574 (669)
Q Consensus 523 ~~~~~i~h~d~~~~~---------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~e 574 (669)
.+|+|||+|++. ..+..+.|..|.|||++.. ..|+.+.||||.|||+.|
T Consensus 144 ---AnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AE 220 (359)
T KOG0660|consen 144 ---ANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAE 220 (359)
T ss_pred ---ccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHH
Confidence 589999999540 1133468999999998765 569999999999999999
Q ss_pred HHhCCCCCCcCCCCCccHHHHHHHhCC---CC-c--------ccccc--ccccchhhhhhhhHHHHHHHHHHHhhcccCC
Q 040540 575 TFTRKRPTDEMFTGEMSLRRWVKESLP---HR-L--------SEVVD--TNLVREEQAFSAKMDCLLSIMDLALDCCMES 640 (669)
Q Consensus 575 l~tg~~p~~~~~~~~~~l~~~~~~~~~---~~-~--------~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~ 640 (669)
|++|++-|.+. +..+....+-...+ +. + ...+. +....... ........+.++++..+++..|
T Consensus 221 mL~gkplFpG~--d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f-~~~fp~a~p~AidLlekmL~fd 297 (359)
T KOG0660|consen 221 MLTGKPLFPGK--DYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPF-SSIFPNANPLAIDLLEKMLVFD 297 (359)
T ss_pred HHcCCCCCCCC--chHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCH-HHHcCCCCHHHHHHHHHHhccC
Confidence 99999877542 11111111111110 00 0 00000 00000000 0011245567899999999999
Q ss_pred CCCCCCHHHHHH
Q 040540 641 PDKRMHMTDAAA 652 (669)
Q Consensus 641 P~~Rps~~~v~~ 652 (669)
|.+|+|++|+++
T Consensus 298 P~kRita~eAL~ 309 (359)
T KOG0660|consen 298 PKKRITAEEALA 309 (359)
T ss_pred ccccCCHHHHhc
Confidence 999999999976
No 292
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.85 E-value=1.7e-21 Score=194.99 Aligned_cols=179 Identities=21% Similarity=0.200 Sum_probs=137.5
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|...++.++|+|++++++.+..+...++++||+++++|.+++.+. ..+++.....++.++++|+.|+|. .
T Consensus 38 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~----~ 112 (262)
T cd05572 38 EHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDR-GLFDEYTARFYIACVVLAFEYLHN----R 112 (262)
T ss_pred HHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhh----C
Confidence 34667888999999999999999998888999999999999999999754 457888999999999999999994 5
Q ss_pred CeeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 527 PIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 527 ~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+++|+|+++.. ......|+..|+|||......++.++|+||||+++|||++|+.||
T Consensus 113 ~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~ 192 (262)
T cd05572 113 GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPF 192 (262)
T ss_pred CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCc
Confidence 79999988431 011234788999999988888899999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH 646 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps 646 (669)
.....+. .+......... .. . ..+......+.+++.+||+.+|++||+
T Consensus 193 ~~~~~~~---~~~~~~~~~~~-~~---~---------~~~~~~~~~~~~~i~~~l~~~p~~R~~ 240 (262)
T cd05572 193 GEDDEDP---MEIYNDILKGN-GK---L---------EFPNYIDKAAKDLIKQLLRRNPEERLG 240 (262)
T ss_pred CCCCCCH---HHHHHHHhccC-CC---C---------CCCcccCHHHHHHHHHHccCChhhCcC
Confidence 7643211 11111111000 00 0 011122456889999999999999999
No 293
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.85 E-value=8.6e-21 Score=177.42 Aligned_cols=162 Identities=20% Similarity=0.151 Sum_probs=112.8
Q ss_pred CChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCC---CCc-----ccccccccccccCccccccCCC
Q 040540 487 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEG---EDS-----VTQTTTMATIGYMAPEYGSEGI 558 (669)
Q Consensus 487 g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~---~~~-----~~~~~~~gt~~y~aPE~~~~~~ 558 (669)
|+|.+++++.+..+++.++..|+.|+++||+|||..+....|+-.+. +.. .......||+.|||||++.+..
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~kp~Nil~~~~~~~~~fG~~~~~~~~~~~g~~~y~aPE~~~~~~ 80 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQAKSGNILLTWDGLLKLDGSVAFKTPEQSRVDPYFMAPEVIQGQS 80 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccEeEcCccceeeccceEeeccccCCCcccccChHHhcCCC
Confidence 78999998766779999999999999999999997642223332110 100 0112235899999999999989
Q ss_pred cCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHH--HHHHHHHhhc
Q 040540 559 VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCL--LSIMDLALDC 636 (669)
Q Consensus 559 ~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~c 636 (669)
++.|+|||||||++|||+||+.||.........+..+.....+..... . ....... ..+.+++.+|
T Consensus 81 ~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~~~i~~c 148 (176)
T smart00750 81 YTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRD---R---------SNLESVSAARSFADFMRVC 148 (176)
T ss_pred CcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccc---c---------ccHHHHHhhhhHHHHHHHH
Confidence 999999999999999999999998653322222222222211110000 0 0011222 2588999999
Q ss_pred ccCCCCCCCCHHHHHHHHHHhHHH
Q 040540 637 CMESPDKRMHMTDAAAKLKKIKVK 660 (669)
Q Consensus 637 ~~~~P~~Rps~~~v~~~l~~~~~~ 660 (669)
|..+|++||++.|+++.+..+...
T Consensus 149 l~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 149 ASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred HhcccccccCHHHHHHHHHHHHHH
Confidence 999999999999999988776544
No 294
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.85 E-value=2.2e-21 Score=195.34 Aligned_cols=188 Identities=22% Similarity=0.397 Sum_probs=139.7
Q ss_pred ccCchhhhhhccccccccceecccccccc------ccceeeccCCCCChHHhhhcC-----CCccCHHHHHHHHHhHHhh
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPD------FKALVLEFMPNGSLEKWLYSH-----NYFLDILERLNIMIDVGSA 515 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~ey~~~g~L~~~l~~~-----~~~l~~~~~~~i~~~i~~~ 515 (669)
+.+..|+..++.++|||++++++.+.... ..++++||+++|+|.+++... ...+++.....++.++++|
T Consensus 46 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~ 125 (273)
T cd05074 46 EEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASG 125 (273)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHH
Confidence 34667899999999999999999775432 236788999999999887531 2347888899999999999
Q ss_pred hhhhhcCCCCCCeeecCCCCccc---------------------------ccccccccccCccccccCCCcCccccchhh
Q 040540 516 LEYLRHGHSSAPIIHCEGEDSVT---------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSY 568 (669)
Q Consensus 516 l~~lh~~~~~~~i~h~d~~~~~~---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~ 568 (669)
++|||. .+++|+|+++... .....+++.|++||......++.++|||||
T Consensus 126 l~~lH~----~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~sl 201 (273)
T cd05074 126 MEYLSS----KNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAF 201 (273)
T ss_pred HHHHHh----CCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHH
Confidence 999994 4799999995310 001123467999999888888999999999
Q ss_pred HHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 569 GVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 569 Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
||++|||++ |+.|+..... .....+........ .+.+....+.+++.+||+.+|++||++
T Consensus 202 G~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~~~l~~~p~~Rps~ 262 (273)
T cd05074 202 GVTMWEIMTRGQTPYAGVEN--SEIYNYLIKGNRLK-----------------QPPDCLEDVYELMCQCWSPEPKCRPSF 262 (273)
T ss_pred HHHHHHHhhCCCCCCCCCCH--HHHHHHHHcCCcCC-----------------CCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 999999999 8888765321 12222222111000 011234567899999999999999999
Q ss_pred HHHHHHHHHh
Q 040540 648 TDAAAKLKKI 657 (669)
Q Consensus 648 ~~v~~~l~~~ 657 (669)
.++++.|+++
T Consensus 263 ~~~~~~l~~~ 272 (273)
T cd05074 263 QHLRDQLELI 272 (273)
T ss_pred HHHHHHHHhh
Confidence 9999999875
No 295
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.85 E-value=2.8e-21 Score=195.06 Aligned_cols=182 Identities=20% Similarity=0.260 Sum_probs=141.4
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+..+..++|+|++++++.+......++||||+++++|.+++.. ..+++.....++.+++.|+.|||+ .
T Consensus 47 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~----~ 120 (277)
T cd06641 47 EDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHS----E 120 (277)
T ss_pred HHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHcc----C
Confidence 3566788899999999999999999988899999999999999999864 357899999999999999999995 4
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+++|+|+++.. ......|+..|+|||......++.++|||||||++|||++|+.|
T Consensus 121 ~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p 200 (277)
T cd06641 121 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPP 200 (277)
T ss_pred CeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence 89999988431 01112478889999999888889999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
+..... ......+....+ +.+ .......+.+++.+||+.+|++||+|.++++.
T Consensus 201 ~~~~~~--~~~~~~~~~~~~--------~~~---------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 201 HSELHP--MKVLFLIPKNNP--------PTL---------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCccch--HHHHHHHhcCCC--------CCC---------CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 865321 111111111100 001 11233457899999999999999999999983
No 296
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.85 E-value=7.6e-22 Score=207.06 Aligned_cols=183 Identities=17% Similarity=0.202 Sum_probs=134.4
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|..++..++|||++++++.+......++||||+++|+|.+++... .++......++.+++.|++|||. .+
T Consensus 89 ~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~----~~ 162 (371)
T cd05622 89 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHS----MG 162 (371)
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 3556888899999999999999999888999999999999999999753 46777888899999999999994 48
Q ss_pred eeecCCCCcc--------------------------cccccccccccCccccccCC----CcCccccchhhHHHHHHHHh
Q 040540 528 IIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGSEG----IVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 528 i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~s~Gvil~el~t 577 (669)
|+|||+|+.. ......||+.|||||++... .++.++|||||||++|||++
T Consensus 163 ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~ 242 (371)
T cd05622 163 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 242 (371)
T ss_pred EEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHh
Confidence 9999999530 01133589999999998653 37899999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCC--CCCHHHHHH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDK--RMHMTDAAA 652 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~--Rps~~~v~~ 652 (669)
|+.||..... ........... .. ..++.....+..+.+++.+|+..+|.+ ||++.|+++
T Consensus 243 G~~Pf~~~~~-----~~~~~~i~~~~-~~----------~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~ 303 (371)
T cd05622 243 GDTPFYADSL-----VGTYSKIMNHK-NS----------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 303 (371)
T ss_pred CCCCCCCCCH-----HHHHHHHHcCC-Cc----------ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhc
Confidence 9999975221 11111110000 00 001112233456788999999844433 778888876
No 297
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.85 E-value=2.2e-21 Score=196.35 Aligned_cols=183 Identities=19% Similarity=0.203 Sum_probs=133.8
Q ss_pred cCchhhhhhccc-cccccceecccccc------ccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhh
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSN------PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYL 519 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~------~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~l 519 (669)
.+..|...+.++ +|+|++++++++.. ....+++|||+++|+|.+++... ...+++.....++.|+++|+.||
T Consensus 58 ~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L 137 (282)
T cd06636 58 EIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHL 137 (282)
T ss_pred HHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345677777777 69999999998753 45678999999999999999753 34578888889999999999999
Q ss_pred hcCCCCCCeeecCCCCcc-------------------------cccccccccccCcccccc-----CCCcCccccchhhH
Q 040540 520 RHGHSSAPIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGS-----EGIVSAKCDVYSYG 569 (669)
Q Consensus 520 h~~~~~~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G 569 (669)
|. .+++|+|+++.. ......|+..|+|||.+. ...++.++||||||
T Consensus 138 H~----~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG 213 (282)
T cd06636 138 HA----HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLG 213 (282)
T ss_pred HH----CCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHH
Confidence 95 479999988320 011234788999999875 34578899999999
Q ss_pred HHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 570 VLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 570 vil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
|++|||+||+.||........ ... +... ..+.+. ....+..+.+++.+||+.||.+||++.|
T Consensus 214 ~~l~el~~g~~p~~~~~~~~~-~~~-~~~~--------~~~~~~--------~~~~~~~~~~li~~cl~~~p~~Rp~~~e 275 (282)
T cd06636 214 ITAIEMAEGAPPLCDMHPMRA-LFL-IPRN--------PPPKLK--------SKKWSKKFIDFIEGCLVKNYLSRPSTEQ 275 (282)
T ss_pred HHHHHHHhCCCCccccCHHhh-hhh-HhhC--------CCCCCc--------ccccCHHHHHHHHHHhCCChhhCcCHHH
Confidence 999999999999865321110 000 0000 001110 1123456889999999999999999999
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
+++
T Consensus 276 ll~ 278 (282)
T cd06636 276 LLK 278 (282)
T ss_pred Hhc
Confidence 864
No 298
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.85 E-value=3.7e-21 Score=189.30 Aligned_cols=205 Identities=21% Similarity=0.329 Sum_probs=147.1
Q ss_pred ccccCchhhhhhc--cccccccceeccccccc----cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhh
Q 040540 445 AFRSFDSECEVLR--NVRHRNLIKIISSCSNP----DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEY 518 (669)
Q Consensus 445 ~~~~~~~e~~~l~--~l~h~niv~l~~~~~~~----~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~ 518 (669)
..+++.+|.++.. .++|+||+.++++=..+ ...+||.+|-+.|||+|+|.+ ..++....+++++.+|.||++
T Consensus 246 dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaH 323 (513)
T KOG2052|consen 246 DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAH 323 (513)
T ss_pred chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHH
Confidence 3456666666544 56999999999875443 246899999999999999975 678999999999999999999
Q ss_pred hhcC----CCCCCeeecCCCCc-----------------------------ccccccccccccCccccccCCC----cC-
Q 040540 519 LRHG----HSSAPIIHCEGEDS-----------------------------VTQTTTMATIGYMAPEYGSEGI----VS- 560 (669)
Q Consensus 519 lh~~----~~~~~i~h~d~~~~-----------------------------~~~~~~~gt~~y~aPE~~~~~~----~~- 560 (669)
||-. ...|.|.|||+|.. ...+..+||-+|||||+++... +.
T Consensus 324 LH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fes 403 (513)
T KOG2052|consen 324 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFES 403 (513)
T ss_pred HHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhh
Confidence 9931 23688999999843 1234457999999999987632 22
Q ss_pred -ccccchhhHHHHHHHHhC----------CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHH
Q 040540 561 -AKCDVYSYGVLLMETFTR----------KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSI 629 (669)
Q Consensus 561 -~~~Dv~s~Gvil~el~tg----------~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (669)
..+||||||.|+||++-+ +.||.+.-..+-..-+. +..+- .+-+.|.+.. ....++++..+
T Consensus 404 yk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeM-rkVVC---v~~~RP~ipn----rW~s~~~l~~m 475 (513)
T KOG2052|consen 404 YKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEM-RKVVC---VQKLRPNIPN----RWKSDPALRVM 475 (513)
T ss_pred hhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHH-hccee---ecccCCCCCc----ccccCHHHHHH
Confidence 369999999999999653 35776543333222111 11110 0011121111 12245778889
Q ss_pred HHHHhhcccCCCCCCCCHHHHHHHHHHhHH
Q 040540 630 MDLALDCCMESPDKRMHMTDAAAKLKKIKV 659 (669)
Q Consensus 630 ~~l~~~c~~~~P~~Rps~~~v~~~l~~~~~ 659 (669)
.++|..||..+|+.|-|+--|.+.|.++.+
T Consensus 476 ~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 476 AKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred HHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 999999999999999999999999998875
No 299
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.85 E-value=1.8e-21 Score=200.61 Aligned_cols=131 Identities=17% Similarity=0.181 Sum_probs=105.9
Q ss_pred Cchhhhhhccccccccceecccccc--ccccceeeccCCCCChHHhhhcC--------CCccCHHHHHHHHHhHHhhhhh
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSN--PDFKALVLEFMPNGSLEKWLYSH--------NYFLDILERLNIMIDVGSALEY 518 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ey~~~g~L~~~l~~~--------~~~l~~~~~~~i~~~i~~~l~~ 518 (669)
...|+.+++.++|||++++++.+.. ....+++|||+. +++.+++... ...+++.....++.|++.|++|
T Consensus 45 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~ 123 (317)
T cd07868 45 ACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 123 (317)
T ss_pred HHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 4578999999999999999988744 455789999997 5888887531 2247888889999999999999
Q ss_pred hhcCCCCCCeeecCCCCccc--------------------------------ccccccccccCccccccC-CCcCccccc
Q 040540 519 LRHGHSSAPIIHCEGEDSVT--------------------------------QTTTMATIGYMAPEYGSE-GIVSAKCDV 565 (669)
Q Consensus 519 lh~~~~~~~i~h~d~~~~~~--------------------------------~~~~~gt~~y~aPE~~~~-~~~~~~~Dv 565 (669)
||. .+|+|||+|+... .....||+.|+|||++.+ ..++.++||
T Consensus 124 LH~----~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 199 (317)
T cd07868 124 LHA----NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDI 199 (317)
T ss_pred HHh----CCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhH
Confidence 994 4799999984310 012357889999999876 458999999
Q ss_pred hhhHHHHHHHHhCCCCCCc
Q 040540 566 YSYGVLLMETFTRKRPTDE 584 (669)
Q Consensus 566 ~s~Gvil~el~tg~~p~~~ 584 (669)
||+||++|||+||+.||..
T Consensus 200 wslG~il~el~~g~~~f~~ 218 (317)
T cd07868 200 WAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred HHHHHHHHHHHhCCCCccC
Confidence 9999999999999999964
No 300
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.85 E-value=1.7e-21 Score=200.80 Aligned_cols=174 Identities=20% Similarity=0.159 Sum_probs=131.3
Q ss_pred Cchhhhhhcccc-ccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 449 FDSECEVLRNVR-HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 449 ~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
+..|..++.... |++++.+.+++...+..++||||+++|+|.+++... ..+++.+...|+.+++.|++|||. .+
T Consensus 47 ~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~----~~ 121 (323)
T cd05615 47 TMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHR----RG 121 (323)
T ss_pred HHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 445666666665 567778888888888899999999999999999753 458899999999999999999994 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|||+|+.. ......||+.|+|||++.+..++.++|||||||++|||+||+.||
T Consensus 122 ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf 201 (323)
T cd05615 122 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 201 (323)
T ss_pred eeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCC
Confidence 9999998430 011224899999999998888999999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
..... ..+.+.+.... . . .+......+.+++.+|++.+|.+|++.
T Consensus 202 ~~~~~--~~~~~~i~~~~---~------~---------~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 202 DGEDE--DELFQSIMEHN---V------S---------YPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CCCCH--HHHHHHHHhCC---C------C---------CCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 75321 11111111110 0 0 011223456899999999999999975
No 301
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.85 E-value=1.8e-21 Score=196.38 Aligned_cols=181 Identities=20% Similarity=0.263 Sum_probs=136.9
Q ss_pred cCchhhhhhcccc---ccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 448 SFDSECEVLRNVR---HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 448 ~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
.+..|+..++.++ |+|++++++++......++||||+++++|.++++. ..+++.....++.++++|+.|||+
T Consensus 45 ~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~--- 119 (277)
T cd06917 45 DIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHK--- 119 (277)
T ss_pred HHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHh---
Confidence 4556777777776 99999999999888888999999999999999865 368899999999999999999995
Q ss_pred CCCeeecCCCCcc-------------------------cccccccccccCccccccCC-CcCccccchhhHHHHHHHHhC
Q 040540 525 SAPIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 525 ~~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg 578 (669)
.+++|+|+++.. ......|+..|+|||+..++ .++.++|||||||++|||++|
T Consensus 120 -~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g 198 (277)
T cd06917 120 -VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATG 198 (277)
T ss_pred -CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhC
Confidence 479999988430 01122478889999988654 478999999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+.||..... ..+... . .....+.+.. ...+..+.+++.+||+.||++||++.|+++
T Consensus 199 ~~p~~~~~~-----~~~~~~-~----~~~~~~~~~~--------~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 199 NPPYSDVDA-----FRAMML-I----PKSKPPRLED--------NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCCCCCCCh-----hhhhhc-c----ccCCCCCCCc--------ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 999865321 111100 0 0000011110 113456789999999999999999999976
No 302
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.85 E-value=3.6e-21 Score=194.29 Aligned_cols=173 Identities=17% Similarity=0.191 Sum_probs=130.4
Q ss_pred cccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCcc
Q 040540 458 NVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSV 537 (669)
Q Consensus 458 ~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~~ 537 (669)
..+|++++.+++.+...+..++||||+++|+|.+++... ..+++.....|+.|+++|++|||. .+++|+|+|+..
T Consensus 53 ~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~----~~ivH~dikp~N 127 (279)
T cd05633 53 TGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMHN----RFVVYRDLKPAN 127 (279)
T ss_pred hCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH----CCcCCCCCCHHH
Confidence 347899999999988888899999999999999999754 458999999999999999999995 479999998431
Q ss_pred -----------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHH
Q 040540 538 -----------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR 593 (669)
Q Consensus 538 -----------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~ 593 (669)
......||..|+|||.... ..++.++|||||||++|||++|+.||........
T Consensus 128 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--- 204 (279)
T cd05633 128 ILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--- 204 (279)
T ss_pred EEECCCCCEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH---
Confidence 0112248999999998864 5588999999999999999999999965322111
Q ss_pred HHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 040540 594 RWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM-----HMTDAAA 652 (669)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp-----s~~~v~~ 652 (669)
..+...... ....+ +......+.+++.+|+..||++|| +++|+++
T Consensus 205 ~~~~~~~~~-----~~~~~---------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 205 HEIDRMTLT-----VNVEL---------PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred HHHHHHhhc-----CCcCC---------ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 111111000 00011 123345678999999999999999 5888766
No 303
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.85 E-value=2.3e-21 Score=203.19 Aligned_cols=129 Identities=22% Similarity=0.192 Sum_probs=105.9
Q ss_pred cCchhhhhhccccccccceecccccccc------ccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhc
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPD------FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
.+..|+..+..++|+|++++++++.... ..++||||+++ ++.+.+.. .+++.....++.|+++||+|||.
T Consensus 66 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~ 141 (359)
T cd07876 66 RAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLHS 141 (359)
T ss_pred HHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHh
Confidence 4557888999999999999999875432 35899999974 67766643 36788888899999999999995
Q ss_pred CCCCCCeeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 522 GHSSAPIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
.+|+|||+|+.. ......||..|+|||++.+..++.++||||+||++|||+|
T Consensus 142 ----~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~t 217 (359)
T cd07876 142 ----AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVK 217 (359)
T ss_pred ----CCcccCCCCHHHEEECCCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHh
Confidence 479999998431 0112357899999999998889999999999999999999
Q ss_pred CCCCCCc
Q 040540 578 RKRPTDE 584 (669)
Q Consensus 578 g~~p~~~ 584 (669)
|+.||..
T Consensus 218 g~~pf~~ 224 (359)
T cd07876 218 GSVIFQG 224 (359)
T ss_pred CCCCCCC
Confidence 9999975
No 304
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.85 E-value=3.4e-21 Score=195.91 Aligned_cols=199 Identities=17% Similarity=0.195 Sum_probs=136.6
Q ss_pred CchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
+..|+..++.++|+|++++.+++..+...++||||++ +++.+++......+.+.....++.++++||.|||. .++
T Consensus 50 ~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~----~~i 124 (291)
T cd07870 50 AIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHG----QHI 124 (291)
T ss_pred HHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh----CCc
Confidence 4568889999999999999999988888899999996 78888876554567888888899999999999995 479
Q ss_pred eecCCCCcc-------------------------cccccccccccCccccccCC-CcCccccchhhHHHHHHHHhCCCCC
Q 040540 529 IHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 529 ~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+|+|+++.. ......++..|+|||+..+. .++.++|||||||++|||+||+.||
T Consensus 125 ~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f 204 (291)
T cd07870 125 LHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAF 204 (291)
T ss_pred ccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 999998431 01112368899999988653 4788999999999999999999999
Q ss_pred CcCCCCCccHHHHHH-HhCC------------CCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 583 DEMFTGEMSLRRWVK-ESLP------------HRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~-~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
.........+..... ...+ ...........................+.+++.+|++.||.+|||+.|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~ 284 (291)
T cd07870 205 PGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQD 284 (291)
T ss_pred CCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHH
Confidence 753321111111100 0000 000000000000000000000112356789999999999999999999
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
++.
T Consensus 285 ~l~ 287 (291)
T cd07870 285 ALL 287 (291)
T ss_pred Hhc
Confidence 864
No 305
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.85 E-value=4e-21 Score=195.07 Aligned_cols=199 Identities=20% Similarity=0.177 Sum_probs=140.5
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+..++.++|+|++++++.+...+..+++|||++++.+..+... ...+++.....++.++++|+.|||. .
T Consensus 45 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~----~ 119 (288)
T cd07833 45 KTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEAS-PGGLPPDAVRSYIWQLLQAIAYCHS----H 119 (288)
T ss_pred hHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 3566789999999999999999999888889999999998777665543 4558899999999999999999995 4
Q ss_pred CeeecCCCCcc--------------------------cccccccccccCccccccCC-CcCccccchhhHHHHHHHHhCC
Q 040540 527 PIIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 527 ~i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~ 579 (669)
+++|+|+++.. ......|+..|+|||++.+. .++.++||||||+++|||++|+
T Consensus 120 ~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~ 199 (288)
T cd07833 120 NIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGE 199 (288)
T ss_pred CeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCC
Confidence 79999988420 11123467889999999887 7899999999999999999999
Q ss_pred CCCCcCCCCCccHHHHHHH---hCCCCccccc--cc--------cc-cchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC
Q 040540 580 RPTDEMFTGEMSLRRWVKE---SLPHRLSEVV--DT--------NL-VREEQAFSAKMDCLLSIMDLALDCCMESPDKRM 645 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~---~~~~~~~~~~--~~--------~~-~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp 645 (669)
.||...... ..+ ..... ..+....... ++ .. .........+......+.+++.+||..+|++||
T Consensus 200 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 277 (288)
T cd07833 200 PLFPGDSDI-DQL-YLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERL 277 (288)
T ss_pred CCCCCCCHH-HHH-HHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcc
Confidence 998653211 101 00000 0000000000 00 00 000000011222367789999999999999999
Q ss_pred CHHHHHH
Q 040540 646 HMTDAAA 652 (669)
Q Consensus 646 s~~~v~~ 652 (669)
+++++++
T Consensus 278 s~~~il~ 284 (288)
T cd07833 278 TCDELLQ 284 (288)
T ss_pred cHHHHhc
Confidence 9999875
No 306
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.85 E-value=8.5e-22 Score=204.00 Aligned_cols=173 Identities=18% Similarity=0.112 Sum_probs=127.8
Q ss_pred hhhhhccc---cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 452 ECEVLRNV---RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 452 e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
|..++... .||+++++++.+......++||||+++|+|.+++... ..+++.....++.|+++|++|||. .+|
T Consensus 43 e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH~----~~i 117 (330)
T cd05586 43 ERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKE-GRFSEDRAKFYIAELVLALEHLHK----YDI 117 (330)
T ss_pred HHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH----CCe
Confidence 44444443 6999999999998889999999999999999998753 458888999999999999999994 479
Q ss_pred eecCCCCcc-------------------------cccccccccccCccccccCC-CcCccccchhhHHHHHHHHhCCCCC
Q 040540 529 IHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 529 ~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+|||+|+.. ......||..|+|||++.+. .++.++||||+||++|||+||+.||
T Consensus 118 vHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf 197 (330)
T cd05586 118 VYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPF 197 (330)
T ss_pred EeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCC
Confidence 999998420 01123589999999988764 4889999999999999999999998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMT 648 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~ 648 (669)
..... .+..+....... .+. .......+.+++.+|++.||.+||++.
T Consensus 198 ~~~~~-----~~~~~~i~~~~~------~~~--------~~~~~~~~~~li~~~L~~~P~~R~~~~ 244 (330)
T cd05586 198 YAEDT-----QQMYRNIAFGKV------RFP--------KNVLSDEGRQFVKGLLNRNPQHRLGAH 244 (330)
T ss_pred CCCCH-----HHHHHHHHcCCC------CCC--------CccCCHHHHHHHHHHcCCCHHHCCCCC
Confidence 65221 111111100000 000 011234567899999999999999543
No 307
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.85 E-value=3.3e-21 Score=195.76 Aligned_cols=182 Identities=19% Similarity=0.267 Sum_probs=140.8
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..++.++|+|++++++.+...+..+++|||+++++|.+++.. ..+++.....++.+++.|++|+|. .+
T Consensus 63 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~----~g 136 (292)
T cd06657 63 LLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLKALSVLHA----QG 136 (292)
T ss_pred HHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 466788899999999999999999988999999999999999998864 347888899999999999999995 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|+|+++.. ......|+..|+|||...+..++.++|||||||++|||++|+.||
T Consensus 137 ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~ 216 (292)
T cd06657 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216 (292)
T ss_pred eecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 9999988430 011124788899999988878899999999999999999999998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
... ........+....+..... .......+.+++.+||..+|.+||++.++++
T Consensus 217 ~~~--~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 217 FNE--PPLKAMKMIRDNLPPKLKN---------------LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred CCC--CHHHHHHHHHhhCCcccCC---------------cccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 642 1122222222222221111 1112335678999999999999999999987
No 308
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.85 E-value=4.9e-21 Score=194.76 Aligned_cols=199 Identities=16% Similarity=0.204 Sum_probs=137.6
Q ss_pred CchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
+..|+.+++.++|+|++++++++......++||||++ ++|.+++......+++.....++.++++|+.|||. .++
T Consensus 50 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~----~~i 124 (291)
T cd07844 50 AIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQ----RRV 124 (291)
T ss_pred HHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh----CCe
Confidence 4568999999999999999999998889999999998 59999997655678889999999999999999995 479
Q ss_pred eecCCCCcc-------------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCCCC
Q 040540 529 IHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 529 ~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+|+|+++.. ......++..|+|||+..+ ..++.++||||+||++|||++|+.||
T Consensus 125 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~ 204 (291)
T cd07844 125 LHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLF 204 (291)
T ss_pred ecccCCHHHEEEcCCCCEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCC
Confidence 999998420 0011236788999998865 45889999999999999999999998
Q ss_pred CcCCCCCccHHHHHHH--hC-CCCccccc------cc--cccchhhhhhh--hHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 583 DEMFTGEMSLRRWVKE--SL-PHRLSEVV------DT--NLVREEQAFSA--KMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~--~~-~~~~~~~~------~~--~~~~~~~~~~~--~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
.........+....+. .. +....... .. ........... .......+.+++.+|++.+|++|||+.|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e 284 (291)
T cd07844 205 PGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAE 284 (291)
T ss_pred CCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHH
Confidence 6532111111100000 00 00000000 00 00000000000 0011256789999999999999999999
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
+++
T Consensus 285 ~l~ 287 (291)
T cd07844 285 AMK 287 (291)
T ss_pred Hhc
Confidence 864
No 309
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.84 E-value=4e-21 Score=191.94 Aligned_cols=181 Identities=17% Similarity=0.174 Sum_probs=139.5
Q ss_pred CchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhc---CCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+..|..+++.++|||++++++++......++||||+++++|.+++.+ ....+++.....++.++++|+.|||.
T Consensus 49 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---- 124 (260)
T cd08222 49 ANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---- 124 (260)
T ss_pred HHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH----
Confidence 34577888999999999999999888888999999999999998864 34568999999999999999999994
Q ss_pred CCeeecCCCCccc------------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 526 APIIHCEGEDSVT------------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 526 ~~i~h~d~~~~~~------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
.+++|+|+++... .....|++.|+|||...+..++.++||||||+++|||++|+.|
T Consensus 125 ~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~ 204 (260)
T cd08222 125 RRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHA 204 (260)
T ss_pred cCccccCCChhheEeecCCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 4799999874310 0122378889999998877789999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+.... ............ .+.. +......+.+++.+||..+|++||++.|+++
T Consensus 205 ~~~~~-----~~~~~~~~~~~~-----~~~~---------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 205 FEGQN-----FLSVVLRIVEGP-----TPSL---------PETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred CCCcc-----HHHHHHHHHcCC-----CCCC---------cchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 85421 111111111100 0111 2234456789999999999999999999975
No 310
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.84 E-value=3.9e-21 Score=197.37 Aligned_cols=183 Identities=24% Similarity=0.257 Sum_probs=139.1
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..++.++|+|++++++++......++||||++ |++.+++......+++.++..++.+++.|+.|||. .
T Consensus 66 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~----~ 140 (313)
T cd06633 66 QDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS----H 140 (313)
T ss_pred HHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH----C
Confidence 345678889999999999999999998888999999996 68888887666678999999999999999999994 4
Q ss_pred CeeecCCCCcc---------------------cccccccccccCcccccc---CCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 527 PIIHCEGEDSV---------------------TQTTTMATIGYMAPEYGS---EGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 527 ~i~h~d~~~~~---------------------~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+++|+|+++.. ......|+..|+|||++. ...++.++|||||||++|||++|+.|+
T Consensus 141 gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~ 220 (313)
T cd06633 141 NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 220 (313)
T ss_pred CeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 79999988531 011234788999999874 355888999999999999999999998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
..... .......... .. +... .......+.+++.+||+.+|.+||++.++++
T Consensus 221 ~~~~~--~~~~~~~~~~---~~-----~~~~--------~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 221 FNMNA--MSALYHIAQN---DS-----PTLQ--------SNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred CCCCh--HHHHHHHHhc---CC-----CCCC--------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 65321 1111111110 00 0000 1112234788999999999999999999986
No 311
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.84 E-value=3.2e-21 Score=199.78 Aligned_cols=187 Identities=17% Similarity=0.193 Sum_probs=136.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|...+...+|++++++++.+......++||||+++|+|.+++++....+++.....++.+++.|++|||. .+
T Consensus 47 ~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~----~~ 122 (332)
T cd05623 47 CFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQ----LH 122 (332)
T ss_pred HHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 35567888888999999999999998889999999999999999998655668888888999999999999995 47
Q ss_pred eeecCCCCcc--------------------------cccccccccccCcccccc-----CCCcCccccchhhHHHHHHHH
Q 040540 528 IIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGS-----EGIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 528 i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~el~ 576 (669)
++|||+|+.. ......||+.|+|||++. ...++.++|||||||++|||+
T Consensus 123 iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell 202 (332)
T cd05623 123 YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEML 202 (332)
T ss_pred eEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHh
Confidence 9999999430 001135899999999875 345889999999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCC--CCCHHHHHHH
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDK--RMHMTDAAAK 653 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~--Rps~~~v~~~ 653 (669)
+|+.||.... ..+......... .+. ... .........+.+++.+|+..+|.+ |+++.|+++-
T Consensus 203 ~g~~Pf~~~~-----~~~~~~~i~~~~-~~~---~~p------~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 203 YGETPFYAES-----LVETYGKIMNHK-ERF---QFP------AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred cCCCCCCCCC-----HHHHHHHHhCCC-ccc---cCC------CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 9999996521 111111111000 000 000 001223456778888887655443 6888888654
No 312
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.84 E-value=9.6e-22 Score=189.91 Aligned_cols=198 Identities=21% Similarity=0.222 Sum_probs=140.2
Q ss_pred Cchhhhhhccccccccceeccccccc--c---ccceeeccCCCCChHHhhhc---CCCccCHHHHHHHHHhHHhhhhhhh
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNP--D---FKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLR 520 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~--~---~~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh 520 (669)
-..|..+|+.++|||||+++.++... . ...+||||||. +|++.++. .+..++.....-++.|+.+|+.|||
T Consensus 64 knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh 142 (364)
T KOG0658|consen 64 KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH 142 (364)
T ss_pred CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH
Confidence 34689999999999999998877542 2 34689999994 99999984 2456788888889999999999999
Q ss_pred cCCCCCCeeecCCCCcc-------------------------cccccccccccCccccccCC-CcCccccchhhHHHHHH
Q 040540 521 HGHSSAPIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLME 574 (669)
Q Consensus 521 ~~~~~~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~e 574 (669)
. .+|+|||+|+.. ...+..-|..|.|||.+.+. .|+.+.||||.|||+.|
T Consensus 143 ~----~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aE 218 (364)
T KOG0658|consen 143 S----HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAE 218 (364)
T ss_pred h----cCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHH
Confidence 4 589999999641 11233467899999998875 49999999999999999
Q ss_pred HHhCCCCCCcCCCCCccHHHHHHHhC-CCC---------ccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCC
Q 040540 575 TFTRKRPTDEMFTGEMSLRRWVKESL-PHR---------LSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644 (669)
Q Consensus 575 l~tg~~p~~~~~~~~~~l~~~~~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~R 644 (669)
|+-|++-|.+. .+..++...++..- |.+ ..+.-.+.+....-..-......++..+++.++++.+|.+|
T Consensus 219 Ll~g~plFpG~-s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R 297 (364)
T KOG0658|consen 219 LLKGQPLFPGD-SSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKR 297 (364)
T ss_pred HhcCCcccCCC-CHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhc
Confidence 99999887652 22233333322111 110 00111122222110000123455678899999999999999
Q ss_pred CCHHHHHH
Q 040540 645 MHMTDAAA 652 (669)
Q Consensus 645 ps~~~v~~ 652 (669)
.++.|++.
T Consensus 298 ~~~~~~l~ 305 (364)
T KOG0658|consen 298 LSALEALA 305 (364)
T ss_pred CCHHHHhc
Confidence 99998875
No 313
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.84 E-value=3.8e-21 Score=199.03 Aligned_cols=133 Identities=20% Similarity=0.249 Sum_probs=112.8
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|..++...+|++++.+++++......++||||+++|+|.+++.+....+++.....++.|++.|++|||. .+
T Consensus 47 ~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~----~~ 122 (331)
T cd05597 47 CFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQ----LG 122 (331)
T ss_pred HHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 35668888888999999999999999999999999999999999997655568888899999999999999994 47
Q ss_pred eeecCCCCcc-----------------------c---ccccccccccCccccccC-----CCcCccccchhhHHHHHHHH
Q 040540 528 IIHCEGEDSV-----------------------T---QTTTMATIGYMAPEYGSE-----GIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 528 i~h~d~~~~~-----------------------~---~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~Gvil~el~ 576 (669)
|+|||+|+.. . .....||+.|||||++.. ..++.++|||||||++|||+
T Consensus 123 ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~ 202 (331)
T cd05597 123 YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEML 202 (331)
T ss_pred eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHh
Confidence 9999998420 0 011248999999998863 45788999999999999999
Q ss_pred hCCCCCCc
Q 040540 577 TRKRPTDE 584 (669)
Q Consensus 577 tg~~p~~~ 584 (669)
+|+.||..
T Consensus 203 ~g~~Pf~~ 210 (331)
T cd05597 203 YGETPFYA 210 (331)
T ss_pred hCCCCCCC
Confidence 99999865
No 314
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.84 E-value=6.9e-21 Score=192.80 Aligned_cols=198 Identities=19% Similarity=0.153 Sum_probs=142.4
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..++.++|++++++++.+......++++||++ +++.+++......+++..+..++.++++|+.|||. .+
T Consensus 44 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~----~~ 118 (283)
T cd05118 44 TALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD-TDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHS----HG 118 (283)
T ss_pred HHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC-CCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 45568889999999999999999998899999999998 48998887655678999999999999999999995 47
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCC-CcCccccchhhHHHHHHHHhCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
++|+|+++.. ......++..|+|||...+. .++.++||||+|+++|||+||+.|
T Consensus 119 i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~ 198 (283)
T cd05118 119 ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPL 198 (283)
T ss_pred eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCC
Confidence 9999988431 01123477789999998776 688999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCC----Ccccccc------ccccc--hhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPH----RLSEVVD------TNLVR--EEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~----~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
|..... ............. .+....+ ..... ..............+.+++.+||+.||.+||++++
T Consensus 199 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ 276 (283)
T cd05118 199 FPGKSE--IDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQ 276 (283)
T ss_pred CCCCCH--HHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHH
Confidence 865321 1111111111100 0000000 00000 00000112345678899999999999999999999
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
++.
T Consensus 277 ll~ 279 (283)
T cd05118 277 ALA 279 (283)
T ss_pred Hhh
Confidence 975
No 315
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.84 E-value=2.8e-21 Score=202.30 Aligned_cols=196 Identities=19% Similarity=0.155 Sum_probs=134.2
Q ss_pred cCchhhhhhccccccccceeccccccc------cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhc
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNP------DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
.+..|+..++.++|+|++++++.+... ...++||||++ +++.+.+.. .+++.....++.|+++||+|||.
T Consensus 62 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~ 137 (355)
T cd07874 62 RAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS 137 (355)
T ss_pred HHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhc-ccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHh
Confidence 455688889999999999999887543 24589999997 467777753 37888888999999999999994
Q ss_pred CCCCCCeeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 522 GHSSAPIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
.+++|||+|+.. ......||..|+|||++.+..++.++|||||||++|||++
T Consensus 138 ----~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 213 (355)
T cd07874 138 ----AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 213 (355)
T ss_pred ----CCcccCCCChHHEEECCCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHh
Confidence 489999998531 0112358899999999988889999999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHh----------CCCCccccc----------cccccchh---hhhhhhHHHHHHHHHHHh
Q 040540 578 RKRPTDEMFTGEMSLRRWVKES----------LPHRLSEVV----------DTNLVREE---QAFSAKMDCLLSIMDLAL 634 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~----------~~~~~~~~~----------~~~~~~~~---~~~~~~~~~~~~~~~l~~ 634 (669)
|+.||....... .+...+... ........+ .+...... ............+.+++.
T Consensus 214 g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 292 (355)
T cd07874 214 HKILFPGRDYID-QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLS 292 (355)
T ss_pred CCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHH
Confidence 999986522100 000000000 000000000 00000000 000011123456789999
Q ss_pred hcccCCCCCCCCHHHHHH
Q 040540 635 DCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 635 ~c~~~~P~~Rps~~~v~~ 652 (669)
+|++.||++|||+.|+++
T Consensus 293 ~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 293 KMLVIDPAKRISVDEALQ 310 (355)
T ss_pred HHhcCCchhcCCHHHHhc
Confidence 999999999999999987
No 316
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.84 E-value=3.1e-21 Score=195.88 Aligned_cols=194 Identities=21% Similarity=0.226 Sum_probs=132.3
Q ss_pred hhhhhhcc---ccccccceecccccc-----ccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhc
Q 040540 451 SECEVLRN---VRHRNLIKIISSCSN-----PDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 451 ~e~~~l~~---l~h~niv~l~~~~~~-----~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
.|+..+.. ++|+|++++++++.. ....+++|||++ +++.+++.... ..+++.....++.|++.|+.|+|.
T Consensus 48 ~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~ 126 (288)
T cd07863 48 REVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHA 126 (288)
T ss_pred HHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 45555544 479999999988754 234689999998 58988887532 347899999999999999999995
Q ss_pred CCCCCCeeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 522 GHSSAPIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
.+++|+|+|+.. ......||..|+|||++.+..++.++||||+||++|||++
T Consensus 127 ----~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~ 202 (288)
T cd07863 127 ----NCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 202 (288)
T ss_pred ----CCeecCCCCHHHEEECCCCCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHh
Confidence 479999998531 0112347889999999988889999999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHh-CCC--Cccc-------cccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKES-LPH--RLSE-------VVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~-~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
|+.||..... ...+....... .+. .+.. ...+...... .....+....+.+++.+|++.||++|||+
T Consensus 203 g~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 279 (288)
T cd07863 203 RKPLFCGNSE-ADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPV--QSVVPEIEESGAQLLLEMLTFNPHKRISA 279 (288)
T ss_pred CCcCcCCCCH-HHHHHHHHHHhCCCChhhCcccccccccccCCCCCCch--HHhCcCcCHHHHHHHHHHhccCcccCCCH
Confidence 9999864321 11111111110 000 0000 0000000000 00012334567899999999999999999
Q ss_pred HHHHH
Q 040540 648 TDAAA 652 (669)
Q Consensus 648 ~~v~~ 652 (669)
.|++.
T Consensus 280 ~~~l~ 284 (288)
T cd07863 280 FRALQ 284 (288)
T ss_pred HHHhc
Confidence 99874
No 317
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.84 E-value=5e-22 Score=208.25 Aligned_cols=132 Identities=20% Similarity=0.268 Sum_probs=114.7
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|..++..++|++++++++.+......++||||+++|+|.+++.+. ..+++.....++.+++.|++|||. .+
T Consensus 47 ~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~----~g 121 (360)
T cd05627 47 HIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQ----LG 121 (360)
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 4556888899999999999999999889999999999999999999753 458888899999999999999994 58
Q ss_pred eeecCCCCcc--------------c----------------------------------------------ccccccccc
Q 040540 528 IIHCEGEDSV--------------T----------------------------------------------QTTTMATIG 547 (669)
Q Consensus 528 i~h~d~~~~~--------------~----------------------------------------------~~~~~gt~~ 547 (669)
|+|||+|+.. . ..+.+||+.
T Consensus 122 ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 201 (360)
T cd05627 122 FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPD 201 (360)
T ss_pred eEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCcc
Confidence 9999998430 0 012358999
Q ss_pred cCccccccCCCcCccccchhhHHHHHHHHhCCCCCCc
Q 040540 548 YMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE 584 (669)
Q Consensus 548 y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 584 (669)
|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 202 Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 202 YIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred ccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 9999999988899999999999999999999999975
No 318
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.84 E-value=3.8e-21 Score=201.94 Aligned_cols=194 Identities=18% Similarity=0.122 Sum_probs=134.6
Q ss_pred cCchhhhhhccccccccceeccccccc------cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhc
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNP------DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
.+..|+..++.++|+|++++++.+... ...++||||++ +++.+++.. .+++.....++.|+++||+|||.
T Consensus 69 ~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~ 144 (364)
T cd07875 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS 144 (364)
T ss_pred HHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCC-CCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhh
Confidence 455688899999999999999876543 24689999997 578777753 37888888999999999999994
Q ss_pred CCCCCCeeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 522 GHSSAPIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
.+|+|||+|+.. ......||..|+|||++.+..++.++|||||||++|||++
T Consensus 145 ----~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~ 220 (364)
T cd07875 145 ----AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220 (364)
T ss_pred ----CCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHh
Confidence 489999999530 0122358999999999988889999999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCC-----------ccccc--------------cccccchhhhhhhhHHHHHHHHHH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHR-----------LSEVV--------------DTNLVREEQAFSAKMDCLLSIMDL 632 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~-----------~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~l 632 (669)
|+.||...... ..+...+ ...... +...+ .+..... ............+.++
T Consensus 221 g~~pf~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dl 297 (364)
T cd07875 221 GGVLFPGTDHI-DQWNKVI-EQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFP-ADSEHNKLKASQARDL 297 (364)
T ss_pred CCCCCCCCCHH-HHHHHHH-HhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCcccccc-ccccccccccHHHHHH
Confidence 99999653210 0011110 000000 00000 0000000 0000011223467899
Q ss_pred HhhcccCCCCCCCCHHHHHH
Q 040540 633 ALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 633 ~~~c~~~~P~~Rps~~~v~~ 652 (669)
+.+|++.||.+|||+.|+++
T Consensus 298 l~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 298 LSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HHHhcCcCcccCCCHHHHhc
Confidence 99999999999999999986
No 319
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.84 E-value=2.4e-21 Score=192.38 Aligned_cols=185 Identities=24% Similarity=0.267 Sum_probs=142.9
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+..++.++|++++++++.+......++++||+++++|.+++......+++.....++.++++|+.|||. .
T Consensus 42 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~----~ 117 (253)
T cd05122 42 EKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHS----N 117 (253)
T ss_pred HHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhc----C
Confidence 456678999999999999999999988888999999999999999998654578999999999999999999995 5
Q ss_pred CeeecCCCCcc---------------------c---ccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 527 PIIHCEGEDSV---------------------T---QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 527 ~i~h~d~~~~~---------------------~---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+++|+|+++.. . .....|+..|+|||......++.++||||||++++||++|+.|+
T Consensus 118 ~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~ 197 (253)
T cd05122 118 GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPY 197 (253)
T ss_pred CEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence 79999988431 0 12234788999999998888899999999999999999999998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
..... ........... ..... ........+.+++.+||+.||++|||+.|+++
T Consensus 198 ~~~~~--~~~~~~~~~~~---~~~~~------------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 198 SELPP--MKALFKIATNG---PPGLR------------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CCCch--HHHHHHHHhcC---CCCcC------------cccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 65311 11111111100 00000 01112356789999999999999999999875
No 320
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.84 E-value=1.6e-21 Score=200.75 Aligned_cols=184 Identities=22% Similarity=0.264 Sum_probs=140.3
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+.+..|...+..++|++++++++.+......+++|||+.+++|.+++... +..+++.....++.++++|++|||.
T Consensus 46 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---- 121 (316)
T cd05574 46 KRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHL---- 121 (316)
T ss_pred HHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHH----
Confidence 34667888999999999999999998888899999999999999999753 3568889999999999999999994
Q ss_pred CCeeecCCCCccc------------------------------------------------------ccccccccccCcc
Q 040540 526 APIIHCEGEDSVT------------------------------------------------------QTTTMATIGYMAP 551 (669)
Q Consensus 526 ~~i~h~d~~~~~~------------------------------------------------------~~~~~gt~~y~aP 551 (669)
.+++|+|+++... .....||..|+||
T Consensus 122 ~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aP 201 (316)
T cd05574 122 LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAP 201 (316)
T ss_pred CCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCH
Confidence 4799999984200 0012478889999
Q ss_pred ccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHH
Q 040540 552 EYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMD 631 (669)
Q Consensus 552 E~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (669)
|+..+..++.++||||||+++|||++|+.||....... .+.... ..... .+........+.+
T Consensus 202 E~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~~~----~~~~~-------------~~~~~~~~~~~~~ 263 (316)
T cd05574 202 EVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE-TFSNIL----KKEVT-------------FPGSPPVSSSARD 263 (316)
T ss_pred HHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH-HHHHHh----cCCcc-------------CCCccccCHHHHH
Confidence 99988889999999999999999999999986532211 111100 00000 0011124567889
Q ss_pred HHhhcccCCCCCCCC----HHHHHH
Q 040540 632 LALDCCMESPDKRMH----MTDAAA 652 (669)
Q Consensus 632 l~~~c~~~~P~~Rps----~~~v~~ 652 (669)
++.+||+.+|++||+ ++|+++
T Consensus 264 li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 264 LIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HHHHHccCCHhHCCCchhhHHHHHc
Confidence 999999999999999 555544
No 321
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.84 E-value=6.6e-22 Score=186.17 Aligned_cols=190 Identities=19% Similarity=0.241 Sum_probs=148.6
Q ss_pred cCchhhhhhcccc-ccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVR-HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
...+|++++..++ |+||+.++.++.++...|+|||-|.+|+|...|.++ ..+.+.+...+..+||.||+|||. +
T Consensus 121 RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~-~~F~E~EAs~vvkdia~aLdFlH~----k 195 (463)
T KOG0607|consen 121 RVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKR-KHFNEREASRVVKDIASALDFLHT----K 195 (463)
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHh-hhccHHHHHHHHHHHHHHHHHHhh----c
Confidence 4557889888884 999999999999999999999999999999999864 457888999999999999999995 4
Q ss_pred CeeecCCCCc-----------------------------------ccccccccccccCcccccc-----CCCcCccccch
Q 040540 527 PIIHCEGEDS-----------------------------------VTQTTTMATIGYMAPEYGS-----EGIVSAKCDVY 566 (669)
Q Consensus 527 ~i~h~d~~~~-----------------------------------~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~ 566 (669)
+|.|||+|+. ....+.+|+..|||||+.. ...|+.++|.|
T Consensus 196 gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlw 275 (463)
T KOG0607|consen 196 GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLW 275 (463)
T ss_pred CcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHH
Confidence 8999999943 0122346889999999753 24599999999
Q ss_pred hhHHHHHHHHhCCCCCCcCCCCCc---------cHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcc
Q 040540 567 SYGVLLMETFTRKRPTDEMFTGEM---------SLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCC 637 (669)
Q Consensus 567 s~Gvil~el~tg~~p~~~~~~~~~---------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~ 637 (669)
|+|||+|-|++|-+||.+...++- .-+.-+-+.+++...+.- ...|.+.+....+++...+
T Consensus 276 SLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFP----------dkdWahIS~eakdlisnLl 345 (463)
T KOG0607|consen 276 SLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFP----------DKDWAHISSEAKDLISNLL 345 (463)
T ss_pred HHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCC----------hhhhHHhhHHHHHHHHHHH
Confidence 999999999999999976544321 011112222222222211 1247788999999999999
Q ss_pred cCCCCCCCCHHHHHH
Q 040540 638 MESPDKRMHMTDAAA 652 (669)
Q Consensus 638 ~~~P~~Rps~~~v~~ 652 (669)
.++|.+|-++.+|++
T Consensus 346 vrda~~rlsa~~vln 360 (463)
T KOG0607|consen 346 VRDAKQRLSAAQVLN 360 (463)
T ss_pred hccHHhhhhhhhccC
Confidence 999999999998876
No 322
>PTZ00284 protein kinase; Provisional
Probab=99.84 E-value=3.5e-21 Score=208.65 Aligned_cols=196 Identities=18% Similarity=0.194 Sum_probs=131.3
Q ss_pred chhhhhhccccc------cccceeccccccc-cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcC
Q 040540 450 DSECEVLRNVRH------RNLIKIISSCSNP-DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHG 522 (669)
Q Consensus 450 ~~e~~~l~~l~h------~niv~l~~~~~~~-~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~ 522 (669)
..|+..+..++| .+++.+++++... ...++|||++ +++|.+++.+. ..+++.....|+.|++.||+|||+.
T Consensus 173 ~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~ 250 (467)
T PTZ00284 173 KIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTE 250 (467)
T ss_pred HHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 345555555544 4577777777653 4678999988 67899998754 4688999999999999999999942
Q ss_pred CCCCCeeecCCCCccc--------------------------------------ccccccccccCccccccCCCcCcccc
Q 040540 523 HSSAPIIHCEGEDSVT--------------------------------------QTTTMATIGYMAPEYGSEGIVSAKCD 564 (669)
Q Consensus 523 ~~~~~i~h~d~~~~~~--------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~D 564 (669)
.+|+|||+|+... ....+||+.|||||++.+..|+.++|
T Consensus 251 ---~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~D 327 (467)
T PTZ00284 251 ---LHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTD 327 (467)
T ss_pred ---CCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHH
Confidence 4799999995310 11235899999999999988999999
Q ss_pred chhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHh---CCCCcc---------ccc------cccccchh-h-----hhh
Q 040540 565 VYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKES---LPHRLS---------EVV------DTNLVREE-Q-----AFS 620 (669)
Q Consensus 565 v~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~---~~~~~~---------~~~------~~~~~~~~-~-----~~~ 620 (669)
||||||++|||+||+.||..... ......+... ++..+. ++. .+...... . ...
T Consensus 328 iwSlGvil~elltG~~pf~~~~~--~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T PTZ00284 328 MWSMGCIIYELYTGKLLYDTHDN--LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPV 405 (467)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccch
Confidence 99999999999999999975321 1111111111 010000 000 00000000 0 000
Q ss_pred hhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 621 AKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 621 ~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
........+.+++.+|++.||.+|||++|+++
T Consensus 406 ~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 406 REVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred hhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 00112346789999999999999999999986
No 323
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.84 E-value=4.3e-21 Score=191.53 Aligned_cols=183 Identities=23% Similarity=0.248 Sum_probs=141.5
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..++.++|||++++++.+......++|+||+++++|.+++... ..+++.....++.++++|+.|||. .
T Consensus 45 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~----~ 119 (258)
T cd05578 45 RNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHS----K 119 (258)
T ss_pred HHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHh----C
Confidence 45667889999999999999999999888999999999999999999754 568899999999999999999994 4
Q ss_pred CeeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 527 PIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 527 ~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+++|+|+++.. ......|+..|+|||+.....++.++||||||+++|||++|+.||
T Consensus 120 ~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~ 199 (258)
T cd05578 120 GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPY 199 (258)
T ss_pred CeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCC
Confidence 79999988431 011234788999999998888999999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH--HHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM--TDAA 651 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~--~~v~ 651 (669)
...... ...+....... .... .+...+..+.+++.+||..||.+||++ +|++
T Consensus 200 ~~~~~~---~~~~~~~~~~~-~~~~-------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 200 RGHSRT---IRDQIRAKQET-ADVL-------------YPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred CCCCcc---HHHHHHHHhcc-cccc-------------CcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 764321 11111111110 0000 012233567899999999999999999 5553
No 324
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.84 E-value=5.7e-21 Score=194.47 Aligned_cols=198 Identities=19% Similarity=0.117 Sum_probs=137.5
Q ss_pred cCchhhhhhccccccccceeccccccc--cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNP--DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
.+..|+..+..++|+|++++++++... ...++||||++ ++|.+++......+++.....++.|+++||+|||.
T Consensus 50 ~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---- 124 (293)
T cd07843 50 TSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHD---- 124 (293)
T ss_pred hHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH----
Confidence 345688899999999999999988776 78899999998 59999987655568999999999999999999995
Q ss_pred CCeeecCCCCcc-------------------------cccccccccccCccccccCCC-cCccccchhhHHHHHHHHhCC
Q 040540 526 APIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGI-VSAKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 526 ~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gvil~el~tg~ 579 (669)
.+++|+|+++.. ......+++.|+|||.+.+.. ++.++||||+|+++|||++|+
T Consensus 125 ~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 204 (293)
T cd07843 125 NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKK 204 (293)
T ss_pred CCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCC
Confidence 479999988430 011234678899999886644 689999999999999999999
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCC----cc------c---cccccccchhhhhhhhHH-HHHHHHHHHhhcccCCCCCCC
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHR----LS------E---VVDTNLVREEQAFSAKMD-CLLSIMDLALDCCMESPDKRM 645 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~----~~------~---~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~c~~~~P~~Rp 645 (669)
.||...... ....-+....... +. . ...............+.. ....+.+++.+|++.+|++||
T Consensus 205 ~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~ 282 (293)
T cd07843 205 PLFPGKSEI--DQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRI 282 (293)
T ss_pred CCCCCCChH--HHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccC
Confidence 998653211 1110000000000 00 0 000000000000000111 245678999999999999999
Q ss_pred CHHHHHH
Q 040540 646 HMTDAAA 652 (669)
Q Consensus 646 s~~~v~~ 652 (669)
|+.|+++
T Consensus 283 t~~ell~ 289 (293)
T cd07843 283 SAEDALK 289 (293)
T ss_pred CHHHHhc
Confidence 9999975
No 325
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.84 E-value=1e-21 Score=181.14 Aligned_cols=180 Identities=20% Similarity=0.210 Sum_probs=136.0
Q ss_pred hhhhcccc-ccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeec
Q 040540 453 CEVLRNVR-HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHC 531 (669)
Q Consensus 453 ~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~ 531 (669)
..++.+.. +|.||+.+|++..+..+++.||.|. ..+..+++.-..++++.-.-++...+.+||.||... .+||||
T Consensus 141 ldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeK---H~viHR 216 (391)
T KOG0983|consen 141 LDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEK---HGVIHR 216 (391)
T ss_pred hhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHh---cceeec
Confidence 33444443 7999999999999999999999985 456666666566778777788999999999999864 589999
Q ss_pred CCCCc------------------------ccccccccccccCccccccC---CCcCccccchhhHHHHHHHHhCCCCCCc
Q 040540 532 EGEDS------------------------VTQTTTMATIGYMAPEYGSE---GIVSAKCDVYSYGVLLMETFTRKRPTDE 584 (669)
Q Consensus 532 d~~~~------------------------~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 584 (669)
|+|++ ...+...|-+.|||||-+.- .+|+-++|||||||+++|++||+.||..
T Consensus 217 DvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~ 296 (391)
T KOG0983|consen 217 DVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKG 296 (391)
T ss_pred ccCccceEEccCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCC
Confidence 99965 22344568999999998864 4589999999999999999999999987
Q ss_pred CCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 585 MFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 585 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
-..+...+...+... |. . .+.....+.++++++..|+.+|+.+||...++++
T Consensus 297 c~tdFe~ltkvln~e-PP--------~-------L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 297 CKTDFEVLTKVLNEE-PP--------L-------LPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred CCccHHHHHHHHhcC-CC--------C-------CCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 444433333322211 11 1 1112235677899999999999999999888765
No 326
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.84 E-value=9.5e-21 Score=195.21 Aligned_cols=132 Identities=17% Similarity=0.192 Sum_probs=105.7
Q ss_pred cCchhhhhhccccccccceecccccc--ccccceeeccCCCCChHHhhhcC--------CCccCHHHHHHHHHhHHhhhh
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSN--PDFKALVLEFMPNGSLEKWLYSH--------NYFLDILERLNIMIDVGSALE 517 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ey~~~g~L~~~l~~~--------~~~l~~~~~~~i~~~i~~~l~ 517 (669)
.+..|+.++..++|+|++++++++.. +...++||||++ +++.+++... ...+++.....++.|++.||+
T Consensus 44 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~ 122 (317)
T cd07867 44 SACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIH 122 (317)
T ss_pred HHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHH
Confidence 35578999999999999999998743 456789999987 5788877421 224788888899999999999
Q ss_pred hhhcCCCCCCeeecCCCCccc--------------------------------ccccccccccCccccccC-CCcCcccc
Q 040540 518 YLRHGHSSAPIIHCEGEDSVT--------------------------------QTTTMATIGYMAPEYGSE-GIVSAKCD 564 (669)
Q Consensus 518 ~lh~~~~~~~i~h~d~~~~~~--------------------------------~~~~~gt~~y~aPE~~~~-~~~~~~~D 564 (669)
|||. .+++|||+|+... .....||+.|+|||++.+ ..++.++|
T Consensus 123 ~lH~----~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~D 198 (317)
T cd07867 123 YLHA----NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAID 198 (317)
T ss_pred HHHh----CCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHH
Confidence 9994 4799999984310 011247889999998876 45899999
Q ss_pred chhhHHHHHHHHhCCCCCCc
Q 040540 565 VYSYGVLLMETFTRKRPTDE 584 (669)
Q Consensus 565 v~s~Gvil~el~tg~~p~~~ 584 (669)
||||||++|||+||+.||..
T Consensus 199 iwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 199 IWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred HHhHHHHHHHHHhCCCCccc
Confidence 99999999999999999864
No 327
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.84 E-value=1.8e-21 Score=179.21 Aligned_cols=192 Identities=22% Similarity=0.335 Sum_probs=143.7
Q ss_pred cccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
.++|..|+-.++...|||+..++++|..+....++..|||.|+|+..+++.. ..++..+.++++.++|+|++|||.-.
T Consensus 231 srdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsle- 309 (448)
T KOG0195|consen 231 SRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE- 309 (448)
T ss_pred cchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-
Confidence 4689999999999999999999999999988899999999999999999743 35677899999999999999999542
Q ss_pred CCCeeec---CC------------------CCcccccccccccccCccccccCCCc---CccccchhhHHHHHHHHhCCC
Q 040540 525 SAPIIHC---EG------------------EDSVTQTTTMATIGYMAPEYGSEGIV---SAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 525 ~~~i~h~---d~------------------~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~Dv~s~Gvil~el~tg~~ 580 (669)
+++-+ +. |-+.......-.+.||+||.+....- -.++|+|||+|++||+.|+..
T Consensus 310 --p~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trev 387 (448)
T KOG0195|consen 310 --PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREV 387 (448)
T ss_pred --hhhhhhhcccceEEecchhhhheecccceeeeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccc
Confidence 23221 11 11111222235789999999877553 358999999999999999999
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIK 658 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~ 658 (669)
||.+...-+..+.-.+ +.++--+ ++.....+.+++.-|.++||.+||.+..|+-.|++..
T Consensus 388 pfadlspmecgmkial-----eglrv~i-------------ppgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 388 PFADLSPMECGMKIAL-----EGLRVHI-------------PPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ccccCCchhhhhhhhh-----ccccccC-------------CCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 9987543332222111 1111112 2334456788999999999999999999999888753
No 328
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.84 E-value=6.2e-21 Score=191.20 Aligned_cols=182 Identities=19% Similarity=0.211 Sum_probs=135.7
Q ss_pred ccCchhhhhhccccccccceeccccccc--cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNP--DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
+.+..|+..+..++|+|++++++++... ...+++|||+++++|.+++.+. ..+++....+++.+++.|++|||.
T Consensus 49 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~--- 124 (265)
T cd06652 49 NALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHS--- 124 (265)
T ss_pred HHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh---
Confidence 3566788999999999999999987653 4567899999999999999754 347888889999999999999995
Q ss_pred CCCeeecCCCCcc----------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHH
Q 040540 525 SAPIIHCEGEDSV----------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 525 ~~~i~h~d~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~ 576 (669)
.+++|+|+++.. ......|+..|+|||...+..++.++|||||||++|||+
T Consensus 125 -~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 203 (265)
T cd06652 125 -NMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEML 203 (265)
T ss_pred -CCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHh
Confidence 479999988420 011124788999999998888899999999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+|+.||..... ........... . .+. .+......+.+++.+|+. +|++||+++|+++
T Consensus 204 ~g~~p~~~~~~----~~~~~~~~~~~-~----~~~---------~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 204 TEKPPWAEFEA----MAAIFKIATQP-T----NPV---------LPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred hCCCCCCccch----HHHHHHHhcCC-C----CCC---------CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 99999864211 11111111000 0 010 122344567788999985 9999999999875
No 329
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.84 E-value=6e-21 Score=190.72 Aligned_cols=178 Identities=17% Similarity=0.110 Sum_probs=133.2
Q ss_pred ccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCc
Q 040540 457 RNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS 536 (669)
Q Consensus 457 ~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~ 536 (669)
...+|+|++++++.+...+..++|+||+++++|.+++... ..+++.....++.|+++|+.|+|. .+++|+|+++.
T Consensus 52 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~----~~i~H~dl~p~ 126 (260)
T cd05611 52 IQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQ----RGIIHRDIKPE 126 (260)
T ss_pred hcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CCeecCCCCHH
Confidence 4458999999999998888999999999999999999753 457888899999999999999994 47999998853
Q ss_pred cc---------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHH
Q 040540 537 VT---------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRW 595 (669)
Q Consensus 537 ~~---------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~ 595 (669)
.. .....|+..|+|||...+..++.++||||||+++|||+||+.||..... ..+..-
T Consensus 127 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~ 204 (260)
T cd05611 127 NLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP--DAVFDN 204 (260)
T ss_pred HeEECCCCcEEEeecccceeccccccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH--HHHHHH
Confidence 10 1122478899999999887789999999999999999999999865321 111111
Q ss_pred HHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHH
Q 040540 596 VKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLK 655 (669)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~ 655 (669)
...... ... ... .......+.+++.+||+.+|++||++.++.+.+.
T Consensus 205 ~~~~~~-~~~----~~~---------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 205 ILSRRI-NWP----EEV---------KEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred HHhccc-CCC----Ccc---------cccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 110000 000 000 1123456789999999999999998876655443
No 330
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.84 E-value=7.6e-21 Score=191.82 Aligned_cols=182 Identities=18% Similarity=0.179 Sum_probs=137.3
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|+.+++.++|||++++++.+...+..++||||+++++|.+++.+.. ..+++..+..++.++++|+.|||. .
T Consensus 39 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~----~ 114 (277)
T cd05577 39 MALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQ----R 114 (277)
T ss_pred HHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 44568899999999999999999988888999999999999999997643 358899999999999999999995 4
Q ss_pred CeeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 527 PIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 527 ~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+++|+|+++.. ......|+..|+|||+..+..++.++|||||||++|||++|+.||
T Consensus 115 ~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~ 194 (277)
T cd05577 115 RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPF 194 (277)
T ss_pred CcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCC
Confidence 79999988431 011124678899999988888999999999999999999999998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
....... . ...+........ . ..+......+.+++.+||+.+|++||+.++
T Consensus 195 ~~~~~~~-~-~~~~~~~~~~~~-----~---------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 195 RQRKEKV-E-KEELKRRTLEMA-----V---------EYPDKFSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred CCCcccc-c-HHHHHhcccccc-----c---------cCCccCCHHHHHHHHHHccCChhHccCCCc
Confidence 6532211 1 111111110000 0 011223456789999999999999995444
No 331
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.84 E-value=1.1e-20 Score=190.69 Aligned_cols=175 Identities=15% Similarity=0.188 Sum_probs=132.3
Q ss_pred hccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCC
Q 040540 456 LRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGED 535 (669)
Q Consensus 456 l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~ 535 (669)
+....|++++.+++.+...+..++||||+++|+|.+++.. ...+++..+..++.++++|+.|||. .+++|+|+++
T Consensus 51 ~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~----~~i~H~di~p 125 (278)
T cd05606 51 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHN----RFVVYRDLKP 125 (278)
T ss_pred HHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH----CCEEcCCCCH
Confidence 4445799999999999888889999999999999999875 3468999999999999999999994 4799999984
Q ss_pred cc-----------------------cccccccccccCccccccCC-CcCccccchhhHHHHHHHHhCCCCCCcCCCCCcc
Q 040540 536 SV-----------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMS 591 (669)
Q Consensus 536 ~~-----------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~ 591 (669)
.. ......|+..|+|||++.++ .++.++||||+||++|||++|+.||.........
T Consensus 126 ~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~ 205 (278)
T cd05606 126 ANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH 205 (278)
T ss_pred HHEEECCCCCEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH
Confidence 31 01123589999999998754 5889999999999999999999999753221110
Q ss_pred HHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 040540 592 LRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM-----HMTDAAA 652 (669)
Q Consensus 592 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp-----s~~~v~~ 652 (669)
........ ....+ +...+..+.+++.+|+..+|++|| ++.|+++
T Consensus 206 ~~~~~~~~--------~~~~~---------~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 206 EIDRMTLT--------MAVEL---------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred HHHHHhhc--------cCCCC---------CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 00000000 00111 112345678999999999999999 8888875
No 332
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.84 E-value=3.4e-21 Score=195.63 Aligned_cols=187 Identities=21% Similarity=0.209 Sum_probs=135.6
Q ss_pred cCchhhhhhcccc-ccccceeccccccccccceeeccCCCCChHHhh---hc-CCCccCHHHHHHHHHhHHhhhhhhhcC
Q 040540 448 SFDSECEVLRNVR-HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL---YS-HNYFLDILERLNIMIDVGSALEYLRHG 522 (669)
Q Consensus 448 ~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l---~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~ 522 (669)
.+..|+..+.++. |+|++++++++..+...+++|||++ +++.++. .. ....+++.....++.++++|++|||+.
T Consensus 48 ~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~ 126 (288)
T cd06616 48 RLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE 126 (288)
T ss_pred HHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 4566888888886 9999999999988888899999987 4554433 22 235688889999999999999999953
Q ss_pred CCCCCeeecCCCCcc------------------------cccccccccccCccccccCC---CcCccccchhhHHHHHHH
Q 040540 523 HSSAPIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEG---IVSAKCDVYSYGVLLMET 575 (669)
Q Consensus 523 ~~~~~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~s~Gvil~el 575 (669)
.+++|+|+++.. ......|+..|+|||++.+. .++.++|||||||++|||
T Consensus 127 ---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el 203 (288)
T cd06616 127 ---LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEV 203 (288)
T ss_pred ---CCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHH
Confidence 479999998431 01122478899999998765 689999999999999999
Q ss_pred HhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 576 FTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 576 ~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
++|+.||.... .....+........ +.+.. ..+...+..+.+++.+||+.+|++|||+.+|++
T Consensus 204 ~~g~~p~~~~~----~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 204 ATGKFPYPKWN----SVFDQLTQVVKGDP-----PILSN-----SEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred HhCCCCchhcc----hHHHHHhhhcCCCC-----CcCCC-----cCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 99999986532 11111111111100 11110 011234556889999999999999999999977
No 333
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.84 E-value=6.6e-21 Score=197.19 Aligned_cols=186 Identities=16% Similarity=0.163 Sum_probs=135.6
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|..++...+|++++.+++++...+..++||||+++|+|.+++.+....+++.....++.|++.||+|+|. .+
T Consensus 47 ~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~----~~ 122 (331)
T cd05624 47 CFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQ----LH 122 (331)
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 35567888888999999999999999999999999999999999998655568888888999999999999994 58
Q ss_pred eeecCCCCcc--------------------------cccccccccccCccccccC-----CCcCccccchhhHHHHHHHH
Q 040540 528 IIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGSE-----GIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 528 i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~Gvil~el~ 576 (669)
|+|||+|+.. ......||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 123 iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell 202 (331)
T cd05624 123 YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 202 (331)
T ss_pred eeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhh
Confidence 9999998430 0011358999999998865 45788999999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCC--CCCHHHHHH
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDK--RMHMTDAAA 652 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~--Rps~~~v~~ 652 (669)
+|+.||..... .+...........-.+.+. ..+.+..+.+++.+|+..++++ |++++++.+
T Consensus 203 ~g~~Pf~~~~~-----~~~~~~i~~~~~~~~~p~~----------~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 203 YGETPFYAESL-----VETYGKIMNHEERFQFPSH----------ITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred hCCCCccCCCH-----HHHHHHHHcCCCcccCCCc----------cccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 99999965221 1111111000000000000 1123456788999988866544 467777764
No 334
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.84 E-value=6.3e-21 Score=198.69 Aligned_cols=196 Identities=21% Similarity=0.195 Sum_probs=134.5
Q ss_pred cCchhhhhhccccccccceeccccccc------cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhc
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNP------DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
.+..|+..+..++|+|++++++++... ...++++|++ +++|.+++.. ..+++.....++.|+++||+|||.
T Consensus 60 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~ 136 (343)
T cd07878 60 RTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHS 136 (343)
T ss_pred HHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 355789999999999999999877532 3457889988 6899988864 358889999999999999999994
Q ss_pred CCCCCCeeecCCCCcc----------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhC
Q 040540 522 GHSSAPIIHCEGEDSV----------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~----------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg 578 (669)
.+|+|||+|+.. ......||..|+|||++.+ ..++.++||||+||++|||++|
T Consensus 137 ----~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g 212 (343)
T cd07878 137 ----AGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKG 212 (343)
T ss_pred ----CCeecccCChhhEEECCCCCEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHC
Confidence 479999999531 1122358999999999876 5688999999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccc---cc--------cccchh-hhh-hhhHHHHHHHHHHHhhcccCCCCCCC
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVV---DT--------NLVREE-QAF-SAKMDCLLSIMDLALDCCMESPDKRM 645 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~--------~~~~~~-~~~-~~~~~~~~~~~~l~~~c~~~~P~~Rp 645 (669)
+.||..... ...+..+.... .....+.. .. .+.... ... .........+.+++.+|+..||.+||
T Consensus 213 ~~pf~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~ 290 (343)
T cd07878 213 KALFPGNDY-IDQLKRIMEVV-GTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRI 290 (343)
T ss_pred CCCCCCCCH-HHHHHHHHHHh-CCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCC
Confidence 999865211 11111111110 00000000 00 000000 000 00011233578999999999999999
Q ss_pred CHHHHHH
Q 040540 646 HMTDAAA 652 (669)
Q Consensus 646 s~~~v~~ 652 (669)
|+.|+++
T Consensus 291 s~~ell~ 297 (343)
T cd07878 291 SASEALA 297 (343)
T ss_pred CHHHHhc
Confidence 9999985
No 335
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.84 E-value=8.3e-21 Score=192.25 Aligned_cols=176 Identities=22% Similarity=0.229 Sum_probs=130.6
Q ss_pred hccccccccceeccccccccccceeeccCCCCChHHhhhc---CCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecC
Q 040540 456 LRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCE 532 (669)
Q Consensus 456 l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d 532 (669)
++..+|+|++++++++..+...+++|||++ |+|.+++.. .+..+++.....++.|++.|++|||.. .+++|+|
T Consensus 54 ~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~~i~h~d 129 (283)
T cd06617 54 MRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK---LSVIHRD 129 (283)
T ss_pred HHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc---CCeecCC
Confidence 556689999999999988888999999997 788888754 334688999999999999999999942 3799999
Q ss_pred CCCcc------------------------cccccccccccCccccccC----CCcCccccchhhHHHHHHHHhCCCCCCc
Q 040540 533 GEDSV------------------------TQTTTMATIGYMAPEYGSE----GIVSAKCDVYSYGVLLMETFTRKRPTDE 584 (669)
Q Consensus 533 ~~~~~------------------------~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 584 (669)
+++.. ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus 130 lkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (283)
T cd06617 130 VKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS 209 (283)
T ss_pred CCHHHEEECCCCCEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence 98431 0111347888999998764 4468899999999999999999999865
Q ss_pred CCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 585 MFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 585 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
.......+........ +.+. ....+..+.+++.+||..+|++||++.++++
T Consensus 210 ~~~~~~~~~~~~~~~~---------~~~~--------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 210 WKTPFQQLKQVVEEPS---------PQLP--------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred cccCHHHHHHHHhcCC---------CCCC--------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 3221111222111110 0010 0112346789999999999999999999986
No 336
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.84 E-value=7.1e-21 Score=193.40 Aligned_cols=179 Identities=21% Similarity=0.190 Sum_probs=137.9
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..++.++|+|++++++.+......++||||+++++|.+++... ..+++..+..++.+++.|+.|||. .+
T Consensus 47 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~----~~ 121 (290)
T cd05580 47 HVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHS----LD 121 (290)
T ss_pred HHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 4567889999999999999999999888999999999999999999754 568888999999999999999995 58
Q ss_pred eeecCCCCcc----------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcC
Q 040540 528 IIHCEGEDSV----------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 585 (669)
Q Consensus 528 i~h~d~~~~~----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 585 (669)
++|+|+++.. ......|++.|+|||...+..++.++||||||+++|||++|+.||...
T Consensus 122 i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 201 (290)
T cd05580 122 IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDD 201 (290)
T ss_pred EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 9999988431 011224788999999988878889999999999999999999998653
Q ss_pred CCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHH
Q 040540 586 FTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM-----HMTDAA 651 (669)
Q Consensus 586 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp-----s~~~v~ 651 (669)
. .......... ... .+ +......+.+++.+||..||.+|| +++|++
T Consensus 202 ~--~~~~~~~~~~---~~~------~~---------~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 202 N--PIQIYEKILE---GKV------RF---------PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred C--HHHHHHHHhc---CCc------cC---------CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 2 1111111110 000 00 112234678999999999999999 555554
No 337
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.83 E-value=1e-20 Score=188.54 Aligned_cols=182 Identities=23% Similarity=0.253 Sum_probs=141.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC---CCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
.+..|+..++.++|+|++++++.+......++||||+++++|.+++.+. +..+++.....++.++++|+.|||.
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~--- 121 (256)
T cd08530 45 DAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE--- 121 (256)
T ss_pred HHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---
Confidence 4456888899999999999999988888899999999999999998752 3457888999999999999999994
Q ss_pred CCCeeecCCCCcc-----------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 525 SAPIIHCEGEDSV-----------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 525 ~~~i~h~d~~~~~-----------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
.+++|+|+++.. ......|+..|++||...+..++.++|+||+|+++|||++|+.|
T Consensus 122 -~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p 200 (256)
T cd08530 122 -QKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPP 200 (256)
T ss_pred -CCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 478999988541 01112478899999999888899999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|..... ..+...+... ... . .+.....++.+++.+|++.+|++||++.|+++
T Consensus 201 ~~~~~~--~~~~~~~~~~---~~~-----~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 201 FEARSM--QDLRYKVQRG---KYP-----P---------IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CCCCCH--HHHHHHHhcC---CCC-----C---------CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 865321 1111111110 000 0 11234556889999999999999999999875
No 338
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.83 E-value=5.2e-21 Score=188.13 Aligned_cols=170 Identities=18% Similarity=0.109 Sum_probs=128.4
Q ss_pred hhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeec
Q 040540 452 ECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHC 531 (669)
Q Consensus 452 e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~ 531 (669)
|...+....|||++++++.+......+++|||+++|+|.+++.+. ..+++.....++.++++|++|+|. .+++|+
T Consensus 35 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~----~~i~H~ 109 (237)
T cd05576 35 ERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF-LNIPEECVKRWAAEMVVALDALHR----EGIVCR 109 (237)
T ss_pred HHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHh----CCeecc
Confidence 333344456999999999998888999999999999999999754 358999999999999999999994 479999
Q ss_pred CCCCccc----------------------ccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCC
Q 040540 532 EGEDSVT----------------------QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGE 589 (669)
Q Consensus 532 d~~~~~~----------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~ 589 (669)
|+|+... .....++..|+|||......++.++||||+||++|||++|+.|+.......
T Consensus 110 dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~ 189 (237)
T cd05576 110 DLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI 189 (237)
T ss_pred CCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc
Confidence 9995310 011235667999999888888999999999999999999998864311000
Q ss_pred ccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 040540 590 MSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650 (669)
Q Consensus 590 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v 650 (669)
.......+ +......+.+++.+|++.||++||++.++
T Consensus 190 ---------------~~~~~~~~---------~~~~~~~~~~li~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 190 ---------------NTHTTLNI---------PEWVSEEARSLLQQLLQFNPTERLGAGVA 226 (237)
T ss_pred ---------------ccccccCC---------cccCCHHHHHHHHHHccCCHHHhcCCCcc
Confidence 00000000 11233457899999999999999997444
No 339
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.83 E-value=3.1e-21 Score=186.34 Aligned_cols=190 Identities=18% Similarity=0.280 Sum_probs=145.7
Q ss_pred Cchhhhhhccccccccceecccccccc-ccceeeccCCCCChHHhhh-----c--CCCccCHHHHHHHHHhHHhhhhhhh
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNPD-FKALVLEFMPNGSLEKWLY-----S--HNYFLDILERLNIMIDVGSALEYLR 520 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ey~~~g~L~~~l~-----~--~~~~l~~~~~~~i~~~i~~~l~~lh 520 (669)
+..|.-.+..+.|||+.++.+.+..+. ..+.+|.++.-|+|..+|. + ..+.+...+...++.|++.|++|||
T Consensus 334 ~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh 413 (563)
T KOG1024|consen 334 LLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH 413 (563)
T ss_pred HHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH
Confidence 445556677888999999999987754 4567889999999999998 2 2235667788899999999999999
Q ss_pred cCCCCCCeeecCCCCc---------------cc-----c--ccccc-----ccccCccccccCCCcCccccchhhHHHHH
Q 040540 521 HGHSSAPIIHCEGEDS---------------VT-----Q--TTTMA-----TIGYMAPEYGSEGIVSAKCDVYSYGVLLM 573 (669)
Q Consensus 521 ~~~~~~~i~h~d~~~~---------------~~-----~--~~~~g-----t~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ 573 (669)
. .++||.|+..- .- + ....| ...||+||.+....|+.++|||||||++|
T Consensus 414 ~----~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllW 489 (563)
T KOG1024|consen 414 N----HGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLW 489 (563)
T ss_pred h----cCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHH
Confidence 4 58999887621 00 0 00012 35799999999999999999999999999
Q ss_pred HHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 574 ETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 574 el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
||+| |+.||.+..+ ..+..+++. +.|...|-.|++++..++.-||+..|++||++++++.
T Consensus 490 ELmtlg~~PyaeIDP--fEm~~ylkd-----------------GyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 490 ELMTLGKLPYAEIDP--FEMEHYLKD-----------------GYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred HHHhcCCCCccccCH--HHHHHHHhc-----------------cceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 9998 8999976432 223333322 2233345678888999999999999999999999999
Q ss_pred HHHHhHHHh
Q 040540 653 KLKKIKVKF 661 (669)
Q Consensus 653 ~l~~~~~~~ 661 (669)
-|.++...+
T Consensus 551 cLseF~~ql 559 (563)
T KOG1024|consen 551 CLSEFHTQL 559 (563)
T ss_pred HHHHHHHHH
Confidence 999876543
No 340
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.83 E-value=9.4e-21 Score=179.84 Aligned_cols=196 Identities=21% Similarity=0.202 Sum_probs=137.7
Q ss_pred Cchhhhhhccccccccceeccccc--cccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCS--NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+|+.++.+++|||||.+-.... +-+.+|+|||||. -+|..++..-+.++...+..-++.|+.+|++|||+ .
T Consensus 122 sLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~E-hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~----~ 196 (419)
T KOG0663|consen 122 SLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVE-HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHD----N 196 (419)
T ss_pred hHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHH-hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhh----c
Confidence 347899999999999999866553 3455899999998 59999998767778888888899999999999995 4
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCccccccCC-CcCccccchhhHHHHHHHHhCCC
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
-|+|||+|.+. ..+..+-|..|.|||.+.+. .|+.+.|+||+|||+.||+++++
T Consensus 197 wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kP 276 (419)
T KOG0663|consen 197 WILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKP 276 (419)
T ss_pred eeEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCC
Confidence 79999999541 12334568899999998875 49999999999999999999997
Q ss_pred CCCcCCCCCccHHHHHHHhC--CCC--cccccc-ccc-----cc-----hhhhhhhhHHHHHHHHHHHhhcccCCCCCCC
Q 040540 581 PTDEMFTGEMSLRRWVKESL--PHR--LSEVVD-TNL-----VR-----EEQAFSAKMDCLLSIMDLALDCCMESPDKRM 645 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~--~~~--~~~~~~-~~~-----~~-----~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp 645 (669)
-|.+.. +.+..+-+-..+ |.. +..+-. +.. .. -..+|+.- .......++....+..||.+|-
T Consensus 277 lf~G~s--E~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~-~lse~g~~Lln~llt~dP~kR~ 353 (419)
T KOG0663|consen 277 LFPGKS--EIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGAL-SLSEQGFDLLNKLLTYDPGKRI 353 (419)
T ss_pred CCCCCc--hHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhcccc-ccchhHHHHHHHHhccCccccc
Confidence 775521 221111111111 110 000000 000 00 00111111 1335678999999999999999
Q ss_pred CHHHHHH
Q 040540 646 HMTDAAA 652 (669)
Q Consensus 646 s~~~v~~ 652 (669)
|++|.++
T Consensus 354 tA~~~L~ 360 (419)
T KOG0663|consen 354 TAEDGLK 360 (419)
T ss_pred cHHHhhc
Confidence 9999875
No 341
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.83 E-value=2.5e-21 Score=193.90 Aligned_cols=186 Identities=20% Similarity=0.243 Sum_probs=140.8
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..+..++|+|++++++.+......+++|||+++++|.+++.+.+ .+++..+..++.++++|++|||. .
T Consensus 38 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~----~ 112 (265)
T cd05579 38 DQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHS----N 112 (265)
T ss_pred HHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH----c
Confidence 356678888999999999999999888888999999999999999998644 68999999999999999999995 4
Q ss_pred CeeecCCCCcc---------------------------------cccccccccccCccccccCCCcCccccchhhHHHHH
Q 040540 527 PIIHCEGEDSV---------------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLM 573 (669)
Q Consensus 527 ~i~h~d~~~~~---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ 573 (669)
+++|+|+++.. ......++..|+|||......++.++||||||+++|
T Consensus 113 ~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~ 192 (265)
T cd05579 113 GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILY 192 (265)
T ss_pred CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHH
Confidence 79999988420 001124677899999998888899999999999999
Q ss_pred HHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 574 ETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 574 el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
|+++|+.||..... ......... .... .+........+.+++.+||+.+|++|||+.+|.+.
T Consensus 193 ~l~~g~~p~~~~~~--~~~~~~~~~---~~~~-------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~ 254 (265)
T cd05579 193 EFLVGIPPFHGETP--EEIFQNILN---GKIE-------------WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEI 254 (265)
T ss_pred HHHhCCCCCCCCCH--HHHHHHHhc---CCcC-------------CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHH
Confidence 99999999865321 111111111 0000 00000124567899999999999999999666554
Q ss_pred HH
Q 040540 654 LK 655 (669)
Q Consensus 654 l~ 655 (669)
|+
T Consensus 255 l~ 256 (265)
T cd05579 255 KN 256 (265)
T ss_pred hc
Confidence 43
No 342
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.83 E-value=1.5e-20 Score=190.51 Aligned_cols=197 Identities=16% Similarity=0.195 Sum_probs=139.1
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC--CccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN--YFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
.+..|+..++.++|+|++++++.+...+..++||||++ +++.+++.... ..+++....+++.+++.|++|||.
T Consensus 44 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---- 118 (284)
T cd07836 44 TAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE---- 118 (284)
T ss_pred HHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH----
Confidence 34568899999999999999999998888999999998 58998887543 468999999999999999999994
Q ss_pred CCeeecCCCCcc-------------------------cccccccccccCccccccCC-CcCccccchhhHHHHHHHHhCC
Q 040540 526 APIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 526 ~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~ 579 (669)
.+++|+|+++.. ......++..|++||++.+. .++.++|||||||++|||++|+
T Consensus 119 ~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~ 198 (284)
T cd07836 119 NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGR 198 (284)
T ss_pred CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 479999998431 01123467889999987653 4788999999999999999999
Q ss_pred CCCCcCCCCCccHHHHHHHhC-C-----------CCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 580 RPTDEMFTGEMSLRRWVKESL-P-----------HRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
.||....... .......... + ....... +..... ............+.+++.+|++.||++||++
T Consensus 199 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~ 275 (284)
T cd07836 199 PLFPGTNNED-QLLKIFRIMGTPTESTWPGISQLPEYKPTF-PRYPPQ-DLQQLFPHADPLGIDLLHRLLQLNPELRISA 275 (284)
T ss_pred CCCCCCCcHH-HHHHHHHHhCCCChhhHHHHhcCchhcccc-cCCChH-HHHHHhhhcCcHHHHHHHHHhcCCcccCCCH
Confidence 9987532211 1111110000 0 0000000 000000 0000012335678899999999999999999
Q ss_pred HHHHH
Q 040540 648 TDAAA 652 (669)
Q Consensus 648 ~~v~~ 652 (669)
.|+++
T Consensus 276 ~~~l~ 280 (284)
T cd07836 276 HDALQ 280 (284)
T ss_pred HHHhc
Confidence 99874
No 343
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.83 E-value=1.4e-20 Score=193.22 Aligned_cols=199 Identities=20% Similarity=0.227 Sum_probs=133.7
Q ss_pred Cchhhhhhccccccccceeccccccccc--------cceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhh
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNPDF--------KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLR 520 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~~~--------~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh 520 (669)
+..|+..++.++|||++++++.|..... .++||||+. +++.+++......+++.+...++.|++.|++|||
T Consensus 58 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH 136 (310)
T cd07865 58 ALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIH 136 (310)
T ss_pred HHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 3468889999999999999998765443 389999997 5888888765556899999999999999999999
Q ss_pred cCCCCCCeeecCCCCcc-----------------------c------ccccccccccCccccccCC-CcCccccchhhHH
Q 040540 521 HGHSSAPIIHCEGEDSV-----------------------T------QTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGV 570 (669)
Q Consensus 521 ~~~~~~~i~h~d~~~~~-----------------------~------~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv 570 (669)
. .+++|+|+++.. . .....++..|+|||...+. .++.++||||||+
T Consensus 137 ~----~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ 212 (310)
T cd07865 137 R----NKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGC 212 (310)
T ss_pred H----CCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHH
Confidence 5 479999988430 0 0112367789999987664 3788999999999
Q ss_pred HHHHHHhCCCCCCcCCCCC-ccHHHHHHHhCCCCcc-cc-----ccc-cccchhh-hhh---hhHHHHHHHHHHHhhccc
Q 040540 571 LLMETFTRKRPTDEMFTGE-MSLRRWVKESLPHRLS-EV-----VDT-NLVREEQ-AFS---AKMDCLLSIMDLALDCCM 638 (669)
Q Consensus 571 il~el~tg~~p~~~~~~~~-~~l~~~~~~~~~~~~~-~~-----~~~-~~~~~~~-~~~---~~~~~~~~~~~l~~~c~~ 638 (669)
++|||+||+.||....... ......+....+..+. .. .+. ....... ..+ .+......+.+++.+||.
T Consensus 213 ~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~ 292 (310)
T cd07865 213 IMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLV 292 (310)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhc
Confidence 9999999999986522110 0111111111111100 00 000 0000000 000 000123456799999999
Q ss_pred CCCCCCCCHHHHHH
Q 040540 639 ESPDKRMHMTDAAA 652 (669)
Q Consensus 639 ~~P~~Rps~~~v~~ 652 (669)
.||++|||++|+++
T Consensus 293 ~~P~~R~t~~e~l~ 306 (310)
T cd07865 293 LDPAKRIDADTALN 306 (310)
T ss_pred CChhhccCHHHHhc
Confidence 99999999999874
No 344
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.83 E-value=3.5e-21 Score=192.36 Aligned_cols=184 Identities=26% Similarity=0.356 Sum_probs=139.4
Q ss_pred hhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeee
Q 040540 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH 530 (669)
Q Consensus 451 ~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h 530 (669)
.|...+..++|+|++++++.+......+++|||+++++|.+++. ....+++..+..++.++++||++||+. +++|
T Consensus 47 ~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~----~i~H 121 (260)
T PF00069_consen 47 REIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSK----GIVH 121 (260)
T ss_dssp HHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHT----TEEE
T ss_pred hhhhcccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccc----cccc
Confidence 37888999999999999999988888899999999999999998 335589999999999999999999964 8999
Q ss_pred cCCCCcc-----------------c--------ccccccccccCcccccc-CCCcCccccchhhHHHHHHHHhCCCCCCc
Q 040540 531 CEGEDSV-----------------T--------QTTTMATIGYMAPEYGS-EGIVSAKCDVYSYGVLLMETFTRKRPTDE 584 (669)
Q Consensus 531 ~d~~~~~-----------------~--------~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 584 (669)
+|+++.. . .....++..|+|||+.. ...++.++||||+|+++|||++|+.||..
T Consensus 122 ~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~ 201 (260)
T PF00069_consen 122 RDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEE 201 (260)
T ss_dssp SSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9998530 0 11224788999999988 77899999999999999999999999876
Q ss_pred CCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 585 MFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 585 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
.. .............. ..... ..........+.+++.+|++.||++||++.++++
T Consensus 202 ~~--~~~~~~~~~~~~~~--------~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 202 SN--SDDQLEIIEKILKR--------PLPSS---SQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp SS--HHHHHHHHHHHHHT--------HHHHH---TTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cc--chhhhhhhhhcccc--------ccccc---ccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 41 11111111111000 00000 0001111267889999999999999999999875
No 345
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.83 E-value=1.7e-20 Score=190.38 Aligned_cols=198 Identities=20% Similarity=0.164 Sum_probs=139.0
Q ss_pred cCchhhhhhccccccccceeccccccc--cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNP--DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
.+..|+..+..++|+|++++++.+... ...++||||++ ++|.+++......+++..+..++.++++|++|||..
T Consensus 44 ~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~--- 119 (287)
T cd07840 44 TAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN--- 119 (287)
T ss_pred HHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 456788999999999999999999877 78899999998 589999876555789999999999999999999954
Q ss_pred CCeeecCCCCcc--------------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhC
Q 040540 526 APIIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 526 ~~i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg 578 (669)
+++|+|+++.. ......++..|+|||.+.+ ..++.++||||||+++|||+||
T Consensus 120 -~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~ 198 (287)
T cd07840 120 -GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLG 198 (287)
T ss_pred -CceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhC
Confidence 79999988430 0112245778999997765 4578999999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhC----CCCcccccc--------ccccc-hhhhhhhhHHHHHHHHHHHhhcccCCCCCCC
Q 040540 579 KRPTDEMFTGEMSLRRWVKESL----PHRLSEVVD--------TNLVR-EEQAFSAKMDCLLSIMDLALDCCMESPDKRM 645 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~----~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp 645 (669)
+.||..... ......+.... +..+....+ +.... ...+......+...+.+++.+||..+|++||
T Consensus 199 ~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp 276 (287)
T cd07840 199 KPIFQGSTE--LEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRI 276 (287)
T ss_pred CCCCCCCCh--HHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCc
Confidence 999865321 11111111110 000000000 00000 0000000011256788999999999999999
Q ss_pred CHHHHHH
Q 040540 646 HMTDAAA 652 (669)
Q Consensus 646 s~~~v~~ 652 (669)
+++++++
T Consensus 277 ~~~~~l~ 283 (287)
T cd07840 277 SADQALQ 283 (287)
T ss_pred CHHHHhh
Confidence 9999875
No 346
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.83 E-value=1e-20 Score=192.90 Aligned_cols=184 Identities=20% Similarity=0.188 Sum_probs=132.9
Q ss_pred chhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 450 DSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 450 ~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
..|+..+.+. .|+|+++++++|......+++|||++ +++.++.......+++..+..++.++++|++|||. ..++
T Consensus 61 ~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~---~~~i 136 (296)
T cd06618 61 LMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE---KHGV 136 (296)
T ss_pred HHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---hCCE
Confidence 3455555555 49999999999999999999999986 57777776544578999999999999999999994 2479
Q ss_pred eecCCCCcc------------------------cccccccccccCccccccCCC----cCccccchhhHHHHHHHHhCCC
Q 040540 529 IHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGI----VSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 529 ~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
+|+|+++.. ......|+..|+|||.+.+.. ++.++||||||+++|||++|+.
T Consensus 137 ~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~ 216 (296)
T cd06618 137 IHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQF 216 (296)
T ss_pred ecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCC
Confidence 999988431 011123677899999986543 7889999999999999999999
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
||.....+...+...+....+ . + +........+.+++.+||..||++||++.++++.
T Consensus 217 p~~~~~~~~~~~~~~~~~~~~-~--------~-------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 217 PYKNCKTEFEVLTKILQEEPP-S--------L-------PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCCcchhHHHHHHHHhcCCCC-C--------C-------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 986522111111111111100 0 0 0011223457899999999999999999999764
No 347
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.83 E-value=1.7e-20 Score=189.96 Aligned_cols=194 Identities=19% Similarity=0.197 Sum_probs=136.6
Q ss_pred hhhhhhcccc-ccccceeccccccccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 451 SECEVLRNVR-HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 451 ~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
.|+..+.+++ |+|++++++.+......++||||+ +|++.+++.... ..+++..+..++.++++|+.|||+ .++
T Consensus 46 ~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~----~~i 120 (283)
T cd07830 46 REVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK----HGF 120 (283)
T ss_pred HHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH----CCc
Confidence 4777888888 999999999999989999999999 789999987643 468999999999999999999995 479
Q ss_pred eecCCCCcc------------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 529 IHCEGEDSV------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 529 ~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
+|+|+++.. ......|+..|+|||++.+ ..++.++||||||++++||++|+.||.
T Consensus 121 ~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~ 200 (283)
T cd07830 121 FHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFP 200 (283)
T ss_pred ccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccC
Confidence 999988431 0112347888999998754 457899999999999999999999985
Q ss_pred cCCCCCccHH------------HHHHHh-CCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 040540 584 EMFTGEMSLR------------RWVKES-LPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650 (669)
Q Consensus 584 ~~~~~~~~l~------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v 650 (669)
...... .+. .|.... ........+........ ..........+.+++.+||+.+|++||+++|+
T Consensus 201 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei 277 (283)
T cd07830 201 GSSEID-QLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSL--HQLIPNASPEAIDLIKDMLRWDPKKRPTASQA 277 (283)
T ss_pred CCChHH-HHHHHHHhcCCCChhhhhhHhhhhccccccccccccccH--HHHcccCCHHHHHHHHHhcccCcccCCCHHHH
Confidence 432110 010 011000 00000000000000000 00011124668899999999999999999998
Q ss_pred HH
Q 040540 651 AA 652 (669)
Q Consensus 651 ~~ 652 (669)
+.
T Consensus 278 ~~ 279 (283)
T cd07830 278 LQ 279 (283)
T ss_pred hh
Confidence 75
No 348
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.83 E-value=8.8e-20 Score=200.76 Aligned_cols=262 Identities=26% Similarity=0.331 Sum_probs=137.0
Q ss_pred CEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccccccccCccccCCcccCCCCCCCeeecccc
Q 040540 78 VSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLEMLRAEFN 157 (669)
Q Consensus 78 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n 157 (669)
..|++++|.++ .+|..+. .+|+.|++++|+++ .+|. .+++|++|+|++|+++. +|.. .++|+.|++++|
T Consensus 204 ~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N 272 (788)
T PRK15387 204 AVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSN 272 (788)
T ss_pred cEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccCc-ccCc---ccccceeeccCC
Confidence 34555555554 3444443 24555555555554 2332 13455555555555552 3321 234555555555
Q ss_pred cccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEcccCCCccccch
Q 040540 158 IIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGLIPPTIFNISTMRILTLESNQLSGRLPS 237 (669)
Q Consensus 158 ~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~ 237 (669)
.+. .+|.. ..+|+.|++++|+++ .+|.. +++|+.|++++|++++. |.. ..+|+.|++++|.++ .+|.
T Consensus 273 ~L~-~Lp~l---p~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N~L~-~LP~ 339 (788)
T PRK15387 273 PLT-HLPAL---PSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLASL-PAL---PSELCKLWAYNNQLT-SLPT 339 (788)
T ss_pred chh-hhhhc---hhhcCEEECcCCccc-ccccc---ccccceeECCCCccccC-CCC---cccccccccccCccc-cccc
Confidence 544 22322 134555666666665 23331 34566666666666642 321 124555666666665 3443
Q ss_pred hhhccCCCCCeeecccCcccccCCccccCCCCCCEEeCCCCCccccCccccCCCCCCCEEEccCCccccCCCCCcccccc
Q 040540 238 TIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTTESSSADQWSFL 317 (669)
Q Consensus 238 ~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~ 317 (669)
. ..+|++|+|++|++++ +|.. ..+|+.|++++|.+.. +|.. ..+|+.|++++|+++..+..
T Consensus 340 l----p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~LP~l------- 400 (788)
T PRK15387 340 L----PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTSLPVL------- 400 (788)
T ss_pred c----ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccCCCCc-------
Confidence 1 1356666666666653 3332 2345566666666653 4432 24566677777766654311
Q ss_pred cccCCCCCCCEEECcCCCCccccchhHhhhhccccccceEeecCcccCCCCCccccccCCCcEEecCCCcccccCchhh
Q 040540 318 SSLTNCRNLSNLALASNPLGGILPQLIGNFSASLQNIYAFELGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGYVPHDL 396 (669)
Q Consensus 318 ~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~l~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~~~~~~p~~~ 396 (669)
.++|+.|++++|.+.+ +|..+ ..|..|++++|.++ .+|..+..+..|+.+++++|.+++..+..+
T Consensus 401 -----~s~L~~LdLS~N~Lss-IP~l~-------~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 401 -----PSELKELMVSGNRLTS-LPMLP-------SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred -----ccCCCEEEccCCcCCC-CCcch-------hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 1356677777777664 33221 23455666666665 456666666777777777777776665554
No 349
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.83 E-value=1.8e-20 Score=186.91 Aligned_cols=184 Identities=20% Similarity=0.244 Sum_probs=142.4
Q ss_pred ccCchhhhhhccccccccceeccccccc--cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNP--DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
..+..|+..++++.|+|++++++.+... ...++++||+++++|.+++.+.. .+++..+..++.++++|++|||.
T Consensus 44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~--- 119 (260)
T cd06606 44 EALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHS--- 119 (260)
T ss_pred HHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---
Confidence 4567789999999999999999998877 78899999999999999998644 78999999999999999999995
Q ss_pred CCCeeecCCCCc-----------------------cc----ccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 525 SAPIIHCEGEDS-----------------------VT----QTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 525 ~~~i~h~d~~~~-----------------------~~----~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
.+++|+|+++. .. .....++..|+|||...+..++.++||||||++++||++
T Consensus 120 -~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~ 198 (260)
T cd06606 120 -NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMAT 198 (260)
T ss_pred -CCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHh
Confidence 47999998732 00 122347889999999988889999999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
|+.||.... . .............. +. .+......+.+++.+|++.+|++||++.|+++
T Consensus 199 g~~p~~~~~-~--~~~~~~~~~~~~~~-----~~---------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 199 GKPPWSELG-N--PMAALYKIGSSGEP-----PE---------IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CCCCCCCCC-c--hHHHHHhccccCCC-----cC---------CCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 999987632 1 11111000000000 00 12233456889999999999999999999975
No 350
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.83 E-value=1.9e-20 Score=190.67 Aligned_cols=198 Identities=17% Similarity=0.164 Sum_probs=135.9
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|+..++.++|+|++++++++......++||||++ +++.+++.... ...++.....++.+++.|++|||. .
T Consensus 47 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~----~ 121 (294)
T PLN00009 47 TAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS----H 121 (294)
T ss_pred HHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh----C
Confidence 45678999999999999999999998899999999996 58888876432 235677777899999999999994 4
Q ss_pred CeeecCCCCccc--------------------------ccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCC
Q 040540 527 PIIHCEGEDSVT--------------------------QTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 527 ~i~h~d~~~~~~--------------------------~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~ 579 (669)
+++|+|+++... .....|++.|+|||++.+ ..++.++|||||||++|||+||+
T Consensus 122 ~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~ 201 (294)
T PLN00009 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQK 201 (294)
T ss_pred CeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 799999885410 011235778999998766 45789999999999999999999
Q ss_pred CCCCcCCCCCccHHHHHHH-hCC--CCccccc---c-----ccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH
Q 040540 580 RPTDEMFTGEMSLRRWVKE-SLP--HRLSEVV---D-----TNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMT 648 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~-~~~--~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~ 648 (669)
.||..... ...+...... ..+ ..+.... + +..... ............+.+++.+|++.+|++||++.
T Consensus 202 ~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~ 279 (294)
T PLN00009 202 PLFPGDSE-IDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPK-DLATVVPTLEPAGVDLLSKMLRLDPSKRITAR 279 (294)
T ss_pred CCCCCCCH-HHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCC-CHHHhCcCCChHHHHHHHHHccCChhhCcCHH
Confidence 99865221 1111111100 000 0000000 0 000000 00000112345678999999999999999999
Q ss_pred HHHH
Q 040540 649 DAAA 652 (669)
Q Consensus 649 ~v~~ 652 (669)
++++
T Consensus 280 ~~l~ 283 (294)
T PLN00009 280 AALE 283 (294)
T ss_pred HHhc
Confidence 9986
No 351
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.82 E-value=2.1e-20 Score=186.32 Aligned_cols=182 Identities=20% Similarity=0.274 Sum_probs=142.1
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcC---CCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
.+..|++.++.++|+|++++.+.+......++++||+++++|.+++.+. +..+++.....++.++++|+.|||.
T Consensus 45 ~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~--- 121 (258)
T cd08215 45 DALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS--- 121 (258)
T ss_pred HHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh---
Confidence 4567888999999999999999988888889999999999999999764 3678999999999999999999994
Q ss_pred CCCeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCC
Q 040540 525 SAPIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 525 ~~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~ 579 (669)
.+++|+|+++.. ......|++.|+|||...+..++.++||||+|++++||++|+
T Consensus 122 -~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~ 200 (258)
T cd08215 122 -RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLK 200 (258)
T ss_pred -CCEecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCC
Confidence 389999988431 011234788899999988888999999999999999999999
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
.||.... ..+........... .+ +......+.+++.+||..+|++||++.|+++
T Consensus 201 ~p~~~~~-----~~~~~~~~~~~~~~-----~~---------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 201 HPFEGEN-----LLELALKILKGQYP-----PI---------PSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCCCCc-----HHHHHHHHhcCCCC-----CC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 9986532 11111111111100 00 1122345789999999999999999999875
No 352
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.82 E-value=1.1e-20 Score=200.40 Aligned_cols=185 Identities=17% Similarity=0.181 Sum_probs=144.2
Q ss_pred ccCchhhhhhccc-cccccceecccccc-----ccccceeeccCCCCChHHhhhc-CCCccCHHHHHHHHHhHHhhhhhh
Q 040540 447 RSFDSECEVLRNV-RHRNLIKIISSCSN-----PDFKALVLEFMPNGSLEKWLYS-HNYFLDILERLNIMIDVGSALEYL 519 (669)
Q Consensus 447 ~~~~~e~~~l~~l-~h~niv~l~~~~~~-----~~~~~lv~ey~~~g~L~~~l~~-~~~~l~~~~~~~i~~~i~~~l~~l 519 (669)
.+...|.+++... .|||++.++|++.. ++..|+|||||.+|+..++++. .+..+.|....-|.+++++|+.+|
T Consensus 60 eEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HL 139 (953)
T KOG0587|consen 60 EEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHL 139 (953)
T ss_pred HHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHH
Confidence 3444556666554 69999999998854 6788999999999999999986 345688888888999999999999
Q ss_pred hcCCCCCCeeecCCCCc-------------------------ccccccccccccCccccccC-----CCcCccccchhhH
Q 040540 520 RHGHSSAPIIHCEGEDS-------------------------VTQTTTMATIGYMAPEYGSE-----GIVSAKCDVYSYG 569 (669)
Q Consensus 520 h~~~~~~~i~h~d~~~~-------------------------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~G 569 (669)
|. ..++|||+|.. ....+.+||+.|||||++.. ..|+.++|+||+|
T Consensus 140 H~----nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLG 215 (953)
T KOG0587|consen 140 HN----NKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLG 215 (953)
T ss_pred hh----cceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhcc
Confidence 94 47999999943 12345579999999999854 3488899999999
Q ss_pred HHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 570 VLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 570 vil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
|+..||.-|.+|+.++.+.. .+-+.....++....+.....++.++|..|+.+|-.+||++.+
T Consensus 216 ITaIEladG~PPl~DmHPmr-----------------aLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ 278 (953)
T KOG0587|consen 216 ITAIEMAEGAPPLCDMHPMR-----------------ALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEE 278 (953)
T ss_pred ceeehhcCCCCCccCcchhh-----------------hhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhh
Confidence 99999999999998765321 0111122222223346778889999999999999999999988
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
.++
T Consensus 279 ll~ 281 (953)
T KOG0587|consen 279 LLK 281 (953)
T ss_pred hcc
Confidence 765
No 353
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.82 E-value=2.6e-20 Score=193.27 Aligned_cols=197 Identities=19% Similarity=0.187 Sum_probs=136.5
Q ss_pred cCchhhhhhccccccccceecccccc----ccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSN----PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
.+..|+.++..++|+|++++++.+.. ....++||||+. |+|.+++... ..+++.....++.++++|+.|||.
T Consensus 50 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~-- 125 (334)
T cd07855 50 RTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHS-- 125 (334)
T ss_pred HHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHH--
Confidence 44568899999999999999887753 345689999996 6899998753 458999999999999999999995
Q ss_pred CCCCeeecCCCCcc--------------------c---------ccccccccccCccccccC-CCcCccccchhhHHHHH
Q 040540 524 SSAPIIHCEGEDSV--------------------T---------QTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLM 573 (669)
Q Consensus 524 ~~~~i~h~d~~~~~--------------------~---------~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~ 573 (669)
.+++|+|+++.. . .....|+..|+|||++.. ..++.++|||||||++|
T Consensus 126 --~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~ 203 (334)
T cd07855 126 --ANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFA 203 (334)
T ss_pred --CCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHH
Confidence 479999998430 0 012257889999998765 45889999999999999
Q ss_pred HHHhCCCCCCcCCCCCccHHHHHHHhCCCC----cccccccccc-------c-hhhh-hhhhHHHHHHHHHHHhhcccCC
Q 040540 574 ETFTRKRPTDEMFTGEMSLRRWVKESLPHR----LSEVVDTNLV-------R-EEQA-FSAKMDCLLSIMDLALDCCMES 640 (669)
Q Consensus 574 el~tg~~p~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~-------~-~~~~-~~~~~~~~~~~~~l~~~c~~~~ 640 (669)
||++|+.||..... ......+....... ........+. . .... .....+.+..+.+++.+|++.+
T Consensus 204 el~~g~~pf~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 281 (334)
T cd07855 204 EMLGRRQLFPGKNY--VHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFD 281 (334)
T ss_pred HHHcCCCccCCCCh--HHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCC
Confidence 99999999965321 11111111111000 0000000000 0 0000 0001234567899999999999
Q ss_pred CCCCCCHHHHHH
Q 040540 641 PDKRMHMTDAAA 652 (669)
Q Consensus 641 P~~Rps~~~v~~ 652 (669)
|++||++++++.
T Consensus 282 P~~Rpt~~~~l~ 293 (334)
T cd07855 282 PEERITVEQALQ 293 (334)
T ss_pred hhhCcCHHHHHh
Confidence 999999999876
No 354
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.82 E-value=3.4e-20 Score=190.25 Aligned_cols=197 Identities=20% Similarity=0.160 Sum_probs=135.9
Q ss_pred Cchhhhhhccccccccceeccccccc--cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNP--DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+..|+.++.+++|+|++++++.+... +..++||||+. ++|.+++......+++.+...++.++++|++|||..
T Consensus 53 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---- 127 (309)
T cd07845 53 SLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---- 127 (309)
T ss_pred hhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC----
Confidence 44688999999999999999987654 45789999997 589988876556789999999999999999999954
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCC
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
+++|+|+++.. ......++..|+|||.+.+ ..++.++||||+||++|||++|+.
T Consensus 128 ~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~ 207 (309)
T cd07845 128 FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKP 207 (309)
T ss_pred CeecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCC
Confidence 79999988430 0111235678999998865 457899999999999999999999
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccc----cc------cccchhh--hhhhhHHHHHHHHHHHhhcccCCCCCCCCHH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVV----DT------NLVREEQ--AFSAKMDCLLSIMDLALDCCMESPDKRMHMT 648 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~------~~~~~~~--~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~ 648 (669)
||..... .....-+............ +. .+..... ...........+.+++.+|++.||++|||+.
T Consensus 208 ~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~ 285 (309)
T cd07845 208 LLPGKSE--IEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAE 285 (309)
T ss_pred CCCCCCH--HHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHH
Confidence 9875321 1111111111110000000 00 0000000 0000011345678999999999999999999
Q ss_pred HHHH
Q 040540 649 DAAA 652 (669)
Q Consensus 649 ~v~~ 652 (669)
|+++
T Consensus 286 ~il~ 289 (309)
T cd07845 286 EALE 289 (309)
T ss_pred HHhc
Confidence 9975
No 355
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.82 E-value=3.9e-20 Score=187.71 Aligned_cols=196 Identities=19% Similarity=0.208 Sum_probs=135.4
Q ss_pred Cchhhhhhccc---cccccceeccccccccc-----cceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhh
Q 040540 449 FDSECEVLRNV---RHRNLIKIISSCSNPDF-----KALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYL 519 (669)
Q Consensus 449 ~~~e~~~l~~l---~h~niv~l~~~~~~~~~-----~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~l 519 (669)
+..|+..+..+ .|+|++++++.+..... .+++|||++ +++.+++.... ..+++.....++.++++|+.||
T Consensus 45 ~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~L 123 (287)
T cd07838 45 TLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFL 123 (287)
T ss_pred HHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 33465555444 69999999999887665 889999998 58999887532 3589999999999999999999
Q ss_pred hcCCCCCCeeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHH
Q 040540 520 RHGHSSAPIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMET 575 (669)
Q Consensus 520 h~~~~~~~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el 575 (669)
|. .+++|+|+++.. ......++..|+|||+..+..++.++|||||||++|||
T Consensus 124 H~----~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l 199 (287)
T cd07838 124 HS----HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAEL 199 (287)
T ss_pred HH----CCeeeccCChhhEEEccCCCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHH
Confidence 95 479999988431 01122367889999999888899999999999999999
Q ss_pred HhCCCCCCcCCCCCccHHHHHHHhCC-CC--cc-------ccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC
Q 040540 576 FTRKRPTDEMFTGEMSLRRWVKESLP-HR--LS-------EVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM 645 (669)
Q Consensus 576 ~tg~~p~~~~~~~~~~l~~~~~~~~~-~~--~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp 645 (669)
++|+.||..... ...+......... .. .. .......... . .....+....+.+++.+||+.||++||
T Consensus 200 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~li~~~l~~dp~~Rp 276 (287)
T cd07838 200 FRRRPLFRGTSE-ADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRS-F-KSFVPEICEEGLDLLKKMLTFNPHKRI 276 (287)
T ss_pred HhCCCcccCCCh-HHHHHHHHHHcCCCChHhcCCCcccchhhcccccccc-h-hhhhhhhhHHHHHHHHHHhccCCccCC
Confidence 999988865321 1112222211100 00 00 0000000000 0 001123456778999999999999999
Q ss_pred CHHHHHH
Q 040540 646 HMTDAAA 652 (669)
Q Consensus 646 s~~~v~~ 652 (669)
++.|+++
T Consensus 277 ~~~~il~ 283 (287)
T cd07838 277 SAFEALQ 283 (287)
T ss_pred CHHHHhc
Confidence 9999874
No 356
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.82 E-value=1e-19 Score=201.74 Aligned_cols=270 Identities=21% Similarity=0.320 Sum_probs=139.2
Q ss_pred ChhhHHHHHHHHhhcCCCcc--cccCCCCCCCCCCCccc----------------eeeCCCCCCEEEEEcCCCCCcccc-
Q 040540 7 LTTDQSSLLAFKAHAFDYRS--ALANNWSISYPICSWAG----------------ISCGSRHQRVTALNLSDMGLGGTI- 67 (669)
Q Consensus 7 ~~~~~~~l~~~~~~~~~~~~--~l~~~w~~~~~~c~~~g----------------~~c~~~~~~v~~L~ls~~~l~~~~- 67 (669)
.+.+.+.+++..+.+..|.. .....|+...++|.-.. |.|.. +.|+.+...+.......
T Consensus 61 ~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~--~~vt~l~~~g~~~~~~~~ 138 (754)
T PRK15370 61 SPEEIKSKFECLRMLAFPAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGG--KSVTYTRVTESEQASSAS 138 (754)
T ss_pred CHHHHHHHHHHHHHhcCCchhhccccccCCCCcccccCCcchhhheeeecCCceEEecCC--CcccccccccccccccCC
Confidence 34567788888887855543 33445888888996543 44543 44555555432111000
Q ss_pred -------------------cc--------cc-----cCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccC
Q 040540 68 -------------------PL--------HF-----GNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSF 115 (669)
Q Consensus 68 -------------------~~--------~~-----~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 115 (669)
+. .+ .-..+.+.|+++++.++ .+|..+. +.|+.|+|++|+++ .+
T Consensus 139 ~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sL 214 (754)
T PRK15370 139 GSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SL 214 (754)
T ss_pred CCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cC
Confidence 00 00 01123456666666665 3444443 35666666666666 34
Q ss_pred CccccCCcccccccccccCccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCC
Q 040540 116 PSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQ 195 (669)
Q Consensus 116 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~ 195 (669)
|..+. .+|++|++++|+|+ .+|..+. .+|+.|++++|.+. .+|..+. .+|+.|++++|++. .+|..+. +
T Consensus 215 P~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~ 283 (754)
T PRK15370 215 PENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--E 283 (754)
T ss_pred Chhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--C
Confidence 44332 36666666666665 3444433 24666666666655 4454443 35666666666665 3444332 3
Q ss_pred CCCEEEccCCCCCCCCCccccCCCCCcEEEcccCCCccccchhhhccCCCCCeeecccCcccccCCccccCCCCCCEEeC
Q 040540 196 NLKNLDLADNKLSGLIPPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDL 275 (669)
Q Consensus 196 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l 275 (669)
+|+.|++++|++++ +|..+. ++|+.|++++|.++ .+|..+. ++|++|++++|.+++ +|..+. ++|+.|++
T Consensus 284 sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt-~LP~~l~---~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~L 353 (754)
T PRK15370 284 ELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLT-ALPETLP---PGLKTLEAGENALTS-LPASLP--PELQVLDV 353 (754)
T ss_pred CCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccc-cCCcccc---ccceeccccCCcccc-CChhhc--CcccEEEC
Confidence 56666666666654 233222 24555666666555 3443322 355555666665543 343332 45555666
Q ss_pred CCCCccccCccccCCCCCCCEEEccCCcccc
Q 040540 276 GFNSFSGHIPNTFGNLRHLSVLNVMMNNLTT 306 (669)
Q Consensus 276 s~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 306 (669)
++|.+. .+|..+. ++|+.|++++|+++.
T Consensus 354 s~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~ 381 (754)
T PRK15370 354 SKNQIT-VLPETLP--PTITTLDVSRNALTN 381 (754)
T ss_pred CCCCCC-cCChhhc--CCcCEEECCCCcCCC
Confidence 655554 2333331 345555555555544
No 357
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.82 E-value=1.7e-19 Score=198.51 Aligned_cols=265 Identities=26% Similarity=0.282 Sum_probs=200.5
Q ss_pred EEEEEcCCCCCcccccccccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccccccc
Q 040540 53 VTALNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDY 132 (669)
Q Consensus 53 v~~L~ls~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 132 (669)
-..|+++.++++ .+|+.+. ++|+.|++++|+++. +|. ..++|++|++++|+++ .+|.. .++|+.|+|++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccC
Confidence 457999999998 6777665 489999999999984 564 2578999999999998 45643 46889999999
Q ss_pred cCccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCCCCC
Q 040540 133 NNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGLIP 212 (669)
Q Consensus 133 n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 212 (669)
|.++ .+|..+ .+|+.|++++|.+. .+|.. +++|+.|++++|++++ +|... .+|+.|++++|.+++ +|
T Consensus 272 N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-LP 338 (788)
T PRK15387 272 NPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS-LP 338 (788)
T ss_pred Cchh-hhhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCCCc---ccccccccccCcccc-cc
Confidence 9987 455433 56888999999987 45543 4689999999999985 45422 467889999999985 45
Q ss_pred ccccCCCCCcEEEcccCCCccccchhhhccCCCCCeeecccCcccccCCccccCCCCCCEEeCCCCCccccCccccCCCC
Q 040540 213 PTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGNLR 292 (669)
Q Consensus 213 ~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~ 292 (669)
.. ..+|+.|++++|+++ .+|.. ..+|+.|++++|++.+ +|.. ..+|+.|++++|.+.+ +|.. .+
T Consensus 339 ~l---p~~Lq~LdLS~N~Ls-~LP~l----p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s 402 (788)
T PRK15387 339 TL---PSGLQELSVSDNQLA-SLPTL----PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PS 402 (788)
T ss_pred cc---ccccceEecCCCccC-CCCCC----Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---cc
Confidence 32 257899999999998 46642 3578889999999874 5543 3578999999999885 5543 35
Q ss_pred CCCEEEccCCccccCCCCCcccccccccCCCCCCCEEECcCCCCccccchhHhhhhccccccceEeecCcccCCCCCccc
Q 040540 293 HLSVLNVMMNNLTTESSSADQWSFLSSLTNCRNLSNLALASNPLGGILPQLIGNFSASLQNIYAFELGFNDLNGTIPTSI 372 (669)
Q Consensus 293 ~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~l~~l~l~~n~l~~~~~~~~ 372 (669)
+|+.|++++|+++..+.. ..+|+.|++++|.++ .+|..+.. +..+..+++++|.+++..+..+
T Consensus 403 ~L~~LdLS~N~LssIP~l------------~~~L~~L~Ls~NqLt-~LP~sl~~----L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 403 ELKELMVSGNRLTSLPML------------PSGLLSLSVYRNQLT-RLPESLIH----LSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCCEEEccCCcCCCCCcc------------hhhhhhhhhccCccc-ccChHHhh----ccCCCeEECCCCCCCchHHHHH
Confidence 788999999998765421 235778899999987 45655543 6678899999999998776665
Q ss_pred cc
Q 040540 373 GT 374 (669)
Q Consensus 373 ~~ 374 (669)
..
T Consensus 466 ~~ 467 (788)
T PRK15387 466 RE 467 (788)
T ss_pred HH
Confidence 33
No 358
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.82 E-value=2.8e-20 Score=193.13 Aligned_cols=197 Identities=20% Similarity=0.195 Sum_probs=134.5
Q ss_pred cCchhhhhhccccccccceeccccccc-----cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNP-----DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHG 522 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~ 522 (669)
.+..|+..+..++|+|++++++.+... ...++++||++ +++.+.+.. ..+++.....++.++++|++|||.
T Consensus 49 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~- 124 (336)
T cd07849 49 RTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELME-TDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHS- 124 (336)
T ss_pred HHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcc-cCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh-
Confidence 355688999999999999999876543 34689999997 588888864 458888999999999999999995
Q ss_pred CCCCCeeecCCCCcc----------------------------cccccccccccCccccccC-CCcCccccchhhHHHHH
Q 040540 523 HSSAPIIHCEGEDSV----------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLM 573 (669)
Q Consensus 523 ~~~~~i~h~d~~~~~----------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~ 573 (669)
.+++|+|+++.. ......||..|+|||.+.+ ..++.++|||||||++|
T Consensus 125 ---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~ 201 (336)
T cd07849 125 ---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILA 201 (336)
T ss_pred ---CCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHH
Confidence 479999988430 0011247888999998654 45889999999999999
Q ss_pred HHHhCCCCCCcCCCCCccHHHHHHHhCC----CCccccccccccc------hhhhhh---hhHHHHHHHHHHHhhcccCC
Q 040540 574 ETFTRKRPTDEMFTGEMSLRRWVKESLP----HRLSEVVDTNLVR------EEQAFS---AKMDCLLSIMDLALDCCMES 640 (669)
Q Consensus 574 el~tg~~p~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~------~~~~~~---~~~~~~~~~~~l~~~c~~~~ 640 (669)
||++|+.||.... ......++..... +....+.+..... .....+ ........+.+++.+||+.+
T Consensus 202 el~~G~~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 279 (336)
T cd07849 202 EMLSNRPLFPGKD--YLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFN 279 (336)
T ss_pred HHHhCCCCCCCCC--HHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCC
Confidence 9999999986421 1111111111111 0000000000000 000000 01123456889999999999
Q ss_pred CCCCCCHHHHHHH
Q 040540 641 PDKRMHMTDAAAK 653 (669)
Q Consensus 641 P~~Rps~~~v~~~ 653 (669)
|++|||+.|+++.
T Consensus 280 P~~Rpt~~e~l~h 292 (336)
T cd07849 280 PHKRITVEEALAH 292 (336)
T ss_pred hhhCcCHHHHhcC
Confidence 9999999999874
No 359
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.82 E-value=3e-20 Score=188.61 Aligned_cols=189 Identities=22% Similarity=0.192 Sum_probs=140.5
Q ss_pred cCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|+.++..+ +|++++++++.+......++||||+++|+|.+++... ..+++.....++.++++|+.|||. .
T Consensus 50 ~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~----~ 124 (288)
T cd05583 50 HTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQ----L 124 (288)
T ss_pred HHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHH----C
Confidence 455788888888 5999999999888888889999999999999999753 457888888999999999999994 4
Q ss_pred CeeecCCCCcc--------------------------cccccccccccCccccccCCC--cCccccchhhHHHHHHHHhC
Q 040540 527 PIIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGSEGI--VSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 527 ~i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~Gvil~el~tg 578 (669)
+++|+|+++.. ......|+..|+|||...+.. ++.++||||||+++|||+||
T Consensus 125 ~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg 204 (288)
T cd05583 125 GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTG 204 (288)
T ss_pred CeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhC
Confidence 79999988421 001124788999999887654 78899999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHh
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKI 657 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~ 657 (669)
+.||..... ........+...... + +.+......+.+++.+||+.+|++|||+++|.+.|+..
T Consensus 205 ~~p~~~~~~-~~~~~~~~~~~~~~~------~---------~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 205 ASPFTVDGE-QNSQSEISRRILKSK------P---------PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred CCCcccCcc-cchHHHHHHHHHccC------C---------CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 999854211 111111111111000 0 01112334578999999999999999999888776653
No 360
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.82 E-value=4.2e-20 Score=191.96 Aligned_cols=196 Identities=21% Similarity=0.211 Sum_probs=135.9
Q ss_pred cCchhhhhhccc-cccccceeccccccc--cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSNP--DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
.+..|+..+..+ +|+|+++++++|... ...++||||++ ++|.+++... .+++..+..++.+++.|++|||.
T Consensus 52 ~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~--- 125 (337)
T cd07852 52 RTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHS--- 125 (337)
T ss_pred hhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---
Confidence 455688999999 999999999987653 35789999998 5999998753 68899999999999999999995
Q ss_pred CCCeeecCCCCcc------------------------------cccccccccccCccccccC-CCcCccccchhhHHHHH
Q 040540 525 SAPIIHCEGEDSV------------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLM 573 (669)
Q Consensus 525 ~~~i~h~d~~~~~------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~ 573 (669)
.+++|+|+++.. ......||..|+|||.+.+ ..++.++|||||||++|
T Consensus 126 -~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~ 204 (337)
T cd07852 126 -GNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILG 204 (337)
T ss_pred -CCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHH
Confidence 489999988430 0011247888999998755 45788999999999999
Q ss_pred HHHhCCCCCCcCCCCCccHHHHHHHhCCCC------------ccccccccccchh-hh-hhhhHHHHHHHHHHHhhcccC
Q 040540 574 ETFTRKRPTDEMFTGEMSLRRWVKESLPHR------------LSEVVDTNLVREE-QA-FSAKMDCLLSIMDLALDCCME 639 (669)
Q Consensus 574 el~tg~~p~~~~~~~~~~l~~~~~~~~~~~------------~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~l~~~c~~~ 639 (669)
||+||+.||...... .....+....... ....++ .+.... .. ..........+.+++.+||+.
T Consensus 205 el~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 281 (337)
T cd07852 205 EMLLGKPLFPGTSTL--NQLEKIIEVIGPPSAEDIESIKSPFAATMLD-SLPSRPRKPLDELLPKASDDALDLLKKLLVF 281 (337)
T ss_pred HHHhCCCCCCCCChH--HHHHHHHHHhCCCCHHHHHHHHhhhHHHhhh-hcccccccchhhhccCCCHHHHHHHHHhccC
Confidence 999999998642211 1111111100000 000000 000000 00 000112355688999999999
Q ss_pred CCCCCCCHHHHHHH
Q 040540 640 SPDKRMHMTDAAAK 653 (669)
Q Consensus 640 ~P~~Rps~~~v~~~ 653 (669)
+|++|||+.++++.
T Consensus 282 ~P~~Rps~~~il~~ 295 (337)
T cd07852 282 NPNKRLTAEEALEH 295 (337)
T ss_pred CcccccCHHHHhhC
Confidence 99999999999873
No 361
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.82 E-value=3.7e-20 Score=184.21 Aligned_cols=182 Identities=21% Similarity=0.285 Sum_probs=141.0
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|++.+..++|++++++++++......+++|||+++++|.+++... ..+++..+..++.+++.|+.|+|. .
T Consensus 44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~----~ 118 (254)
T cd06627 44 KSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHE----Q 118 (254)
T ss_pred HHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhh----C
Confidence 35677899999999999999999988888899999999999999999754 568999999999999999999994 4
Q ss_pred CeeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCC
Q 040540 527 PIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 527 ~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
+++|+|+++.. ......|+..|+|||...+..++.++||||+|+++|||++|+.|
T Consensus 119 ~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p 198 (254)
T cd06627 119 GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPP 198 (254)
T ss_pred CcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCC
Confidence 79999988431 00122478889999998877789999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+.... ......+.. .... ..+ +......+.+++.+|+..+|++||++.|++.
T Consensus 199 ~~~~~----~~~~~~~~~-~~~~-~~~-------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 199 YYDLN----PMAALFRIV-QDDH-PPL-------------PEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCcc----HHHHHHHHh-ccCC-CCC-------------CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 86532 111111111 0000 001 1122345679999999999999999999874
No 362
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.82 E-value=2.3e-20 Score=190.21 Aligned_cols=198 Identities=17% Similarity=0.135 Sum_probs=134.2
Q ss_pred cCchhhhhhcccc-ccccceeccccccccc-----cceeeccCCCCChHHhhhcC----CCccCHHHHHHHHHhHHhhhh
Q 040540 448 SFDSECEVLRNVR-HRNLIKIISSCSNPDF-----KALVLEFMPNGSLEKWLYSH----NYFLDILERLNIMIDVGSALE 517 (669)
Q Consensus 448 ~~~~e~~~l~~l~-h~niv~l~~~~~~~~~-----~~lv~ey~~~g~L~~~l~~~----~~~l~~~~~~~i~~~i~~~l~ 517 (669)
.+..|+.++..++ |+|++++++.+..... .+++|||+++ ++.+++... ...+++.....++.|+++||.
T Consensus 46 ~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~ 124 (295)
T cd07837 46 TALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVA 124 (295)
T ss_pred HHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHH
Confidence 4567888898885 6999999988876554 7899999985 898888642 235789999999999999999
Q ss_pred hhhcCCCCCCeeecCCCCccc--------------------------ccccccccccCccccccC-CCcCccccchhhHH
Q 040540 518 YLRHGHSSAPIIHCEGEDSVT--------------------------QTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGV 570 (669)
Q Consensus 518 ~lh~~~~~~~i~h~d~~~~~~--------------------------~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv 570 (669)
|||. .+++|+|+++... .....+++.|+|||++.+ ..++.++|||||||
T Consensus 125 ~LH~----~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ 200 (295)
T cd07837 125 HCHK----HGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGC 200 (295)
T ss_pred HHHH----CCeeecCCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHH
Confidence 9994 4799999884310 011135678999998765 45789999999999
Q ss_pred HHHHHHhCCCCCCcCCCCCccHHHHHHHh-CCCC--cccccc-------ccccchhhhhhhhHHHHHHHHHHHhhcccCC
Q 040540 571 LLMETFTRKRPTDEMFTGEMSLRRWVKES-LPHR--LSEVVD-------TNLVREEQAFSAKMDCLLSIMDLALDCCMES 640 (669)
Q Consensus 571 il~el~tg~~p~~~~~~~~~~l~~~~~~~-~~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~ 640 (669)
++|||++|+.||..... ...+....... .+.. ...... +..... ............+.+++.+|+..|
T Consensus 201 ~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~ 278 (295)
T cd07837 201 IFAEMSRKQPLFPGDSE-LQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQ-DLSRAVPDLSPEGLDLLQKMLRYD 278 (295)
T ss_pred HHHHHHcCCCCCCCCCH-HHHHHHHHHHhCCCChhhCcchhhccchhhcCcccch-hHHHhccccCHHHHHHHHHHccCC
Confidence 99999999999865211 11111111100 0000 000000 000000 000001234566889999999999
Q ss_pred CCCCCCHHHHHH
Q 040540 641 PDKRMHMTDAAA 652 (669)
Q Consensus 641 P~~Rps~~~v~~ 652 (669)
|++||++.|+++
T Consensus 279 P~~R~~~~eil~ 290 (295)
T cd07837 279 PAKRISAKAALT 290 (295)
T ss_pred hhhcCCHHHHhc
Confidence 999999999875
No 363
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.82 E-value=6e-20 Score=187.86 Aligned_cols=199 Identities=21% Similarity=0.177 Sum_probs=135.7
Q ss_pred cCchhhhhhccccccccceecccccccc----------ccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhh
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPD----------FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALE 517 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~----------~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~ 517 (669)
.+..|+.+++.++|||++++++.+.... ..++++||+++ ++.+.+......+++.....++.+++.|++
T Consensus 52 ~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~ 130 (302)
T cd07864 52 TAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLN 130 (302)
T ss_pred HHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 3456888999999999999999886544 67899999985 787777765556899999999999999999
Q ss_pred hhhcCCCCCCeeecCCCCccc--------------------------ccccccccccCccccccC-CCcCccccchhhHH
Q 040540 518 YLRHGHSSAPIIHCEGEDSVT--------------------------QTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGV 570 (669)
Q Consensus 518 ~lh~~~~~~~i~h~d~~~~~~--------------------------~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv 570 (669)
|||+ .+++|+|+++... .....++..|+|||.+.+ ..++.++|||||||
T Consensus 131 ~LH~----~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~ 206 (302)
T cd07864 131 YCHK----KNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGC 206 (302)
T ss_pred HHHh----CCeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHH
Confidence 9995 4799999884310 011235678999998765 45788999999999
Q ss_pred HHHHHHhCCCCCCcCCCCCccHHHHHHH---hCCCCcccccccc--------ccchhhhhhhhHHHHHHHHHHHhhcccC
Q 040540 571 LLMETFTRKRPTDEMFTGEMSLRRWVKE---SLPHRLSEVVDTN--------LVREEQAFSAKMDCLLSIMDLALDCCME 639 (669)
Q Consensus 571 il~el~tg~~p~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~c~~~ 639 (669)
++|||++|+.||.... ....+...... ..+.......... ..............+..+.+++.+||+.
T Consensus 207 ~~~el~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 285 (302)
T cd07864 207 ILGELFTKKPIFQANQ-ELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTL 285 (302)
T ss_pred HHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccC
Confidence 9999999999986421 11111111111 1011011000000 0000000000112345788999999999
Q ss_pred CCCCCCCHHHHHH
Q 040540 640 SPDKRMHMTDAAA 652 (669)
Q Consensus 640 ~P~~Rps~~~v~~ 652 (669)
+|++||++.+++.
T Consensus 286 ~P~~Rp~~~~il~ 298 (302)
T cd07864 286 DPSKRCTAEEALN 298 (302)
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999874
No 364
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.82 E-value=4e-20 Score=191.64 Aligned_cols=206 Identities=22% Similarity=0.208 Sum_probs=144.3
Q ss_pred ccCchhhhhhccccccccceecccccccc-----ccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhc
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPD-----FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
+.+..|+..+..++|+|++++++.+.... ..+++|||++ ++|.+++.+. ..+++.....++.++++|++|||.
T Consensus 44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~LH~ 121 (330)
T cd07834 44 KRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSP-QPLTDDHIQYFLYQILRGLKYLHS 121 (330)
T ss_pred hhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 45667899999999999999999987764 6789999998 5899998754 378999999999999999999995
Q ss_pred CCCCCCeeecCCCCcc----------------------------cccccccccccCccccccCC-CcCccccchhhHHHH
Q 040540 522 GHSSAPIIHCEGEDSV----------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLL 572 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil 572 (669)
.+++|+|+++.. ......++..|+|||++.+. .++.++||||||+++
T Consensus 122 ----~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il 197 (330)
T cd07834 122 ----ANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIF 197 (330)
T ss_pred ----CCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHH
Confidence 479999988430 01122478889999999877 789999999999999
Q ss_pred HHHHhCCCCCCcCCCCCccHHHHHHHhCCCC----c--------cccccccc-cchhhhhhhhHHHHHHHHHHHhhcccC
Q 040540 573 METFTRKRPTDEMFTGEMSLRRWVKESLPHR----L--------SEVVDTNL-VREEQAFSAKMDCLLSIMDLALDCCME 639 (669)
Q Consensus 573 ~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~----~--------~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~c~~~ 639 (669)
|||++|+.||..... ......+....... . .+.+.... ................+.+++.+||+.
T Consensus 198 ~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 275 (330)
T cd07834 198 AELLTRKPLFPGRDY--IDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVF 275 (330)
T ss_pred HHHHcCCCCcCCCCH--HHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccC
Confidence 999999999865321 11111111110000 0 00000000 000000000112356788999999999
Q ss_pred CCCCCCCHHHHHHH--HHHhHHH
Q 040540 640 SPDKRMHMTDAAAK--LKKIKVK 660 (669)
Q Consensus 640 ~P~~Rps~~~v~~~--l~~~~~~ 660 (669)
+|++||++.++++. +++++..
T Consensus 276 ~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 276 DPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred ChhhCCCHHHHHhCccHHhhccc
Confidence 99999999999873 6655543
No 365
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.82 E-value=4.6e-20 Score=200.62 Aligned_cols=200 Identities=14% Similarity=0.128 Sum_probs=134.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCC----CccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN----YFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
.+..|+.++..++|+|++++++++...+..++++|++. +++.+++.... ......+...|+.|++.||+|||.
T Consensus 209 ~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~-- 285 (501)
T PHA03210 209 QLENEILALGRLNHENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD-- 285 (501)
T ss_pred HHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh--
Confidence 46679999999999999999999998888999999985 68888875421 112244566899999999999994
Q ss_pred CCCCeeecCCCCcc--------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 524 SSAPIIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 524 ~~~~i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
.+|+|||+|+.. ......||..|+|||++.+..++.++|||||||++|||++
T Consensus 286 --~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~ 363 (501)
T PHA03210 286 --KKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLS 363 (501)
T ss_pred --CCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHH
Confidence 479999999430 0112358999999999998889999999999999999999
Q ss_pred CCCC-CCcCCCCC-ccHHHHHHH------hCCCCcc---cccccc-ccc---hhhhhhhhHHHHHHHHHHHhhcccCCCC
Q 040540 578 RKRP-TDEMFTGE-MSLRRWVKE------SLPHRLS---EVVDTN-LVR---EEQAFSAKMDCLLSIMDLALDCCMESPD 642 (669)
Q Consensus 578 g~~p-~~~~~~~~-~~l~~~~~~------~~~~~~~---~~~~~~-~~~---~~~~~~~~~~~~~~~~~l~~~c~~~~P~ 642 (669)
|+.+ +....... ..+...+.. .++.... +.++.. +.. ..+..-.......++.+++.+|++.||.
T Consensus 364 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~ 443 (501)
T PHA03210 364 HDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWH 443 (501)
T ss_pred CCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcc
Confidence 9854 43221111 112111111 1111000 000000 000 0000000111234567889999999999
Q ss_pred CCCCHHHHHH
Q 040540 643 KRMHMTDAAA 652 (669)
Q Consensus 643 ~Rps~~~v~~ 652 (669)
+|||+.|+++
T Consensus 444 ~Rpsa~elL~ 453 (501)
T PHA03210 444 LRPGAAELLA 453 (501)
T ss_pred cCcCHHHHhh
Confidence 9999999986
No 366
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.81 E-value=5.6e-20 Score=186.03 Aligned_cols=197 Identities=20% Similarity=0.158 Sum_probs=139.4
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..++.++|+|++++++.+......++||||++ ++|.+++.+....+++..+..++.++++|+.|||.. +
T Consensus 44 ~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~----~ 118 (282)
T cd07829 44 TALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH----R 118 (282)
T ss_pred HHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC----C
Confidence 44568889999999999999999998889999999998 599999986545689999999999999999999954 7
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCC-CcCccccchhhHHHHHHHHhCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
++|+|+++.. ......++..|+|||...+. .++.++|||||||++||+++|+.|
T Consensus 119 i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~ 198 (282)
T cd07829 119 ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPL 198 (282)
T ss_pred cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCC
Confidence 9999988431 00112346779999988766 788999999999999999999999
Q ss_pred CCcCCCCCccHHHHHHHhCC----CCc--------cccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 582 TDEMFTGEMSLRRWVKESLP----HRL--------SEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 582 ~~~~~~~~~~l~~~~~~~~~----~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
|..... ......+..... ..+ .+..-+........ .........+.+++.+||..+|++||++.+
T Consensus 199 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ 275 (282)
T cd07829 199 FPGDSE--IDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLE-KVLPRLDPEGIDLLSKMLQYNPAKRISAKE 275 (282)
T ss_pred CCCccH--HHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchH-HhcccccHHHHHHHHHhhccCcccCCCHHH
Confidence 865221 111111100000 000 00000000000000 001122456899999999999999999999
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
++.
T Consensus 276 ~l~ 278 (282)
T cd07829 276 ALK 278 (282)
T ss_pred Hhh
Confidence 875
No 367
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.81 E-value=5.5e-20 Score=189.43 Aligned_cols=200 Identities=15% Similarity=0.125 Sum_probs=135.6
Q ss_pred cCchhhhhhccccccccceeccccccc--cccceeeccCCCCChHHhhhcC----CCccCHHHHHHHHHhHHhhhhhhhc
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNP--DFKALVLEFMPNGSLEKWLYSH----NYFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~----~~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
.+..|+.++..++|||++++++++... ...++||||++ +++.+++... ...++......|+.|+++|+.|||.
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 126 (316)
T cd07842 48 SACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS 126 (316)
T ss_pred HHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh
Confidence 345688899999999999999999877 77899999997 4777776532 2357888888999999999999994
Q ss_pred CCCCCCeeecCCCCccc--------------------------------ccccccccccCccccccC-CCcCccccchhh
Q 040540 522 GHSSAPIIHCEGEDSVT--------------------------------QTTTMATIGYMAPEYGSE-GIVSAKCDVYSY 568 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~~--------------------------------~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~ 568 (669)
.+++|+|+++... .....++..|+|||+..+ ..++.++|||||
T Consensus 127 ----~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~sl 202 (316)
T cd07842 127 ----NWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAI 202 (316)
T ss_pred ----CCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHH
Confidence 4799999883210 001135778999998766 458899999999
Q ss_pred HHHHHHHHhCCCCCCcCCCCC--------ccHHHHHHHhCCC------------Cccc---ccc-cccc--chhhhhhhh
Q 040540 569 GVLLMETFTRKRPTDEMFTGE--------MSLRRWVKESLPH------------RLSE---VVD-TNLV--REEQAFSAK 622 (669)
Q Consensus 569 Gvil~el~tg~~p~~~~~~~~--------~~l~~~~~~~~~~------------~~~~---~~~-~~~~--~~~~~~~~~ 622 (669)
||+++||++|+.||....... ..+...+...-+. .... ... .... ......+..
T Consensus 203 G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (316)
T cd07842 203 GCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKH 282 (316)
T ss_pred HHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhc
Confidence 999999999999997533221 0111111110000 0000 000 0000 000000001
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 623 MDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 623 ~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
......+.+++.+|++.||++|||+.|+++
T Consensus 283 ~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 283 KKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred cCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 134456889999999999999999999874
No 368
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.81 E-value=4.1e-20 Score=190.84 Aligned_cols=177 Identities=21% Similarity=0.221 Sum_probs=134.9
Q ss_pred Cchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 449 FDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 449 ~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
-..|+.+.... .|+|+++..+.+......++|||++.+|.+.+.+..... ...++..|+.+++.|+.|||. .+
T Consensus 362 ~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~--~~~e~~~w~~~lv~Av~~LH~----~g 435 (612)
T KOG0603|consen 362 NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPE--FCSEASQWAAELVSAVDYLHE----QG 435 (612)
T ss_pred cccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcch--hHHHHHHHHHHHHHHHHHHHh----cC
Confidence 33455444444 799999999999999999999999999999888875333 226777899999999999994 58
Q ss_pred eeecCCCCccccc-----------------------ccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCc
Q 040540 528 IIHCEGEDSVTQT-----------------------TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE 584 (669)
Q Consensus 528 i~h~d~~~~~~~~-----------------------~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 584 (669)
++|||+|+..... +.+-|..|.|||+.....|++++||||+||+||||++|+.||..
T Consensus 436 vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~ 515 (612)
T KOG0603|consen 436 VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAA 515 (612)
T ss_pred eeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCcccc
Confidence 9999999652111 11346789999999988899999999999999999999999976
Q ss_pred CCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 585 MFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 585 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
-..+ ..+...+. .. +.....+..+++++.+|++.||.+||+|.++..
T Consensus 516 ~P~~-~ei~~~i~---~~-----------------~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 516 HPAG-IEIHTRIQ---MP-----------------KFSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred CCch-HHHHHhhc---CC-----------------ccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 3322 11111111 00 012345567899999999999999999999854
No 369
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.81 E-value=8.8e-20 Score=190.76 Aligned_cols=195 Identities=20% Similarity=0.163 Sum_probs=134.6
Q ss_pred cCchhhhhhccccccccceeccccccc------cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhc
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNP------DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
.+..|+..+..++|+|++++++++... ...++||||++ ++|.+.+... ++......++.|+++|++|||.
T Consensus 61 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~ 136 (353)
T cd07850 61 RAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHS 136 (353)
T ss_pred HHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHh
Confidence 344688899999999999999887543 24589999997 5888888642 7888888999999999999995
Q ss_pred CCCCCCeeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 522 GHSSAPIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
.+++|+|+|+.. ......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 137 ----~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~ 212 (353)
T cd07850 137 ----AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR 212 (353)
T ss_pred ----CCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHH
Confidence 479999998431 0112247889999999988889999999999999999999
Q ss_pred CCCCCCcCCCCCccHHH----------------------HHHHhCCC---CccccccccccchhhhhhhhHHHHHHHHHH
Q 040540 578 RKRPTDEMFTGEMSLRR----------------------WVKESLPH---RLSEVVDTNLVREEQAFSAKMDCLLSIMDL 632 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~----------------------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 632 (669)
|+.||...... ..... +....... .+.......+... .....+......+.++
T Consensus 213 g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l 290 (353)
T cd07850 213 GTVLFPGTDHI-DQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPP-DSESHNKLKASQARDL 290 (353)
T ss_pred CCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCc-ccccccccchhHHHHH
Confidence 99998643110 00000 00000000 0000000000000 0000012345567899
Q ss_pred HhhcccCCCCCCCCHHHHHH
Q 040540 633 ALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 633 ~~~c~~~~P~~Rps~~~v~~ 652 (669)
+.+|++.||++|||+.|+++
T Consensus 291 i~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 291 LSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HHHHcCCChhhCcCHHHHhc
Confidence 99999999999999999985
No 370
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.81 E-value=8.2e-20 Score=182.91 Aligned_cols=182 Identities=19% Similarity=0.209 Sum_probs=136.1
Q ss_pred ccCchhhhhhccccccccceeccccccc--cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNP--DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
..+..|+..++.++|+|++++++++... ...++++||+++++|.+++... ..+++.....++.+++.|+.|||.
T Consensus 49 ~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~al~~LH~--- 124 (264)
T cd06653 49 NALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAY-GALTENVTRRYTRQILQGVSYLHS--- 124 (264)
T ss_pred HHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh---
Confidence 3566789999999999999999987653 4467899999999999999753 347888899999999999999994
Q ss_pred CCCeeecCCCCcc----------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHH
Q 040540 525 SAPIIHCEGEDSV----------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 525 ~~~i~h~d~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~ 576 (669)
.+++|+|+++.. ......|+..|+|||+..+..++.++|||||||++||++
T Consensus 125 -~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 203 (264)
T cd06653 125 -NMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEML 203 (264)
T ss_pred -CCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHH
Confidence 479999988320 001124788999999998888899999999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+|+.||..... .....+..... .... .+......+.+++.+|++ +|..||++.+++.
T Consensus 204 ~g~~p~~~~~~----~~~~~~~~~~~-~~~~-------------~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 204 TEKPPWAEYEA----MAAIFKIATQP-TKPM-------------LPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred hCCCCCCccCH----HHHHHHHHcCC-CCCC-------------CCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 99999865311 11111111000 0000 122334567899999999 5799999998754
No 371
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.81 E-value=7.8e-20 Score=187.85 Aligned_cols=197 Identities=20% Similarity=0.161 Sum_probs=133.8
Q ss_pred cCchhhhhhccccccccceeccccccc--------cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhh
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNP--------DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 519 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~--------~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~l 519 (669)
.+.+|+..++.++|+|++++++.+... ...++|+||+. +++.+.+......+++.....++.++++|+.||
T Consensus 53 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~l 131 (311)
T cd07866 53 TALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD-HDLSGLLENPSVKLTESQIKCYMLQLLEGINYL 131 (311)
T ss_pred hHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCC-cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHH
Confidence 345789999999999999999876442 24589999997 478888776556789999999999999999999
Q ss_pred hcCCCCCCeeecCCCCccc------------------------------------ccccccccccCccccccC-CCcCcc
Q 040540 520 RHGHSSAPIIHCEGEDSVT------------------------------------QTTTMATIGYMAPEYGSE-GIVSAK 562 (669)
Q Consensus 520 h~~~~~~~i~h~d~~~~~~------------------------------------~~~~~gt~~y~aPE~~~~-~~~~~~ 562 (669)
|. .+++|+|+++... .+...|++.|+|||...+ ..++.+
T Consensus 132 H~----~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 207 (311)
T cd07866 132 HE----NHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTA 207 (311)
T ss_pred Hh----CCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCch
Confidence 94 4799999884200 011135777999998765 458899
Q ss_pred ccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHh--CCC-------Cccc----cccccccchhhhhhhhHHHHHHH
Q 040540 563 CDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKES--LPH-------RLSE----VVDTNLVREEQAFSAKMDCLLSI 629 (669)
Q Consensus 563 ~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~--~~~-------~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 629 (669)
+|||||||++|||++|+.||...... .......... .++ .+.. .......... ..........+
T Consensus 208 ~Dv~slG~il~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 284 (311)
T cd07866 208 VDIWGIGCVFAEMFTRRPILQGKSDI-DQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTL--EERFGKLGPEG 284 (311)
T ss_pred hHhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccH--HHHcccCChhH
Confidence 99999999999999999998643211 0111111100 000 0000 0000000000 00011223567
Q ss_pred HHHHhhcccCCCCCCCCHHHHHH
Q 040540 630 MDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 630 ~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
.+++.+|++.||++|||+.|++.
T Consensus 285 ~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 285 LDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHHHcccCcccCcCHHHHhc
Confidence 89999999999999999999864
No 372
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.80 E-value=1.2e-19 Score=188.40 Aligned_cols=197 Identities=18% Similarity=0.195 Sum_probs=138.1
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|+|++++++++......+++|||++ |+|.+++.. ...+++.....++.++++|++|||. .+
T Consensus 66 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~----~~ 139 (335)
T PTZ00024 66 TTLRELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHK----WY 139 (335)
T ss_pred hHHHHHHHHHhCCCcceeeeeEEEecCCcEEEEEeccc-cCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 35578899999999999999999988889999999997 699999874 3458888999999999999999994 47
Q ss_pred eeecCCCCcc--------------------c-------------------ccccccccccCccccccCC-CcCccccchh
Q 040540 528 IIHCEGEDSV--------------------T-------------------QTTTMATIGYMAPEYGSEG-IVSAKCDVYS 567 (669)
Q Consensus 528 i~h~d~~~~~--------------------~-------------------~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s 567 (669)
++|+|+++.. . .....++..|+|||++.+. .++.++||||
T Consensus 140 i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s 219 (335)
T PTZ00024 140 FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWS 219 (335)
T ss_pred eecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHH
Confidence 9999988430 0 0011357789999988764 4789999999
Q ss_pred hHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCC----CCccccc-----cccccchhhhh-hhhHHHHHHHHHHHhhcc
Q 040540 568 YGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLP----HRLSEVV-----DTNLVREEQAF-SAKMDCLLSIMDLALDCC 637 (669)
Q Consensus 568 ~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~l~~~c~ 637 (669)
+||++|||+||+.||..... ......+..... ..+.... .+......... .........+.+++.+|+
T Consensus 220 lG~~l~el~tg~~p~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 297 (335)
T PTZ00024 220 VGCIFAELLTGKPLFPGENE--IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLL 297 (335)
T ss_pred HHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHc
Confidence 99999999999999865321 111111111110 0000000 00000000000 001123456789999999
Q ss_pred cCCCCCCCCHHHHHH
Q 040540 638 MESPDKRMHMTDAAA 652 (669)
Q Consensus 638 ~~~P~~Rps~~~v~~ 652 (669)
+.+|++||++.|++.
T Consensus 298 ~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 298 KLNPLERISAKEALK 312 (335)
T ss_pred CCCchhccCHHHHhc
Confidence 999999999999975
No 373
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.80 E-value=1.5e-19 Score=187.71 Aligned_cols=202 Identities=21% Similarity=0.194 Sum_probs=138.2
Q ss_pred cCchhhhhhccccccccceeccccccc-----cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNP-----DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHG 522 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~ 522 (669)
.+..|+..+..++|+|++++++++... ...+++|||+. ++|.+++... ..+++.....++.++++|+.|||.
T Consensus 50 ~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~- 126 (337)
T cd07858 50 RTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHS- 126 (337)
T ss_pred HHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh-
Confidence 344688899999999999999887543 34689999997 7899998753 458899999999999999999994
Q ss_pred CCCCCeeecCCCCcc-------------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHH
Q 040540 523 HSSAPIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 523 ~~~~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~ 576 (669)
.+++|+|+++.. ......|+..|+|||.+.. ..++.++|||||||++|||+
T Consensus 127 ---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~ 203 (337)
T cd07858 127 ---ANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELL 203 (337)
T ss_pred ---CCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHH
Confidence 479999988431 0012247888999998765 45889999999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHHhCC----CCccccccccc-------cc-h-hhhhhhhHHHHHHHHHHHhhcccCCCCC
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKESLP----HRLSEVVDTNL-------VR-E-EQAFSAKMDCLLSIMDLALDCCMESPDK 643 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~-------~~-~-~~~~~~~~~~~~~~~~l~~~c~~~~P~~ 643 (669)
+|+.||..... ............ +....+.+... .. . ........+.+..+.+++.+|++.+|++
T Consensus 204 ~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 281 (337)
T cd07858 204 GRKPLFPGKDY--VHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSK 281 (337)
T ss_pred cCCCCCCCCCh--HHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhh
Confidence 99999865321 000000000000 00000000000 00 0 0000011245567889999999999999
Q ss_pred CCCHHHHHHH--HHHh
Q 040540 644 RMHMTDAAAK--LKKI 657 (669)
Q Consensus 644 Rps~~~v~~~--l~~~ 657 (669)
|||++|+++- ++.+
T Consensus 282 Rps~~ell~h~~~~~~ 297 (337)
T cd07858 282 RITVEEALAHPYLASL 297 (337)
T ss_pred ccCHHHHHcCcchhhh
Confidence 9999999874 5443
No 374
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.80 E-value=7.5e-20 Score=190.42 Aligned_cols=196 Identities=21% Similarity=0.202 Sum_probs=135.4
Q ss_pred cCchhhhhhccccccccceeccccccccc------cceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhc
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDF------KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
.+..|+..++.++|+|++++.+.+..... .++|+||+ +++|.+++.. ..+++.....++.++++|++|||.
T Consensus 60 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~ 136 (343)
T cd07851 60 RTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHS 136 (343)
T ss_pred HHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34568889999999999999887765544 78999998 5799999875 458999999999999999999994
Q ss_pred CCCCCCeeecCCCCcc----------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhC
Q 040540 522 GHSSAPIIHCEGEDSV----------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~----------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg 578 (669)
.+++|+|+++.. ......++..|+|||...+ ..++.++|||||||++||++||
T Consensus 137 ----~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg 212 (343)
T cd07851 137 ----AGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 212 (343)
T ss_pred ----CCeecCCCCHHHeEECCCCCEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhC
Confidence 479999998531 0112347888999998765 3578999999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCcccc------------ccccccchhhhhh-hhHHHHHHHHHHHhhcccCCCCCCC
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEV------------VDTNLVREEQAFS-AKMDCLLSIMDLALDCCMESPDKRM 645 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~-~~~~~~~~~~~l~~~c~~~~P~~Rp 645 (669)
+.||..... ...+.. .....+....+. +.........++. ........+.+++.+|++.+|++||
T Consensus 213 ~~pf~~~~~-~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rp 290 (343)
T cd07851 213 KTLFPGSDH-IDQLKR-IMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRI 290 (343)
T ss_pred CCCCCCCCh-HHHHHH-HHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCC
Confidence 999864221 111111 111110000000 0000000000000 0112356788999999999999999
Q ss_pred CHHHHHH
Q 040540 646 HMTDAAA 652 (669)
Q Consensus 646 s~~~v~~ 652 (669)
|+.||++
T Consensus 291 t~~ell~ 297 (343)
T cd07851 291 TAAEALA 297 (343)
T ss_pred CHHHHhc
Confidence 9999976
No 375
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.80 E-value=3.4e-20 Score=190.32 Aligned_cols=180 Identities=22% Similarity=0.282 Sum_probs=141.5
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+.+|+++|..+.|||||+++.+.......|+||||+.+|.+++++.+++.. .......++.|+.+|++|+|. ..
T Consensus 101 k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~-~e~~ar~~F~q~vsaveYcH~----k~ 175 (596)
T KOG0586|consen 101 KLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRM-KEKEARAKFRQIVSAVEYCHS----KN 175 (596)
T ss_pred HHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccc-hhhhhhhhhHHHHHHHHHHhh----cc
Confidence 4678999999999999999999999999999999999999999999976654 447777888999999999994 57
Q ss_pred eeecCCCCc------------------------ccccccccccccCccccccCCCc-CccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDS------------------------VTQTTTMATIGYMAPEYGSEGIV-SAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~------------------------~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
|+|||+|.. ....+.+|++.|.|||++.+..| ++++|+||+||++|-++.|..||
T Consensus 176 ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPF 255 (596)
T KOG0586|consen 176 IVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPF 255 (596)
T ss_pred eeccccchhhcccccccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeeccccc
Confidence 999999832 11234469999999999998765 57899999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
++..-.. + .+.......+. +--...++.+++.+.+..+|.+|+++.++.+
T Consensus 256 DG~~lk~--L----------------r~rvl~gk~rI--p~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 256 DGQNLKE--L----------------RPRVLRGKYRI--PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred CCccccc--c----------------cchheeeeecc--cceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 8632111 0 01111111111 1123345779999999999999999999876
No 376
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.80 E-value=1.6e-19 Score=174.97 Aligned_cols=202 Identities=21% Similarity=0.209 Sum_probs=142.4
Q ss_pred chhhhhhccccccc-cceecccccccc------ccceeeccCCCCChHHhhhcCC---CccCHHHHHHHHHhHHhhhhhh
Q 040540 450 DSECEVLRNVRHRN-LIKIISSCSNPD------FKALVLEFMPNGSLEKWLYSHN---YFLDILERLNIMIDVGSALEYL 519 (669)
Q Consensus 450 ~~e~~~l~~l~h~n-iv~l~~~~~~~~------~~~lv~ey~~~g~L~~~l~~~~---~~l~~~~~~~i~~~i~~~l~~l 519 (669)
.+|+.++..++|+| ++.+.+.+...+ ..++|+||++ .+|.+++.... ..++......++.|+.+|++||
T Consensus 58 iREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~ 136 (323)
T KOG0594|consen 58 IREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFL 136 (323)
T ss_pred hHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHH
Confidence 46899999999999 999999987766 6789999997 69999998644 3467677889999999999999
Q ss_pred hcCCCCCCeeecCCCCc-------------------------ccccccccccccCccccccCC-CcCccccchhhHHHHH
Q 040540 520 RHGHSSAPIIHCEGEDS-------------------------VTQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLM 573 (669)
Q Consensus 520 h~~~~~~~i~h~d~~~~-------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~ 573 (669)
|. .+|+|||+|+. ...+..++|..|.|||++.+. .|+...|+||+|||+.
T Consensus 137 H~----~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfa 212 (323)
T KOG0594|consen 137 HS----HGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFA 212 (323)
T ss_pred Hh----CCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHH
Confidence 94 58999999954 123445689999999999886 5999999999999999
Q ss_pred HHHhCCCCCCcCCCCCccHHHHHH-HhCC--CCccccc---ccc-----ccchhhhhhhhHHHHHHHHHHHhhcccCCCC
Q 040540 574 ETFTRKRPTDEMFTGEMSLRRWVK-ESLP--HRLSEVV---DTN-----LVREEQAFSAKMDCLLSIMDLALDCCMESPD 642 (669)
Q Consensus 574 el~tg~~p~~~~~~~~~~l~~~~~-~~~~--~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~ 642 (669)
||++++.-|.+... ..++..-.+ -+.| ..+.... +-. ..+...-.........+..+++.+|++.+|.
T Consensus 213 Em~~~~~LFpG~se-~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~ 291 (323)
T KOG0594|consen 213 EMFTRRPLFPGDSE-IDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPA 291 (323)
T ss_pred HHHhCCCCCCCCcH-HHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcc
Confidence 99998877765322 111111111 1111 1111111 000 0000000000111124788999999999999
Q ss_pred CCCCHHHHHHH--HHHh
Q 040540 643 KRMHMTDAAAK--LKKI 657 (669)
Q Consensus 643 ~Rps~~~v~~~--l~~~ 657 (669)
+|.|++.+++. +..+
T Consensus 292 ~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 292 KRISAKGALTHPYFSEL 308 (323)
T ss_pred cCcCHHHHhcChhhccc
Confidence 99999999875 5444
No 377
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.80 E-value=1e-19 Score=187.92 Aligned_cols=199 Identities=20% Similarity=0.188 Sum_probs=135.4
Q ss_pred ccCchhhhhhccccccccceecccccc-ccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSN-PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+.+..|+.++..++|||++++.+++.. ....++++||+. ++|.++++. ..+++.....++.++++|+.|||.
T Consensus 54 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~---- 126 (328)
T cd07856 54 KRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLG-TDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHS---- 126 (328)
T ss_pred HHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehhc-cCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh----
Confidence 345678999999999999999998765 456789999985 689888864 346777888899999999999995
Q ss_pred CCeeecCCCCcc----------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCCCC
Q 040540 526 APIIHCEGEDSV----------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 526 ~~i~h~d~~~~~----------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
.+++|+|+++.. ......++..|+|||.+.+ ..++.++|||||||++|||+||+.||
T Consensus 127 ~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f 206 (328)
T cd07856 127 AGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLF 206 (328)
T ss_pred CCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCC
Confidence 479999988431 0112246788999998765 56899999999999999999999998
Q ss_pred CcCCCCCccHHHHHHH--hCCCCcc-ccccc-------cccc-hh-hhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 040540 583 DEMFTGEMSLRRWVKE--SLPHRLS-EVVDT-------NLVR-EE-QAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~--~~~~~~~-~~~~~-------~~~~-~~-~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v 650 (669)
...... .....+.+. ..++++. ...+. .+.. .. +...........+.+++.+|++.+|++||++.++
T Consensus 207 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~el 285 (328)
T cd07856 207 PGKDHV-NQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEA 285 (328)
T ss_pred CCCCHH-HHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 653210 001000000 0000000 00000 0000 00 0000011234678899999999999999999999
Q ss_pred HHH
Q 040540 651 AAK 653 (669)
Q Consensus 651 ~~~ 653 (669)
+..
T Consensus 286 l~~ 288 (328)
T cd07856 286 LAH 288 (328)
T ss_pred hcC
Confidence 764
No 378
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.80 E-value=1.1e-19 Score=184.92 Aligned_cols=183 Identities=16% Similarity=0.121 Sum_probs=126.7
Q ss_pred hhhccccccccceecccccccc----ccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCee
Q 040540 454 EVLRNVRHRNLIKIISSCSNPD----FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPII 529 (669)
Q Consensus 454 ~~l~~l~h~niv~l~~~~~~~~----~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~ 529 (669)
..+..+.|++++.+++++.... ..++++|++. .++.+.+... ...++.....|+.++++|++|+|. .+++
T Consensus 75 ~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~----~~ii 148 (294)
T PHA02882 75 KNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHE----HGIS 148 (294)
T ss_pred HHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhc-cCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHh----CCee
Confidence 3455678999999988665432 3356777764 3666666532 235677788999999999999994 4799
Q ss_pred ecCCCCcc--------------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 530 HCEGEDSV--------------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 530 h~d~~~~~--------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
|||+|+.. ......||+.|+|||+..+..++.++|||||||++|||++
T Consensus 149 HrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~ 228 (294)
T PHA02882 149 HGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAG 228 (294)
T ss_pred cCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence 99998430 0011248999999999998889999999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKL 654 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l 654 (669)
|+.||....... .+.......+..++. ...+ ....++..+.+++..||..+|++||++.++.+.+
T Consensus 229 g~~P~~~~~~~~-~~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 229 IKLPWKGFGHNG-NLIHAAKCDFIKRLH---EGKI--------KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred CCCCCCccccch-HHHHHhHHHHHHHhh---hhhh--------ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 999997642211 111111110000000 0000 0112245678999999999999999999998875
No 379
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.80 E-value=1.5e-19 Score=183.62 Aligned_cols=184 Identities=21% Similarity=0.179 Sum_probs=134.8
Q ss_pred cCchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+..|+.++..+ +|++++++++.+..+...++||||+++++|.+++... ..+++.....++.++++|+.|||. .
T Consensus 50 ~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~----~ 124 (290)
T cd05613 50 HTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHK----L 124 (290)
T ss_pred HHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh----C
Confidence 455688888888 5899999999888888889999999999999999753 457888888899999999999995 4
Q ss_pred CeeecCCCCcc--------------------------cccccccccccCccccccC--CCcCccccchhhHHHHHHHHhC
Q 040540 527 PIIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGSE--GIVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 527 ~i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~el~tg 578 (669)
+++|+|+++.. ......|+..|+|||.... ..++.++||||||+++|||+||
T Consensus 125 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g 204 (290)
T cd05613 125 GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTG 204 (290)
T ss_pred CeeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcC
Confidence 79999988430 0012247889999998865 3477899999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM-----HMTDAAA 652 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp-----s~~~v~~ 652 (669)
+.||.... ................ + +.+......+.+++.+||+.+|++|| ++.++..
T Consensus 205 ~~p~~~~~-~~~~~~~~~~~~~~~~------~---------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 205 ASPFTVDG-EKNSQAEISRRILKSE------P---------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred CCCCCcCC-ccccHHHHHHHhhccC------C---------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 99986421 1111222221111000 0 01122345678999999999999997 5555544
No 380
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.80 E-value=8.1e-20 Score=181.33 Aligned_cols=177 Identities=23% Similarity=0.178 Sum_probs=137.9
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..++.++|+|++++++.+......+++|||+++++|.+++... ..+++.....++.++++|+.|+|. .+
T Consensus 39 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~----~~ 113 (250)
T cd05123 39 HTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKE-GRFSEERARFYAAEIVLALEYLHS----LG 113 (250)
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH----CC
Confidence 5667888999999999999999999899999999999999999999754 358999999999999999999994 57
Q ss_pred eeecCCCCcc-------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 528 IIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 528 i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
++|+|+++.. ......|+..|++||...+...+.++|+||||+++||+++|+.||
T Consensus 114 ~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~ 193 (250)
T cd05123 114 IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPF 193 (250)
T ss_pred ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 9999988531 011224788999999998888889999999999999999999999
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
..... ..+...+.. ... +.+......+.+++.+||..||++||++.+
T Consensus 194 ~~~~~--~~~~~~~~~---~~~---------------~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 194 YAEDR--KEIYEKILK---DPL---------------RFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCH--HHHHHHHhc---CCC---------------CCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 65321 111111111 000 001112345689999999999999999954
No 381
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.80 E-value=2.2e-21 Score=187.87 Aligned_cols=293 Identities=21% Similarity=0.210 Sum_probs=214.2
Q ss_pred EEcCCCCCcccccccccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccccccc-cC
Q 040540 56 LNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDY-NN 134 (669)
Q Consensus 56 L~ls~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-n~ 134 (669)
.+-++.++. .+|..+- .....++|..|.|+.+.|.+|+.+++||.||||+|+|+..-|+.|.+|.+|..|-+-+ |+
T Consensus 51 VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 51 VDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred EEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 455555554 3444332 2467899999999988889999999999999999999988999999999998877766 99
Q ss_pred ccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCC-----
Q 040540 135 FTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSG----- 209 (669)
Q Consensus 135 l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~----- 209 (669)
|+......|++|..|+.|.+.-|++.......|..|++|..|.+..|.+...--..|..+..++.+.+..|.+-.
T Consensus 128 I~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~ 207 (498)
T KOG4237|consen 128 ITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLP 207 (498)
T ss_pred hhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccc
Confidence 997666789999999999999999999999999999999999999999986555589999999999988887421
Q ss_pred -------CCCccccCCCCCcEEEcccCCCccccc-hhhhccCCCCCeeecccCcccccCC-ccccCCCCCCEEeCCCCCc
Q 040540 210 -------LIPPTIFNISTMRILTLESNQLSGRLP-STIGHSLRNIEYLALSTNNLIGKIP-NSITNATKLIGLDLGFNSF 280 (669)
Q Consensus 210 -------~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~~l~~L~~L~ls~n~l~~~~p-~~~~~l~~L~~L~ls~n~l 280 (669)
..|.+++......-..+.++++. +++ ..+...+..+..=-.+.+...+.-| ..|..+++|+.|+|++|++
T Consensus 208 wla~~~a~~~ietsgarc~~p~rl~~~Ri~-q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i 286 (498)
T KOG4237|consen 208 WLADDLAMNPIETSGARCVSPYRLYYKRIN-QEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKI 286 (498)
T ss_pred hhhhHHhhchhhcccceecchHHHHHHHhc-ccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCcc
Confidence 11222223332233333333332 222 1222111111111112222333333 3588899999999999999
Q ss_pred cccCccccCCCCCCCEEEccCCccccCCCCCcccccccccCCCCCCCEEECcCCCCccccchhHhhhhccccccceEeec
Q 040540 281 SGHIPNTFGNLRHLSVLNVMMNNLTTESSSADQWSFLSSLTNCRNLSNLALASNPLGGILPQLIGNFSASLQNIYAFELG 360 (669)
Q Consensus 281 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~l~~l~~l~l~ 360 (669)
+++-+.+|.++..++.|.|..|++..... ..+.++++|++|+|.+|+++...|..+. .+..|..+.+-
T Consensus 287 ~~i~~~aFe~~a~l~eL~L~~N~l~~v~~--------~~f~~ls~L~tL~L~~N~it~~~~~aF~----~~~~l~~l~l~ 354 (498)
T KOG4237|consen 287 TRIEDGAFEGAAELQELYLTRNKLEFVSS--------GMFQGLSGLKTLSLYDNQITTVAPGAFQ----TLFSLSTLNLL 354 (498)
T ss_pred chhhhhhhcchhhhhhhhcCcchHHHHHH--------HhhhccccceeeeecCCeeEEEeccccc----ccceeeeeehc
Confidence 99999999999999999999999876532 3467889999999999999987766543 34555666655
Q ss_pred Cccc
Q 040540 361 FNDL 364 (669)
Q Consensus 361 ~n~l 364 (669)
.|.+
T Consensus 355 ~Np~ 358 (498)
T KOG4237|consen 355 SNPF 358 (498)
T ss_pred cCcc
Confidence 5543
No 382
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.80 E-value=1.5e-19 Score=188.14 Aligned_cols=200 Identities=19% Similarity=0.164 Sum_probs=134.7
Q ss_pred cCchhhhhhccccccccceecccccccc------ccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhc
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPD------FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
.+..|+.+++.++|+|++++++++.... ..++|+||+. +++.++.. ..+++.....++.++++|++|||.
T Consensus 60 ~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~ 135 (342)
T cd07879 60 RAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHS 135 (342)
T ss_pred HHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEecccc-cCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4567889999999999999998876432 3489999997 47776653 347888899999999999999995
Q ss_pred CCCCCCeeecCCCCcc----------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhC
Q 040540 522 GHSSAPIIHCEGEDSV----------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~----------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg 578 (669)
.+++|+|+++.. ......|+..|+|||++.+ ..++.++|||||||++|||++|
T Consensus 136 ----~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g 211 (342)
T cd07879 136 ----AGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTG 211 (342)
T ss_pred ----CCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhC
Confidence 479999998531 1112346788999998866 4588999999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCC---cccccc-----------ccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCC
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHR---LSEVVD-----------TNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~---~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~R 644 (669)
+.||..... .....-.....+.. ..+... +...... ...........+.+++.+||+.||++|
T Consensus 212 ~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~R 288 (342)
T cd07879 212 KTLFKGKDY--LDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKD-FSTLFPKASPQAVDLLEKMLELDVDKR 288 (342)
T ss_pred CCCCCCCCH--HHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccch-HHHHhcCCCHHHHHHHHHHcCCChhhC
Confidence 999965211 11111011100000 000000 0000000 000011234567899999999999999
Q ss_pred CCHHHHHH--HHHHhH
Q 040540 645 MHMTDAAA--KLKKIK 658 (669)
Q Consensus 645 ps~~~v~~--~l~~~~ 658 (669)
|+++|++. .+++++
T Consensus 289 ~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 289 LTATEALEHPYFDSFR 304 (342)
T ss_pred cCHHHHhcCcchhhcc
Confidence 99999985 355554
No 383
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.79 E-value=1.9e-19 Score=199.61 Aligned_cols=251 Identities=22% Similarity=0.406 Sum_probs=196.0
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccccc
Q 040540 51 QRVTALNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRL 130 (669)
Q Consensus 51 ~~v~~L~ls~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 130 (669)
.+.+.|++++++++. +|..+. ++|+.|+|++|.++ .+|..+. .+|++|++++|+++ .+|..+. .+|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 457899999999874 565443 57999999999998 5666554 58999999999998 5676553 58999999
Q ss_pred cccCccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCCC
Q 040540 131 DYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGL 210 (669)
Q Consensus 131 ~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 210 (669)
++|+++ .+|..+. ++|+.|++++|.+. .+|..+. .+|+.|++++|++++ +|..+. ++|+.|++++|.++.
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~- 318 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA- 318 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-
Confidence 999998 6777665 58999999999998 5777664 589999999999985 555443 479999999999986
Q ss_pred CCccccCCCCCcEEEcccCCCccccchhhhccCCCCCeeecccCcccccCCccccCCCCCCEEeCCCCCccccCccccCC
Q 040540 211 IPPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNTFGN 290 (669)
Q Consensus 211 ~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~ 290 (669)
+|..+. ++|+.|++++|.++ .+|..+. ++|+.|++++|++. .+|..+. ++|+.|++++|.+.. +|..+.
T Consensus 319 LP~~l~--~sL~~L~Ls~N~Lt-~LP~~l~---~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~-LP~~l~- 387 (754)
T PRK15370 319 LPETLP--PGLKTLEAGENALT-SLPASLP---PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTN-LPENLP- 387 (754)
T ss_pred CCcccc--ccceeccccCCccc-cCChhhc---CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCCC-CCHhHH-
Confidence 455443 68999999999998 4776653 68999999999987 4666553 689999999999984 555443
Q ss_pred CCCCCEEEccCCccccCCCCCcccccccccCCCCCCCEEECcCCCCc
Q 040540 291 LRHLSVLNVMMNNLTTESSSADQWSFLSSLTNCRNLSNLALASNPLG 337 (669)
Q Consensus 291 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~ 337 (669)
..|+.|++++|++...+... ......++++..+++.+|++.
T Consensus 388 -~sL~~LdLs~N~L~~LP~sl-----~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 388 -AALQIMQASRNNLVRLPESL-----PHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred -HHHHHHhhccCCcccCchhH-----HHHhhcCCCccEEEeeCCCcc
Confidence 36888999999988654321 122345577888999998876
No 384
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.79 E-value=1.1e-19 Score=209.24 Aligned_cols=170 Identities=19% Similarity=0.229 Sum_probs=122.4
Q ss_pred ccccc-cccceeccccc-------cccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 457 RNVRH-RNLIKIISSCS-------NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 457 ~~l~h-~niv~l~~~~~-------~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
+..+| +||+.++++|. .....+.++||++ ++|++++......+++.+...|+.|+++||.|||. .+|
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~----~gI 101 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHS----QGI 101 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHh----CCe
Confidence 34556 67878888762 2234567788885 69999998655678999999999999999999994 589
Q ss_pred eecCCCCccccc------------------------------------------------------------cccccccc
Q 040540 529 IHCEGEDSVTQT------------------------------------------------------------TTMATIGY 548 (669)
Q Consensus 529 ~h~d~~~~~~~~------------------------------------------------------------~~~gt~~y 548 (669)
+|||+|+..... ...||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 999999641100 02367789
Q ss_pred CccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHH
Q 040540 549 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLS 628 (669)
Q Consensus 549 ~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (669)
||||++.+..|+.++|||||||++|||++|..|+.... ..+........+ +. .......
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~~~~--------~~----------~~~~~~~ 240 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHRVLP--------PQ----------ILLNWPK 240 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHhhcC--------hh----------hhhcCHH
Confidence 99999998889999999999999999999988864311 011111111100 10 0111234
Q ss_pred HHHHHhhcccCCCCCCCCHHHHHH
Q 040540 629 IMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 629 ~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
..+++.+||+.+|.+||+|.||++
T Consensus 241 ~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 241 EASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHHHhCCCChhhCcChHHHhh
Confidence 567889999999999999999975
No 385
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.79 E-value=1.4e-19 Score=178.47 Aligned_cols=185 Identities=26% Similarity=0.279 Sum_probs=142.5
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+..|+..++.++|++++++++.+......++++||+++++|.+++..... +++.....++.++++++.|||..
T Consensus 32 ~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~---- 106 (244)
T smart00220 32 ERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGR-LSEDEARFYARQILSALEYLHSN---- 106 (244)
T ss_pred HHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHHc----
Confidence 4667889999999999999999999888889999999999999999975433 78899999999999999999954
Q ss_pred CeeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 527 PIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 527 ~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
+++|+|+++.. ......|+..|++||......++.++||||||++++|+++|+.||
T Consensus 107 ~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~ 186 (244)
T smart00220 107 GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPF 186 (244)
T ss_pred CeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 79999987320 112234788999999998888899999999999999999999998
Q ss_pred CcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 583 DEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 583 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
.... +.....++........ . . ........+.+++.+|+..+|++||++.++++
T Consensus 187 ~~~~-~~~~~~~~~~~~~~~~----~-~----------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 187 PGDD-QLLELFKKIGKPKPPF----P-P----------PEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred CCCC-cHHHHHHHHhccCCCC----c-c----------ccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 6521 1112222222111110 0 0 00003356789999999999999999999986
No 386
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.79 E-value=4.2e-19 Score=184.91 Aligned_cols=133 Identities=31% Similarity=0.406 Sum_probs=113.7
Q ss_pred cCchhhhhhccccccccceeccccccc------cccceeeccCCCCChHHhhhcC--CCccCHHHHHHHHHhHHhhhhhh
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNP------DFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGSALEYL 519 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ey~~~g~L~~~l~~~--~~~l~~~~~~~i~~~i~~~l~~l 519 (669)
....|++++++++|+|||++++.-... ....+|||||.+|+|+..+.+. ...+++.+.+.+..+++.|+.||
T Consensus 57 ~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~L 136 (732)
T KOG4250|consen 57 RWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHL 136 (732)
T ss_pred HHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHH
Confidence 455799999999999999998876543 3567999999999999999862 34689999999999999999999
Q ss_pred hcCCCCCCeeecCCCCc----------------------------ccccccccccccCccccccC-CCcCccccchhhHH
Q 040540 520 RHGHSSAPIIHCEGEDS----------------------------VTQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGV 570 (669)
Q Consensus 520 h~~~~~~~i~h~d~~~~----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv 570 (669)
|+ .+|+|||+|+. ....+.+||..|.+||++.. +.|+..+|.|||||
T Consensus 137 rE----n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~Gv 212 (732)
T KOG4250|consen 137 RE----NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGV 212 (732)
T ss_pred HH----cCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhh
Confidence 94 48999999953 12234579999999999985 78999999999999
Q ss_pred HHHHHHhCCCCCCc
Q 040540 571 LLMETFTRKRPTDE 584 (669)
Q Consensus 571 il~el~tg~~p~~~ 584 (669)
++||.+||..||..
T Consensus 213 tlY~caTG~lPF~p 226 (732)
T KOG4250|consen 213 TLYECATGELPFIP 226 (732)
T ss_pred HHHHHhccCCCCCc
Confidence 99999999999965
No 387
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.79 E-value=2e-19 Score=181.70 Aligned_cols=181 Identities=22% Similarity=0.251 Sum_probs=139.1
Q ss_pred ccCchhhhhhcccc-ccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 447 RSFDSECEVLRNVR-HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 447 ~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+.+..|..++..++ |+|++++++.+...+..+++|||+++++|.+++.+. ..+++.....++.+++.|+.|||.
T Consensus 46 ~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~~l~~Lh~---- 120 (280)
T cd05581 46 KYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKY-GSLDEKCTRFYAAEILLALEYLHS---- 120 (280)
T ss_pred HHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH----
Confidence 34566788888888 999999999998888999999999999999999864 368999999999999999999994
Q ss_pred CCeeecCCCCcc---------------------------------------------cccccccccccCccccccCCCcC
Q 040540 526 APIIHCEGEDSV---------------------------------------------TQTTTMATIGYMAPEYGSEGIVS 560 (669)
Q Consensus 526 ~~i~h~d~~~~~---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~ 560 (669)
.+++|+|+++.. ......|+..|+|||......++
T Consensus 121 ~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~ 200 (280)
T cd05581 121 KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAG 200 (280)
T ss_pred CCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCC
Confidence 479999987320 00112367899999998888899
Q ss_pred ccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCC
Q 040540 561 AKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMES 640 (669)
Q Consensus 561 ~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~ 640 (669)
.++||||+|++++|+++|+.||.... .....+.+.. . ... .+......+.+++.+||..+
T Consensus 201 ~~~Di~slG~~l~~l~~g~~p~~~~~--~~~~~~~~~~---~--~~~-------------~~~~~~~~~~~li~~~l~~~ 260 (280)
T cd05581 201 KSSDLWALGCIIYQMLTGKPPFRGSN--EYLTFQKILK---L--EYS-------------FPPNFPPDAKDLIEKLLVLD 260 (280)
T ss_pred hhhhHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHh---c--CCC-------------CCCccCHHHHHHHHHHhcCC
Confidence 99999999999999999999987532 1111111110 0 000 01122445789999999999
Q ss_pred CCCCCCH----HHHHH
Q 040540 641 PDKRMHM----TDAAA 652 (669)
Q Consensus 641 P~~Rps~----~~v~~ 652 (669)
|++||++ +++++
T Consensus 261 p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 261 PQDRLGVNEGYDELKA 276 (280)
T ss_pred HhhCCCcccCHHHHhc
Confidence 9999999 66653
No 388
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.79 E-value=2.7e-19 Score=185.79 Aligned_cols=129 Identities=21% Similarity=0.236 Sum_probs=107.5
Q ss_pred hhhhhhcccc------ccccceeccccccccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 451 SECEVLRNVR------HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 451 ~e~~~l~~l~------h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
.|+.++..++ --|+|++++++...+..+||+|... .+|+++++..+ ..++......|+.||+.||.+||.
T Consensus 231 ~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~-- 307 (586)
T KOG0667|consen 231 IEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHE-- 307 (586)
T ss_pred HHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh--
Confidence 4677777665 2489999999999999999999886 79999998643 357888888999999999999994
Q ss_pred CCCCeeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCC
Q 040540 524 SSAPIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 524 ~~~~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~ 579 (669)
.+|||||+|+.. ...+.+-+..|.|||++.+.+|+.+.|+||||||+.||+||.
T Consensus 308 --l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~ 385 (586)
T KOG0667|consen 308 --LGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGE 385 (586)
T ss_pred --CCeeeccCChhheeeccCCcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCc
Confidence 489999999641 111334578899999999999999999999999999999997
Q ss_pred CCCCc
Q 040540 580 RPTDE 584 (669)
Q Consensus 580 ~p~~~ 584 (669)
+-|.+
T Consensus 386 PLfpG 390 (586)
T KOG0667|consen 386 PLFPG 390 (586)
T ss_pred cccCC
Confidence 65544
No 389
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.78 E-value=2.3e-19 Score=186.62 Aligned_cols=197 Identities=16% Similarity=0.161 Sum_probs=132.7
Q ss_pred ccCchhhhhhccccccccceeccccccc--------------cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhH
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNP--------------DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 512 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~--------------~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i 512 (669)
+.+..|+.+++.++|+|++++++.+... ...++||||++ ++|.+++.. ..+++.....++.|+
T Consensus 47 ~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~l~~~~~~~~~~qi 123 (342)
T cd07854 47 KHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ--GPLSEEHARLFMYQL 123 (342)
T ss_pred HHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeeccc-ccHHHHHHc--CCCCHHHHHHHHHHH
Confidence 3456789999999999999998766543 34679999997 589888864 347888999999999
Q ss_pred HhhhhhhhcCCCCCCeeecCCCCccc-----------------------------ccccccccccCccccccC-CCcCcc
Q 040540 513 GSALEYLRHGHSSAPIIHCEGEDSVT-----------------------------QTTTMATIGYMAPEYGSE-GIVSAK 562 (669)
Q Consensus 513 ~~~l~~lh~~~~~~~i~h~d~~~~~~-----------------------------~~~~~gt~~y~aPE~~~~-~~~~~~ 562 (669)
+.|+.|||.. +++|+|+++... .....|+..|+|||+..+ ..++.+
T Consensus 124 ~~aL~~LH~~----givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 199 (342)
T cd07854 124 LRGLKYIHSA----NVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKA 199 (342)
T ss_pred HHHHHHHHhC----CcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCch
Confidence 9999999954 799999884310 001136778999997654 558889
Q ss_pred ccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCcc----c---ccccccc--chhhhh---hhhHHHHHHHH
Q 040540 563 CDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLS----E---VVDTNLV--REEQAF---SAKMDCLLSIM 630 (669)
Q Consensus 563 ~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~----~---~~~~~~~--~~~~~~---~~~~~~~~~~~ 630 (669)
+|||||||++|||++|+.||...... ..+...... .+.... . ....... ....+. .........+.
T Consensus 200 ~DiwSlGvil~el~~g~~pf~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (342)
T cd07854 200 IDMWAAGCIFAEMLTGKPLFAGAHEL-EQMQLILES-VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEAL 277 (342)
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHh-cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHH
Confidence 99999999999999999999653211 111111110 000000 0 0000000 000000 00112345678
Q ss_pred HHHhhcccCCCCCCCCHHHHHH
Q 040540 631 DLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 631 ~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+++.+|++.||.+|||++|+++
T Consensus 278 ~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 278 DFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHHHHHhCCCchhccCHHHHhC
Confidence 9999999999999999999975
No 390
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=7.3e-20 Score=182.42 Aligned_cols=176 Identities=18% Similarity=0.227 Sum_probs=138.9
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
....|-.+|..++.+.||+++..+.+..++|+.||-|-+|.++..+++++. ++.....-|+..+.+|++||| +++
T Consensus 466 Hv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~-Fdd~tarF~~acv~EAfeYLH----~k~ 540 (732)
T KOG0614|consen 466 HVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGS-FDDYTARFYVACVLEAFEYLH----RKG 540 (732)
T ss_pred HHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCC-cccchhhhhHHHHHHHHHHHH----hcC
Confidence 455688899999999999999999999999999999999999999997655 555555567888999999999 568
Q ss_pred eeecCCCCc------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 528 IIHCEGEDS------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 528 i~h~d~~~~------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
||.||+|+. ....+++||+.|+|||++..+.++.++|.||+||++||++||++||.
T Consensus 541 iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs 620 (732)
T KOG0614|consen 541 IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFS 620 (732)
T ss_pred ceeccCChhheeeccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCC
Confidence 999999954 23456789999999999999999999999999999999999999997
Q ss_pred cCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC
Q 040540 584 EMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH 646 (669)
Q Consensus 584 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps 646 (669)
+..+ +..+- .+-+.+ .....|......+.+++.+.+..+|.+|..
T Consensus 621 ~~dp----mktYn----------~ILkGi----d~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 621 GVDP----MKTYN----------LILKGI----DKIEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred CCch----HHHHH----------HHHhhh----hhhhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 6422 22210 000000 001112344456788999999999999975
No 391
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.78 E-value=6.2e-19 Score=183.58 Aligned_cols=197 Identities=20% Similarity=0.189 Sum_probs=133.0
Q ss_pred cCchhhhhhccccccccceeccccccc------cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhc
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNP------DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
.+..|+..+..++|+|++++++.+... ...+++++++ +++|.+++.. ..+++..+..++.++++|++|||.
T Consensus 62 ~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~ 138 (345)
T cd07877 62 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHS 138 (345)
T ss_pred HHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 455688999999999999999877532 2356778876 6899988864 348899999999999999999995
Q ss_pred CCCCCCeeecCCCCcc----------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhC
Q 040540 522 GHSSAPIIHCEGEDSV----------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~----------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg 578 (669)
.+++|+|+++.. ......|+..|+|||...+ ..++.++|||||||++|||++|
T Consensus 139 ----~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g 214 (345)
T cd07877 139 ----ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 214 (345)
T ss_pred ----CCeeecCCChHHEEEcCCCCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhC
Confidence 479999998531 0112347889999998766 4588999999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhC--CCCccccccccccc----hhhh-----h-hhhHHHHHHHHHHHhhcccCCCCCCCC
Q 040540 579 KRPTDEMFTGEMSLRRWVKESL--PHRLSEVVDTNLVR----EEQA-----F-SAKMDCLLSIMDLALDCCMESPDKRMH 646 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~----~~~~-----~-~~~~~~~~~~~~l~~~c~~~~P~~Rps 646 (669)
+.||..... ...+...++... +......+...... ..+. + .........+.+++.+|++.||.+||+
T Consensus 215 ~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t 293 (345)
T cd07877 215 RTLFPGTDH-IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT 293 (345)
T ss_pred CCCCCCCCH-HHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCC
Confidence 999864221 111111111110 00000000000000 0000 0 000123456789999999999999999
Q ss_pred HHHHHH
Q 040540 647 MTDAAA 652 (669)
Q Consensus 647 ~~~v~~ 652 (669)
+.++++
T Consensus 294 ~~e~l~ 299 (345)
T cd07877 294 AAQALA 299 (345)
T ss_pred HHHHhc
Confidence 999876
No 392
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.78 E-value=4.8e-19 Score=183.59 Aligned_cols=197 Identities=21% Similarity=0.173 Sum_probs=132.1
Q ss_pred cCchhhhhhccc-cccccceecccccc----ccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcC
Q 040540 448 SFDSECEVLRNV-RHRNLIKIISSCSN----PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHG 522 (669)
Q Consensus 448 ~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~ 522 (669)
.+..|+..+..+ .|+|++++++.+.. ....++++||+. ++|.+++.. ...+++.....++.|++.||+|||.
T Consensus 47 ~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~- 123 (332)
T cd07857 47 RALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHS- 123 (332)
T ss_pred HHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence 455688888888 59999999886532 244678888886 689999874 3468899999999999999999995
Q ss_pred CCCCCeeecCCCCccc-----------------------------ccccccccccCccccccC-CCcCccccchhhHHHH
Q 040540 523 HSSAPIIHCEGEDSVT-----------------------------QTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLL 572 (669)
Q Consensus 523 ~~~~~i~h~d~~~~~~-----------------------------~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil 572 (669)
.+++|+|+++... .....||..|+|||+..+ ..++.++||||+||++
T Consensus 124 ---~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l 200 (332)
T cd07857 124 ---ANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCIL 200 (332)
T ss_pred ---CCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHH
Confidence 4799999884310 011257889999998765 4588999999999999
Q ss_pred HHHHhCCCCCCcCCCCCccHHHHHHHhCCCC----cccccccc-------ccc-hhhhhh-hhHHHHHHHHHHHhhcccC
Q 040540 573 METFTRKRPTDEMFTGEMSLRRWVKESLPHR----LSEVVDTN-------LVR-EEQAFS-AKMDCLLSIMDLALDCCME 639 (669)
Q Consensus 573 ~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~-------~~~-~~~~~~-~~~~~~~~~~~l~~~c~~~ 639 (669)
|||++|+.||.... .......+....... ...+..+. ... ....+. ........+.+++.+|++.
T Consensus 201 ~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 278 (332)
T cd07857 201 AELLGRKPVFKGKD--YVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAF 278 (332)
T ss_pred HHHHhCCcCCCCCC--HHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccC
Confidence 99999999986522 111111111100000 00000000 000 000000 0111245688999999999
Q ss_pred CCCCCCCHHHHHH
Q 040540 640 SPDKRMHMTDAAA 652 (669)
Q Consensus 640 ~P~~Rps~~~v~~ 652 (669)
||++|||+.|+++
T Consensus 279 ~P~~R~t~~~ll~ 291 (332)
T cd07857 279 DPTKRISVEEALE 291 (332)
T ss_pred CcccCCCHHHHhc
Confidence 9999999999865
No 393
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.77 E-value=7.3e-19 Score=182.92 Aligned_cols=197 Identities=20% Similarity=0.170 Sum_probs=134.7
Q ss_pred cCchhhhhhccccccccceecccccccc------ccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhc
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPD------FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
.+..|+.++..++|+|++++++.+.... ..++||||+ +++|.+++.. ..+++.....++.++++|++|||.
T Consensus 60 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~ 136 (343)
T cd07880 60 RAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHA 136 (343)
T ss_pred HHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3557899999999999999998876543 347999999 6799988864 357899999999999999999994
Q ss_pred CCCCCCeeecCCCCcc----------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhC
Q 040540 522 GHSSAPIIHCEGEDSV----------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~----------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg 578 (669)
.+++|+|+++.. ......+++.|+|||.+.+ ..++.++||||+||++||+++|
T Consensus 137 ----~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g 212 (343)
T cd07880 137 ----AGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTG 212 (343)
T ss_pred ----CCeecCCCCHHHEEEcCCCCEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 479999998531 0112246889999998865 4588999999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCC--Cccccccc--------cccch-hhhh-hhhHHHHHHHHHHHhhcccCCCCCCCC
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPH--RLSEVVDT--------NLVRE-EQAF-SAKMDCLLSIMDLALDCCMESPDKRMH 646 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~--------~~~~~-~~~~-~~~~~~~~~~~~l~~~c~~~~P~~Rps 646 (669)
+.||...... ..+....+..... .+...+.. .+... ...+ .........+.+++.+|++.||++|||
T Consensus 213 ~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t 291 (343)
T cd07880 213 KPLFKGHDHL-DQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRIT 291 (343)
T ss_pred CCCCCCCCHH-HHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCC
Confidence 9998653210 1111111110000 00000000 00000 0000 001233456789999999999999999
Q ss_pred HHHHHH
Q 040540 647 MTDAAA 652 (669)
Q Consensus 647 ~~~v~~ 652 (669)
+.+++.
T Consensus 292 ~~~~l~ 297 (343)
T cd07880 292 AAEALA 297 (343)
T ss_pred HHHHhc
Confidence 999984
No 394
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.77 E-value=2.3e-19 Score=176.76 Aligned_cols=179 Identities=21% Similarity=0.246 Sum_probs=139.9
Q ss_pred chhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCC-ccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 450 DSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 450 ~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
..|-.++.++..+.||.+-.++...+..++|+..|.||+|.-.|++.+. .+++....-++.+|+.||++||. .+|
T Consensus 233 LnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~----~~i 308 (591)
T KOG0986|consen 233 LNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHR----RRI 308 (591)
T ss_pred hHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHh----cce
Confidence 3577789999999999998888889999999999999999999987543 47888888899999999999994 489
Q ss_pred eecCCCCc------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCc
Q 040540 529 IHCEGEDS------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE 584 (669)
Q Consensus 529 ~h~d~~~~------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 584 (669)
+-||+|+. ...+..+||.+|||||++....|+..+|+||+||++|||+.|+.||..
T Consensus 309 VYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 309 VYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred eeccCChhheeeccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence 99999853 123344799999999999999999999999999999999999999864
Q ss_pred CCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHH
Q 040540 585 MFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMT 648 (669)
Q Consensus 585 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~ 648 (669)
...... .+-+|..+..+.. ..++..++++.+++...+.+||.+|...+
T Consensus 389 ~KeKvk--------------~eEvdrr~~~~~~--ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 389 RKEKVK--------------REEVDRRTLEDPE--EYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred hhhhhh--------------HHHHHHHHhcchh--hcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 321110 0112222222111 12355667788999999999999998654
No 395
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.76 E-value=2.9e-20 Score=171.00 Aligned_cols=180 Identities=21% Similarity=0.206 Sum_probs=130.4
Q ss_pred hccccccccceeccccccccccceeeccCCCCChHHhhhc----CCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeec
Q 040540 456 LRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS----HNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHC 531 (669)
Q Consensus 456 l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~----~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~ 531 (669)
++.-..|+||+++|++...+..||.||.|+ .++..+.+. ....+++.-..+|.....+||.||... ..||||
T Consensus 117 mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~---lkiIHR 192 (361)
T KOG1006|consen 117 MKSSNCPNIVKFYGALFSEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE---LKIIHR 192 (361)
T ss_pred HhhcCCcHHHHHhhhhhcCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH---hhhhhc
Confidence 344468999999999999999999999996 677665432 234567777778888899999999754 579999
Q ss_pred CCCCc------------------------ccccccccccccCccccccC--CCcCccccchhhHHHHHHHHhCCCCCCcC
Q 040540 532 EGEDS------------------------VTQTTTMATIGYMAPEYGSE--GIVSAKCDVYSYGVLLMETFTRKRPTDEM 585 (669)
Q Consensus 532 d~~~~------------------------~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 585 (669)
|+|++ ...+...|-..|||||-+.. ..|+.++||||+||+|+|++||+.||...
T Consensus 193 DvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w 272 (361)
T KOG1006|consen 193 DVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW 272 (361)
T ss_pred cCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH
Confidence 99975 12333458889999998865 34899999999999999999999998763
Q ss_pred CCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 586 FTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 586 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
..-..++.+.+...+ + .+.... ...+....+..++.-|+.+|-+.||+..++.+
T Consensus 273 ~svfeql~~Vv~gdp-p--------~l~~~~----~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 273 DSVFEQLCQVVIGDP-P--------ILLFDK----ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred HHHHHHHHHHHcCCC-C--------eecCcc----cccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 221112222222111 1 111100 01235567889999999999999999998865
No 396
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=8.5e-19 Score=170.54 Aligned_cols=162 Identities=22% Similarity=0.237 Sum_probs=126.0
Q ss_pred cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCc---
Q 040540 460 RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS--- 536 (669)
Q Consensus 460 ~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~--- 536 (669)
+.|.++.+..+++..+..|.||||+.+|+|--.++.-+. .-+..+.-++.+||-||-||| +.+||.||+|-.
T Consensus 408 kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh----~kgIiYRDLKLDNvm 482 (683)
T KOG0696|consen 408 KPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLH----SKGIIYRDLKLDNVM 482 (683)
T ss_pred CCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhh----cCCeeeeeccccceE
Confidence 578888999999999999999999999999888875433 455677778999999999999 458999998821
Q ss_pred ----------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHH
Q 040540 537 ----------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRR 594 (669)
Q Consensus 537 ----------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~ 594 (669)
....+.+||+.|+|||++....|+..+|+|||||+||||+.|++||++. ++..+.+
T Consensus 483 Ld~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe--DE~elF~ 560 (683)
T KOG0696|consen 483 LDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE--DEDELFQ 560 (683)
T ss_pred eccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC--CHHHHHH
Confidence 2344568999999999999999999999999999999999999999873 2222322
Q ss_pred HHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC
Q 040540 595 WVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH 646 (669)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps 646 (669)
.+ ++..+ .++...+.++..++..-+.+.|.+|..
T Consensus 561 aI-----------~ehnv-------syPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 561 AI-----------MEHNV-------SYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred HH-----------HHccC-------cCcccccHHHHHHHHHHhhcCCccccC
Confidence 22 11111 123344556778888889999999963
No 397
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.75 E-value=4.6e-19 Score=167.38 Aligned_cols=170 Identities=23% Similarity=0.210 Sum_probs=130.4
Q ss_pred hhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeee
Q 040540 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH 530 (669)
Q Consensus 451 ~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h 530 (669)
.|..++...+||.+..+-..++..+..+.||||..+|.|+-.|.+.+ .+++....-+-..|..||.|||+ ..|+.
T Consensus 217 TE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer-~FsE~RtRFYGaEIvsAL~YLHs----~~ivY 291 (516)
T KOG0690|consen 217 TENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRER-VFSEDRTRFYGAEIVSALGYLHS----RNIVY 291 (516)
T ss_pred hHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhh-cccchhhhhhhHHHHHHhhhhhh----CCeee
Confidence 46778889999999999888999999999999999999999887543 35555555577889999999995 47999
Q ss_pred cCCCC-------------------------cccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcC
Q 040540 531 CEGED-------------------------SVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 585 (669)
Q Consensus 531 ~d~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 585 (669)
||+|- .....+++|||.|.|||++.+..|+.++|+|..||++|||+.|+.||...
T Consensus 292 RDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 292 RDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK 371 (516)
T ss_pred eechhhhheeccCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc
Confidence 99871 12345678999999999999999999999999999999999999999763
Q ss_pred CCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCC
Q 040540 586 FTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRM 645 (669)
Q Consensus 586 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rp 645 (669)
. ...+.+.+- .+..++ +....+++..+....+.+||.+|.
T Consensus 372 d--h~kLFeLIl----------------~ed~kF--Pr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 372 D--HEKLFELIL----------------MEDLKF--PRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred c--hhHHHHHHH----------------hhhccC--CccCCHHHHHHHHHHhhcChHhhc
Confidence 2 222221110 000111 223344567788889999999996
No 398
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.75 E-value=2e-20 Score=160.83 Aligned_cols=164 Identities=29% Similarity=0.515 Sum_probs=109.9
Q ss_pred ccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccccccccCccccCCcccCCCCCCC
Q 040540 71 FGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLE 150 (669)
Q Consensus 71 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 150 (669)
+.++++++.|-||+|.++ .+|..+..+.+|+.|++++|++. .+|.+++++++|+.|+++-|++. .+|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 556666777777777776 45555677777777777777776 56667777777777777777765 5677777777777
Q ss_pred eeecccccccc-cCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEcccC
Q 040540 151 MLRAEFNIIGG-TIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGLIPPTIFNISTMRILTLESN 229 (669)
Q Consensus 151 ~L~l~~n~l~~-~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n 229 (669)
+||+.+|+++. .+|..|..|+.|+.|+++.|.+. .+|..++++++|+.|.+..|.+- .+|.+++.++.|+.|.+++|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 77777766653 45666666666666677777664 56666677777777777776665 35666666666666666666
Q ss_pred CCccccchhhh
Q 040540 230 QLSGRLPSTIG 240 (669)
Q Consensus 230 ~l~~~~p~~~~ 240 (669)
+++ .+|+.++
T Consensus 184 rl~-vlppel~ 193 (264)
T KOG0617|consen 184 RLT-VLPPELA 193 (264)
T ss_pred eee-ecChhhh
Confidence 665 4555443
No 399
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.74 E-value=1.7e-18 Score=194.29 Aligned_cols=82 Identities=21% Similarity=0.298 Sum_probs=71.4
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|+|++++++.+......++||||+++++|.+++... ..+++.....|+.+++.||+|||. .+
T Consensus 50 ~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH~----~g 124 (669)
T cd05610 50 QVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLHR----HG 124 (669)
T ss_pred HHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh----CC
Confidence 4567888889999999999999988888999999999999999999753 357888889999999999999994 37
Q ss_pred eeecCCC
Q 040540 528 IIHCEGE 534 (669)
Q Consensus 528 i~h~d~~ 534 (669)
|+|||+|
T Consensus 125 IiHrDLK 131 (669)
T cd05610 125 IIHRDLK 131 (669)
T ss_pred EEeCCcc
Confidence 8888765
No 400
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=1.2e-18 Score=189.55 Aligned_cols=182 Identities=19% Similarity=0.277 Sum_probs=136.8
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.|+.|-.+|.....+=|+.+..++++..+.|+|||||+||+|-.++.+.. .++..-..-++..+.-||+-+|. .+
T Consensus 121 ~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~----mg 195 (1317)
T KOG0612|consen 121 CFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHS----MG 195 (1317)
T ss_pred HHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHh----cc
Confidence 46778888888888889999999999999999999999999999998765 56766666677889999999995 48
Q ss_pred eeecCCCCc--------------------------ccccccccccccCcccccc----C-CCcCccccchhhHHHHHHHH
Q 040540 528 IIHCEGEDS--------------------------VTQTTTMATIGYMAPEYGS----E-GIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 528 i~h~d~~~~--------------------------~~~~~~~gt~~y~aPE~~~----~-~~~~~~~Dv~s~Gvil~el~ 576 (669)
.||||+|+. ......+|||-|.+||++. + +.|+..+|+||+||++|||+
T Consensus 196 yVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMl 275 (1317)
T KOG0612|consen 196 YVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEML 275 (1317)
T ss_pred ceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHH
Confidence 999999964 1123457999999999874 3 56999999999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC---HHHHH
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH---MTDAA 651 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps---~~~v~ 651 (669)
.|..||.+.. ++. ..+++++. .+...||...+.+..+.++|.+.+. +|+.|.. ++|+.
T Consensus 276 yG~TPFYads-----lve--------TY~KIm~h---k~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 276 YGETPFYADS-----LVE--------TYGKIMNH---KESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIK 336 (1317)
T ss_pred cCCCcchHHH-----HHH--------HHHHHhch---hhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHH
Confidence 9999996521 111 12223322 1112233334566778888887664 6677776 66664
No 401
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=1.9e-18 Score=169.46 Aligned_cols=186 Identities=23% Similarity=0.315 Sum_probs=137.6
Q ss_pred chhhhhhccccccccceeccccccc-cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 450 DSECEVLRNVRHRNLIKIISSCSNP-DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 450 ~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
.+|..+-..+.||-||++++++..+ +..+-|+|||++.+|.-+|+.+ ..+++.++..|+.+|+.||.||... .+||
T Consensus 515 cREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEi--kpPI 591 (775)
T KOG1151|consen 515 CREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEI--KPPI 591 (775)
T ss_pred HHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhcc--CCCe
Confidence 4567788889999999999998764 4568999999999999999865 4588899999999999999999765 8999
Q ss_pred eecCCCCc----------------------------------cccc-ccccccccCccccccC----CCcCccccchhhH
Q 040540 529 IHCEGEDS----------------------------------VTQT-TTMATIGYMAPEYGSE----GIVSAKCDVYSYG 569 (669)
Q Consensus 529 ~h~d~~~~----------------------------------~~~~-~~~gt~~y~aPE~~~~----~~~~~~~Dv~s~G 569 (669)
||.|+|+. ...+ ...||.+|.+||.+.- .+.+.|+||||.|
T Consensus 592 IHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvG 671 (775)
T KOG1151|consen 592 IHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVG 671 (775)
T ss_pred eeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeee
Confidence 99999843 0111 2358999999997753 3478899999999
Q ss_pred HHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHH
Q 040540 570 VLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTD 649 (669)
Q Consensus 570 vil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~ 649 (669)
||.|..+.|+.||........ +.+ .. ..+....-.||..+....++..+|.+|++..-++|-...+
T Consensus 672 VIFyQClYGrKPFGhnqsQQd-ILq---eN----------TIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~q 737 (775)
T KOG1151|consen 672 VIFYQCLYGRKPFGHNQSQQD-ILQ---EN----------TILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQ 737 (775)
T ss_pred hhhhhhhccCCCCCCchhHHH-HHh---hh----------chhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHH
Confidence 999999999999976322211 111 00 0111111123333445567789999999988888877666
Q ss_pred HHH
Q 040540 650 AAA 652 (669)
Q Consensus 650 v~~ 652 (669)
++.
T Consensus 738 LA~ 740 (775)
T KOG1151|consen 738 LAC 740 (775)
T ss_pred Hcc
Confidence 543
No 402
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.74 E-value=9.4e-19 Score=180.22 Aligned_cols=187 Identities=20% Similarity=0.263 Sum_probs=142.9
Q ss_pred cccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 446 FRSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 446 ~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
+...+.|+-+++.++|+||+.++|.+..++..+++||||.+|+|.+..+. -.++.+.+..-+.+...+|++|||.
T Consensus 56 ~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~~-TgplselqiayvcRetl~gl~ylhs---- 130 (829)
T KOG0576|consen 56 FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLKYLHS---- 130 (829)
T ss_pred ccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeee-cccchhHHHHHHHhhhhccchhhhc----
Confidence 34566789999999999999999999999999999999999999998874 3568888888888999999999994
Q ss_pred CCeeecCCCCc-------------------------ccccccccccccCcccccc---CCCcCccccchhhHHHHHHHHh
Q 040540 526 APIIHCEGEDS-------------------------VTQTTTMATIGYMAPEYGS---EGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 526 ~~i~h~d~~~~-------------------------~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~t 577 (669)
.+-+|||+|.. .+..+++||+.|||||+.. .+.|..++|||+.|++..|+..
T Consensus 131 ~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~e 210 (829)
T KOG0576|consen 131 QGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGE 210 (829)
T ss_pred CCcccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhh
Confidence 46799999832 2345568999999999863 4569999999999999999988
Q ss_pred CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 578 RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
-++|..+..... .+.-..++.++ +.... .+......+.+++..|+.++|.+||+++..++
T Consensus 211 Lqpplfdlhpmr-~l~LmTkS~~q--------pp~lk------Dk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 211 LQPPLFDLHPMR-ALFLMTKSGFQ--------PPTLK------DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred cCCcccccchHH-HHHHhhccCCC--------CCccc------CCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 888865422111 01111111111 11111 13445667889999999999999999987665
No 403
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.73 E-value=4.5e-20 Score=158.68 Aligned_cols=163 Identities=31% Similarity=0.573 Sum_probs=149.3
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccccc
Q 040540 51 QRVTALNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRL 130 (669)
Q Consensus 51 ~~v~~L~ls~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 130 (669)
..++.|.||+|.++ .+|+.++.+.+|++|++++|++. .+|..++.+++|+.|+++-|++. .+|..|+.++-|++|||
T Consensus 33 s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldl 109 (264)
T KOG0617|consen 33 SNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDL 109 (264)
T ss_pred hhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhc
Confidence 46899999999997 67778999999999999999998 78889999999999999999997 78999999999999999
Q ss_pred cccCccc-cCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCC
Q 040540 131 DYNNFTG-PIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSG 209 (669)
Q Consensus 131 ~~n~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 209 (669)
++|++.. .+|+.|+.|+-|+.|+++.|.+. .+|..+++|++|+.|.+..|.+. .+|..++.++.|+.|.+.+|+++.
T Consensus 110 tynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~v 187 (264)
T KOG0617|consen 110 TYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLTV 187 (264)
T ss_pred cccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceeee
Confidence 9999874 68999999999999999999986 78999999999999999999997 789999999999999999999995
Q ss_pred CCCccccCCC
Q 040540 210 LIPPTIFNIS 219 (669)
Q Consensus 210 ~~p~~~~~l~ 219 (669)
+|++++++.
T Consensus 188 -lppel~~l~ 196 (264)
T KOG0617|consen 188 -LPPELANLD 196 (264)
T ss_pred -cChhhhhhh
Confidence 566666553
No 404
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.73 E-value=2.9e-18 Score=152.20 Aligned_cols=140 Identities=24% Similarity=0.235 Sum_probs=112.9
Q ss_pred hccccccccceeccccccccccceeeccCCCCChHHhhhc---CCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecC
Q 040540 456 LRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCE 532 (669)
Q Consensus 456 l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d 532 (669)
++...+|..|.++|.......++|.||.|+ .+|..+-++ .+..+++.-.-+|+..|.+|+.|||.. ..+||||
T Consensus 99 ~r~~~CPf~V~FyGa~~regdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k---L~vIHRD 174 (282)
T KOG0984|consen 99 MRTVDCPFTVHFYGALFREGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK---LSVIHRD 174 (282)
T ss_pred ccCCCCCeEEEeehhhhccccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH---hhhhhcc
Confidence 445679999999999999999999999997 688777653 567788888999999999999999954 6799999
Q ss_pred CCCcc------------------------cccccccccccCccccccC----CCcCccccchhhHHHHHHHHhCCCCCCc
Q 040540 533 GEDSV------------------------TQTTTMATIGYMAPEYGSE----GIVSAKCDVYSYGVLLMETFTRKRPTDE 584 (669)
Q Consensus 533 ~~~~~------------------------~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 584 (669)
+|++. ..+...|--.|||||.+.. ..|+.|+||||+|++++||++++.||+.
T Consensus 175 vKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 175 VKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred CCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 99751 1122346778999998753 4699999999999999999999999988
Q ss_pred CCCCCccHHHHHHHh
Q 040540 585 MFTGEMSLRRWVKES 599 (669)
Q Consensus 585 ~~~~~~~l~~~~~~~ 599 (669)
.......+.+.|.+.
T Consensus 255 w~tpF~qLkqvVeep 269 (282)
T KOG0984|consen 255 WGTPFQQLKQVVEEP 269 (282)
T ss_pred cCCHHHHHHHHhcCC
Confidence 665555566655544
No 405
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=2.6e-19 Score=184.61 Aligned_cols=177 Identities=23% Similarity=0.248 Sum_probs=93.9
Q ss_pred EEcCCCCCc-ccccccccCCCCCCEEeCCCCcCccc----CCcccCCCCCCCEEEccCCcCCc------cCCccccCCcc
Q 040540 56 LNLSDMGLG-GTIPLHFGNLSFLVSLDISENNFHGH----LPKELGQLRRLRVMSLAYNKLSG------SFPSWIGVLSK 124 (669)
Q Consensus 56 L~ls~~~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~n~l~~------~~p~~~~~l~~ 124 (669)
|+|+.+.++ +.....+..+.+|++|+++++.++.. ++..+...+.|+.|+++++.+.+ .++..+..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 555555555 22333455566677777777766432 34445566667777777766652 22344555667
Q ss_pred cccccccccCccccCCcccCCCCC---CCeeecccccccc----cCCcccCCC-CCCCEEEcccCCCccc----CCcccc
Q 040540 125 LRILRLDYNNFTGPIPNSLFNLSR---LEMLRAEFNIIGG----TIPSRIGNL-RKLVNLGLWSCNLQGQ----IPTEIG 192 (669)
Q Consensus 125 L~~L~L~~n~l~~~~p~~~~~l~~---L~~L~l~~n~l~~----~~p~~~~~L-~~L~~L~l~~n~l~~~----~p~~~~ 192 (669)
|+.|++++|.+.+..+..+..+.+ |+.|++++|.+++ .+...+..+ ++|+.|++++|.+++. ++..+.
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 162 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALR 162 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHH
Confidence 777777777666444444444333 6666666665542 222233444 5566666666665522 223344
Q ss_pred CCCCCCEEEccCCCCCCC----CCccccCCCCCcEEEcccCCCc
Q 040540 193 SLQNLKNLDLADNKLSGL----IPPTIFNISTMRILTLESNQLS 232 (669)
Q Consensus 193 ~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~n~l~ 232 (669)
.+++|++|++++|.+++. ++..+...++|+.|++++|.++
T Consensus 163 ~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 206 (319)
T cd00116 163 ANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLT 206 (319)
T ss_pred hCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccC
Confidence 445566666666655531 1222333345555555555543
No 406
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.72 E-value=9.4e-18 Score=162.71 Aligned_cols=196 Identities=18% Similarity=0.215 Sum_probs=134.3
Q ss_pred hhhhhccccc------cccceeccccccccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcCCC
Q 040540 452 ECEVLRNVRH------RNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHGHS 524 (669)
Q Consensus 452 e~~~l~~l~h------~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~ 524 (669)
|+.++.++.+ .-++.+.+++.-.+..+||+|.+ +.|+++++.+.+ .+.+......++.|+.++++|||+
T Consensus 135 Ei~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~--- 210 (415)
T KOG0671|consen 135 EIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHD--- 210 (415)
T ss_pred HHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHh---
Confidence 5666666621 13455566677788889999987 469999998743 467888889999999999999994
Q ss_pred CCCeeecCCCCc------------------------------------------ccccccccccccCccccccCCCcCcc
Q 040540 525 SAPIIHCEGEDS------------------------------------------VTQTTTMATIGYMAPEYGSEGIVSAK 562 (669)
Q Consensus 525 ~~~i~h~d~~~~------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~ 562 (669)
.+++|-|+|+. ....+.+.|..|.|||++.+-..+.+
T Consensus 211 -~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~p 289 (415)
T KOG0671|consen 211 -LKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQP 289 (415)
T ss_pred -cceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCc
Confidence 48999998843 01122357889999999999999999
Q ss_pred ccchhhHHHHHHHHhCCCCCCcCC-CCCccHHHHHHHhCCCCccc-----------ccc----------ccccchh----
Q 040540 563 CDVYSYGVLLMETFTRKRPTDEMF-TGEMSLRRWVKESLPHRLSE-----------VVD----------TNLVREE---- 616 (669)
Q Consensus 563 ~Dv~s~Gvil~el~tg~~p~~~~~-~~~~~l~~~~~~~~~~~~~~-----------~~~----------~~~~~~~---- 616 (669)
+||||+||||+|+.||..-|..-. .+...+.+.+-..+|..... .+| ......+
T Consensus 290 CDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~ 369 (415)
T KOG0671|consen 290 CDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLK 369 (415)
T ss_pred cCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHH
Confidence 999999999999999998775311 12122222222222221100 000 0000000
Q ss_pred hhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 617 QAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 617 ~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
.-+...+.+-..+.|++.+++..||.+|+|++|+++
T Consensus 370 ~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 370 KYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 111223456667999999999999999999999875
No 407
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.71 E-value=1.3e-17 Score=158.19 Aligned_cols=129 Identities=22% Similarity=0.224 Sum_probs=108.6
Q ss_pred hhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeee
Q 040540 452 ECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH 530 (669)
Q Consensus 452 e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h 530 (669)
|-.+.... .||.+|.+..+++.....+.|.||+++|+|--.+.+ ...+++..+.-+...|.-||.|||. ++||.
T Consensus 300 ek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqr-qrklpeeharfys~ei~lal~flh~----rgiiy 374 (593)
T KOG0695|consen 300 EKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEICLALNFLHE----RGIIY 374 (593)
T ss_pred hHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhh-hhcCcHHHhhhhhHHHHHHHHHHhh----cCeee
Confidence 33344433 699999999999999999999999999999877764 4458888887888899999999994 58999
Q ss_pred cCCCC-------------------------cccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcC
Q 040540 531 CEGED-------------------------SVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 585 (669)
Q Consensus 531 ~d~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 585 (669)
||+|- .....+++||+.|.|||++.+..|+..+|+|++||+++||+.|+.||+-.
T Consensus 375 rdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdiv 454 (593)
T KOG0695|consen 375 RDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV 454 (593)
T ss_pred eeccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence 99871 12345668999999999999999999999999999999999999999753
No 408
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.70 E-value=1.2e-17 Score=158.18 Aligned_cols=192 Identities=22% Similarity=0.228 Sum_probs=136.3
Q ss_pred ccCchhhhhhccccccccceeccccccc------cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhh
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNP------DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLR 520 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh 520 (669)
+.-.+|...+..+.|+|+++++.++... ...|+|||||+ ++|.+.+.- .++-.....|..|+..|++|+|
T Consensus 60 kra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~~---elDH~tis~i~yq~~~~ik~lh 135 (369)
T KOG0665|consen 60 KRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVILM---ELDHETISYILYQMLCGIKHLH 135 (369)
T ss_pred hhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHHH---hcchHHHHHHHHHHHHHHHHHH
Confidence 3445788899999999999999887543 35689999997 799998873 2566677789999999999999
Q ss_pred cCCCCCCeeecCCCCcc------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHH
Q 040540 521 HGHSSAPIIHCEGEDSV------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETF 576 (669)
Q Consensus 521 ~~~~~~~i~h~d~~~~~------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~ 576 (669)
+.+|+|||+|++. ..+..+.|..|.|||++.+..|.+.+||||.||++.||+
T Consensus 136 ----s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli 211 (369)
T KOG0665|consen 136 ----SAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELI 211 (369)
T ss_pred ----hcceeecccCcccceecchhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHh
Confidence 4589999999651 122335788999999999988999999999999999999
Q ss_pred hCCCCCCcCCCCCccHHHHHHH------------------------hCCC----CccccccccccchhhhhhhhHHHHHH
Q 040540 577 TRKRPTDEMFTGEMSLRRWVKE------------------------SLPH----RLSEVVDTNLVREEQAFSAKMDCLLS 628 (669)
Q Consensus 577 tg~~p~~~~~~~~~~l~~~~~~------------------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (669)
+|+.-|.+ ...+-+|.+. ..++ ...+.+...+.... .....-....
T Consensus 212 ~~~Vlf~g----~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~--~e~~~~~~~~ 285 (369)
T KOG0665|consen 212 LGTVLFPG----KDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVV--LEGSKLDCSL 285 (369)
T ss_pred hceEEecC----chHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCccccccc--ccCCccchHH
Confidence 99987643 2223333211 0010 01111111110000 0001123345
Q ss_pred HHHHHhhcccCCCCCCCCHHHHHH
Q 040540 629 IMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 629 ~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+.+++.+++..+|++|-+++++++
T Consensus 286 ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 286 ARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHHHHHhhccChhhcccHHHHhc
Confidence 678999999999999999999875
No 409
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.70 E-value=1.2e-18 Score=179.64 Aligned_cols=202 Identities=22% Similarity=0.259 Sum_probs=121.9
Q ss_pred EEeCCCCcCc-ccCCcccCCCCCCCEEEccCCcCCc----cCCccccCCcccccccccccCccc------cCCcccCCCC
Q 040540 79 SLDISENNFH-GHLPKELGQLRRLRVMSLAYNKLSG----SFPSWIGVLSKLRILRLDYNNFTG------PIPNSLFNLS 147 (669)
Q Consensus 79 ~L~Ls~N~l~-~~~p~~l~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~------~~p~~~~~l~ 147 (669)
.|+|..+.++ ...+..+..+..|+.|+++++.++. .++..+...++|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 5778888876 3445556777889999999998853 245566777788899988887762 2334456677
Q ss_pred CCCeeecccccccccCCcccCCCCC---CCEEEcccCCCcc----cCCccccCC-CCCCEEEccCCCCCCC----CCccc
Q 040540 148 RLEMLRAEFNIIGGTIPSRIGNLRK---LVNLGLWSCNLQG----QIPTEIGSL-QNLKNLDLADNKLSGL----IPPTI 215 (669)
Q Consensus 148 ~L~~L~l~~n~l~~~~p~~~~~L~~---L~~L~l~~n~l~~----~~p~~~~~l-~~L~~L~l~~N~l~~~----~p~~~ 215 (669)
+|+.|++++|.+.+..+..+..+.+ |++|++++|++.+ .+...+..+ ++|+.|++++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 7777777777776555555544444 7777777777652 223334455 6677777777776632 22334
Q ss_pred cCCCCCcEEEcccCCCcccc----chhhhccCCCCCeeecccCccccc----CCccccCCCCCCEEeCCCCCcc
Q 040540 216 FNISTMRILTLESNQLSGRL----PSTIGHSLRNIEYLALSTNNLIGK----IPNSITNATKLIGLDLGFNSFS 281 (669)
Q Consensus 216 ~~l~~L~~L~l~~n~l~~~~----p~~~~~~l~~L~~L~ls~n~l~~~----~p~~~~~l~~L~~L~ls~n~l~ 281 (669)
..+.+|++|++++|.+++.. +..+. ..++|++|++++|.+.+. +...+..+++|+.|++++|.+.
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~-~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~ 234 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLK-ANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLT 234 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHH-hCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCc
Confidence 45556666666666665321 11121 234666666666655422 1223344555666666665554
No 410
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.69 E-value=4.9e-18 Score=179.62 Aligned_cols=178 Identities=21% Similarity=0.288 Sum_probs=130.2
Q ss_pred hhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCC---ccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 451 SECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNY---FLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 451 ~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+|+..+... .|||+|+++|....+++.||+.|.|.+ +|.+++..... .........+..|++.|+++||. -
T Consensus 551 rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs----l 625 (903)
T KOG1027|consen 551 REIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS----L 625 (903)
T ss_pred HHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh----c
Confidence 466666555 599999999999999999999999974 99999986311 11114456788999999999994 5
Q ss_pred CeeecCCCCcc---------------------------------cccccccccccCccccccCCCcCccccchhhHHHHH
Q 040540 527 PIIHCEGEDSV---------------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLM 573 (669)
Q Consensus 527 ~i~h~d~~~~~---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ 573 (669)
+|+|||+|+.. ...+..||.+|+|||++....-+.++|++|+|||+|
T Consensus 626 ~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfy 705 (903)
T KOG1027|consen 626 KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFY 705 (903)
T ss_pred ccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEE
Confidence 89999999530 012234899999999998887788999999999999
Q ss_pred HHHhC-CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 574 ETFTR-KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 574 el~tg-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
.++|| +.||.+....+..+.. .... +. .+. ...++ .+.++|.+++..+|..||++.+|+.
T Consensus 706 YvltgG~HpFGd~~~R~~NIl~--------~~~~-L~-~L~-------~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 706 YVLTGGSHPFGDSLERQANILT--------GNYT-LV-HLE-------PLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred EEecCCccCCCchHHhhhhhhc--------Cccc-ee-eec-------cCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 99997 8899763322111110 0000 00 000 11222 6789999999999999999999975
No 411
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.69 E-value=8.3e-17 Score=176.15 Aligned_cols=169 Identities=19% Similarity=0.170 Sum_probs=106.7
Q ss_pred ccccccceeeccCCCCChHHhhhcCCCcc-------------------CHHHHHHHHHhHHhhhhhhhcCCCCCCeeecC
Q 040540 472 SNPDFKALVLEFMPNGSLEKWLYSHNYFL-------------------DILERLNIMIDVGSALEYLRHGHSSAPIIHCE 532 (669)
Q Consensus 472 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~l-------------------~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d 532 (669)
......++||||+++++|.+++....... .......|+.|+++||+|||. .+|+|||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~----~gIiHRD 280 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS----TGIVHRD 280 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH----CCEEeCc
Confidence 34567789999999999999997532211 112244689999999999994 4899999
Q ss_pred CCCcc---------------------------cccccccccccCccccccCC----------------------CcCccc
Q 040540 533 GEDSV---------------------------TQTTTMATIGYMAPEYGSEG----------------------IVSAKC 563 (669)
Q Consensus 533 ~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~ 563 (669)
+|+.. ......||+.|||||.+... .+..++
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 99531 01123578899999965321 234567
Q ss_pred cchhhHHHHHHHHhCCCCCCcCC--------CCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhh
Q 040540 564 DVYSYGVLLMETFTRKRPTDEMF--------TGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALD 635 (669)
Q Consensus 564 Dv~s~Gvil~el~tg~~p~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 635 (669)
|||||||++|||+++..|++... ........|.....+. . .+.+.. .+...+.......+++.+
T Consensus 361 DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~----~~~~~~---~~~~~d~~~~~~~dLi~~ 432 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR-A----SPDLRR---GFEVLDLDGGAGWELLKS 432 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc-c----chhhhh---hhhhccccchHHHHHHHH
Confidence 99999999999999877654310 0011122232211110 0 000000 000011112245689999
Q ss_pred cccCCCCCCCCHHHHHH
Q 040540 636 CCMESPDKRMHMTDAAA 652 (669)
Q Consensus 636 c~~~~P~~Rps~~~v~~ 652 (669)
|++.||.+|||+.|+++
T Consensus 433 mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 433 MMRFKGRQRISAKAALA 449 (566)
T ss_pred HccCCcccCCCHHHHhC
Confidence 99999999999999987
No 412
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.68 E-value=7.2e-18 Score=168.80 Aligned_cols=183 Identities=19% Similarity=0.215 Sum_probs=141.8
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
...+|+.++.+++||.||.+...|..++.+++|||-+.+.-|.-.|..+...+++....-.+.||..||.|||+. +
T Consensus 609 qlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k----n 684 (888)
T KOG4236|consen 609 QLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK----N 684 (888)
T ss_pred HHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc----c
Confidence 456799999999999999999999999999999999975444444444556677776667778999999999975 8
Q ss_pred eeecCCCCc---------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCC
Q 040540 528 IIHCEGEDS---------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 528 i~h~d~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
|+|||+|+. ....+.+||+.|.|||++..+.|...-|+||.|||+|--++|..
T Consensus 685 IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTF 764 (888)
T KOG4236|consen 685 IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTF 764 (888)
T ss_pred eeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccc
Confidence 999999954 12334469999999999999999999999999999999999999
Q ss_pred CCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 581 PTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 581 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
||.+. ++..+..+-+. .+.| ...|.+....++|+|...++..=.+|.|....+.
T Consensus 765 PFNEd-EdIndQIQNAa---------FMyP--------p~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 765 PFNED-EDINDQIQNAA---------FMYP--------PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred cCCCc-cchhHHhhccc---------cccC--------CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 99752 11111111111 1111 1236777888899999999999999999877654
No 413
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.67 E-value=4.3e-17 Score=178.94 Aligned_cols=158 Identities=19% Similarity=0.206 Sum_probs=108.7
Q ss_pred cccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCc----------------
Q 040540 473 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS---------------- 536 (669)
Q Consensus 473 ~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~---------------- 536 (669)
.+...||=||||+...+.+++++....-......+++++|+.|++|+|.. ++||||+|+.
T Consensus 667 ~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~----giIHRDLKP~NIFLd~~~~VKIGDFG 742 (1351)
T KOG1035|consen 667 KPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ----GIIHRDLKPRNIFLDSRNSVKIGDFG 742 (1351)
T ss_pred cceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC----ceeeccCCcceeEEcCCCCeeecccc
Confidence 34567888999999888888875433223455668999999999999954 6999999942
Q ss_pred ---------------------------ccccccccccccCccccccCC---CcCccccchhhHHHHHHHHhCCCCCCcCC
Q 040540 537 ---------------------------VTQTTTMATIGYMAPEYGSEG---IVSAKCDVYSYGVLLMETFTRKRPTDEMF 586 (669)
Q Consensus 537 ---------------------------~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~s~Gvil~el~tg~~p~~~~~ 586 (669)
...++.+||.-|+|||...+. +|+.|+|+||+|||++||+. ||....
T Consensus 743 LAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM 819 (1351)
T KOG1035|consen 743 LATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSM 819 (1351)
T ss_pred cchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchH
Confidence 134556899999999998764 49999999999999999975 444311
Q ss_pred CCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 587 TGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 587 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+......-.+ +..+..+ . ..+.+....-..++..++++||++|||+.|+++
T Consensus 820 -ERa~iL~~LR-----------~g~iP~~-~--~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 820 -ERASILTNLR-----------KGSIPEP-A--DFFDPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred -HHHHHHHhcc-----------cCCCCCC-c--ccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 1111111111 1111111 0 012223334467899999999999999999986
No 414
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.67 E-value=1.1e-16 Score=163.81 Aligned_cols=136 Identities=21% Similarity=0.363 Sum_probs=113.2
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
....|-.++.....+=+|+++..+++.+..|+||||.+||++-.+|.+.+.+-..+.|. ++.++..|+++.|. .+
T Consensus 675 HVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARF-YIAEltcAiesVHk----mG 749 (1034)
T KOG0608|consen 675 HVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARF-YIAELTCAIESVHK----MG 749 (1034)
T ss_pred hhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHH-HHHHHHHHHHHHHh----cc
Confidence 34567888888999999999999999999999999999999999998765544445555 55678999999994 58
Q ss_pred eeecCCCCc-------------------------------------------------------------------cccc
Q 040540 528 IIHCEGEDS-------------------------------------------------------------------VTQT 540 (669)
Q Consensus 528 i~h~d~~~~-------------------------------------------------------------------~~~~ 540 (669)
+||||+|+. ....
T Consensus 750 FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ah 829 (1034)
T KOG0608|consen 750 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAH 829 (1034)
T ss_pred ceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhh
Confidence 999999821 1123
Q ss_pred ccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCC
Q 040540 541 TTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTG 588 (669)
Q Consensus 541 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~ 588 (669)
..+||+.|+|||++....|+.-+|+||.|||||||+.|+.||.+....
T Consensus 830 slvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~ 877 (1034)
T KOG0608|consen 830 SLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPG 877 (1034)
T ss_pred hhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCC
Confidence 346999999999999999999999999999999999999999765443
No 415
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.66 E-value=7.2e-17 Score=152.00 Aligned_cols=130 Identities=19% Similarity=0.222 Sum_probs=106.0
Q ss_pred Cchhhhhhccccccccceecccccc-ccccceeeccCCCCChHHhhhcC----CCccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSN-PDFKALVLEFMPNGSLEKWLYSH----NYFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ey~~~g~L~~~l~~~----~~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
-.+|+..++.++|+|++.+...+.. +..+++++||.+ -+|.+.|+.+ ...++-....+|+-|+..|+.|||.
T Consensus 74 AcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~-- 150 (438)
T KOG0666|consen 74 ACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS-- 150 (438)
T ss_pred HHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh--
Confidence 4578999999999999999887766 788899999998 4999999753 2356666778899999999999994
Q ss_pred CCCCeeecCCCCcc--------------------------------cccccccccccCccccccCC-CcCccccchhhHH
Q 040540 524 SSAPIIHCEGEDSV--------------------------------TQTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGV 570 (669)
Q Consensus 524 ~~~~i~h~d~~~~~--------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv 570 (669)
.=|+|||+|+.. .....+-|..|.|||.+.+. .|+.+.||||.||
T Consensus 151 --NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGC 228 (438)
T KOG0666|consen 151 --NWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGC 228 (438)
T ss_pred --hheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHH
Confidence 479999999541 01112458899999999885 4999999999999
Q ss_pred HHHHHHhCCCCCC
Q 040540 571 LLMETFTRKRPTD 583 (669)
Q Consensus 571 il~el~tg~~p~~ 583 (669)
|..||+|-++-|.
T Consensus 229 IfaElLtl~PlF~ 241 (438)
T KOG0666|consen 229 IFAELLTLEPLFK 241 (438)
T ss_pred HHHHHHccCcccc
Confidence 9999999876654
No 416
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.64 E-value=3.1e-16 Score=167.14 Aligned_cols=186 Identities=19% Similarity=0.143 Sum_probs=122.0
Q ss_pred Cchhhhhhcccccccc-----ceecccccc--------ccccceeeccCCCCChHHhhhcCC------------------
Q 040540 449 FDSECEVLRNVRHRNL-----IKIISSCSN--------PDFKALVLEFMPNGSLEKWLYSHN------------------ 497 (669)
Q Consensus 449 ~~~e~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~ey~~~g~L~~~l~~~~------------------ 497 (669)
...|+.++.+++|+++ ++++++|.. ....++||||+++|+|.++++...
T Consensus 219 ~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~ 298 (507)
T PLN03224 219 GMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIP 298 (507)
T ss_pred hHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchh
Confidence 3446666777766554 566777643 345789999999999999987421
Q ss_pred -----CccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCccc------------------------cc--cccccc
Q 040540 498 -----YFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVT------------------------QT--TTMATI 546 (669)
Q Consensus 498 -----~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~~~------------------------~~--~~~gt~ 546 (669)
..++|..+..++.++++|+.|+|. .+++|||+|+... .. ...+|+
T Consensus 299 ~~~~~~~~~~~~~~~i~~ql~~aL~~lH~----~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp 374 (507)
T PLN03224 299 DNMPQDKRDINVIKGVMRQVLTGLRKLHR----IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDP 374 (507)
T ss_pred hhcccccCCHHHHHHHHHHHHHHHHHHHH----CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCc
Confidence 123566778899999999999995 4799999985310 00 112478
Q ss_pred ccCccccccCCC--------------------cC--ccccchhhHHHHHHHHhCCC-CCCcCCCC-------CccHHHHH
Q 040540 547 GYMAPEYGSEGI--------------------VS--AKCDVYSYGVLLMETFTRKR-PTDEMFTG-------EMSLRRWV 596 (669)
Q Consensus 547 ~y~aPE~~~~~~--------------------~~--~~~Dv~s~Gvil~el~tg~~-p~~~~~~~-------~~~l~~~~ 596 (669)
.|+|||.+.... |+ .+.||||+||+++||++|.. |+.....- ...+..|.
T Consensus 375 ~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r 454 (507)
T PLN03224 375 RYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWR 454 (507)
T ss_pred ceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHH
Confidence 999999875321 12 35799999999999999975 65431110 11122221
Q ss_pred HHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCC---CCCCCHHHHHH
Q 040540 597 KESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESP---DKRMHMTDAAA 652 (669)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P---~~Rps~~~v~~ 652 (669)
... ....+++..+.......+++.+++..+| .+|+|++|+++
T Consensus 455 ~~~--------------~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 455 MYK--------------GQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred hhc--------------ccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 110 0011122233445678899999999876 68999999874
No 417
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.64 E-value=6.7e-16 Score=160.23 Aligned_cols=189 Identities=24% Similarity=0.307 Sum_probs=140.0
Q ss_pred hccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCC
Q 040540 456 LRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGED 535 (669)
Q Consensus 456 l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~ 535 (669)
++.+.|.|+.+++|.|..+...++|.+||.+|+|.+.+......++|.....+++++++|++|+|.. +...|...+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeecc
Confidence 3568899999999999999999999999999999999998788899999999999999999999964 3337877664
Q ss_pred ccc--------c-------------------cccccccccCccccccCCC-------cCccccchhhHHHHHHHHhCCCC
Q 040540 536 SVT--------Q-------------------TTTMATIGYMAPEYGSEGI-------VSAKCDVYSYGVLLMETFTRKRP 581 (669)
Q Consensus 536 ~~~--------~-------------------~~~~gt~~y~aPE~~~~~~-------~~~~~Dv~s~Gvil~el~tg~~p 581 (669)
..- . ....-..-|.|||.+.... .+.++||||||++++|+++.+.|
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 310 0 0001223589999886631 46689999999999999999999
Q ss_pred CCcCCCCCc--cHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHhH
Q 040540 582 TDEMFTGEM--SLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAKLKKIK 658 (669)
Q Consensus 582 ~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~l~~~~ 658 (669)
|+....... .+...++.. ......|.+... .+....+..++.+||.++|.+||++++|...++.+-
T Consensus 158 ~~~~~~~~~~~eii~~~~~~----~~~~~rP~i~~~-------~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVKKG----GSNPFRPSIELL-------NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred cccccccCChHHHHHHHHhc----CCCCcCcchhhh-------hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 986443322 344444441 111222222211 133346789999999999999999999988877654
No 418
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.64 E-value=3.5e-16 Score=143.08 Aligned_cols=195 Identities=19% Similarity=0.248 Sum_probs=134.0
Q ss_pred hhhhhhccccccccceecccccc--------ccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcC
Q 040540 451 SECEVLRNVRHRNLIKIISSCSN--------PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHG 522 (669)
Q Consensus 451 ~e~~~l~~l~h~niv~l~~~~~~--------~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~ 522 (669)
+|+.++..++|+|++.++..|.. ....++|+++|. -+|+-+|.+....++..+..+++.+...||.|+|
T Consensus 65 reikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ce-hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH-- 141 (376)
T KOG0669|consen 65 REIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCE-HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH-- 141 (376)
T ss_pred HHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhh-hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHH--
Confidence 57889999999999999988854 234689999997 5899999877677888999999999999999999
Q ss_pred CCCCCeeecCCCCcc-----------------------------cccccccccccCccccccC-CCcCccccchhhHHHH
Q 040540 523 HSSAPIIHCEGEDSV-----------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLL 572 (669)
Q Consensus 523 ~~~~~i~h~d~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil 572 (669)
+..|+|||.|... ..+..+-|..|.+||.+.+ +.|+.+.|||..|||+
T Consensus 142 --r~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCim 219 (376)
T KOG0669|consen 142 --RNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIM 219 (376)
T ss_pred --HhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHH
Confidence 4579999998430 0111234889999998877 5599999999999999
Q ss_pred HHHHhCCCCCCcCCCC-CccHHHHHHHhC-CCCcccc--------cc-ccccchhhhhhhhHHH------HHHHHHHHhh
Q 040540 573 METFTRKRPTDEMFTG-EMSLRRWVKESL-PHRLSEV--------VD-TNLVREEQAFSAKMDC------LLSIMDLALD 635 (669)
Q Consensus 573 ~el~tg~~p~~~~~~~-~~~l~~~~~~~~-~~~~~~~--------~~-~~~~~~~~~~~~~~~~------~~~~~~l~~~ 635 (669)
.||.||.+-+...... ..++..-+-..+ ++.+..+ +. +.+.... +....+. .+.+.+++.+
T Consensus 220 aeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~--~rkv~n~~kp~~kd~~a~dLle~ 297 (376)
T KOG0669|consen 220 AEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQ--KRKVKNRLKPYVKDDEALDLLEK 297 (376)
T ss_pred HHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcch--hhhhhhhcccccCChhHHHHHHH
Confidence 9999998776542211 111111110000 1111110 00 0000000 0001111 1256789999
Q ss_pred cccCCCCCCCCHHHHHH
Q 040540 636 CCMESPDKRMHMTDAAA 652 (669)
Q Consensus 636 c~~~~P~~Rps~~~v~~ 652 (669)
.+..||.+|+.+.+++.
T Consensus 298 ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 298 LLKLDPTKRIDADQALN 314 (376)
T ss_pred HhccCcccCcchHhhhc
Confidence 99999999999998875
No 419
>PLN03150 hypothetical protein; Provisional
Probab=99.63 E-value=1.1e-15 Score=169.43 Aligned_cols=148 Identities=30% Similarity=0.514 Sum_probs=119.4
Q ss_pred CChhhHHHHHHHHhhcCCCcccccCCCCCCCCCC-----CccceeeCCC--C--CCEEEEEcCCCCCcccccccccCCCC
Q 040540 6 DLTTDQSSLLAFKAHAFDYRSALANNWSISYPIC-----SWAGISCGSR--H--QRVTALNLSDMGLGGTIPLHFGNLSF 76 (669)
Q Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~l~~~w~~~~~~c-----~~~g~~c~~~--~--~~v~~L~ls~~~l~~~~~~~~~~l~~ 76 (669)
.+..|..||+.+|+++.++.. .+|+. ++| .|.|+.|... . ..|+.|+|++|++.|.+|..++.+++
T Consensus 369 t~~~~~~aL~~~k~~~~~~~~---~~W~g--~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~ 443 (623)
T PLN03150 369 TLLEEVSALQTLKSSLGLPLR---FGWNG--DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRH 443 (623)
T ss_pred cCchHHHHHHHHHHhcCCccc---CCCCC--CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCC
Confidence 466789999999998865432 24863 455 6999999532 1 24889999999999999999999999
Q ss_pred CCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccccccccCccccCCcccCCC-CCCCeeecc
Q 040540 77 LVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNL-SRLEMLRAE 155 (669)
Q Consensus 77 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l-~~L~~L~l~ 155 (669)
|+.|+|++|.+.|.+|..++.+++|+.|+|++|+++|.+|+.++++++|++|+|++|+++|.+|..++.+ .++..+++.
T Consensus 444 L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~ 523 (623)
T PLN03150 444 LQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFT 523 (623)
T ss_pred CCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEec
Confidence 9999999999999999889999999999999999999899999999999999999999988888877653 345555555
Q ss_pred ccc
Q 040540 156 FNI 158 (669)
Q Consensus 156 ~n~ 158 (669)
+|.
T Consensus 524 ~N~ 526 (623)
T PLN03150 524 DNA 526 (623)
T ss_pred CCc
Confidence 554
No 420
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.62 E-value=4.7e-16 Score=140.34 Aligned_cols=198 Identities=19% Similarity=0.264 Sum_probs=139.3
Q ss_pred ccCchhhhhhcccc-ccccceecccccccc--ccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 447 RSFDSECEVLRNVR-HRNLIKIISSCSNPD--FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 447 ~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
+.+.+|+.++..++ ||||+++++...++. ...+|+||+.+.+...+.. .+...+..-++.++.+||.|+|
T Consensus 77 kKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCH--- 149 (338)
T KOG0668|consen 77 KKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCH--- 149 (338)
T ss_pred HHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHH---
Confidence 45678999999997 999999999987754 4579999999887766653 3666777889999999999999
Q ss_pred CCCCeeecCCCCcc-------------------------cccccccccccCccccccC-CCcCccccchhhHHHHHHHHh
Q 040540 524 SSAPIIHCEGEDSV-------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 524 ~~~~i~h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~t 577 (669)
+.+|+|||+|+.. .....+.+..|..||.+.+ ..|+..-|+|||||++.+|+-
T Consensus 150 -S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miF 228 (338)
T KOG0668|consen 150 -SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 228 (338)
T ss_pred -hcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHh
Confidence 5689999999651 1223346778899998876 558999999999999999999
Q ss_pred CCCCCCcCCCCCccHHHHHH------------Hh---CCCCccccccccccchhhhh--hh-hHHHHHHHHHHHhhcccC
Q 040540 578 RKRPTDEMFTGEMSLRRWVK------------ES---LPHRLSEVVDTNLVREEQAF--SA-KMDCLLSIMDLALDCCME 639 (669)
Q Consensus 578 g~~p~~~~~~~~~~l~~~~~------------~~---~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~l~~~c~~~ 639 (669)
.+.||........+++.-++ .. ++.+...++..-....-.+| +. ..-..+++++++.+.+.-
T Consensus 229 rkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrY 308 (338)
T KOG0668|consen 229 RKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRY 308 (338)
T ss_pred ccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhh
Confidence 99999764443333333222 11 11111111111000000000 01 112346788999999999
Q ss_pred CCCCCCCHHHHHH
Q 040540 640 SPDKRMHMTDAAA 652 (669)
Q Consensus 640 ~P~~Rps~~~v~~ 652 (669)
|..+|||++|++.
T Consensus 309 DHqeRlTakEam~ 321 (338)
T KOG0668|consen 309 DHQERLTAKEAMA 321 (338)
T ss_pred ccccccchHHHhc
Confidence 9999999999865
No 421
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.59 E-value=3.7e-15 Score=143.20 Aligned_cols=152 Identities=29% Similarity=0.396 Sum_probs=128.1
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+..+..++|++++++++++......++++||+++++|.+++......+++..+..++.+++++++++|..
T Consensus 36 ~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---- 111 (215)
T cd00180 36 EELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN---- 111 (215)
T ss_pred HHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC----
Confidence 4567889999999999999999999888888999999999999999976434688999999999999999999954
Q ss_pred CeeecCCCCccc--------------------------ccccccccccCccccccCC-CcCccccchhhHHHHHHHHhCC
Q 040540 527 PIIHCEGEDSVT--------------------------QTTTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 527 ~i~h~d~~~~~~--------------------------~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~ 579 (669)
+++|+|+++... .....+...|++||..... .++.++|+|++|++++|+
T Consensus 112 ~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---- 187 (215)
T cd00180 112 GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---- 187 (215)
T ss_pred CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----
Confidence 799999874310 1112367789999988776 788999999999999999
Q ss_pred CCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 580 RPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 580 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
..+.+++.+|++.+|++||++.++++.
T Consensus 188 -----------------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 -----------------------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred -----------------------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 124688999999999999999999764
No 422
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.54 E-value=3.1e-15 Score=152.10 Aligned_cols=132 Identities=21% Similarity=0.271 Sum_probs=112.3
Q ss_pred cCchhhhhhcccc---ccccceeccccccccccceeecc-CCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 448 SFDSECEVLRNVR---HRNLIKIISSCSNPDFKALVLEF-MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 448 ~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ey-~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
....|+.+|..+. |+||+++++++.++++.||++|- -++.+|+++|..+ ..+++.+..-|+.||+-|+++||.
T Consensus 612 tVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~k-p~m~E~eAk~IFkQV~agi~hlh~-- 688 (772)
T KOG1152|consen 612 TVPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFK-PRMDEPEAKLIFKQVVAGIKHLHD-- 688 (772)
T ss_pred ccchhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhcc-CccchHHHHHHHHHHHhccccccc--
Confidence 3456899999887 99999999999999999999996 4778999999754 458999999999999999999994
Q ss_pred CCCCeeecCCCCcc-----------------------cccccccccccCccccccCCCcC-ccccchhhHHHHHHHHhCC
Q 040540 524 SSAPIIHCEGEDSV-----------------------TQTTTMATIGYMAPEYGSEGIVS-AKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 524 ~~~~i~h~d~~~~~-----------------------~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~Gvil~el~tg~ 579 (669)
-+|+|||+|+.. .--.++||..|.|||++.+.+|- ..-|||++||+||-++...
T Consensus 689 --~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyke 766 (772)
T KOG1152|consen 689 --QGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKE 766 (772)
T ss_pred --cCceecccccccEEEecCCeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEecc
Confidence 489999999651 11234699999999999998764 5689999999999999999
Q ss_pred CCCCc
Q 040540 580 RPTDE 584 (669)
Q Consensus 580 ~p~~~ 584 (669)
.||..
T Consensus 767 npyyn 771 (772)
T KOG1152|consen 767 NPYYN 771 (772)
T ss_pred CCCcC
Confidence 99853
No 423
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.54 E-value=1e-15 Score=141.57 Aligned_cols=134 Identities=22% Similarity=0.249 Sum_probs=106.6
Q ss_pred ccccCchhhhhhccccccccceeccccccc-----cccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhh
Q 040540 445 AFRSFDSECEVLRNVRHRNLIKIISSCSNP-----DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL 519 (669)
Q Consensus 445 ~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~l 519 (669)
..+.+.+|..++...+|.|++..++..+-+ .+.|++.|.|. .+|.+.|-+ ..+++-....-+..||.||++||
T Consensus 95 s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQ-SDLHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYL 172 (449)
T KOG0664|consen 95 SCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQ-SDLHKIIVS-PQALTPDHVKVFVYQILRGLKYL 172 (449)
T ss_pred HHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHH-hhhhheecc-CCCCCcchhhhhHHHHHhhhHHH
Confidence 445677899999999999999988776543 34578889886 588888864 45677667777889999999999
Q ss_pred hcCCCCCCeeecCCCCcc--------------------------cccccccccccCccccccC-CCcCccccchhhHHHH
Q 040540 520 RHGHSSAPIIHCEGEDSV--------------------------TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLL 572 (669)
Q Consensus 520 h~~~~~~~i~h~d~~~~~--------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil 572 (669)
|. .+|.|||+|+.. ..+..+-|-.|.|||++.+ +.|+.+.||||.|||.
T Consensus 173 Hs----A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIF 248 (449)
T KOG0664|consen 173 HT----ANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIF 248 (449)
T ss_pred hh----cchhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHH
Confidence 94 589999999641 1122245778999999988 4599999999999999
Q ss_pred HHHHhCCCCCCc
Q 040540 573 METFTRKRPTDE 584 (669)
Q Consensus 573 ~el~tg~~p~~~ 584 (669)
.|++.+++-|..
T Consensus 249 aELLgRrILFQA 260 (449)
T KOG0664|consen 249 AELLQRKILFQA 260 (449)
T ss_pred HHHHhhhhhhhc
Confidence 999999988765
No 424
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.53 E-value=1.5e-14 Score=142.73 Aligned_cols=196 Identities=24% Similarity=0.302 Sum_probs=138.6
Q ss_pred Cchhhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 449 FDSECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 449 ~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
...|++++..+ .+.|++++.++....+.+.+|+||++.-...++.++ ++..+...+++...+||+++|+ .+
T Consensus 81 i~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~----~G 152 (418)
T KOG1167|consen 81 ILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHK----NG 152 (418)
T ss_pred HHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhc----cC
Confidence 55788888877 489999999999999999999999999999998875 5677888899999999999995 58
Q ss_pred eeecCCCCc----------------------------------------------------------------------c
Q 040540 528 IIHCEGEDS----------------------------------------------------------------------V 537 (669)
Q Consensus 528 i~h~d~~~~----------------------------------------------------------------------~ 537 (669)
|||||+|++ .
T Consensus 153 IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~ 232 (418)
T KOG1167|consen 153 IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPS 232 (418)
T ss_pred ccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccc
Confidence 999999932 0
Q ss_pred cccccccccccCccccccC-CCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHH----------HhCCCC--c
Q 040540 538 TQTTTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVK----------ESLPHR--L 604 (669)
Q Consensus 538 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~----------~~~~~~--~ 604 (669)
......||+||.|||++.. ..-+.+.||||.|||++-+++++.||.....+...+.+-+. ...+.+ +
T Consensus 233 ~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l 312 (418)
T KOG1167|consen 233 ERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILL 312 (418)
T ss_pred eecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceee
Confidence 0111249999999999876 34678999999999999999999999654333332222110 001111 0
Q ss_pred cc---------------ccc-ccccchhh---hhhhhHH-HHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 605 SE---------------VVD-TNLVREEQ---AFSAKMD-CLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 605 ~~---------------~~~-~~~~~~~~---~~~~~~~-~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
.+ .++ ..+..... ....+.+ .+..+.++..+|+..||.+|-|++|+++
T Consensus 313 ~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 313 WQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred eccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 00 000 00000000 0001112 3347889999999999999999999986
No 425
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.51 E-value=2.9e-14 Score=138.71 Aligned_cols=134 Identities=26% Similarity=0.336 Sum_probs=112.5
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
..+..|+..+..++|+|++++++.+......++++||+++++|.+++......+++.....++.++++++.|+|..
T Consensus 42 ~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---- 117 (225)
T smart00221 42 EEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---- 117 (225)
T ss_pred HHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC----
Confidence 4566788899999999999999999888889999999999999999976433378899999999999999999953
Q ss_pred CeeecCCCCcc---------------------cc-----cccccccccCccccc-cCCCcCccccchhhHHHHHHHHhCC
Q 040540 527 PIIHCEGEDSV---------------------TQ-----TTTMATIGYMAPEYG-SEGIVSAKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 527 ~i~h~d~~~~~---------------------~~-----~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~Gvil~el~tg~ 579 (669)
+++|+|+++.. .. ....++..|++||.. ....++.++|||+||++++||++|+
T Consensus 118 ~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~ 197 (225)
T smart00221 118 GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGP 197 (225)
T ss_pred CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCC
Confidence 89999987320 00 223477789999998 5566788999999999999999999
Q ss_pred CCCCc
Q 040540 580 RPTDE 584 (669)
Q Consensus 580 ~p~~~ 584 (669)
.||..
T Consensus 198 ~pf~~ 202 (225)
T smart00221 198 EPFSG 202 (225)
T ss_pred CCccc
Confidence 99965
No 426
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.48 E-value=3e-14 Score=132.04 Aligned_cols=194 Identities=17% Similarity=0.211 Sum_probs=133.6
Q ss_pred ccccCchhhhhhccc-cccccceecc-ccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcC
Q 040540 445 AFRSFDSECEVLRNV-RHRNLIKIIS-SCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHG 522 (669)
Q Consensus 445 ~~~~~~~e~~~l~~l-~h~niv~l~~-~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~ 522 (669)
..++|.+|...--.+ .|.||+.-+. .++..+....++||+|.|+|..-+... .+.+....+++.|++.|+.|+|
T Consensus 63 t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~--GigE~~~K~v~~ql~SAi~fMH-- 138 (378)
T KOG1345|consen 63 TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAA--GIGEANTKKVFAQLLSAIEFMH-- 138 (378)
T ss_pred hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCcc--cccHHHHHHHHHHHHHHHHHhh--
Confidence 346777777665444 4889988765 456666777899999999999998653 3677778889999999999999
Q ss_pred CCCCCeeecCCCCc----------------cccccccc--------ccccCccccccC---C--CcCccccchhhHHHHH
Q 040540 523 HSSAPIIHCEGEDS----------------VTQTTTMA--------TIGYMAPEYGSE---G--IVSAKCDVYSYGVLLM 573 (669)
Q Consensus 523 ~~~~~i~h~d~~~~----------------~~~~~~~g--------t~~y~aPE~~~~---~--~~~~~~Dv~s~Gvil~ 573 (669)
+..++|||+|.. ...+...| +-.|.|||.... + ...+..|||.|||++|
T Consensus 139 --sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f 216 (378)
T KOG1345|consen 139 --SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFF 216 (378)
T ss_pred --ccchhhcccccceEEEecCCccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeee
Confidence 458999999943 11222233 346889997643 2 2556899999999999
Q ss_pred HHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 574 ETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 574 el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
..+||+.||...........+|.+-.-... +.+... .......+..+..+-+.++|.+|....++.++
T Consensus 217 ~cltG~~PWQka~~~d~~Y~~~~~w~~rk~------~~~P~~------F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 217 YCLTGKFPWQKASIMDKPYWEWEQWLKRKN------PALPKK------FNPFSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred eeecCCCcchhhhccCchHHHHHHHhcccC------ccCchh------hcccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 999999999864444445555554322111 111110 01123345677778889999999777777766
Q ss_pred HHH
Q 040540 654 LKK 656 (669)
Q Consensus 654 l~~ 656 (669)
-..
T Consensus 285 rk~ 287 (378)
T KOG1345|consen 285 RKC 287 (378)
T ss_pred HHH
Confidence 443
No 427
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.48 E-value=1.5e-13 Score=119.53 Aligned_cols=198 Identities=18% Similarity=0.166 Sum_probs=134.3
Q ss_pred chhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCee
Q 040540 450 DSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPII 529 (669)
Q Consensus 450 ~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~ 529 (669)
.+|+..++.++|.|+|++++..-.+....+|+|||+ .+|..+..+-...++.....+++.|..+|+.|+|. ..+.
T Consensus 49 lreicllkelkhknivrl~dvlhsdkkltlvfe~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchs----hnvl 123 (292)
T KOG0662|consen 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHS----HNVL 123 (292)
T ss_pred HHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhh----hhhh
Confidence 368889999999999999999888888899999997 58888877666678888888999999999999994 4799
Q ss_pred ecCCCCcc-------------------------cccccccccccCccccccCCC-cCccccchhhHHHHHHHHhCCCCCC
Q 040540 530 HCEGEDSV-------------------------TQTTTMATIGYMAPEYGSEGI-VSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 530 h~d~~~~~-------------------------~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
|||+|+.. -....+-|..|.+|.++.+.+ |+...|+||.|||+.|+.....|..
T Consensus 124 hrdlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplf 203 (292)
T KOG0662|consen 124 HRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203 (292)
T ss_pred hccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCC
Confidence 99999641 011123578899999988865 9999999999999999987555543
Q ss_pred cCCCCCccHHHHHHH--hC-CCCccc---cccccccchhhhhhhhH----HHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 584 EMFTGEMSLRRWVKE--SL-PHRLSE---VVDTNLVREEQAFSAKM----DCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 584 ~~~~~~~~l~~~~~~--~~-~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
....-..++.+..+. .. .+.+.. .-|.....-.+....+. .....-.++..+.+.-+|.+|-+++++++
T Consensus 204 pg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 204 PGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 211111223222221 11 111111 11110000000011122 22234567778888889999999998765
No 428
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.43 E-value=4.9e-13 Score=133.87 Aligned_cols=80 Identities=21% Similarity=0.301 Sum_probs=62.5
Q ss_pred hhhhhhcccc--------ccccceecccccc----ccccceeeccCCCCChHHhhhcC-CCccCHHHHHHHHHhHHhhhh
Q 040540 451 SECEVLRNVR--------HRNLIKIISSCSN----PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALE 517 (669)
Q Consensus 451 ~e~~~l~~l~--------h~niv~l~~~~~~----~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~ 517 (669)
.|+.++..++ ..+||++++.+.. ...+++|+||.. -+|-.+|... -.-++.....+|+.||+.||.
T Consensus 123 DEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLG-dnLLklI~~s~YrGlpl~~VK~I~~qvL~GLd 201 (590)
T KOG1290|consen 123 DEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLG-DNLLKLIKYSNYRGLPLSCVKEICRQVLTGLD 201 (590)
T ss_pred HHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhh-hHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHH
Confidence 4666666553 3478999998854 567899999984 5888888753 235888889999999999999
Q ss_pred hhhcCCCCCCeeecCCC
Q 040540 518 YLRHGHSSAPIIHCEGE 534 (669)
Q Consensus 518 ~lh~~~~~~~i~h~d~~ 534 (669)
|||.. .+|||-|+|
T Consensus 202 YLH~e---cgIIHTDlK 215 (590)
T KOG1290|consen 202 YLHRE---CGIIHTDLK 215 (590)
T ss_pred HHHHh---cCccccCCC
Confidence 99965 589998877
No 429
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.42 E-value=9e-14 Score=151.73 Aligned_cols=187 Identities=16% Similarity=0.128 Sum_probs=137.6
Q ss_pred CchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
+..|..+-..++|+|++..+..+.......-+||||++ +|+..+.+. ..+...++.-++.|+.+|++|+|. .++
T Consensus 368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~----~Gi 441 (601)
T KOG0590|consen 368 ITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHS----MGL 441 (601)
T ss_pred hhhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHh----cCc
Confidence 44566677788999998887777665555555999998 999999853 357778888899999999999995 489
Q ss_pred eecCCCCc-----------------------------ccccccccccccCccccccCCCcCc-cccchhhHHHHHHHHhC
Q 040540 529 IHCEGEDS-----------------------------VTQTTTMATIGYMAPEYGSEGIVSA-KCDVYSYGVLLMETFTR 578 (669)
Q Consensus 529 ~h~d~~~~-----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~-~~Dv~s~Gvil~el~tg 578 (669)
.|||+|.. ......+|+-.|+|||++.+..|.+ .+||||.||++..|++|
T Consensus 442 ahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~ 521 (601)
T KOG0590|consen 442 AHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILG 521 (601)
T ss_pred eeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecC
Confidence 99999843 1123346899999999999988886 58999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAA 652 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~ 652 (669)
+.||......+..+.+. ...... .+..+ ......+.+.....++.++++.||.+|-|+++|++
T Consensus 522 ~~~Wk~a~~~~~~~~~~----~~~~~~-----~~~~~--~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 522 RFPWKVAKKSDNSFKTN----NYSDQR-----NIFEG--PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred CCccccccccccchhhh----cccccc-----ccccC--hHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 99997644333221000 000000 01111 11224455667789999999999999999999986
No 430
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.38 E-value=2.3e-13 Score=136.94 Aligned_cols=130 Identities=19% Similarity=0.166 Sum_probs=104.6
Q ss_pred chhhhhhcccc------ccccceeccccccccccceeeccCCCCChHHhhhcCC--CccCHHHHHHHHHhHHhhhhhhhc
Q 040540 450 DSECEVLRNVR------HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN--YFLDILERLNIMIDVGSALEYLRH 521 (669)
Q Consensus 450 ~~e~~~l~~l~------h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lh~ 521 (669)
..|++++.++. .-++++++..|...+..|||+|-.. .+|.++|+..+ ..+.......++.|+.-||..|.
T Consensus 476 l~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK- 553 (752)
T KOG0670|consen 476 LKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK- 553 (752)
T ss_pred hHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH-
Confidence 35777887774 3478888999999999999999765 69999998643 34667778889999999999997
Q ss_pred CCCCCCeeecCCCCccc---------------ccc---------cccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 522 GHSSAPIIHCEGEDSVT---------------QTT---------TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 522 ~~~~~~i~h~d~~~~~~---------------~~~---------~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
..+|+|+|+|+... ... ..-+..|.|||++.+-.|+..-|+||.||+|||+-|
T Consensus 554 ---~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYt 630 (752)
T KOG0670|consen 554 ---KCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYT 630 (752)
T ss_pred ---hcCeeecccCccceEeccCcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeec
Confidence 35899999996411 011 112457999999999999999999999999999999
Q ss_pred CCCCCCc
Q 040540 578 RKRPTDE 584 (669)
Q Consensus 578 g~~p~~~ 584 (669)
|++-|.+
T Consensus 631 GkIlFpG 637 (752)
T KOG0670|consen 631 GKILFPG 637 (752)
T ss_pred cceecCC
Confidence 9998865
No 431
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.37 E-value=2.2e-14 Score=145.90 Aligned_cols=200 Identities=28% Similarity=0.420 Sum_probs=145.5
Q ss_pred EEEcCCCCCcccccc-cccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCccccccccccc
Q 040540 55 ALNLSDMGLGGTIPL-HFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYN 133 (669)
Q Consensus 55 ~L~ls~~~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 133 (669)
.|.|++-.+....-. .-..+..-...||+.|++. .+|..+..+..|..|.|..|.+. .+|..+.+|..|++|||+.|
T Consensus 54 ~l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~N 131 (722)
T KOG0532|consen 54 RLLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSN 131 (722)
T ss_pred ccccccchhhcCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccc
Confidence 355555555433211 1245666777888888887 77888888888888888888887 77888888888888888888
Q ss_pred CccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCCCCCc
Q 040540 134 NFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGLIPP 213 (669)
Q Consensus 134 ~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 213 (669)
+++ .+|..++.|+ |+.|-+++|+++ .+|..++.+..|..|+.+.|++. .+|..++.+.+|+.|.++.|.+.. +|.
T Consensus 132 qlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~-lp~ 206 (722)
T KOG0532|consen 132 QLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLED-LPE 206 (722)
T ss_pred hhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhh-CCH
Confidence 887 6777777776 788888888775 67777777778888888888886 566677888888888888887764 466
Q ss_pred cccCCCCCcEEEcccCCCccccchhhhccCCCCCeeecccCcccccCCcccc
Q 040540 214 TIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNSIT 265 (669)
Q Consensus 214 ~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l~~~~p~~~~ 265 (669)
.+..| .|..||++.|+++ .+|..|. .|+.|++|-|.+|-+. ..|..++
T Consensus 207 El~~L-pLi~lDfScNkis-~iPv~fr-~m~~Lq~l~LenNPLq-SPPAqIC 254 (722)
T KOG0532|consen 207 ELCSL-PLIRLDFSCNKIS-YLPVDFR-KMRHLQVLQLENNPLQ-SPPAQIC 254 (722)
T ss_pred HHhCC-ceeeeecccCcee-ecchhhh-hhhhheeeeeccCCCC-CChHHHH
Confidence 66644 3677777777776 6777666 5777777777777765 3444443
No 432
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.30 E-value=7.8e-12 Score=122.25 Aligned_cols=172 Identities=20% Similarity=0.248 Sum_probs=115.0
Q ss_pred ccccccceecccccc---------------------------ccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHh
Q 040540 459 VRHRNLIKIISSCSN---------------------------PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMID 511 (669)
Q Consensus 459 l~h~niv~l~~~~~~---------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~ 511 (669)
.+|||||++.+++.+ +...|+||.-.+. +|.+++-.. ..+...+.-|..|
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~--~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR--HRSYRTGRVILAQ 349 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC--CCchHHHHHHHHH
Confidence 468888887665432 2345677776653 788877542 2344445567789
Q ss_pred HHhhhhhhhcCCCCCCeeecCCCCcc-----------------------------------cccccccccccCccccccC
Q 040540 512 VGSALEYLRHGHSSAPIIHCEGEDSV-----------------------------------TQTTTMATIGYMAPEYGSE 556 (669)
Q Consensus 512 i~~~l~~lh~~~~~~~i~h~d~~~~~-----------------------------------~~~~~~gt~~y~aPE~~~~ 556 (669)
..+|+.|||. .+|.|||+|... ......|...-||||+...
T Consensus 350 lLEav~hL~~----hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 350 LLEAVTHLHK----HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHH----ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 9999999994 479999999430 0112246777899998754
Q ss_pred CC------cCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHH
Q 040540 557 GI------VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIM 630 (669)
Q Consensus 557 ~~------~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (669)
.. --.|+|.|+.|.+.||+++...||........+...+-...+| . .++.++..+.
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLP---------a---------lp~~vpp~~r 487 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLP---------A---------LPSRVPPVAR 487 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCC---------C---------CcccCChHHH
Confidence 22 1259999999999999999999997622212222222222221 1 1334556778
Q ss_pred HHHhhcccCCCCCCCCHHHHHHHHH
Q 040540 631 DLALDCCMESPDKRMHMTDAAAKLK 655 (669)
Q Consensus 631 ~l~~~c~~~~P~~Rps~~~v~~~l~ 655 (669)
+++...+++||++||+..-+.+.|+
T Consensus 488 qlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 488 QLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHHHhcCCccccCCccHHHhHHH
Confidence 9999999999999999877766654
No 433
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.29 E-value=2.4e-13 Score=138.50 Aligned_cols=175 Identities=27% Similarity=0.392 Sum_probs=120.4
Q ss_pred CCCCCCEEEccCCcCCccCCccccCCcccccccccccCccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEE
Q 040540 97 QLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNL 176 (669)
Q Consensus 97 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L 176 (669)
.+..-...||+.|++. .+|..+..+..|+.|.|..|.+. .+|..++++..|.+++++.|+++ .+|..++.|+ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 4555667899999998 78999999999999999999986 67778888888888888888776 5666666654 6777
Q ss_pred EcccCCCcccCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEcccCCCccccchhhhccCCCCCeeecccCcc
Q 040540 177 GLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGLIPPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNL 256 (669)
Q Consensus 177 ~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l 256 (669)
.+++|+++ .+|..++.+..|..||.+.|.+. .+|..++++.+|+.|++..|.+. .+|..+. .| .|..||+|.|++
T Consensus 149 i~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~-~L-pLi~lDfScNki 223 (722)
T KOG0532|consen 149 IVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELC-SL-PLIRLDFSCNKI 223 (722)
T ss_pred EEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHh-CC-ceeeeecccCce
Confidence 77777775 66666776677777777777766 34566666666666666666664 4555554 22 345556665555
Q ss_pred cccCCccccCCCCCCEEeCCCCCcc
Q 040540 257 IGKIPNSITNATKLIGLDLGFNSFS 281 (669)
Q Consensus 257 ~~~~p~~~~~l~~L~~L~ls~n~l~ 281 (669)
. .+|-.|.+|..|++|-|.+|.+.
T Consensus 224 s-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 224 S-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred e-ecchhhhhhhhheeeeeccCCCC
Confidence 4 44555555555555555555554
No 434
>PLN03150 hypothetical protein; Provisional
Probab=99.25 E-value=1e-11 Score=137.87 Aligned_cols=107 Identities=28% Similarity=0.592 Sum_probs=78.4
Q ss_pred CCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccccccccCccccCCcccCCCCCCCeeecc
Q 040540 76 FLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLEMLRAE 155 (669)
Q Consensus 76 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~ 155 (669)
.++.|+|++|.+.|.+|..++.+++|+.|+|++|.+.|.+|..++.+++|+.|+|++|+++|.+|..+++|++|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 36777888888888888888888888888888888887788778888888888888888877777777777777777777
Q ss_pred cccccccCCcccCCC-CCCCEEEcccCC
Q 040540 156 FNIIGGTIPSRIGNL-RKLVNLGLWSCN 182 (669)
Q Consensus 156 ~n~l~~~~p~~~~~L-~~L~~L~l~~n~ 182 (669)
+|.++|.+|..++.+ .++..+++.+|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCc
Confidence 777777777666543 244455555444
No 435
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.21 E-value=1.1e-11 Score=131.64 Aligned_cols=199 Identities=34% Similarity=0.504 Sum_probs=147.8
Q ss_pred EEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCc-ccccccccccCccccCCcccCCCCCCCeeecccc
Q 040540 79 SLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLS-KLRILRLDYNNFTGPIPNSLFNLSRLEMLRAEFN 157 (669)
Q Consensus 79 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n 157 (669)
.|+++.|.+.. ....+..++.++.|++.+|.+. .+|.....+. +|+.|++++|.+. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 57777777642 2334556677888888888887 5666667774 8888888888886 56667788888888888888
Q ss_pred cccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEcccCCCccccch
Q 040540 158 IIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGLIPPTIFNISTMRILTLESNQLSGRLPS 237 (669)
Q Consensus 158 ~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~ 237 (669)
++. .+|...+.+.+|+.|++++|++. .+|..+.....|++|.+++|.+. ..+..+.++.++..+.+.+|++. .++.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 886 55555557888888888888887 56665566667888888888533 35667788888888888888875 3344
Q ss_pred hhhccCCCCCeeecccCcccccCCccccCCCCCCEEeCCCCCccccCccc
Q 040540 238 TIGHSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSGHIPNT 287 (669)
Q Consensus 238 ~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~ 287 (669)
.+. .+.++++|++++|.++...+ +....+++.|++++|.+....|..
T Consensus 250 ~~~-~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 250 SIG-NLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred hhc-cccccceecccccccccccc--ccccCccCEEeccCccccccchhh
Confidence 444 57789999999988864433 788889999999999887665544
No 436
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.19 E-value=2.5e-11 Score=128.93 Aligned_cols=196 Identities=36% Similarity=0.470 Sum_probs=149.0
Q ss_pred CEEEccCCcCCccCCccccCCcccccccccccCccccCCcccCCCC-CCCeeecccccccccCCcccCCCCCCCEEEccc
Q 040540 102 RVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLS-RLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWS 180 (669)
Q Consensus 102 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~ 180 (669)
..+++..|.+.. .+..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|.+. .+|..+..+++|+.|+++.
T Consensus 96 ~~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 96 PSLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred ceeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 367888888742 3344566688899999999987 6777777775 8999999999886 5556788899999999999
Q ss_pred CCCcccCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEcccCCCccccchhhhccCCCCCeeecccCcccccC
Q 040540 181 CNLQGQIPTEIGSLQNLKNLDLADNKLSGLIPPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKI 260 (669)
Q Consensus 181 n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l~~~~ 260 (669)
|++. .+|...+.+++|+.|++++|++.. +|..+.....|+++.+++|.+. .++..+. .+.++..+.+.+|++.. .
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~~-l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~-~~~~l~~l~l~~n~~~~-~ 247 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKISD-LPPEIELLSALEELDLSNNSII-ELLSSLS-NLKNLSGLELSNNKLED-L 247 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCcccc-CchhhhhhhhhhhhhhcCCcce-ecchhhh-hcccccccccCCceeee-c
Confidence 9987 566655578889999999999884 5666666777889999988533 3454444 57788888888887653 3
Q ss_pred CccccCCCCCCEEeCCCCCccccCccccCCCCCCCEEEccCCccccC
Q 040540 261 PNSITNATKLIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTTE 307 (669)
Q Consensus 261 p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 307 (669)
+..+..++.++.|++++|.++...+ ++.+.+++.|+++.|.+...
T Consensus 248 ~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~ 292 (394)
T COG4886 248 PESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNA 292 (394)
T ss_pred cchhccccccceecccccccccccc--ccccCccCEEeccCcccccc
Confidence 6677888889999999998874333 78888899999988887654
No 437
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.18 E-value=1.3e-11 Score=125.90 Aligned_cols=148 Identities=22% Similarity=0.327 Sum_probs=103.7
Q ss_pred ccccceeeccCCCCChHHhhhcC--CCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCc---------------
Q 040540 474 PDFKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS--------------- 536 (669)
Q Consensus 474 ~~~~~lv~ey~~~g~L~~~l~~~--~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~--------------- 536 (669)
..+.+|.|++|...+|-+||..+ ....++.....++.+++.|++| ++.+|+|.|+.
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y-------k~~ihrdlkp~nif~~~d~q~kIgDF 400 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY-------KGLIHRDLKPSNIFFSDDDQLKIGDF 400 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh-------ccchhhhccccccccccchhhhhhhh
Confidence 34567899999999999999642 3356777888999999999998 35789888732
Q ss_pred ----------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHh
Q 040540 537 ----------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKES 599 (669)
Q Consensus 537 ----------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~ 599 (669)
+..+..+||..||+||.+.+..|+.|+||||+|++++|+++ -..++..... +
T Consensus 401 gl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t----~------- 469 (516)
T KOG1033|consen 401 GLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIAT----L------- 469 (516)
T ss_pred hheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHh----h-------
Confidence 12344579999999999999999999999999999999988 4444332100 0
Q ss_pred CCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHH
Q 040540 600 LPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDA 650 (669)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v 650 (669)
..-...++++.... +. +.-.++..+++...|.+||++.++
T Consensus 470 -~d~r~g~ip~~~~~---------d~-p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 470 -TDIRDGIIPPEFLQ---------DY-PEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred -hhhhcCCCChHHhh---------cC-cHHHHHHHHhcCCCcccCchHHHH
Confidence 00001122222211 11 123578899999999999954443
No 438
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.02 E-value=1.6e-09 Score=112.06 Aligned_cols=194 Identities=25% Similarity=0.290 Sum_probs=138.3
Q ss_pred ccCchhhhhhcccccc-ccceeccccccccccceeeccCCCCChHHhhhcCC--CccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 447 RSFDSECEVLRNVRHR-NLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHN--YFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
..+..|......+.|+ +++++.+.+......+++++|+.++++.+++.... ..+.......++.+++.+++|+|..
T Consensus 42 ~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~- 120 (384)
T COG0515 42 ERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK- 120 (384)
T ss_pred HHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence 4566788888899888 79999988866666789999999999998877543 2688888999999999999999954
Q ss_pred CCCCeeecCCCCc-------------------------c-------cccccccccccCccccccC---CCcCccccchhh
Q 040540 524 SSAPIIHCEGEDS-------------------------V-------TQTTTMATIGYMAPEYGSE---GIVSAKCDVYSY 568 (669)
Q Consensus 524 ~~~~i~h~d~~~~-------------------------~-------~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~ 568 (669)
+++|||+|+. . ......||..|+|||.... ..+....|+||+
T Consensus 121 ---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~ 197 (384)
T COG0515 121 ---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSL 197 (384)
T ss_pred ---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHH
Confidence 5999999832 0 1133468999999999887 578899999999
Q ss_pred HHHHHHHHhCCCCCCcCCCC--CccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCC
Q 040540 569 GVLLMETFTRKRPTDEMFTG--EMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMH 646 (669)
Q Consensus 569 Gvil~el~tg~~p~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps 646 (669)
|++++++++|..|+...... .......+.............+.. .......+.+++.+|+..+|..|.+
T Consensus 198 g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~r~~ 268 (384)
T COG0515 198 GITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSN---------PELISKAASDLLKKLLAKDPKNRLS 268 (384)
T ss_pred HHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccc---------cchhhHHHHHHHHHHHhcCchhcCC
Confidence 99999999999996543221 112222222211110000000000 0122345678899999999999998
Q ss_pred HHHHHHH
Q 040540 647 MTDAAAK 653 (669)
Q Consensus 647 ~~~v~~~ 653 (669)
+.+....
T Consensus 269 ~~~~~~~ 275 (384)
T COG0515 269 SSSDLSH 275 (384)
T ss_pred HHHHhhc
Confidence 8877654
No 439
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.02 E-value=4.3e-10 Score=107.77 Aligned_cols=174 Identities=21% Similarity=0.267 Sum_probs=118.6
Q ss_pred hhccccccccceecccccccc-----ccceeeccCCCCChHHhhhcC---CCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 455 VLRNVRHRNLIKIISSCSNPD-----FKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 455 ~l~~l~h~niv~l~~~~~~~~-----~~~lv~ey~~~g~L~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
.+-.+.|.|+|+++.++.+.. ...++.|||..|++.++|++- ...+......++.-||..||.|||. +.+
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs--~~P 197 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS--CDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc--cCC
Confidence 355667999999998876533 345788999999999999862 2345666677889999999999995 589
Q ss_pred CeeecCCCC------------------c-----------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHh
Q 040540 527 PIIHCEGED------------------S-----------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT 577 (669)
Q Consensus 527 ~i~h~d~~~------------------~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 577 (669)
+|+|.+..= . .......|.++|.|||+......+.++|||+||....||..
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 999976430 0 00111236789999998887778889999999999999998
Q ss_pred CCCC-CCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 040540 578 RKRP-TDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAAAK 653 (669)
Q Consensus 578 g~~p-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~~~ 653 (669)
|..- ........ . .+.+...+ -.+... .=.+++.+|++..|..||+|++.+.-
T Consensus 278 lEiq~tnseS~~~---~-------ee~ia~~i-~~len~------------lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 278 LEIQSTNSESKVE---V-------EENIANVI-IGLENG------------LQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred heeccCCCcceee---h-------hhhhhhhe-eeccCc------------cccCcCcccccCCCCCCcchhhhhcC
Confidence 8764 22211000 0 00011100 000000 01356789999999999999988653
No 440
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.01 E-value=2.5e-10 Score=119.10 Aligned_cols=167 Identities=22% Similarity=0.238 Sum_probs=119.5
Q ss_pred chhhhhhcccc-ccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 450 DSECEVLRNVR-HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 450 ~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
..|..++..++ ||.++++...++.+...+++++|.-+|.++..+.+... ........+...++-|++++|. .++
T Consensus 44 ~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~-f~~~~~~~~~aelaLald~lh~----l~i 118 (612)
T KOG0603|consen 44 KQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVM-FDELDVAFYLAELALALDHLHK----LGI 118 (612)
T ss_pred ccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccCCc-hHHHHHHHHHHHHHHHHhhcch----hHH
Confidence 34566677776 99999999999999999999999999999998875433 4444444566677888999984 478
Q ss_pred eecCCCCc---------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCCcCCC
Q 040540 529 IHCEGEDS---------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFT 587 (669)
Q Consensus 529 ~h~d~~~~---------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~ 587 (669)
+++|.|.. ......+||..|||||+.. .+...+|.|||||+++||+||..||..
T Consensus 119 iyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~--- 193 (612)
T KOG0603|consen 119 AYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG--- 193 (612)
T ss_pred HHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch---
Confidence 88888632 1112226899999999998 568899999999999999999999865
Q ss_pred CCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCH
Q 040540 588 GEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHM 647 (669)
Q Consensus 588 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~ 647 (669)
..+..-.+.. ...+......+.+++.+...++|..|--.
T Consensus 194 --~~~~~Il~~~-------------------~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 194 --DTMKRILKAE-------------------LEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred --HHHHHHhhhc-------------------cCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 1111111100 11234445556677777778888777644
No 441
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.01 E-value=2.6e-10 Score=125.19 Aligned_cols=186 Identities=19% Similarity=0.207 Sum_probs=123.5
Q ss_pred cccCchhhhh--hccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCC
Q 040540 446 FRSFDSECEV--LRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGH 523 (669)
Q Consensus 446 ~~~~~~e~~~--l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 523 (669)
.++|.+.+.. ..-+++||++++...-..+...|+|-+|.. -+|+|.|.- +..+...+..-|+.|+.+|+..+|.
T Consensus 63 L~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvk-hnLyDRlST-RPFL~~iEKkWiaFQLL~al~qcH~-- 138 (1431)
T KOG1240|consen 63 LRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVK-HNLYDRLST-RPFLVLIEKKWIAFQLLKALSQCHK-- 138 (1431)
T ss_pred chHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHh-hhhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 3444443333 445689999999888777788889999987 499999964 4568888889999999999999995
Q ss_pred CCCCeeecCCCCcc-----------------c--------c---ccccc----ccccCccccccCC----------C-cC
Q 040540 524 SSAPIIHCEGEDSV-----------------T--------Q---TTTMA----TIGYMAPEYGSEG----------I-VS 560 (669)
Q Consensus 524 ~~~~i~h~d~~~~~-----------------~--------~---~~~~g----t~~y~aPE~~~~~----------~-~~ 560 (669)
.+|+|+|+|... + + +.+.- -.-|.|||-+... . .+
T Consensus 139 --~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~ 216 (1431)
T KOG1240|consen 139 --LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLT 216 (1431)
T ss_pred --cCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccC
Confidence 489999999430 0 0 00111 1349999965331 1 46
Q ss_pred ccccchhhHHHHHHHHh-CCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccC
Q 040540 561 AKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCME 639 (669)
Q Consensus 561 ~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~ 639 (669)
++.||||.||+++|+++ |++||.-. ++..+-+.. ..+++..- ..-+.....+++..|++.
T Consensus 217 paMDIFS~GCViaELf~Eg~PlF~LS-----QL~aYr~~~-------~~~~e~~L-------e~Ied~~~Rnlil~Mi~r 277 (1431)
T KOG1240|consen 217 PAMDIFSAGCVIAELFLEGRPLFTLS-----QLLAYRSGN-------ADDPEQLL-------EKIEDVSLRNLILSMIQR 277 (1431)
T ss_pred hhhhhhhhhHHHHHHHhcCCCcccHH-----HHHhHhccC-------ccCHHHHH-------HhCcCccHHHHHHHHHcc
Confidence 78899999999999987 57776420 111110000 00000000 000111457889999999
Q ss_pred CCCCCCCHHHHHHHHHH
Q 040540 640 SPDKRMHMTDAAAKLKK 656 (669)
Q Consensus 640 ~P~~Rps~~~v~~~l~~ 656 (669)
||++|-++++.++.=++
T Consensus 278 dPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 278 DPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred CchhccCHHHHHHhhhc
Confidence 99999999999987443
No 442
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.88 E-value=2e-09 Score=122.28 Aligned_cols=129 Identities=26% Similarity=0.228 Sum_probs=86.7
Q ss_pred CCEEEEEcCCCCCcccccccccCCCCCCEEeCCCCc--CcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccc
Q 040540 51 QRVTALNLSDMGLGGTIPLHFGNLSFLVSLDISENN--FHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRIL 128 (669)
Q Consensus 51 ~~v~~L~ls~~~l~~~~~~~~~~l~~L~~L~Ls~N~--l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 128 (669)
..+++..+-++.+.... .+. ..+.|++|-+..|. +.......|..++.|++|||++|.--+.+|+.++.|.+||+|
T Consensus 523 ~~~rr~s~~~~~~~~~~-~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEHIA-GSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchhhcc-CCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 34566666666554222 221 22357778777775 443333446778888888888877666788888888888888
Q ss_pred cccccCccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCC
Q 040540 129 RLDYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCN 182 (669)
Q Consensus 129 ~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~ 182 (669)
+|+++.++ .+|..+.+|++|.+|++..+.....+|..+..|.+|++|.+....
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 88888877 677778888888888777766555556666667777777665443
No 443
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.87 E-value=5.7e-10 Score=101.43 Aligned_cols=57 Identities=26% Similarity=0.459 Sum_probs=8.4
Q ss_pred CCCEEeCCCCcCcccCCcccC-CCCCCCEEEccCCcCCccCCccccCCcccccccccccCcc
Q 040540 76 FLVSLDISENNFHGHLPKELG-QLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFT 136 (669)
Q Consensus 76 ~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 136 (669)
.+++|+|.+|.|+. + +.++ .+.+|+.|+|++|.+.. ++ .+..+++|++|++++|+++
T Consensus 20 ~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~ 77 (175)
T PF14580_consen 20 KLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS 77 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---
T ss_pred cccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC
Confidence 34444444444432 1 1222 23444444444444442 11 2333444444444444444
No 444
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.87 E-value=2.2e-09 Score=121.88 Aligned_cols=178 Identities=24% Similarity=0.326 Sum_probs=121.2
Q ss_pred CCEEEEEcCCCC--CcccccccccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccc
Q 040540 51 QRVTALNLSDMG--LGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRIL 128 (669)
Q Consensus 51 ~~v~~L~ls~~~--l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 128 (669)
..++.|=+.+|. +....+..|..++.|++|||++|.--+.+|..++.|.+||+|+|++..++ .+|..+++|.+|.+|
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~L 623 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYL 623 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhee
Confidence 457888888886 44333344788999999999999877899999999999999999999998 899999999999999
Q ss_pred cccccCccccCCcccCCCCCCCeeeccccc--ccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCC----EEEc
Q 040540 129 RLDYNNFTGPIPNSLFNLSRLEMLRAEFNI--IGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLK----NLDL 202 (669)
Q Consensus 129 ~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~--l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~----~L~l 202 (669)
|+..+.....+|.....|++|++|.+.... .+...-..+.+|.+|+.+....... .+-..+..+++|. .+.+
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~ 701 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSI 701 (889)
T ss_pred ccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhh
Confidence 999988776778888889999999986543 2222333445555565555533332 0111112222222 2222
Q ss_pred cCCCCCCCCCccccCCCCCcEEEcccCCCc
Q 040540 203 ADNKLSGLIPPTIFNISTMRILTLESNQLS 232 (669)
Q Consensus 203 ~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~ 232 (669)
.++.. ...+..+..+.+|+.|.+.++..+
T Consensus 702 ~~~~~-~~~~~~~~~l~~L~~L~i~~~~~~ 730 (889)
T KOG4658|consen 702 EGCSK-RTLISSLGSLGNLEELSILDCGIS 730 (889)
T ss_pred ccccc-ceeecccccccCcceEEEEcCCCc
Confidence 22121 123445566667777776666553
No 445
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.86 E-value=2.9e-10 Score=113.00 Aligned_cols=209 Identities=23% Similarity=0.270 Sum_probs=100.0
Q ss_pred CCCCCCEEeCCCCcCcccCC--cccCCCCCCCEEEccCCcCCccCC--ccccCCcccccccccccCccccCCcccCCCCC
Q 040540 73 NLSFLVSLDISENNFHGHLP--KELGQLRRLRVMSLAYNKLSGSFP--SWIGVLSKLRILRLDYNNFTGPIPNSLFNLSR 148 (669)
Q Consensus 73 ~l~~L~~L~Ls~N~l~~~~p--~~l~~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 148 (669)
++..|+...|.+..+.. .+ .....+++++.|||+.|-+....| .....|++|+.|+|+.|++.......
T Consensus 119 n~kkL~~IsLdn~~V~~-~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~------ 191 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVED-AGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSN------ 191 (505)
T ss_pred hHHhhhheeecCccccc-cchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCcccc------
Confidence 45555666666555431 22 234456666666666665543222 23345666666666666654211110
Q ss_pred CCeeecccccccccCCcccCCCCCCCEEEcccCCCccc-CCccccCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEcc
Q 040540 149 LEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQ-IPTEIGSLQNLKNLDLADNKLSGLIPPTIFNISTMRILTLE 227 (669)
Q Consensus 149 L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 227 (669)
.-..+.+|+.|.|+.|.++-. +-.....+++|+.|+|..|..-.........++.|+.|||+
T Consensus 192 -----------------~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs 254 (505)
T KOG3207|consen 192 -----------------TTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLS 254 (505)
T ss_pred -----------------chhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhcccc
Confidence 011234555555555555421 11112334555555555554222222233344555555555
Q ss_pred cCCCccccc--hhhhccCCCCCeeecccCcccccC-Ccc-----ccCCCCCCEEeCCCCCccccC-ccccCCCCCCCEEE
Q 040540 228 SNQLSGRLP--STIGHSLRNIEYLALSTNNLIGKI-PNS-----ITNATKLIGLDLGFNSFSGHI-PNTFGNLRHLSVLN 298 (669)
Q Consensus 228 ~n~l~~~~p--~~~~~~l~~L~~L~ls~n~l~~~~-p~~-----~~~l~~L~~L~ls~n~l~~~~-p~~~~~l~~L~~L~ 298 (669)
+|.+- .++ ...+ .++.|..|+++.+.+.... |+. ....++|++|+++.|.+...- -..+..+++|+.|.
T Consensus 255 ~N~li-~~~~~~~~~-~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~ 332 (505)
T KOG3207|consen 255 NNNLI-DFDQGYKVG-TLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLR 332 (505)
T ss_pred CCccc-ccccccccc-cccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhh
Confidence 55543 122 1111 3555555555555543221 111 133466777777777774321 12344556666677
Q ss_pred ccCCccccC
Q 040540 299 VMMNNLTTE 307 (669)
Q Consensus 299 l~~N~l~~~ 307 (669)
...|.+...
T Consensus 333 ~~~n~ln~e 341 (505)
T KOG3207|consen 333 ITLNYLNKE 341 (505)
T ss_pred ccccccccc
Confidence 666777654
No 446
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.85 E-value=5.5e-10 Score=105.52 Aligned_cols=104 Identities=23% Similarity=0.328 Sum_probs=51.5
Q ss_pred CCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEcccCCCccccchhhhccCCCCCee
Q 040540 170 LRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGLIPPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYL 249 (669)
Q Consensus 170 L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L 249 (669)
-..|+++||++|.++ .+-.++.-+++++.|++|.|.+... ..+..+++|+.||+++|.++ .+..+ ...+.++++|
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gw-h~KLGNIKtL 357 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGW-HLKLGNIKTL 357 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhh-HhhhcCEeee
Confidence 345555566666554 4444455555666666666665532 22455555566666666554 22211 1235556666
Q ss_pred ecccCcccccCCccccCCCCCCEEeCCCCCc
Q 040540 250 ALSTNNLIGKIPNSITNATKLIGLDLGFNSF 280 (669)
Q Consensus 250 ~ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l 280 (669)
.|+.|.+.. -..+..+-+|..||+++|++
T Consensus 358 ~La~N~iE~--LSGL~KLYSLvnLDl~~N~I 386 (490)
T KOG1259|consen 358 KLAQNKIET--LSGLRKLYSLVNLDLSSNQI 386 (490)
T ss_pred ehhhhhHhh--hhhhHhhhhheeccccccch
Confidence 666555431 12233344444455554444
No 447
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.84 E-value=1.2e-09 Score=119.98 Aligned_cols=113 Identities=19% Similarity=0.194 Sum_probs=80.4
Q ss_pred HhhhhhhhcCCCCCCeeecCCCCc----------------------------------------ccccccccccccCccc
Q 040540 513 GSALEYLRHGHSSAPIIHCEGEDS----------------------------------------VTQTTTMATIGYMAPE 552 (669)
Q Consensus 513 ~~~l~~lh~~~~~~~i~h~d~~~~----------------------------------------~~~~~~~gt~~y~aPE 552 (669)
+.+++|+|+ .+|+|||.|+. ......+||+.|.|||
T Consensus 153 vla~Eylh~----ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPe 228 (1205)
T KOG0606|consen 153 VLAVEYLHS----YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPE 228 (1205)
T ss_pred hHHhHhhcc----CCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChh
Confidence 678999994 58999998843 1122336999999999
Q ss_pred cccCCCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHH
Q 040540 553 YGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDL 632 (669)
Q Consensus 553 ~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 632 (669)
++....|+..+|+|++|+|+||.+.|+.||+....++. +...+...+. +.+ .......++.++
T Consensus 229 VilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel-fg~visd~i~--wpE--------------~dea~p~Ea~dl 291 (1205)
T KOG0606|consen 229 VILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL-FGQVISDDIE--WPE--------------EDEALPPEAQDL 291 (1205)
T ss_pred hhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH-Hhhhhhhhcc--ccc--------------cCcCCCHHHHHH
Confidence 99999999999999999999999999999986422211 1222211110 000 011233467899
Q ss_pred HhhcccCCCCCCCC
Q 040540 633 ALDCCMESPDKRMH 646 (669)
Q Consensus 633 ~~~c~~~~P~~Rps 646 (669)
+.+.+..+|.+|--
T Consensus 292 i~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 292 IEQLLRQNPLCRLG 305 (1205)
T ss_pred HHHHHHhChHhhcc
Confidence 99999999999963
No 448
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.83 E-value=4.5e-10 Score=111.66 Aligned_cols=212 Identities=25% Similarity=0.276 Sum_probs=135.5
Q ss_pred CCCCCCEEEccCCcCCccCC--ccccCCcccccccccccCccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCC
Q 040540 97 QLRRLRVMSLAYNKLSGSFP--SWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLV 174 (669)
Q Consensus 97 ~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~ 174 (669)
++.+|+...|.+.... ..+ .....+++++.|||++|-|+.-. .+-.....|++|+
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~----------------------~v~~i~eqLp~Le 175 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWF----------------------PVLKIAEQLPSLE 175 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHH----------------------HHHHHHHhcccch
Confidence 5666777777666654 222 24556666677777666655211 1112334566666
Q ss_pred EEEcccCCCcccCCcc-ccCCCCCCEEEccCCCCCCC-CCccccCCCCCcEEEcccCCCccccchhhhccCCCCCeeecc
Q 040540 175 NLGLWSCNLQGQIPTE-IGSLQNLKNLDLADNKLSGL-IPPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALS 252 (669)
Q Consensus 175 ~L~l~~n~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls 252 (669)
.|+++.|++.-..... -..+++|+.|.|+.|.++-. +-.....+++|+.|.+..|...+..-.. ...+..|+.|||+
T Consensus 176 ~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~-~~i~~~L~~LdLs 254 (505)
T KOG3207|consen 176 NLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATS-TKILQTLQELDLS 254 (505)
T ss_pred hcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecch-hhhhhHHhhcccc
Confidence 7777777664222111 12567899999999999732 2223456889999999999522111111 1246789999999
Q ss_pred cCcccccCC-ccccCCCCCCEEeCCCCCcccc-Cccc-----cCCCCCCCEEEccCCccccCCCCCcccccccccCCCCC
Q 040540 253 TNNLIGKIP-NSITNATKLIGLDLGFNSFSGH-IPNT-----FGNLRHLSVLNVMMNNLTTESSSADQWSFLSSLTNCRN 325 (669)
Q Consensus 253 ~n~l~~~~p-~~~~~l~~L~~L~ls~n~l~~~-~p~~-----~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~l~~ 325 (669)
+|++....- .....++.|..|+++.+.+... .|+. ....++|++|++..|++... ..+..+..+.+
T Consensus 255 ~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w-------~sl~~l~~l~n 327 (505)
T KOG3207|consen 255 NNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDW-------RSLNHLRTLEN 327 (505)
T ss_pred CCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccc-------cccchhhccch
Confidence 999864321 3456778899999998887643 2222 35678999999999988653 34455666788
Q ss_pred CCEEECcCCCCccc
Q 040540 326 LSNLALASNPLGGI 339 (669)
Q Consensus 326 L~~L~l~~n~l~~~ 339 (669)
|+.|.+..|++...
T Consensus 328 lk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 328 LKHLRITLNYLNKE 341 (505)
T ss_pred hhhhhccccccccc
Confidence 88888888877643
No 449
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.82 E-value=7.7e-10 Score=104.51 Aligned_cols=207 Identities=20% Similarity=0.174 Sum_probs=116.5
Q ss_pred ccccccccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCc---cCCccccCCccccccccc-ccCccccCC
Q 040540 65 GTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSG---SFPSWIGVLSKLRILRLD-YNNFTGPIP 140 (669)
Q Consensus 65 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~---~~p~~~~~l~~L~~L~L~-~n~l~~~~p 140 (669)
..+|-.+.-+.+|+++.+|.+.-.. +-+....-+.|+++.+.+..++. .+|. ..+..+.-+ ..-.+|..-
T Consensus 204 ~~l~f~l~~f~~l~~~~~s~~~~~~-i~~~~~~kptl~t~~v~~s~~~~~~~l~pe-----~~~~D~~~~E~~t~~G~~~ 277 (490)
T KOG1259|consen 204 NRLSFNLNAFRNLKTLKFSALSTEN-IVDIELLKPTLQTICVHNTTIQDVPSLLPE-----TILADPSGSEPSTSNGSAL 277 (490)
T ss_pred cccccchHHhhhhheeeeeccchhh-eeceeecCchhheeeeecccccccccccch-----hhhcCccCCCCCccCCceE
Confidence 3345556667788888888875331 22222233567777776665431 1221 111111111 111223333
Q ss_pred cccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCCCCCccccCCCC
Q 040540 141 NSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGLIPPTIFNIST 220 (669)
Q Consensus 141 ~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 220 (669)
..+...+.|+++|+++|.++ .+..++.-++.++.|+++.|.++.. ..+..+++|+.||||+|.++.. -.+-.++.+
T Consensus 278 ~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~~-~Gwh~KLGN 353 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAEC-VGWHLKLGN 353 (490)
T ss_pred EecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHhh-hhhHhhhcC
Confidence 34444556666666666665 3445555566777777777776532 2266677777777777777632 233345667
Q ss_pred CcEEEcccCCCccccchhhhccCCCCCeeecccCcccccC-CccccCCCCCCEEeCCCCCccccC
Q 040540 221 MRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNLIGKI-PNSITNATKLIGLDLGFNSFSGHI 284 (669)
Q Consensus 221 L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l~~~~-p~~~~~l~~L~~L~ls~n~l~~~~ 284 (669)
++.|.++.|.+.. -..+. .+-+|.+||+++|++...- -..+++++-|..+.|-+|.+.+.+
T Consensus 354 IKtL~La~N~iE~--LSGL~-KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 354 IKTLKLAQNKIET--LSGLR-KLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred EeeeehhhhhHhh--hhhhH-hhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 7777777776531 12222 4556777788877765321 245677788888888888877543
No 450
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.81 E-value=4.9e-10 Score=108.46 Aligned_cols=241 Identities=19% Similarity=0.205 Sum_probs=132.8
Q ss_pred CCEEEEEcCCCCCccc----ccccccCCCCCCEEeCCCCcCcc----cCCcc-------cCCCCCCCEEEccCCcCCccC
Q 040540 51 QRVTALNLSDMGLGGT----IPLHFGNLSFLVSLDISENNFHG----HLPKE-------LGQLRRLRVMSLAYNKLSGSF 115 (669)
Q Consensus 51 ~~v~~L~ls~~~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~----~~p~~-------l~~l~~L~~L~L~~n~l~~~~ 115 (669)
..++.++||+|.++.. +...+.+.++|+..++|+- ++| .+|.. +-..++|++||||.|-+....
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 4678899999988643 3345677778888888863 333 33433 335568888888888876433
Q ss_pred C----ccccCCcccccccccccCccccCCc-ccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCccc----
Q 040540 116 P----SWIGVLSKLRILRLDYNNFTGPIPN-SLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQ---- 186 (669)
Q Consensus 116 p----~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~---- 186 (669)
+ +-+.+...|++|.|.+|.+. +..+ .++. .|..|. . -..+++-++|+++....|++-..
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg-~~ag~~l~~--al~~l~--~-------~kk~~~~~~Lrv~i~~rNrlen~ga~~ 176 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLG-PEAGGRLGR--ALFELA--V-------NKKAASKPKLRVFICGRNRLENGGATA 176 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCC-hhHHHHHHH--HHHHHH--H-------HhccCCCcceEEEEeeccccccccHHH
Confidence 3 33456778888888888775 1111 1110 000000 0 01122334555555555554321
Q ss_pred CCccccCCCCCCEEEccCCCCCC----CCCccccCCCCCcEEEcccCCCcccc----chhhhccCCCCCeeecccCcccc
Q 040540 187 IPTEIGSLQNLKNLDLADNKLSG----LIPPTIFNISTMRILTLESNQLSGRL----PSTIGHSLRNIEYLALSTNNLIG 258 (669)
Q Consensus 187 ~p~~~~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~n~l~~~~----p~~~~~~l~~L~~L~ls~n~l~~ 258 (669)
+-..|...+.|+.+.++.|.+.. .+...+..+++|++||++.|.++..- ...+ ..+++|+.|++++|.+..
T Consensus 177 ~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL-~s~~~L~El~l~dcll~~ 255 (382)
T KOG1909|consen 177 LAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKAL-SSWPHLRELNLGDCLLEN 255 (382)
T ss_pred HHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHh-cccchheeeccccccccc
Confidence 11223334555666666655531 12233455666666666666654221 1111 245567777777776654
Q ss_pred cCCccc-----cCCCCCCEEeCCCCCcccc----CccccCCCCCCCEEEccCCccc
Q 040540 259 KIPNSI-----TNATKLIGLDLGFNSFSGH----IPNTFGNLRHLSVLNVMMNNLT 305 (669)
Q Consensus 259 ~~p~~~-----~~l~~L~~L~ls~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 305 (669)
.-..++ ...++|+.+.+.+|.++.. +-..+...+.|..|+|++|.+.
T Consensus 256 ~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 256 EGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred ccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 332222 2246777777777776532 2223455777888888888874
No 451
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.80 E-value=4.9e-09 Score=95.36 Aligned_cols=65 Identities=29% Similarity=0.467 Sum_probs=20.8
Q ss_pred cCCCCCCCEEEcccCCCcccCCccc-cCCCCCCEEEccCCCCCCCC-CccccCCCCCcEEEcccCCCc
Q 040540 167 IGNLRKLVNLGLWSCNLQGQIPTEI-GSLQNLKNLDLADNKLSGLI-PPTIFNISTMRILTLESNQLS 232 (669)
Q Consensus 167 ~~~L~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~l~~n~l~ 232 (669)
+..+++|++|++++|+++. ++..+ ..+++|++|++++|++...- -..+..+++|+.|++.+|.++
T Consensus 60 l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 60 LPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp ----TT--EEE--SS---S--CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred ccChhhhhhcccCCCCCCc-cccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 4445556666666666653 22222 24566666666666665321 123445566666666666554
No 452
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.79 E-value=2.5e-09 Score=79.77 Aligned_cols=59 Identities=34% Similarity=0.448 Sum_probs=30.5
Q ss_pred CCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccccccccC
Q 040540 76 FLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNN 134 (669)
Q Consensus 76 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 134 (669)
+|++|++++|+++...+..|..+++|++|++++|.+....|+.|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 44555555555554444445555555555555555554444455555555555555554
No 453
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.73 E-value=1e-09 Score=116.62 Aligned_cols=129 Identities=26% Similarity=0.347 Sum_probs=64.2
Q ss_pred CCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccccccccCccccCCcccCCCCCCCee
Q 040540 73 NLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLEML 152 (669)
Q Consensus 73 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 152 (669)
.+..++.+++..|.+.. +-..+..+++|..|++.+|+|.. +...+..+++|++|+|++|.|+... .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 44555666666666542 22335566666666666666653 2222555666666666666665322 23344445555
Q ss_pred ecccccccccCCcccCCCCCCCEEEcccCCCcccCC-ccccCCCCCCEEEccCCCCC
Q 040540 153 RAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIP-TEIGSLQNLKNLDLADNKLS 208 (669)
Q Consensus 153 ~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~ 208 (669)
++++|.+... ..+..+.+|+.+++++|.+...-+ . ...+.+++.+++.+|.+.
T Consensus 146 ~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 146 NLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR 199 (414)
T ss_pred eeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh
Confidence 5555554321 223334444555555555443222 1 233444444444444443
No 454
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.72 E-value=7.8e-09 Score=77.13 Aligned_cols=60 Identities=32% Similarity=0.370 Sum_probs=42.4
Q ss_pred CCCCEEEccCCcCCccCCccccCCcccccccccccCccccCCcccCCCCCCCeeeccccc
Q 040540 99 RRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLEMLRAEFNI 158 (669)
Q Consensus 99 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~ 158 (669)
++|++|++++|++....++.|.++++|++|++++|.++...|..|.++++|++|++++|+
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 356777777777775555677777777777777777776666666777777777666664
No 455
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.66 E-value=2.8e-09 Score=113.34 Aligned_cols=197 Identities=25% Similarity=0.319 Sum_probs=94.7
Q ss_pred CCCCCCEEEccCCcCCccCCccccCCcccccccccccCccccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEE
Q 040540 97 QLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNL 176 (669)
Q Consensus 97 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L 176 (669)
.+..++.++++.|.+.. +-..+..+.+|+.|++.+|++.. +...+..+++|++|++++|.++... .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 34445555555565542 22335555666666666666652 2222555666666666666665332 24445556666
Q ss_pred EcccCCCcccCCccccCCCCCCEEEccCCCCCCCCC-ccccCCCCCcEEEcccCCCccccchhhhccCCCCCeeecccCc
Q 040540 177 GLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGLIP-PTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNN 255 (669)
Q Consensus 177 ~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~ 255 (669)
++++|.++.. ..+..++.|+.+++++|.++..-+ . ...+.+++.+.+.+|.+.. + ..+. .+..+..+++..|.
T Consensus 146 ~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~-i-~~~~-~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 146 NLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE-I-EGLD-LLKKLVLLSLLDNK 219 (414)
T ss_pred eeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc-c-cchH-HHHHHHHhhccccc
Confidence 6666666422 223445566666666666654433 1 3455555666666665531 1 1111 12233333444454
Q ss_pred ccccCCccccCCC--CCCEEeCCCCCccccCccccCCCCCCCEEEccCCcccc
Q 040540 256 LIGKIPNSITNAT--KLIGLDLGFNSFSGHIPNTFGNLRHLSVLNVMMNNLTT 306 (669)
Q Consensus 256 l~~~~p~~~~~l~--~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 306 (669)
+...-+ +..+. .|+.+++++|.+.. ++..+..+..+..|++..|++..
T Consensus 220 i~~~~~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~ 269 (414)
T KOG0531|consen 220 ISKLEG--LNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISN 269 (414)
T ss_pred ceeccC--cccchhHHHHHHhcccCcccc-ccccccccccccccchhhccccc
Confidence 432211 11111 24555555555542 21334445555555555555443
No 456
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.65 E-value=1.7e-09 Score=104.78 Aligned_cols=252 Identities=22% Similarity=0.281 Sum_probs=155.2
Q ss_pred ccccCCCCCCEEeCCCCcCccc----CCcccCCCCCCCEEEccCCcCCc----cCCccc-------cCCccccccccccc
Q 040540 69 LHFGNLSFLVSLDISENNFHGH----LPKELGQLRRLRVMSLAYNKLSG----SFPSWI-------GVLSKLRILRLDYN 133 (669)
Q Consensus 69 ~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~n~l~~----~~p~~~-------~~l~~L~~L~L~~n 133 (669)
+.+..+..++.|+||+|.+... +...+.+.++|+.-++++- ++| .+|+.+ ...++|++||||+|
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDN 102 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDN 102 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeecccc
Confidence 4566788899999999988532 3445667778888887642 233 334332 22346666666666
Q ss_pred CccccCCcc----cCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCC
Q 040540 134 NFTGPIPNS----LFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSG 209 (669)
Q Consensus 134 ~l~~~~p~~----~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 209 (669)
-|.-.-+.. +.+...|+.|.+.+|-++..-...++. .|..|. .++ -.+.-++|+.+...+|++..
T Consensus 103 A~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen 171 (382)
T KOG1909|consen 103 AFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAASKPKLRVFICGRNRLEN 171 (382)
T ss_pred ccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCCCcceEEEEeecccccc
Confidence 664322222 233445555555554443111111110 111111 111 12344689999999999864
Q ss_pred C----CCccccCCCCCcEEEcccCCCccc----cchhhhccCCCCCeeecccCccccc----CCccccCCCCCCEEeCCC
Q 040540 210 L----IPPTIFNISTMRILTLESNQLSGR----LPSTIGHSLRNIEYLALSTNNLIGK----IPNSITNATKLIGLDLGF 277 (669)
Q Consensus 210 ~----~p~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~~l~~L~~L~ls~n~l~~~----~p~~~~~l~~L~~L~ls~ 277 (669)
. +...|...+.|+.+.++.|.+.-. +-..+. ..++|+.|||.+|-++.. +...+..++.|+.+++++
T Consensus 172 ~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~-~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~d 250 (382)
T KOG1909|consen 172 GGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALE-HCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGD 250 (382)
T ss_pred ccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHH-hCCcceeeecccchhhhHHHHHHHHHhcccchheeecccc
Confidence 3 233466678999999999987411 112233 578999999999988743 234566778999999999
Q ss_pred CCccccCc----ccc-CCCCCCCEEEccCCccccCCCCCcccccccccCCCCCCCEEECcCCCCc
Q 040540 278 NSFSGHIP----NTF-GNLRHLSVLNVMMNNLTTESSSADQWSFLSSLTNCRNLSNLALASNPLG 337 (669)
Q Consensus 278 n~l~~~~p----~~~-~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~ 337 (669)
|.+...-. ..+ ...++|++|.+.+|.++..... ....++...+.|..|++++|.+.
T Consensus 251 cll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~----~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 251 CLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAAL----ALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cccccccHHHHHHHHhccCCCCceeccCcchhHHHHHH----HHHHHHhcchhhHHhcCCccccc
Confidence 98864322 223 3468999999999988754211 12233455789999999999994
No 457
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=98.63 E-value=2.8e-07 Score=94.70 Aligned_cols=192 Identities=16% Similarity=0.104 Sum_probs=130.7
Q ss_pred Cchhhhhhcccc----ccccceecccc-ccccccceeeccCCCCChHHhhhcCC-CccCHHHHHHHHHhHHhhhhhhhcC
Q 040540 449 FDSECEVLRNVR----HRNLIKIISSC-SNPDFKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLRHG 522 (669)
Q Consensus 449 ~~~e~~~l~~l~----h~niv~l~~~~-~~~~~~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~ 522 (669)
+..|..++..+. .+++..+++.. ....+.++||+.. +.+|.++.+... ..++..+...|+.|+..+|+++|.
T Consensus 63 l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~- 140 (322)
T KOG1164|consen 63 LKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHS- 140 (322)
T ss_pred chhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHh-
Confidence 344666666554 24666777766 4677889999976 579999875543 568889999999999999999994
Q ss_pred CCCCCeeecCCCCcc-------------------------c---------------ccccccccccCccccccCCCcCcc
Q 040540 523 HSSAPIIHCEGEDSV-------------------------T---------------QTTTMATIGYMAPEYGSEGIVSAK 562 (669)
Q Consensus 523 ~~~~~i~h~d~~~~~-------------------------~---------------~~~~~gt~~y~aPE~~~~~~~~~~ 562 (669)
.+++|||+|+.. . .....||..|+++....+...+.+
T Consensus 141 ---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~ 217 (322)
T KOG1164|consen 141 ---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRR 217 (322)
T ss_pred ---cCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCc
Confidence 489999998420 0 011238999999999988889999
Q ss_pred ccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCC
Q 040540 563 CDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPD 642 (669)
Q Consensus 563 ~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~ 642 (669)
.|+||.+-++.|+..|..||........ ............... . ....+..+.++...+-..+..
T Consensus 218 DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~~~~~~~~-----~---------~~~~~~~~~~~~~~~~~~~~~ 282 (322)
T KOG1164|consen 218 DDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDPRKLLTDR-----F---------GDLKPEEFAKILEYIDSLDYE 282 (322)
T ss_pred hhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHhhhhcccc-----c---------cCCChHHHHHHHHHhhccCCc
Confidence 9999999999999999999965322111 111111100000000 0 011122334445545558899
Q ss_pred CCCCHHHHHHHHHHhHHH
Q 040540 643 KRMHMTDAAAKLKKIKVK 660 (669)
Q Consensus 643 ~Rps~~~v~~~l~~~~~~ 660 (669)
++|....+...+++....
T Consensus 283 ~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 283 DKPDYEKLAELLKDVFDS 300 (322)
T ss_pred CCCCHHHHHHHHHHHHHh
Confidence 999999999988877554
No 458
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=98.54 E-value=6.9e-08 Score=94.74 Aligned_cols=138 Identities=14% Similarity=0.168 Sum_probs=86.7
Q ss_pred ceeeccCCCCChHHhhhc---CC---CccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCccc-------------
Q 040540 478 ALVLEFMPNGSLEKWLYS---HN---YFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSVT------------- 538 (669)
Q Consensus 478 ~lv~ey~~~g~L~~~l~~---~~---~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~~~------------- 538 (669)
+++|+-+. ++|.+++.. .. ..+....+..+..|+.+.+++||+. +++|.|++....
T Consensus 115 ~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~----GlVHgdi~~~nfll~~~G~v~Lg~F 189 (288)
T PF14531_consen 115 FLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY----GLVHGDIKPENFLLDQDGGVFLGDF 189 (288)
T ss_dssp EEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT----TEEEST-SGGGEEE-TTS-EEE--G
T ss_pred hhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc----ceEecccceeeEEEcCCCCEEEcCh
Confidence 45666664 688777542 11 2344556778889999999999964 799999995410
Q ss_pred ---------ccccccccccCccccccC--------CCcCccccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCC
Q 040540 539 ---------QTTTMATIGYMAPEYGSE--------GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLP 601 (669)
Q Consensus 539 ---------~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~ 601 (669)
......+..|.+||.... ..++.+.|.|++|+++|.|.+|+.||.....+..
T Consensus 190 ~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~----------- 258 (288)
T PF14531_consen 190 SSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEAD----------- 258 (288)
T ss_dssp GGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGST-----------
T ss_pred HHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCcccc-----------
Confidence 000224567889997643 2478899999999999999999999975422111
Q ss_pred CCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCC
Q 040540 602 HRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKR 644 (669)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~R 644 (669)
.+..+..+ . +.++.+.+++...++.+|.+|
T Consensus 259 ------~~~~f~~C------~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 259 ------PEWDFSRC------R-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp ------SGGGGTTS------S----HHHHHHHHHHT-SSGGGS
T ss_pred ------ccccchhc------C-CcCHHHHHHHHHHccCCcccC
Confidence 00012121 3 566778999999999999988
No 459
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.54 E-value=2.5e-08 Score=109.36 Aligned_cols=182 Identities=20% Similarity=0.216 Sum_probs=131.3
Q ss_pred hhhhhcccc-ccccceeccccccccccceeeccCCCCChHHhh-hcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCee
Q 040540 452 ECEVLRNVR-HRNLIKIISSCSNPDFKALVLEFMPNGSLEKWL-YSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPII 529 (669)
Q Consensus 452 e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l-~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~ 529 (669)
|..+-..+. |+|++..++....++..+++.+|..+|++++.+ .......+......+..+...|+.|+|- ..++.
T Consensus 70 e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~---~~~~~ 146 (601)
T KOG0590|consen 70 ETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP---ENGVT 146 (601)
T ss_pred cccccccccccccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCc---ccccc
Confidence 444444444 999999999999999999999999999999999 5433245666677789999999999992 24688
Q ss_pred ecCCCCcc-----------------------------ccccccc-ccccCccccccCC-CcCccccchhhHHHHHHHHhC
Q 040540 530 HCEGEDSV-----------------------------TQTTTMA-TIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTR 578 (669)
Q Consensus 530 h~d~~~~~-----------------------------~~~~~~g-t~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg 578 (669)
|+|+++.. .....+| ++.|+|||...+. ..+...|+||.|+++.-+++|
T Consensus 147 h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g 226 (601)
T KOG0590|consen 147 HRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTG 226 (601)
T ss_pred cCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccC
Confidence 88887430 0011247 9999999998884 567889999999999999999
Q ss_pred CCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCCCCCCHHHHH
Q 040540 579 KRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPDKRMHMTDAA 651 (669)
Q Consensus 579 ~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~~Rps~~~v~ 651 (669)
..|++...........|...... . ....+........++..+++..+|..|.+.+++.
T Consensus 227 ~~p~~~~~~~~~~~~~~~~~~~~--~-------------~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 227 ELPWDFPSRKDGRYSSWKSNKGR--F-------------TQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred CCCccccccccccceeecccccc--c-------------ccCccccCChhhhhcccccccCCchhcccccccc
Confidence 99997654444333333322100 0 0011334445567888889999999999887764
No 460
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.33 E-value=4.5e-07 Score=100.22 Aligned_cols=168 Identities=18% Similarity=0.161 Sum_probs=110.9
Q ss_pred ccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCc--
Q 040540 459 VRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS-- 536 (669)
Q Consensus 459 l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~-- 536 (669)
.++|.++.....+......+++++|..++++...++..+..-....| .....+.++.+|||.. .+.|+|.++.
T Consensus 861 p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaR-s~i~~~vqs~e~L~s~----~r~h~~~~p~~~ 935 (1205)
T KOG0606|consen 861 PRSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPAR-SPILERVQSLESLHSS----LRKHRDLKPDSL 935 (1205)
T ss_pred CCCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCccccccc-chhHHHHhhhhccccc----hhhcccccccch
Confidence 34566665555534455668999999999999999875532233334 3445577889999843 3677765510
Q ss_pred -------------------------------------------------cc-----ccccccccccCccccccCCCcCcc
Q 040540 537 -------------------------------------------------VT-----QTTTMATIGYMAPEYGSEGIVSAK 562 (669)
Q Consensus 537 -------------------------------------------------~~-----~~~~~gt~~y~aPE~~~~~~~~~~ 562 (669)
.. .....||+.|.|||...+..++..
T Consensus 936 l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ 1015 (1205)
T KOG0606|consen 936 LIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSA 1015 (1205)
T ss_pred hhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCc
Confidence 00 122358999999999999999999
Q ss_pred ccchhhHHHHHHHHhCCCCCCcCCCCCccHHHHHHHhCCCCccccccccccchhhhhhhhHHHHHHHHHHHhhcccCCCC
Q 040540 563 CDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHRLSEVVDTNLVREEQAFSAKMDCLLSIMDLALDCCMESPD 642 (669)
Q Consensus 563 ~Dv~s~Gvil~el~tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~P~ 642 (669)
+|+|++|++++|.++|.+||.....+... +.+ ....-+... .+......+++++.+-+..+|.
T Consensus 1016 ad~~~~g~~l~e~l~g~pp~na~tpq~~f------~ni----~~~~~~~p~-------g~~~~s~~aq~~~~~ll~~~~~ 1078 (1205)
T KOG0606|consen 1016 ADWWSSGVCLFEVLTGIPPFNAETPQQIF------ENI----LNRDIPWPE-------GPEEGSYEAQDLINRLLTEEPT 1078 (1205)
T ss_pred chhhhhhhhhhhhhcCCCCCCCcchhhhh------hcc----ccCCCCCCC-------CccccChhhhhhhhhhhccCch
Confidence 99999999999999999999764332210 000 000000000 1234455678888888999999
Q ss_pred CCCCHH
Q 040540 643 KRMHMT 648 (669)
Q Consensus 643 ~Rps~~ 648 (669)
+|-.|.
T Consensus 1079 qr~~a~ 1084 (1205)
T KOG0606|consen 1079 QRLGAK 1084 (1205)
T ss_pred hccCcc
Confidence 997654
No 461
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.27 E-value=7.4e-07 Score=91.58 Aligned_cols=75 Identities=17% Similarity=0.100 Sum_probs=56.6
Q ss_pred ccCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 447 RSFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 447 ~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+.+.+|+.++..++|+++++.+..+ ...++||||+++++|... .. .. ...++.++++|+.|+|. .
T Consensus 66 ~~~~~E~~iL~~L~h~~iv~~l~~~---~~~~LVmE~~~G~~L~~~-~~----~~---~~~~~~~i~~aL~~lH~----~ 130 (365)
T PRK09188 66 HLAAREIRALKTVRGIGVVPQLLAT---GKDGLVRGWTEGVPLHLA-RP----HG---DPAWFRSAHRALRDLHR----A 130 (365)
T ss_pred HHHHHHHHHHHhccCCCCCcEEEEc---CCcEEEEEccCCCCHHHh-Cc----cc---hHHHHHHHHHHHHHHHH----C
Confidence 3577899999999999998533222 346899999999999732 11 11 14678899999999994 5
Q ss_pred CeeecCC-CCc
Q 040540 527 PIIHCEG-EDS 536 (669)
Q Consensus 527 ~i~h~d~-~~~ 536 (669)
+|+|||+ |+.
T Consensus 131 gIiHrDL~KP~ 141 (365)
T PRK09188 131 GITHNDLAKPQ 141 (365)
T ss_pred CCeeCCCCCcc
Confidence 8999999 753
No 462
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.26 E-value=1e-06 Score=59.95 Aligned_cols=39 Identities=36% Similarity=0.773 Sum_probs=28.4
Q ss_pred hhhHHHHHHHHhhcCC-CcccccCCCCCC--CCCCCccceeeC
Q 040540 8 TTDQSSLLAFKAHAFD-YRSALANNWSIS--YPICSWAGISCG 47 (669)
Q Consensus 8 ~~~~~~l~~~~~~~~~-~~~~l~~~w~~~--~~~c~~~g~~c~ 47 (669)
+.|++||++||.++.+ +...+.+ |+.. .++|.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~-W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSS-WNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT---TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCccccc-CCCcCCCCCeeeccEEeC
Confidence 5789999999999975 5556665 9987 689999999995
No 463
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.12 E-value=6.1e-08 Score=102.34 Aligned_cols=125 Identities=30% Similarity=0.404 Sum_probs=70.7
Q ss_pred CCCEEEccCCcCCccCCccccCCcccccccccccCccccCCcccCCCCCCCeeecccccccccCCc-ccCCCCCCCEEEc
Q 040540 100 RLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIPS-RIGNLRKLVNLGL 178 (669)
Q Consensus 100 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~L~~L~~L~l 178 (669)
+|.+.+.++|.+. ....++.-++.|+.|||++|+++.. +.+..+++|+.||+++|.+.- +|. ..... +|+.|.+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~-vp~l~~~gc-~L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRH-VPQLSMVGC-KLQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhcc-ccccchhhh-hheeeee
Confidence 3555566666665 4455566666777777777776632 245566667777777776652 222 11122 3666666
Q ss_pred ccCCCcccCCccccCCCCCCEEEccCCCCCCCC-CccccCCCCCcEEEcccCCC
Q 040540 179 WSCNLQGQIPTEIGSLQNLKNLDLADNKLSGLI-PPTIFNISTMRILTLESNQL 231 (669)
Q Consensus 179 ~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~l~~n~l 231 (669)
++|.++... .+.+|.+|+.||+++|-+.+.- -..++.+..|..|+|.+|.+
T Consensus 240 rnN~l~tL~--gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 240 RNNALTTLR--GIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred cccHHHhhh--hHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 666665332 3556666777777777665421 11234455566666666665
No 464
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.12 E-value=8.9e-08 Score=101.16 Aligned_cols=179 Identities=26% Similarity=0.237 Sum_probs=115.4
Q ss_pred cccccCCCCCCEEeCCCCcCcccCCcccCCC-CCCCEEEccCCcCC----------ccCCccccCCcccccccccccCcc
Q 040540 68 PLHFGNLSFLVSLDISENNFHGHLPKELGQL-RRLRVMSLAYNKLS----------GSFPSWIGVLSKLRILRLDYNNFT 136 (669)
Q Consensus 68 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~L~~n~l~----------~~~p~~~~~l~~L~~L~L~~n~l~ 136 (669)
|-++..+..|++|.|.++.+.. ..+ +..+ .+|+.|.= +|.+. |.+-..+ ....|.+.+.+.|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~-~~G-L~~lr~qLe~LIC-~~Sl~Al~~v~ascggd~~ns~-~Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST-AKG-LQELRHQLEKLIC-HNSLDALRHVFASCGGDISNSP-VWNKLATASFSYNRLV 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh-hhh-hHHHHHhhhhhhh-hccHHHHHHHHHHhccccccch-hhhhHhhhhcchhhHH
Confidence 4467788888888888887753 111 1111 12333321 12111 1111111 1246788888888886
Q ss_pred ccCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccCCccccCCCCCCEEEccCCCCCCCCCcccc
Q 040540 137 GPIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTEIGSLQNLKNLDLADNKLSGLIPPTIF 216 (669)
Q Consensus 137 ~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 216 (669)
.+..++.-++.|+.|+|+.|++...- .+..+.+|++|||++|.++....-....+ +|..|.+++|.++.. ..+.
T Consensus 178 -~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lrnN~l~tL--~gie 251 (1096)
T KOG1859|consen 178 -LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLRNNALTTL--RGIE 251 (1096)
T ss_pred -hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhh-hheeeeecccHHHhh--hhHH
Confidence 56667778888999999999887543 67888899999999999874332222333 388899999988754 4577
Q ss_pred CCCCCcEEEcccCCCccccchhhhccCCCCCeeecccCcc
Q 040540 217 NISTMRILTLESNQLSGRLPSTIGHSLRNIEYLALSTNNL 256 (669)
Q Consensus 217 ~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~ls~n~l 256 (669)
++.+|+.||+++|-+.+.---.+...+..|..|.|.+|.+
T Consensus 252 ~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred hhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 8889999999999876532211111356677788888765
No 465
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=98.11 E-value=6.8e-07 Score=85.13 Aligned_cols=114 Identities=10% Similarity=0.113 Sum_probs=77.8
Q ss_pred Cchhhhhhccccccccceecccccc--------ccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhh
Q 040540 449 FDSECEVLRNVRHRNLIKIISSCSN--------PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLR 520 (669)
Q Consensus 449 ~~~e~~~l~~l~h~niv~l~~~~~~--------~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh 520 (669)
+.+|+..+.++.|+++..+..+... ....+++|||++|.+|.++.. .+. ....+++.++..+|
T Consensus 82 ~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH 152 (232)
T PRK10359 82 YENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLH 152 (232)
T ss_pred HHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHH
Confidence 4678888999999999988776432 235789999999999988742 221 24568899999999
Q ss_pred cCCCCCCeeecCCCCccccccc-------c-cccccCccc----cccCCCcCccccchhhHHHHHHH
Q 040540 521 HGHSSAPIIHCEGEDSVTQTTT-------M-ATIGYMAPE----YGSEGIVSAKCDVYSYGVLLMET 575 (669)
Q Consensus 521 ~~~~~~~i~h~d~~~~~~~~~~-------~-gt~~y~aPE----~~~~~~~~~~~Dv~s~Gvil~el 575 (669)
. .+++|+|++++....+. . ++..+..+. +...+.|..++|+|||||++.-.
T Consensus 153 ~----~gi~H~Dikp~Nili~~~gi~liDfg~~~~~~e~~a~d~~vler~y~~~~di~~lg~~~~~~ 215 (232)
T PRK10359 153 Q----HGMVSGDPHKGNFIVSKNGLRIIDLSGKRCTAQRKAKDRIDLERHYGIKNEIKDLGYYLLIY 215 (232)
T ss_pred H----cCCccCCCChHHEEEeCCCEEEEECCCcccccchhhHHHHHHHhHhcccccccceeEeehHH
Confidence 5 48999999976321111 1 121121111 23345577899999999987654
No 466
>PRK12274 serine/threonine protein kinase; Provisional
Probab=98.07 E-value=4.2e-06 Score=78.02 Aligned_cols=122 Identities=13% Similarity=0.056 Sum_probs=83.3
Q ss_pred cCchhhhhhccccc-cccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 448 SFDSECEVLRNVRH-RNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 448 ~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
-+..|+.++.++.| +++..++++ ...+++|||+.+.+|.+.+.. ....++.++.++++++|. .
T Consensus 47 l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~----~ 110 (218)
T PRK12274 47 LARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHR----C 110 (218)
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHH----C
Confidence 35679999999954 667777765 335899999999888765421 123577889999999994 4
Q ss_pred CeeecCC-CCcccc--------------------cc------------------cccccccCccccccC-CCcC-ccccc
Q 040540 527 PIIHCEG-EDSVTQ--------------------TT------------------TMATIGYMAPEYGSE-GIVS-AKCDV 565 (669)
Q Consensus 527 ~i~h~d~-~~~~~~--------------------~~------------------~~gt~~y~aPE~~~~-~~~~-~~~Dv 565 (669)
+|+|+|+ |+.... .. ...++.|++|+-..- ...+ .+.++
T Consensus 111 GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w 190 (218)
T PRK12274 111 GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELW 190 (218)
T ss_pred cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHH
Confidence 8999999 542100 00 013455555543221 1223 56789
Q ss_pred hhhHHHHHHHHhCCCCCCcC
Q 040540 566 YSYGVLLMETFTRKRPTDEM 585 (669)
Q Consensus 566 ~s~Gvil~el~tg~~p~~~~ 585 (669)
++-|.-+|+++||+.+....
T Consensus 191 ~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 191 FATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred HHhcchHHHHHhccCCcccc
Confidence 99999999999999987653
No 467
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.02 E-value=2e-07 Score=78.36 Aligned_cols=104 Identities=26% Similarity=0.393 Sum_probs=74.8
Q ss_pred EEEEEcCCCCCccccc---ccccCCCCCCEEeCCCCcCcccCCcccC-CCCCCCEEEccCCcCCccCCccccCCcccccc
Q 040540 53 VTALNLSDMGLGGTIP---LHFGNLSFLVSLDISENNFHGHLPKELG-QLRRLRVMSLAYNKLSGSFPSWIGVLSKLRIL 128 (669)
Q Consensus 53 v~~L~ls~~~l~~~~~---~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 128 (669)
...+||+.|.+- .++ ..+....+|+..+|++|.+.. .|..|. ..+.+++|+|++|.++ .+|.++..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 456788887763 333 245566777888888888874 444443 4457888888888887 678888888888888
Q ss_pred cccccCccccCCcccCCCCCCCeeeccccccc
Q 040540 129 RLDYNNFTGPIPNSLFNLSRLEMLRAEFNIIG 160 (669)
Q Consensus 129 ~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~ 160 (669)
+++.|.+. ..|..+..|.+|..|+...|...
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 88888886 56666666777777777666543
No 468
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.96 E-value=8.1e-07 Score=84.48 Aligned_cols=84 Identities=26% Similarity=0.278 Sum_probs=40.0
Q ss_pred CCCCCEEeCCCCcCccc--CCcccCCCCCCCEEEccCCcCCccCCccccCCcccccccccccCcccc-CCcccCCCCCCC
Q 040540 74 LSFLVSLDISENNFHGH--LPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGP-IPNSLFNLSRLE 150 (669)
Q Consensus 74 l~~L~~L~Ls~N~l~~~--~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~ 150 (669)
.+.++.|||.+|.|+.. +-..+.+++.|++|+|+.|+++..+-..-..+.+|++|-|.+..+.=. .-..+..+++++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 35566666666666532 222344566666666666666532211113345566666655554311 112233444444
Q ss_pred eeecccc
Q 040540 151 MLRAEFN 157 (669)
Q Consensus 151 ~L~l~~n 157 (669)
.|.++.|
T Consensus 150 elHmS~N 156 (418)
T KOG2982|consen 150 ELHMSDN 156 (418)
T ss_pred hhhhccc
Confidence 4444444
No 469
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.88 E-value=3.1e-06 Score=80.58 Aligned_cols=86 Identities=24% Similarity=0.253 Sum_probs=66.3
Q ss_pred CCEEEEEcCCCCCcc--cccccccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCc-cCCccccCCccccc
Q 040540 51 QRVTALNLSDMGLGG--TIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSG-SFPSWIGVLSKLRI 127 (669)
Q Consensus 51 ~~v~~L~ls~~~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~ 127 (669)
.+|+.+||.+|.++. .+...+.+|++|++|+|+.|.+...+...-..+.+|++|.|.+..+.- ..-..+..++.++.
T Consensus 71 ~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vte 150 (418)
T KOG2982|consen 71 TDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTE 150 (418)
T ss_pred hhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhh
Confidence 468999999999874 344567899999999999999975443322467899999998887752 23355678899999
Q ss_pred ccccccCcc
Q 040540 128 LRLDYNNFT 136 (669)
Q Consensus 128 L~L~~n~l~ 136 (669)
|.++.|++.
T Consensus 151 lHmS~N~~r 159 (418)
T KOG2982|consen 151 LHMSDNSLR 159 (418)
T ss_pred hhhccchhh
Confidence 999998654
No 470
>PRK10345 hypothetical protein; Provisional
Probab=97.84 E-value=1.4e-05 Score=75.92 Aligned_cols=83 Identities=11% Similarity=0.158 Sum_probs=63.9
Q ss_pred ccCchhhhhhccc-----cccccceecccccccc---c-cceeecc--CCCCChHHhhhcCCCccCHHHHHHHHHhHHhh
Q 040540 447 RSFDSECEVLRNV-----RHRNLIKIISSCSNPD---F-KALVLEF--MPNGSLEKWLYSHNYFLDILERLNIMIDVGSA 515 (669)
Q Consensus 447 ~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~-~~lv~ey--~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~ 515 (669)
+.+.+|+..+..+ .||||+++++++..+. . ..+|+|| +++|+|.+++.+. .+++. ..++.++..+
T Consensus 41 ~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~ 116 (210)
T PRK10345 41 KEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKK 116 (210)
T ss_pred HHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHH
Confidence 3567889999888 5799999999987753 3 3378999 6689999999753 24444 3567788878
Q ss_pred h-hhhhcCCCCCCeeecCCCCcc
Q 040540 516 L-EYLRHGHSSAPIIHCEGEDSV 537 (669)
Q Consensus 516 l-~~lh~~~~~~~i~h~d~~~~~ 537 (669)
+ +|||. .+|+|||+|+..
T Consensus 117 l~~yLh~----~~IvhrDlKp~N 135 (210)
T PRK10345 117 LKRYLLD----NRIVTMELKPQN 135 (210)
T ss_pred HHHHHHH----CCEeecCCCHHH
Confidence 7 99995 479999999763
No 471
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=97.81 E-value=4.4e-07 Score=86.22 Aligned_cols=85 Identities=25% Similarity=0.241 Sum_probs=43.8
Q ss_pred ccccccccccCccc-cCCcccCCCCCCCeeecccccccccCCcccCCCCCCCEEEcccCC-Cccc-CCccccCCCCCCEE
Q 040540 124 KLRILRLDYNNFTG-PIPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCN-LQGQ-IPTEIGSLQNLKNL 200 (669)
Q Consensus 124 ~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~-l~~~-~p~~~~~l~~L~~L 200 (669)
.|++|||++..++. .+...+..+++|+.|.+.++++...+-..++.-.+|+.|+++.++ ++.. ..-.+..++.|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 46666666666652 122334455566666666666655555555555566666665544 2210 11123445555555
Q ss_pred EccCCCCC
Q 040540 201 DLADNKLS 208 (669)
Q Consensus 201 ~l~~N~l~ 208 (669)
+|++|.++
T Consensus 266 NlsWc~l~ 273 (419)
T KOG2120|consen 266 NLSWCFLF 273 (419)
T ss_pred CchHhhcc
Confidence 55555544
No 472
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.80 E-value=2.5e-06 Score=71.88 Aligned_cols=111 Identities=26% Similarity=0.383 Sum_probs=83.6
Q ss_pred CCCEEEEEcCCCCCcccccccc-cCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccc
Q 040540 50 HQRVTALNLSDMGLGGTIPLHF-GNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRIL 128 (669)
Q Consensus 50 ~~~v~~L~ls~~~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 128 (669)
...++..+|++|++.. .|+.| ...+.++.|+|++|.++ .+|.++..++.|+.|+++.|.+. ..|..+..|.+|-+|
T Consensus 52 ~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~L 128 (177)
T KOG4579|consen 52 GYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDML 128 (177)
T ss_pred CceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHh
Confidence 4678999999999974 44444 45568999999999998 68888999999999999999998 678888889999999
Q ss_pred cccccCccccCCcccCCCCCCCeeecccccccccCC
Q 040540 129 RLDYNNFTGPIPNSLFNLSRLEMLRAEFNIIGGTIP 164 (669)
Q Consensus 129 ~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p 164 (669)
+..+|... .+|-.+..-..+-..++.++.+++.-+
T Consensus 129 ds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~ 163 (177)
T KOG4579|consen 129 DSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETK 163 (177)
T ss_pred cCCCCccc-cCcHHHhccccHHHHHhcCCcccccCc
Confidence 99999876 455443332223333344444444433
No 473
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=97.79 E-value=2.8e-07 Score=87.59 Aligned_cols=155 Identities=20% Similarity=0.204 Sum_probs=70.7
Q ss_pred CCcccccccccccCccccCCcccCCCCCCCeeeccccc-ccc-cCCcccCCCCCCCEEEcccCCCcccCCcc-ccC-CCC
Q 040540 121 VLSKLRILRLDYNNFTGPIPNSLFNLSRLEMLRAEFNI-IGG-TIPSRIGNLRKLVNLGLWSCNLQGQIPTE-IGS-LQN 196 (669)
Q Consensus 121 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~-l~~-~~p~~~~~L~~L~~L~l~~n~l~~~~p~~-~~~-l~~ 196 (669)
...+|+.|.|.++++...+-..+.+-.+|+.|+++.+. ++. ...--+.+++.|..|+++-|.+....-.. +.+ -++
T Consensus 208 ~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~ 287 (419)
T KOG2120|consen 208 QCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISET 287 (419)
T ss_pred HHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhchh
Confidence 33444444444444444444444444444444444321 110 00011334455555555555543322111 111 134
Q ss_pred CCEEEccCCCCC---CCCCccccCCCCCcEEEcccCC-CccccchhhhccCCCCCeeecccCcccccCCcc---ccCCCC
Q 040540 197 LKNLDLADNKLS---GLIPPTIFNISTMRILTLESNQ-LSGRLPSTIGHSLRNIEYLALSTNNLIGKIPNS---ITNATK 269 (669)
Q Consensus 197 L~~L~l~~N~l~---~~~p~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~~l~~L~~L~ls~n~l~~~~p~~---~~~l~~ 269 (669)
|+.|+|+++.-. .-+..-....++|..|||+.|. ++...-..++ .++-|++|.++.|. +.+|.. +...+.
T Consensus 288 l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~-kf~~L~~lSlsRCY--~i~p~~~~~l~s~ps 364 (419)
T KOG2120|consen 288 LTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFF-KFNYLQHLSLSRCY--DIIPETLLELNSKPS 364 (419)
T ss_pred hhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHH-hcchheeeehhhhc--CCChHHeeeeccCcc
Confidence 555555554211 0111112345566666666653 3322222333 56777777777765 445553 456677
Q ss_pred CCEEeCCCC
Q 040540 270 LIGLDLGFN 278 (669)
Q Consensus 270 L~~L~ls~n 278 (669)
|.+||..++
T Consensus 365 l~yLdv~g~ 373 (419)
T KOG2120|consen 365 LVYLDVFGC 373 (419)
T ss_pred eEEEEeccc
Confidence 888887554
No 474
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.77 E-value=1.4e-05 Score=54.48 Aligned_cols=36 Identities=39% Similarity=0.579 Sum_probs=15.1
Q ss_pred CCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCC
Q 040540 76 FLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLS 112 (669)
Q Consensus 76 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~ 112 (669)
+|++|++++|.|+ .+|..++++++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 3444444444444 23333444444444444444443
No 475
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.69 E-value=3e-05 Score=52.80 Aligned_cols=37 Identities=24% Similarity=0.461 Sum_probs=28.8
Q ss_pred CCCCEEEccCCcCCccCCccccCCcccccccccccCcc
Q 040540 99 RRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFT 136 (669)
Q Consensus 99 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 136 (669)
++|++|++++|+|+ .+|..+++|++|++|++++|+++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 46888888888888 56667888888888888888887
No 476
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.67 E-value=0.0001 Score=75.61 Aligned_cols=31 Identities=23% Similarity=0.311 Sum_probs=15.2
Q ss_pred CCCEEEccCCCCCCCCCccccCCCCCcEEEcccC
Q 040540 196 NLKNLDLADNKLSGLIPPTIFNISTMRILTLESN 229 (669)
Q Consensus 196 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n 229 (669)
+|++|++++|.... .|..+- .+|+.|.++.|
T Consensus 157 SLk~L~Is~c~~i~-LP~~LP--~SLk~L~ls~n 187 (426)
T PRK15386 157 SLKTLSLTGCSNII-LPEKLP--ESLQSITLHIE 187 (426)
T ss_pred cccEEEecCCCccc-Cccccc--ccCcEEEeccc
Confidence 46666666555432 222221 35666666554
No 477
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=97.65 E-value=4.2e-05 Score=71.77 Aligned_cols=81 Identities=12% Similarity=0.100 Sum_probs=57.9
Q ss_pred hhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeee
Q 040540 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH 530 (669)
Q Consensus 451 ~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h 530 (669)
.|...+..+.++++....... ....++||||++++++...... ...++..+...++.+++.++.|+||. .+|+|
T Consensus 68 ~E~~~l~~l~~~~v~~p~~~~--~~~~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H~---~giiH 141 (190)
T cd05147 68 KEMRNLKRLVTAGIPCPEPIL--LKSHVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQD---CRLVH 141 (190)
T ss_pred HHHHHHHHHHHCCCCCCcEEE--ecCCEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHHh---CCccc
Confidence 477788888776653322211 1223799999998877654332 24578888999999999999999543 47999
Q ss_pred cCCCCcc
Q 040540 531 CEGEDSV 537 (669)
Q Consensus 531 ~d~~~~~ 537 (669)
+|+|+..
T Consensus 142 rDlkP~N 148 (190)
T cd05147 142 ADLSEYN 148 (190)
T ss_pred CCCCHHH
Confidence 9999763
No 478
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.52 E-value=0.00023 Score=73.12 Aligned_cols=57 Identities=18% Similarity=0.139 Sum_probs=36.2
Q ss_pred ccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCccccccccccc
Q 040540 71 FGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYN 133 (669)
Q Consensus 71 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 133 (669)
+..+.+++.|++++|.++ .+|. + -.+|+.|.++++.--..+|+.+ ..+|++|++++|
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP~-L--P~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~C 104 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLPV-L--PNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHC 104 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccCC-C--CCCCcEEEccCCCCcccCCchh--hhhhhheEccCc
Confidence 445678888999988776 4452 2 2358888887744333556544 246777777766
No 479
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.51 E-value=7.2e-05 Score=70.62 Aligned_cols=179 Identities=18% Similarity=0.201 Sum_probs=87.7
Q ss_pred cccCCCCCCEEeCCCCCccccCccc----cCCCCCCCEEEccCCccccCCCCCcc-----cccccccCCCCCCCEEECcC
Q 040540 263 SITNATKLIGLDLGFNSFSGHIPNT----FGNLRHLSVLNVMMNNLTTESSSADQ-----WSFLSSLTNCRNLSNLALAS 333 (669)
Q Consensus 263 ~~~~l~~L~~L~ls~n~l~~~~p~~----~~~l~~L~~L~l~~N~l~~~~~~~~~-----~~~~~~l~~l~~L~~L~l~~ 333 (669)
.+..|+.|+.++||.|.|....|.. +..-+.|.+|.+.+|.+.......-. ..+......-+.|+......
T Consensus 87 aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgr 166 (388)
T COG5238 87 ALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGR 166 (388)
T ss_pred HHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEecc
Confidence 3456677777777777776555542 34556677777776665432211100 00111122334555555555
Q ss_pred CCCccccchhHhhhhccccccceEeecCcccCCCCCccccccCCCcEEecCCCccccc-----CchhhcCCCCCCeeeCc
Q 040540 334 NPLGGILPQLIGNFSASLQNIYAFELGFNDLNGTIPTSIGTLQQLQGFYVPENNLQGY-----VPHDLCHLERLNILNLS 408 (669)
Q Consensus 334 n~l~~~~~~~~~~~~~~l~~l~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~~~~~-----~p~~~~~l~~L~~L~ls 408 (669)
|++..-....+... +..-..|+.+.+..|.|.-. .-..+..+.+|+.||+.
T Consensus 167 NRlengs~~~~a~~------------------------l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlq 222 (388)
T COG5238 167 NRLENGSKELSAAL------------------------LESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQ 222 (388)
T ss_pred chhccCcHHHHHHH------------------------HHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeecc
Confidence 55432222222111 11112344444444443211 11122345677778888
Q ss_pred CCccceeC----cccccCCCCCCEEECCCCcceecCCcccccccCchhhhhhccccccccceecccccc
Q 040540 409 GNKLSGHI----PPCLASLTSLRELHLGSNKLSSSIPSSLAFRSFDSECEVLRNVRHRNLIKIISSCSN 473 (669)
Q Consensus 409 ~n~l~~~~----p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 473 (669)
+|.++... ...+..++.|++|.+..|-++..- .. .-.........||+-.+.+-|..
T Consensus 223 DNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G-----~~---~v~~~f~e~~~p~l~~L~~~Yne 283 (388)
T COG5238 223 DNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEG-----VK---SVLRRFNEKFVPNLMPLPGDYNE 283 (388)
T ss_pred ccchhhhhHHHHHHHhcccchhhhccccchhhcccc-----HH---HHHHHhhhhcCCCccccccchhh
Confidence 77776432 234455667888888877765311 11 11223344556766666655533
No 480
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.43 E-value=3.4e-05 Score=72.72 Aligned_cols=37 Identities=22% Similarity=0.382 Sum_probs=17.7
Q ss_pred CCCEEEccCCCCCCC-----CCccccCCCCCcEEEcccCCCc
Q 040540 196 NLKNLDLADNKLSGL-----IPPTIFNISTMRILTLESNQLS 232 (669)
Q Consensus 196 ~L~~L~l~~N~l~~~-----~p~~~~~l~~L~~L~l~~n~l~ 232 (669)
+|+.+.+..|.|.-. .-..++.+.+|+.||++.|.++
T Consensus 186 ~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft 227 (388)
T COG5238 186 NLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFT 227 (388)
T ss_pred CceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchh
Confidence 455555555554311 1112334455666666666554
No 481
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.42 E-value=4.1e-05 Score=85.33 Aligned_cols=149 Identities=18% Similarity=0.249 Sum_probs=89.1
Q ss_pred CCCCEEEccCCcCCcc-CCccc-cCCcccccccccccCcccc-CCcccCCCCCCCeeecccccccccCCcccCCCCCCCE
Q 040540 99 RRLRVMSLAYNKLSGS-FPSWI-GVLSKLRILRLDYNNFTGP-IPNSLFNLSRLEMLRAEFNIIGGTIPSRIGNLRKLVN 175 (669)
Q Consensus 99 ~~L~~L~L~~n~l~~~-~p~~~-~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~ 175 (669)
.+|++||+++...... =|..+ .-||+|+.|.+++-.+... .-....++++|..||+++.+++.. ..+++|++|++
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 5677777777553211 12222 2467777777777555421 122344677777778777776533 56777888887
Q ss_pred EEcccCCCcc-cCCccccCCCCCCEEEccCCCCCCCC------CccccCCCCCcEEEcccCCCccccchhhhccCCCCCe
Q 040540 176 LGLWSCNLQG-QIPTEIGSLQNLKNLDLADNKLSGLI------PPTIFNISTMRILTLESNQLSGRLPSTIGHSLRNIEY 248 (669)
Q Consensus 176 L~l~~n~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~------p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~ 248 (669)
|.+.+-.+.. ..-..+..|++|+.||+|........ -+.-..+++|+.||.|++.+.+.+-+.+-..-++|+.
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~~ 279 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQQ 279 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHhh
Confidence 7776555542 11124567888888888876654321 1112347889999999888776555544433444544
Q ss_pred e
Q 040540 249 L 249 (669)
Q Consensus 249 L 249 (669)
+
T Consensus 280 i 280 (699)
T KOG3665|consen 280 I 280 (699)
T ss_pred h
Confidence 4
No 482
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.41 E-value=0.00016 Score=81.93 Aligned_cols=113 Identities=17% Similarity=0.118 Sum_probs=90.2
Q ss_pred ccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCcc-----
Q 040540 463 NLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDSV----- 537 (669)
Q Consensus 463 niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~~----- 537 (669)
.+..+..+....+.-.+|+||.+.|+|-+++- ....++|.-.+.++.++++-++.||. .+|||+|+|+..
T Consensus 755 ~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~----~~IIHgDiKPDNfll~~ 829 (974)
T KOG1166|consen 755 SIMHISSAHVFQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHA----MGIIHGDIKPDNFLLRR 829 (974)
T ss_pred chHHHHHHHccCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHh----cceecccCCcceeEeec
Confidence 34444455555677789999999999999997 45568999899999999999999994 479999999531
Q ss_pred -----------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCC
Q 040540 538 -----------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 580 (669)
Q Consensus 538 -----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~ 580 (669)
.-....+|-.+--+|+..++..+..+|-|.++-+++-|+-|+.
T Consensus 830 ~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 830 EICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 1111235666777899999999999999999999999999973
No 483
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=97.41 E-value=0.00012 Score=80.68 Aligned_cols=77 Identities=21% Similarity=0.290 Sum_probs=65.1
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|...+..++|++++....++......++||||+++++|.+++. .+..++.++++++.|+|. .+
T Consensus 382 ~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~----~g 448 (535)
T PRK09605 382 RTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHK----AG 448 (535)
T ss_pred HHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHh----CC
Confidence 46678999999999998877766666667789999999999999885 356789999999999995 47
Q ss_pred eeecCCCCcc
Q 040540 528 IIHCEGEDSV 537 (669)
Q Consensus 528 i~h~d~~~~~ 537 (669)
++|+|+|+..
T Consensus 449 iiHrDlkp~N 458 (535)
T PRK09605 449 IVHGDLTTSN 458 (535)
T ss_pred CccCCCChHH
Confidence 9999999764
No 484
>PRK14879 serine/threonine protein kinase; Provisional
Probab=97.38 E-value=0.00014 Score=69.68 Aligned_cols=81 Identities=20% Similarity=0.300 Sum_probs=65.7
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..+.|+++.....++......+++|||+++++|.+++... .+ .+..++.++++++.++|. .+
T Consensus 45 ~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~----~~-~~~~i~~~i~~~l~~lH~----~~ 115 (211)
T PRK14879 45 RTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSN----GM-EELELSREIGRLVGKLHS----AG 115 (211)
T ss_pred HHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhc----cH-HHHHHHHHHHHHHHHHHh----CC
Confidence 3556888888888888876666666667778999999999999998642 22 788899999999999995 47
Q ss_pred eeecCCCCcc
Q 040540 528 IIHCEGEDSV 537 (669)
Q Consensus 528 i~h~d~~~~~ 537 (669)
++|+|+++..
T Consensus 116 i~H~Dl~p~N 125 (211)
T PRK14879 116 IIHGDLTTSN 125 (211)
T ss_pred cccCCCCccc
Confidence 9999999764
No 485
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=97.34 E-value=0.00022 Score=67.07 Aligned_cols=81 Identities=16% Similarity=0.107 Sum_probs=58.3
Q ss_pred chhhhhhccccccccceeccccccccccceeeccCCCCChHHh-hhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCe
Q 040540 450 DSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKW-LYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPI 528 (669)
Q Consensus 450 ~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~-l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i 528 (669)
..|...+.++.|+++.....+... ..++||||++++++... +.. ..++..+...++.+++.++.++|+. .++
T Consensus 67 ~~E~~~l~~l~~~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~---~gi 139 (190)
T cd05145 67 EKEFRNLKRLYEAGVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQE---AGL 139 (190)
T ss_pred HHHHHHHHHHHhCCCCCceEEEec--CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHh---CCE
Confidence 357778888888876433322221 24799999998755443 432 3467778889999999999999962 489
Q ss_pred eecCCCCcc
Q 040540 529 IHCEGEDSV 537 (669)
Q Consensus 529 ~h~d~~~~~ 537 (669)
+|+|+|+..
T Consensus 140 vHrDlkP~N 148 (190)
T cd05145 140 VHGDLSEYN 148 (190)
T ss_pred ecCCCChhh
Confidence 999999764
No 486
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.33 E-value=0.00037 Score=63.24 Aligned_cols=84 Identities=23% Similarity=0.197 Sum_probs=37.0
Q ss_pred CCCCCCeeecccccccccCCcccCCCCCCCEEEcccCCCcccC-CccccCCCCCCEEEccCCCCCCC---CCccccCCCC
Q 040540 145 NLSRLEMLRAEFNIIGGTIPSRIGNLRKLVNLGLWSCNLQGQI-PTEIGSLQNLKNLDLADNKLSGL---IPPTIFNIST 220 (669)
Q Consensus 145 ~l~~L~~L~l~~n~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~---~p~~~~~l~~ 220 (669)
.+++|.+|.+++|.++..-|.--.-+++|..|.+.+|++...- -.-+..+++|++|.+-+|..+.. --..+..+++
T Consensus 62 ~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~ 141 (233)
T KOG1644|consen 62 HLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPS 141 (233)
T ss_pred CccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCc
Confidence 3334444444444443333332223344444555554443110 01134556666666666655432 1223445556
Q ss_pred CcEEEccc
Q 040540 221 MRILTLES 228 (669)
Q Consensus 221 L~~L~l~~ 228 (669)
|+.||++.
T Consensus 142 l~~LDF~k 149 (233)
T KOG1644|consen 142 LRTLDFQK 149 (233)
T ss_pred ceEeehhh
Confidence 66665544
No 487
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.32 E-value=0.00016 Score=67.18 Aligned_cols=130 Identities=19% Similarity=0.167 Sum_probs=92.8
Q ss_pred hhhhhccccc-cccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeee
Q 040540 452 ECEVLRNVRH-RNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH 530 (669)
Q Consensus 452 e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h 530 (669)
|..+-+.+++ ..+..+..+.....+-.+|||.. +-+|.++..--....+..+.+-.+-|+..-++|+|. +..||
T Consensus 60 EskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~----r~fiH 134 (341)
T KOG1163|consen 60 ESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHL----RNFIH 134 (341)
T ss_pred HHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHh----hcccc
Confidence 4444444443 23333444556677788999977 568888876444456777888888999999999994 47999
Q ss_pred cCCCCcc-----------------------------------cccccccccccCccccccCCCcCccccchhhHHHHHHH
Q 040540 531 CEGEDSV-----------------------------------TQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMET 575 (669)
Q Consensus 531 ~d~~~~~-----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el 575 (669)
||+|+.. ......||..|.+-....+..-+.+.|.=|+|-++.-.
T Consensus 135 RDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYf 214 (341)
T KOG1163|consen 135 RDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYF 214 (341)
T ss_pred ccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeee
Confidence 9999641 11122488888765544444456789999999999999
Q ss_pred HhCCCCCCcCC
Q 040540 576 FTRKRPTDEMF 586 (669)
Q Consensus 576 ~tg~~p~~~~~ 586 (669)
--|+.||.+..
T Consensus 215 nrG~LPWQglk 225 (341)
T KOG1163|consen 215 NRGSLPWQGLK 225 (341)
T ss_pred ecCCCcccccc
Confidence 99999998754
No 488
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=97.29 E-value=0.00016 Score=68.57 Aligned_cols=78 Identities=21% Similarity=0.314 Sum_probs=60.6
Q ss_pred cCchhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCC
Q 040540 448 SFDSECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAP 527 (669)
Q Consensus 448 ~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~ 527 (669)
.+..|+..+..++|+++.....++......+++|||+++++|.+++..... .++.++++++.++|. .+
T Consensus 43 ~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~----~g 110 (199)
T TIGR03724 43 RTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGND--------ELLREIGRLVGKLHK----AG 110 (199)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcHH--------HHHHHHHHHHHHHHH----CC
Confidence 455788888888887765544455556667899999999999998864211 788999999999994 48
Q ss_pred eeecCCCCcc
Q 040540 528 IIHCEGEDSV 537 (669)
Q Consensus 528 i~h~d~~~~~ 537 (669)
++|+|+++..
T Consensus 111 i~H~Dl~~~N 120 (199)
T TIGR03724 111 IVHGDLTTSN 120 (199)
T ss_pred eecCCCCcce
Confidence 9999999753
No 489
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.23 E-value=0.0006 Score=66.51 Aligned_cols=121 Identities=14% Similarity=0.148 Sum_probs=93.5
Q ss_pred cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeeecCCCCc---
Q 040540 460 RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIHCEGEDS--- 536 (669)
Q Consensus 460 ~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h~d~~~~--- 536 (669)
..+.|...+.+-....+-.+|+|.. +-+|.++..-.+..++..+.+.||+|...-++|+|.. .+|-||+|+.
T Consensus 82 g~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k----~LIYRDIKPdNFL 156 (449)
T KOG1165|consen 82 GTEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK----DLIYRDIKPDNFL 156 (449)
T ss_pred CCCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc----ceeecccCcccee
Confidence 3455555555555566667999977 4678777654556688889999999999999999954 6888998853
Q ss_pred ----------------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCC
Q 040540 537 ----------------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT 582 (669)
Q Consensus 537 ----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 582 (669)
-...+..||..||.=....++.-+.+.|.=|+|=+.+-.+-|..||
T Consensus 157 IGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPW 236 (449)
T KOG1165|consen 157 IGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 236 (449)
T ss_pred ecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcc
Confidence 1123335899999877777777788999999999999999999999
Q ss_pred CcC
Q 040540 583 DEM 585 (669)
Q Consensus 583 ~~~ 585 (669)
.+.
T Consensus 237 QGL 239 (449)
T KOG1165|consen 237 QGL 239 (449)
T ss_pred ccc
Confidence 864
No 490
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=97.23 E-value=0.00061 Score=72.91 Aligned_cols=118 Identities=19% Similarity=0.234 Sum_probs=80.7
Q ss_pred hhhhhhccccccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCCCeee
Q 040540 451 SECEVLRNVRHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSAPIIH 530 (669)
Q Consensus 451 ~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~~i~h 530 (669)
+.+.-++.++||||++++.........|+|.|-+. .|..++.+. ......-.+.||++||.|||+. ..++|
T Consensus 58 ~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l----~~~~v~~Gl~qIl~AL~FL~~d---~~lvH 128 (690)
T KOG1243|consen 58 RAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL----GKEEVCLGLFQILAALSFLNDD---CNLVH 128 (690)
T ss_pred HHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh----HHHHHHHHHHHHHHHHHHHhcc---CCeee
Confidence 44667888999999999999998889999999873 677777653 2344455678999999999864 57899
Q ss_pred cCCCCcccc-c--c--cccccc--------------------cCccccccCCCcCccccchhhHHHHHHHHhCC
Q 040540 531 CEGEDSVTQ-T--T--TMATIG--------------------YMAPEYGSEGIVSAKCDVYSYGVLLMETFTRK 579 (669)
Q Consensus 531 ~d~~~~~~~-~--~--~~gt~~--------------------y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~ 579 (669)
.++.-.... + . ..|... |..|+.+... +...|-|-||++++|++.|.
T Consensus 129 gNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s--~~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 129 GNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPS--EWSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred ccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCcc--ccchhhhhHHHHHHHHhCcc
Confidence 886532100 0 0 012222 2233322211 13469999999999999994
No 491
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.22 E-value=0.00012 Score=81.76 Aligned_cols=95 Identities=18% Similarity=0.169 Sum_probs=48.5
Q ss_pred ccCCCCCeeecccCcccccCCccccCCCCCCEEeCCCCCccc-cCccccCCCCCCCEEEccCCccccCCCCCcccccccc
Q 040540 241 HSLRNIEYLALSTNNLIGKIPNSITNATKLIGLDLGFNSFSG-HIPNTFGNLRHLSVLNVMMNNLTTESSSADQWSFLSS 319 (669)
Q Consensus 241 ~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~ 319 (669)
.++++|..||+|+.+++.. ..++++++|+.|.+.+=.+.. ..-..+.+|++|++||++.......... ...++..
T Consensus 170 ~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~i--i~qYlec 245 (699)
T KOG3665|consen 170 ASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKI--IEQYLEC 245 (699)
T ss_pred hccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhcccCCCeeeccccccccchHH--HHHHHHh
Confidence 3556666666666555422 344555555555544333221 1112345667777777766544333211 1122333
Q ss_pred cCCCCCCCEEECcCCCCccc
Q 040540 320 LTNCRNLSNLALASNPLGGI 339 (669)
Q Consensus 320 l~~l~~L~~L~l~~n~l~~~ 339 (669)
-..+|+|+.||.+++.+...
T Consensus 246 ~~~LpeLrfLDcSgTdi~~~ 265 (699)
T KOG3665|consen 246 GMVLPELRFLDCSGTDINEE 265 (699)
T ss_pred cccCccccEEecCCcchhHH
Confidence 44567777777777665543
No 492
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.21 E-value=0.00059 Score=72.11 Aligned_cols=126 Identities=18% Similarity=0.170 Sum_probs=93.9
Q ss_pred hhhhhccc-cccccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHh----hhhhhhcCCCCC
Q 040540 452 ECEVLRNV-RHRNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGS----ALEYLRHGHSSA 526 (669)
Q Consensus 452 e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~----~l~~lh~~~~~~ 526 (669)
|.....++ .|++.++........+..++-.|++. .++.++-+.....++.....++..+..+ |+..+|. .
T Consensus 167 ~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs----~ 241 (524)
T KOG0601|consen 167 EFLSHHKIDSHENPVRDSPAWEGSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHS----N 241 (524)
T ss_pred hhhcccccCccccccccCcccccCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCC----C
Confidence 44444444 48888887777777888888888886 7888888776666777777888888877 9999984 4
Q ss_pred CeeecCCCCc-------------------------------ccccccccccccCccccccCCCcCccccchhhHHHHHHH
Q 040540 527 PIIHCEGEDS-------------------------------VTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMET 575 (669)
Q Consensus 527 ~i~h~d~~~~-------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el 575 (669)
.++|.|+++. .......|...|++||...+ .++.++|+|++|.+..|.
T Consensus 242 ~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~ 320 (524)
T KOG0601|consen 242 NIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEA 320 (524)
T ss_pred cccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhh
Confidence 7888776632 00111146778999997754 478899999999999999
Q ss_pred HhCCCCCC
Q 040540 576 FTRKRPTD 583 (669)
Q Consensus 576 ~tg~~p~~ 583 (669)
.+|..+..
T Consensus 321 ~l~~~~~~ 328 (524)
T KOG0601|consen 321 ILGSHLPS 328 (524)
T ss_pred Hhhccccc
Confidence 99876543
No 493
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.16 E-value=0.00046 Score=62.59 Aligned_cols=80 Identities=23% Similarity=0.154 Sum_probs=35.3
Q ss_pred EEEEcCCCCCcccccccccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccC-CccccCCcccccccccc
Q 040540 54 TALNLSDMGLGGTIPLHFGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSF-PSWIGVLSKLRILRLDY 132 (669)
Q Consensus 54 ~~L~ls~~~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~ 132 (669)
..+||+.|.+... ..|..++.|.+|.|++|+|+.+.|.--..+++|+.|.|.+|.|...- -+.+..+++|++|.+-+
T Consensus 45 d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll~ 122 (233)
T KOG1644|consen 45 DAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTLLG 122 (233)
T ss_pred ceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeeecC
Confidence 3455555554321 12444455555555555555444443334444555555555543110 01233344444444444
Q ss_pred cCc
Q 040540 133 NNF 135 (669)
Q Consensus 133 n~l 135 (669)
|..
T Consensus 123 Npv 125 (233)
T KOG1644|consen 123 NPV 125 (233)
T ss_pred Cch
Confidence 443
No 494
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=96.68 E-value=0.00088 Score=71.23 Aligned_cols=131 Identities=17% Similarity=0.172 Sum_probs=93.0
Q ss_pred Cchhhhhhccccccc-cceeccccccccccceeeccCCCC-ChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 449 FDSECEVLRNVRHRN-LIKIISSCSNPDFKALVLEFMPNG-SLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 449 ~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ey~~~g-~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
...+++++.++.||| .+..++.+....+.+++++|+..| +-....-.....+...+-..+.+...++++++|..
T Consensus 280 ~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~---- 355 (829)
T KOG0576|consen 280 RRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSS---- 355 (829)
T ss_pred hHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccc----
Confidence 345788899999999 777778888888899999999877 22222211112233334445566677899999854
Q ss_pred CeeecC---CC----------------CcccccccccccccCccccccCCCcCccccchhhHHHHHHHHhCCCCCC
Q 040540 527 PIIHCE---GE----------------DSVTQTTTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTD 583 (669)
Q Consensus 527 ~i~h~d---~~----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 583 (669)
.-+|+| .. +.....+..+|+.|+|||+.....+..+.|+|+.|+-..+|..|-.|-.
T Consensus 356 ~~~~~d~~l~s~~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 356 YKVHRDNILGSEEEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred cccCcccccccccccccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 235664 11 0122445679999999999999999999999999998888888877743
No 495
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.66 E-value=0.0012 Score=62.58 Aligned_cols=62 Identities=24% Similarity=0.323 Sum_probs=27.9
Q ss_pred CCCCCCeeecccc--cccccCCcccCCCCCCCEEEcccCCCcccCCcc---ccCCCCCCEEEccCCCCC
Q 040540 145 NLSRLEMLRAEFN--IIGGTIPSRIGNLRKLVNLGLWSCNLQGQIPTE---IGSLQNLKNLDLADNKLS 208 (669)
Q Consensus 145 ~l~~L~~L~l~~n--~l~~~~p~~~~~L~~L~~L~l~~n~l~~~~p~~---~~~l~~L~~L~l~~N~l~ 208 (669)
.|++|+.|.++.| ...+.++-....+++|++|++++|++.. +.. +..+.+|..||+.+|..+
T Consensus 63 ~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~--lstl~pl~~l~nL~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 63 KLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKD--LSTLRPLKELENLKSLDLFNCSVT 129 (260)
T ss_pred CcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccc--ccccchhhhhcchhhhhcccCCcc
Confidence 3444444444444 3333333333344555555555555531 111 234445555555555544
No 496
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=96.48 E-value=0.022 Score=57.86 Aligned_cols=162 Identities=13% Similarity=0.075 Sum_probs=94.6
Q ss_pred ccCHHHHHHHHHhHHhhhhhhhcCCCCCC-------eeecCCC------Cc-------ccccccccccccCcccccc---
Q 040540 499 FLDILERLNIMIDVGSALEYLRHGHSSAP-------IIHCEGE------DS-------VTQTTTMATIGYMAPEYGS--- 555 (669)
Q Consensus 499 ~l~~~~~~~i~~~i~~~l~~lh~~~~~~~-------i~h~d~~------~~-------~~~~~~~gt~~y~aPE~~~--- 555 (669)
...|.-.+++++.+|.+.+-||..+-..+ .+..|.+ ++ ......+|...|.+||...
T Consensus 113 ~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~s 192 (637)
T COG4248 113 HCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPS 192 (637)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeeccCCceEecccCccccCCHHHhcccc
Confidence 46789999999999999999995432211 1111111 11 1122336889999999654
Q ss_pred --CCCcCccccchhhHHHHHHHHhC-CCCCCcCCCC---CccHHHHHH-HhCCCCccccccccccchhhhhhhhHHHHHH
Q 040540 556 --EGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTG---EMSLRRWVK-ESLPHRLSEVVDTNLVREEQAFSAKMDCLLS 628 (669)
Q Consensus 556 --~~~~~~~~Dv~s~Gvil~el~tg-~~p~~~~~~~---~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (669)
+..-+...|-|.+||++|+++-| +.||++.... ...+-.-+. ..+..... -.+... ..++...+.-...+
T Consensus 193 f~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~--~~~g~~-p~P~~~P~~~Lpp~ 269 (637)
T COG4248 193 FVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASD--QRRGLK-PPPRSIPLSMLPPD 269 (637)
T ss_pred ccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechh--ccCCCC-CCCCCCChhhcCHH
Confidence 22245678999999999999887 9999763311 111100000 00000000 000000 01111223344456
Q ss_pred HHHHHhhcccCC--CCCCCCHHHHHHHHHHhHHHhhh
Q 040540 629 IMDLALDCCMES--PDKRMHMTDAAAKLKKIKVKFLD 663 (669)
Q Consensus 629 ~~~l~~~c~~~~--P~~Rps~~~v~~~l~~~~~~~~~ 663 (669)
+.-+..+|+... |.-||+++..+..|..+.+.+.+
T Consensus 270 vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~ 306 (637)
T COG4248 270 VQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKK 306 (637)
T ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhh
Confidence 777788888654 56899999999999998887654
No 497
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.46 E-value=0.0015 Score=61.90 Aligned_cols=61 Identities=20% Similarity=0.297 Sum_probs=35.9
Q ss_pred CCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCC--cCCccCCccccCCcccccccccccCcc
Q 040540 74 LSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYN--KLSGSFPSWIGVLSKLRILRLDYNNFT 136 (669)
Q Consensus 74 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n--~l~~~~p~~~~~l~~L~~L~L~~n~l~ 136 (669)
+..|+.|++.+..++.. ..|..|++|+.|.++.| ++++.++-....+++|++|+|++|+++
T Consensus 42 ~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~ 104 (260)
T KOG2739|consen 42 FVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK 104 (260)
T ss_pred ccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc
Confidence 33444444555444311 23556677777777777 555555555555677777777777765
No 498
>smart00090 RIO RIO-like kinase.
Probab=96.44 E-value=0.0026 Score=61.94 Aligned_cols=80 Identities=16% Similarity=0.140 Sum_probs=55.9
Q ss_pred Cchhhhhhccccccc--cceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCCC
Q 040540 449 FDSECEVLRNVRHRN--LIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSSA 526 (669)
Q Consensus 449 ~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 526 (669)
+..|...+..+.+.. +.+.+.. ...++||||++++++..+.... ......+...++.+++.+++++|..
T Consensus 97 ~~~E~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---- 167 (237)
T smart00090 97 AEKEFRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLYKE---- 167 (237)
T ss_pred HHHHHHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHHhc----
Confidence 446777787776532 2233322 2347999999998887765322 3345556678999999999999954
Q ss_pred C-eeecCCCCcc
Q 040540 527 P-IIHCEGEDSV 537 (669)
Q Consensus 527 ~-i~h~d~~~~~ 537 (669)
+ ++|+|+++..
T Consensus 168 g~iiH~Dikp~N 179 (237)
T smart00090 168 GELVHGDLSEYN 179 (237)
T ss_pred CCEEeCCCChhh
Confidence 6 9999999763
No 499
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=96.44 E-value=0.0032 Score=56.21 Aligned_cols=81 Identities=15% Similarity=0.197 Sum_probs=64.0
Q ss_pred cCchhhhhhccccc--cccceeccccccccccceeeccCCCCChHHhhhcCCCccCHHHHHHHHHhHHhhhhhhhcCCCC
Q 040540 448 SFDSECEVLRNVRH--RNLIKIISSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLRHGHSS 525 (669)
Q Consensus 448 ~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~ 525 (669)
.+..|...+..+++ ..+.+++++....+..+++|||++++.+..+ +......++.+++++++++|.. ..
T Consensus 37 ~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~-~~ 107 (155)
T cd05120 37 DREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQL-PL 107 (155)
T ss_pred HHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC--------CHHHHHHHHHHHHHHHHHHhCC-Cc
Confidence 46678888888876 4778888877777788999999998766544 5566778889999999999964 23
Q ss_pred CCeeecCCCCcc
Q 040540 526 APIIHCEGEDSV 537 (669)
Q Consensus 526 ~~i~h~d~~~~~ 537 (669)
.+++|+|+++..
T Consensus 108 ~~i~H~Dl~~~N 119 (155)
T cd05120 108 LVLCHGDLHPGN 119 (155)
T ss_pred eEEEecCCCcce
Confidence 579999999764
No 500
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=96.43 E-value=0.0096 Score=51.77 Aligned_cols=81 Identities=16% Similarity=0.139 Sum_probs=29.5
Q ss_pred ccCCCCCCEEeCCCCcCcccCCcccCCCCCCCEEEccCCcCCccCCccccCCcccccccccccCccccCCcccCCCCCCC
Q 040540 71 FGNLSFLVSLDISENNFHGHLPKELGQLRRLRVMSLAYNKLSGSFPSWIGVLSKLRILRLDYNNFTGPIPNSLFNLSRLE 150 (669)
Q Consensus 71 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 150 (669)
|.+.++|+.+.+.. .+.......|.++++|+.+.+..+ +...-...|.+.++|+.+.+.+ .+.......|..+++|+
T Consensus 8 F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~ 84 (129)
T PF13306_consen 8 FYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLK 84 (129)
T ss_dssp TTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTEC
T ss_pred HhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccccc
Confidence 44445555555543 343333444555555555555443 3322233445554555555543 22222222333344444
Q ss_pred eeec
Q 040540 151 MLRA 154 (669)
Q Consensus 151 ~L~l 154 (669)
.+.+
T Consensus 85 ~i~~ 88 (129)
T PF13306_consen 85 NIDI 88 (129)
T ss_dssp EEEE
T ss_pred cccc
Confidence 4444
Done!