Your job contains 1 sequence.
>040546
MVLLQQLERGVKPVQSYYNSMTYLKQLSLTQGSISSNIICYPSLISKPISKVEAKELAAK
KHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALCQVH
EECVFPSEANELSLRNCNRDRGMLKVTLSCEDQPELMSDLSRALRSVKGRLVRAEMVPVG
GRIKCVLWVQGFKGNEGMVMLKRALNLVIDRPVSPGNSSKLRFYH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040546
(225 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2063203 - symbol:AT2G41130 "AT2G41130" species... 265 6.1e-23 1
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 262 1.3e-22 1
TAIR|locus:2103560 - symbol:AT3G56770 "AT3G56770" species... 262 1.3e-22 1
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 251 1.9e-21 1
UNIPROTKB|Q7F7Z2 - symbol:Os01g0159800 "ESTs C26093(C1162... 238 4.4e-20 1
UNIPROTKB|Q6ZA99 - symbol:P0431A03.9 "Os08g0432800 protei... 234 1.2e-19 1
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 156 1.7e-19 2
UNIPROTKB|Q7XZF8 - symbol:OSJNBb0033J23.9 "Helix-loop-hel... 194 8.1e-19 2
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro... 215 1.2e-17 1
UNIPROTKB|Q9FTQ1 - symbol:P0665D10.21 "DNA binding protei... 215 1.2e-17 1
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 207 8.6e-17 1
UNIPROTKB|Q6ZJC8 - symbol:OJ1666_A04.16 "Os08g0477900 pro... 202 2.9e-16 1
UNIPROTKB|Q75IR0 - symbol:OSJNBb0099P06.13 "Putative unch... 190 5.4e-15 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 139 1.7e-07 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 106 3.4e-07 2
TAIR|locus:504956068 - symbol:AT2G31215 "AT2G31215" speci... 114 1.3e-06 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 128 6.0e-06 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 131 6.3e-06 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 125 1.4e-05 1
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 126 1.6e-05 1
TAIR|locus:2042486 - symbol:AT2G31220 "AT2G31220" species... 124 2.6e-05 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 115 3.1e-05 2
UNIPROTKB|Q6ZBQ2 - symbol:P0605H02.26 "BHLH protein famil... 112 3.2e-05 2
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 123 3.4e-05 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 123 3.5e-05 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 124 3.6e-05 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 121 4.0e-05 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 123 4.6e-05 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 121 8.1e-05 1
UNIPROTKB|Q3ZC46 - symbol:ID2 "DNA-binding protein inhibi... 98 8.4e-05 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 118 8.6e-05 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 111 8.8e-05 2
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 119 9.2e-05 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 117 0.00010 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 116 0.00011 1
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 120 0.00011 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 117 0.00012 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 114 0.00014 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 119 0.00015 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 116 0.00018 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 118 0.00018 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 115 0.00020 1
UNIPROTKB|Q2VIU1 - symbol:ID2 "DNA-binding protein inhibi... 97 0.00022 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 113 0.00024 1
UNIPROTKB|Q6Z339 - symbol:B1121A12.20 "Os02g0726700 prote... 113 0.00032 1
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 116 0.00033 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 116 0.00033 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 106 0.00039 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 108 0.00039 1
UNIPROTKB|Q6YW41 - symbol:B1131G07.17 "Basic helix-loop-h... 116 0.00044 1
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 113 0.00046 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 111 0.00048 1
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 110 0.00053 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 101 0.00054 2
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 114 0.00056 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 112 0.00058 1
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 114 0.00060 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 113 0.00062 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 109 0.00080 1
UNIPROTKB|Q5JNS0 - symbol:P0706B05.43 "Os01g0293100 prote... 110 0.00084 1
UNIPROTKB|Q02363 - symbol:ID2 "DNA-binding protein inhibi... 95 0.00091 1
UNIPROTKB|Q4R5J7 - symbol:ID2 "DNA-binding protein inhibi... 95 0.00091 1
UNIPROTKB|Q5RCH7 - symbol:ID2 "DNA-binding protein inhibi... 95 0.00091 1
FB|FBgn0017578 - symbol:Max "Max" species:7227 "Drosophil... 101 0.00093 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 111 0.00097 1
TAIR|locus:2038510 - symbol:AT1G06170 "AT1G06170" species... 110 0.00099 1
>TAIR|locus:2063203 [details] [associations]
symbol:AT2G41130 "AT2G41130" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009941
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC004261 EMBL:AK119059 EMBL:AY074639 IPI:IPI00526770
PIR:T02106 RefSeq:NP_181646.1 UniGene:At.37024
ProteinModelPortal:O80674 SMR:O80674 EnsemblPlants:AT2G41130.1
GeneID:818712 KEGG:ath:AT2G41130 TAIR:At2g41130 eggNOG:NOG239121
HOGENOM:HOG000006083 InParanoid:O80674 OMA:RERIKSH PhylomeDB:O80674
ProtClustDB:CLSN2683662 Genevestigator:O80674 Uniprot:O80674
Length = 253
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 76/205 (37%), Positives = 113/205 (55%)
Query: 17 YYNSMTYLKQLSLTQGSISSNIICYPSLISKPISKVEAKE--LAA-KKHSEAERRRRLRI 73
Y S Y+ + GS SS YP IS I + A++ LAA + H EAERRRR RI
Sbjct: 24 YCVSGDYMTTMQSLCGSSSSTSSYYPLAISG-IGETMAQDRALAALRNHKEAERRRRERI 82
Query: 74 NDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALCQVHEECVFPSEANELS 133
N + LR +L K DKA++LAK ++ VREL++ E ++ + PSE +E+S
Sbjct: 83 NSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTLETSD----SDQTLLPSETDEIS 138
Query: 134 LRN----CNRDRGMLKVTLSCEDQPELMSDLSRALRSVKGRLVRAEMVPVGGRIKCVLWV 189
+ + N + K +L CED+ +L+ DL L+S+ + +RAEMV +GGR + VL V
Sbjct: 139 VLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVV 198
Query: 190 QGFK---GNEGMVMLKRALNLVIDR 211
K G E + L+ AL +++R
Sbjct: 199 AADKEMHGVESVHFLQNALKSLLER 223
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 61/146 (41%), Positives = 97/146 (66%)
Query: 52 VEAKELAAKK-HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTV 110
++AK LAA K HSEAERRRR RIN+ LR ILPN K DKAS+LA+ I+ V+EL+R
Sbjct: 167 MDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKR-- 224
Query: 111 REQKALCQVHEECVFPSEANELSLRNCNRD-----RGMLKVTLSCEDQPELMSDLSRALR 165
E + + + + P+E++EL++ + R ++K +L CED+ +L+ D+ + L+
Sbjct: 225 -ETSVISETN---LVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLK 280
Query: 166 SVKGRLVRAEMVPVGGRIKCVLWVQG 191
+++ + ++AE+ VGGR+K VL+V G
Sbjct: 281 AMRLKTLKAEITTVGGRVKNVLFVTG 306
>TAIR|locus:2103560 [details] [associations]
symbol:AT3G56770 "AT3G56770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL390921 HOGENOM:HOG000006083 ProtClustDB:CLSN2683662
IPI:IPI00540753 PIR:T51265 RefSeq:NP_191236.1 UniGene:At.53958
ProteinModelPortal:Q9LET0 SMR:Q9LET0 EnsemblPlants:AT3G56770.1
GeneID:824844 KEGG:ath:AT3G56770 TAIR:At3g56770 eggNOG:NOG237033
InParanoid:Q9LET0 OMA:RRIIFKV PhylomeDB:Q9LET0
Genevestigator:Q9LET0 Uniprot:Q9LET0
Length = 230
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 74/194 (38%), Positives = 116/194 (59%)
Query: 29 LTQGSISSNIICYPSLISKPISKV-EAKELAA-KKHSEAERRRRLRINDQYDNLRKILPN 86
LT G +S+ + S P + V E K LA+ + H EAER+RR RIN + LRK+L
Sbjct: 14 LTGGLCASSTSTTVTSSSDPFATVYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSC 73
Query: 87 LVKVDKASVLAKTIKTVRELQRTVREQKALCQVHEECVFPSEANELSLRN---CNR--DR 141
K DK+++LAK ++ V+EL+ Q+ L ++ +E + PSE +E+S+ N C+R DR
Sbjct: 74 NSKTDKSTLLAKVVQRVKELK-----QQTL-EITDETI-PSETDEISVLNIEDCSRGDDR 126
Query: 142 GML-KVTLSCEDQPELMSDLSRALRSVKGRLVRAEMVPVGGRIKCVLWVQGFKGNEGMV- 199
++ KV+ CED+PEL+ DL L+S++ + A+M VGGR + VL V K + G+
Sbjct: 127 RIIFKVSFCCEDRPELLKDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQS 186
Query: 200 --MLKRALNLVIDR 211
L+ AL +++R
Sbjct: 187 VNFLQNALKSLLER 200
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 61/142 (42%), Positives = 92/142 (64%)
Query: 52 VEAKELAAKK-HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTV 110
++AK LAA K HSEAERRRR RIN LR ILPN K DKAS+LA+ I+ ++EL+R
Sbjct: 125 MDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQT 184
Query: 111 REQKALCQVHEECVFPSEANELSLRNC-NRDRGMLKVTLS--CEDQPELMSDLSRALRSV 167
+ QV P+E ++L++ + N + G L + S C+D+ +LM D+ AL+S+
Sbjct: 185 SQITDTYQV------PTECDDLTVDSSYNDEEGNLVIRASFCCQDRTDLMHDVINALKSL 238
Query: 168 KGRLVRAEMVPVGGRIKCVLWV 189
+ R ++AE+ VGGR+K +L++
Sbjct: 239 RLRTLKAEIATVGGRVKNILFL 260
>UNIPROTKB|Q7F7Z2 [details] [associations]
symbol:Os01g0159800 "ESTs C26093(C11622)" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 OMA:QPETISD ProtClustDB:CLSN2691085 EMBL:AP002539
RefSeq:NP_001042087.1 UniGene:Os.1443
EnsemblPlants:LOC_Os01g06640.1 EnsemblPlants:LOC_Os01g06640.2
GeneID:4324065 KEGG:osa:4324065 Uniprot:Q7F7Z2
Length = 258
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 71/225 (31%), Positives = 115/225 (51%)
Query: 6 QLERGVK--PVQSY--YNSMTYLKQLSLTQGSISSNIICYPSLISKPISKVEAKELAAKK 61
QL+ G K +Q Y N Y + L + + S+ P + S S A E A K
Sbjct: 8 QLQEGKKLQELQPYDGCNPSVYRGPILLPRQANSAPPAVPPEMSSSSGSGRSATEARALK 67
Query: 62 -HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE--QKALC- 117
HSEAERRRR RIN LR+++P+ ++DKA++LA+ + V++L+R E Q+
Sbjct: 68 IHSEAERRRRERINAHLTTLRRMIPDTKQMDKATLLARVVDQVKDLKRKASEITQRTPLP 127
Query: 118 ----QVHEECVFPSEANELSLRNCNRDRGMLKVTLSCEDQPELMSDLSRALRSVKGRLVR 173
+V EC A + N +K ++SC+D+P+L++ ++ A ++ R VR
Sbjct: 128 PETNEVSIECFTGDAATAATTVAGNHKTLYIKASISCDDRPDLIAGITHAFHGLRLRTVR 187
Query: 174 AEMVPVGGRIKCVLWV---QGFKGNEGMVMLKRALNLVIDRPVSP 215
AEM +GGR++ V + +G G + LK A+ + + SP
Sbjct: 188 AEMTSLGGRVQHVFILCREEGIAGGVSLKSLKEAVRQALAKVASP 232
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 59/147 (40%), Positives = 89/147 (60%)
Query: 52 VEAKELAAKK-HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQR-- 108
++AK LAA + HSEAERRRR RIN LR +LPN K DKAS+LA+ I+ V+EL+R
Sbjct: 114 MDAKALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQT 173
Query: 109 -TVREQKAL---CQVHEECVFPSEANELSLRNCNRDRGML--KVTLSCEDQPELMSDLSR 162
+ E A + P+E +EL + + G L + +L CED+ +L+ ++R
Sbjct: 174 SAMMEDGAAGGEAAAAPVVLLPTEDDELEVDAAADEGGRLVARASLCCEDRADLIPGIAR 233
Query: 163 ALRSVKGRLVRAEMVPVGGRIKCVLWV 189
AL +++ R RAE+ +GGR++ VL +
Sbjct: 234 ALAALRLRARRAEIATLGGRVRSVLLI 260
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 156 (60.0 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 52 VEAKELAAKK-HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQR 108
++AK LAA + HSEAERRRR RIN LR +LPN K DKAS+LA+ I+ V+EL+R
Sbjct: 99 MDAKALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKR 156
Score = 124 (48.7 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 124 VFPSEANELSLRNCNRDRGMLKV--TLSCEDQPELMSDLSRALRSVKGRLVRAEMVPVGG 181
+ P+EA+EL++ G L V +L CED+P+L+ D++RAL +++ R RAE+ +GG
Sbjct: 192 LLPTEADELAVDAAVDAEGKLVVRASLCCEDRPDLIPDIARALAALRLRARRAEITTLGG 251
Query: 182 RIKCVLWV 189
R++ VL +
Sbjct: 252 RVRSVLLI 259
>UNIPROTKB|Q7XZF8 [details] [associations]
symbol:OSJNBb0033J23.9 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006083 OMA:RERIKSH EMBL:AC137507 STRING:Q7XZF8
EnsemblPlants:LOC_Os03g59670.1 Uniprot:Q7XZF8
Length = 268
Score = 194 (73.4 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 48/148 (32%), Positives = 82/148 (55%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALC 117
A++ H EAE+RRR RI D LR +L K+DKAS+LAK ++ VR+L++ +
Sbjct: 67 ASRNHREAEKRRRERIKSHLDRLRAVLACDPKIDKASLLAKAVERVRDLKQRMAGIGEAA 126
Query: 118 QVHEECVFPSEANEL--------SLRNCNRDRGMLKVTLSCEDQPELMSDLSRALRSVKG 169
H +FP+E +E+ + + + ++ C+D+ +L+ +L LR+++
Sbjct: 127 PAH---LFPTEHDEIVVLASGGGGVGGAGGAAAVFEASVCCDDRCDLLPELIETLRALRL 183
Query: 170 RLVRAEMVPVGGRIKCVLWVQGFKGNEG 197
R +RAEM +GGR++ VL + G G
Sbjct: 184 RTLRAEMATLGGRVRNVLVLARDAGGAG 211
Score = 46 (21.3 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 195 NEGMVMLKRALNLVIDRP-VSPGNSSKLR 222
N+G LK AL +++RP + G+ K R
Sbjct: 228 NDGGDFLKEALRALVERPGAAAGDRPKRR 256
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 51/133 (38%), Positives = 77/133 (57%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALC 117
A + HSEAER+RR RIN D LR ++P+ ++DKA++L + ++ VR+L+ A+
Sbjct: 28 ARRSHSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLRSEAAGSAAVV 87
Query: 118 QVHEECVFPSEANELSLRNCNRDRG------MLKVTLSCEDQPELMSDLSRALRSVKGRL 171
+ V E E+ + C+ D G +K ++ C D+P LMS+L A RSV R
Sbjct: 88 PGEGDEVVVEE-EEVEVEGCSCDAGERQAARRVKASVCCADRPGLMSELGDAERSVSARA 146
Query: 172 VRAEMVPVGGRIK 184
VRAE+ VGGR +
Sbjct: 147 VRAEIATVGGRTR 159
>UNIPROTKB|Q9FTQ1 [details] [associations]
symbol:P0665D10.21 "DNA binding protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002861 EMBL:AP002745 RefSeq:NP_001042409.1 UniGene:Os.26488
STRING:Q9FTQ1 GeneID:4324583 KEGG:osa:4324583 OMA:VRFTFLI
ProtClustDB:CLSN2691217 Uniprot:Q9FTQ1
Length = 267
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 58/172 (33%), Positives = 94/172 (54%)
Query: 53 EAKELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE 112
E +A K HSEAERRRR RIN LR ++P K+DKA++LA+ + V++L+
Sbjct: 73 EKAAMALKSHSEAERRRRERINAHLATLRTMVPCTDKMDKAALLAEVVGHVKKLK----- 127
Query: 113 QKALCQVHEECVFPSEANELSLRNCNRDRG------MLKVTLSCEDQPELMSDLSRALRS 166
A +V PS A+E+++ + G +L+ TLSC+D+ +L D+ RAL+
Sbjct: 128 -SAAARVGRRATVPSGADEVAVDEASATGGGGEGPLLLRATLSCDDRADLFVDVKRALQP 186
Query: 167 VKGRLVRAEMVPVGGRIKCVLWVQ-GFKGNEG---MVMLKRALNLVIDRPVS 214
+ +V +E+ +GGR++ V G +G M ++ AL V+D+ S
Sbjct: 187 LGLEVVGSEVTTLGGRVRLAFLVSCGSRGGAAAAAMASVRHALQSVLDKASS 238
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 48/143 (33%), Positives = 85/143 (59%)
Query: 49 ISKVEAKELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQR 108
+ +E E ++ H AE+RRR RIN LRK++PN K+DKA++LA I+ V+EL++
Sbjct: 54 VGGIEKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQ 113
Query: 109 TVREQKALCQVHEECVFPSEANELSLR-------NCNRDRGMLKVTLSCEDQPELMSDLS 161
E + ++ P+EA+E++++ N + + K + CEDQPE +S++
Sbjct: 114 KAAESP----IFQD--LPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEII 167
Query: 162 RALRSVKGRLVRAEMVPVGGRIK 184
R L ++ ++AE++ VGGR++
Sbjct: 168 RVLTKLQLETIQAEIISVGGRMR 190
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 55/148 (37%), Positives = 81/148 (54%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALC 117
A + HSEAER+RR RIN LR ++P+ ++DKA++L + ++ VREL+ R A
Sbjct: 19 AVRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELR--CRADDAT- 75
Query: 118 QVHEECVFPSEANELSLRNCNRDRG------------------MLKVTLSCEDQPELMSD 159
+ V P E +E+ + + + D G ++ + C D+P LMSD
Sbjct: 76 -EGADVVVPGEGDEVGVEDEDDDEGERDEGCYVVGGGDRRWRRRVRAWVCCADRPGLMSD 134
Query: 160 LSRALRSVKGRLVRAEMVPVGGRIKCVL 187
L RA+RSV R VRAE+ VGGR + VL
Sbjct: 135 LGRAVRSVSARPVRAEVATVGGRTRSVL 162
>UNIPROTKB|Q75IR0 [details] [associations]
symbol:OSJNBb0099P06.13 "Putative uncharacterized protein
OSJNBb0099P06.13" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR002912
InterPro:IPR011598 Pfam:PF00010 Pfam:PF01842 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0016597 GO:GO:0008152
EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC124144
EMBL:AC134341 EMBL:AK110619 RefSeq:NP_001054739.1 UniGene:Os.56950
EnsemblPlants:LOC_Os05g07120.1 EnsemblPlants:LOC_Os05g07120.2
GeneID:4337905 KEGG:osa:4337905 eggNOG:NOG309133
HOGENOM:HOG000241234 OMA:VSCDDRP ProtClustDB:CLSN2691085
Uniprot:Q75IR0
Length = 271
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 47/137 (34%), Positives = 77/137 (56%)
Query: 54 AKELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQ 113
A+ A HSEAERRRR RIN LR+ILP+ ++DKA++LA + V+ L+ E
Sbjct: 62 AQATAMTIHSEAERRRRERINAHLATLRRILPDAKQMDKATLLASVVNQVKHLKTRATEA 121
Query: 114 KALCQVHEECVFPSEANELSLR------NCNRDRGMLKVTLSCEDQPELMSDLSRALRSV 167
P EANE++++ + R ++ T+SC+D+P L++D++ R +
Sbjct: 122 TTPSTA---ATIPPEANEVTVQCYAGGEHTAAARTYVRATVSCDDRPGLLADIAATFRRL 178
Query: 168 KGRLVRAEMVPVGGRIK 184
+ R + A+M +GGR +
Sbjct: 179 RLRPLSADMSCLGGRTR 195
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 139 (54.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 38/137 (27%), Positives = 72/137 (52%)
Query: 54 AKELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR-- 111
A A +H AER+RR +IN ++ L ++P L K+DKA++L+ +RELQ ++
Sbjct: 123 AAAYAQLEHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKAL 182
Query: 112 EQKALCQVHEECVF-PSEAN---------ELSLRNCNRDRGMLKVTLSCEDQPELMSDLS 161
E++A +V E + PS A E+ +R C+ ++ V + CE+ ++ +
Sbjct: 183 EEQAAARVTEAAMATPSPARAMNHLPVPPEIEVR-CSPTNNVVMVRIHCENGEGVIVRIL 241
Query: 162 RALRSVKGRLVRAEMVP 178
+ + R++ A ++P
Sbjct: 242 AEVEEIHLRIINANVMP 258
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 106 (42.4 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 59 AKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQ----RTVREQK 114
A K+ ER RR ++N++ LR ++PN+ K+DKAS++ I+ ++ LQ + +RE
Sbjct: 91 ANKNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQMLREVA 150
Query: 115 ALCQVHEECVFPSEAN 130
AL P+ AN
Sbjct: 151 ALESAAAASAAPAAAN 166
Score = 71 (30.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 23/92 (25%), Positives = 47/92 (51%)
Query: 126 PSEANELSLRNCNRDRGMLKVTLSCEDQPELMSDLSRALRSVKGRLVRAEMVPVGGRIKC 185
P E EL + DR +L V+++C + + M+ + RAL ++ R++ A + V G
Sbjct: 216 PVEIQELRVSEVG-DR-VLVVSVTCSKRRDAMARVCRALEELRLRVITANITSVAGCPMH 273
Query: 186 VLWVQGFKGNEGMVMLKRALNLVIDRPVSPGN 217
L+V+ + V +K+ + + + V+ G+
Sbjct: 274 TLFVE--VDHMDSVQMKQMVEAALSQLVATGS 303
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 114 (45.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 37/125 (29%), Positives = 59/125 (47%)
Query: 46 SKPISKVEAKELAAKKHSEA---ERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKT 102
+K + +A+E K S ER RR ND++ +L+ ++PN K +AS++ I
Sbjct: 5 TKKNERFKAEEGKGSKKSRTFLTERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVY 64
Query: 103 VRELQRTVREQKALCQVHEECVFPSEANELSLRNCNRDRGMLKVTLSCEDQPELMSDLSR 162
+ ELQR V E K L + ++C + N + + N N G K+ + L R
Sbjct: 65 INELQRLVSELKYLVE-KKKC--GARHNNIEVDNKNTIYGTSKIEHPFSKNKNTFNCLIR 121
Query: 163 ALRSV 167
LR V
Sbjct: 122 TLRFV 126
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 128 (50.1 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 25/59 (42%), Positives = 43/59 (72%)
Query: 54 AKELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE 112
A + K H +ERRRR ++N+ + L+ ++P++ KVDKAS+L++TI ++EL+R V+E
Sbjct: 181 AGSCSIKNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQE 239
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 131 (51.2 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 29/91 (31%), Positives = 57/91 (62%)
Query: 30 TQGSISSNIICYPSLISKPISKVEAKELAAK--KHSEAERRRRLRINDQYDNLRKILPNL 87
+QG + I P + K +++ E + H+ E++RR ++N+++ LRKI+P++
Sbjct: 408 SQGMLKKIIFDVPRVHQKEKLMLDSPEARDETGNHAVLEKKRREKLNERFMTLRKIIPSI 467
Query: 88 VKVDKASVLAKTIKTVRELQRTVREQKALCQ 118
K+DK S+L TI+ ++EL+R V+E ++ C+
Sbjct: 468 NKIDKVSILDDTIEYLQELERRVQELES-CR 497
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 125 (49.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/71 (40%), Positives = 47/71 (66%)
Query: 42 PSLISKPISKVEAKEL-AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTI 100
PS S P S+ +K AA+ H+ +E+RRR RIN++ L+ ++PN K DKAS+L + I
Sbjct: 181 PSSKSGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAI 240
Query: 101 KTVRELQRTVR 111
+ +++LQ V+
Sbjct: 241 EYLKQLQLQVQ 251
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 126 (49.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 33/109 (30%), Positives = 61/109 (55%)
Query: 59 AKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALCQ 118
A H EAER+RR ++N ++ LR ++PN+ K+DKAS+LA I + ++Q+ +R + Q
Sbjct: 318 ALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQ 377
Query: 119 VHEECVFPSEANELSLRNCNRDRGM--LKVTLSCEDQPELMSDLSRALR 165
+ + E+N+++ + + V LSC + +S + + LR
Sbjct: 378 IMKR----RESNQITPAEVDYQQRHDDAVVRLSCPLETHPVSKVIQTLR 422
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 124 (48.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 22/56 (39%), Positives = 38/56 (67%)
Query: 63 SEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALCQ 118
S ER RR+ ND++ +L+ ++PN K+D+AS++ + I ++EL RT+ E K L +
Sbjct: 249 SPTERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEFKMLVE 304
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 115 (45.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR 111
A K+ AERRRR R+ND+ LR ++P + K+D+ S+L TI V+EL ++
Sbjct: 193 APSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIK 246
Score = 44 (20.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 139 RDRGMLKVTLSCEDQPELMSDLSRALRSV 167
R+ G ++ ++C PEL+ AL ++
Sbjct: 299 RENGSTRIEMACAAIPELLPSTLAALEAL 327
>UNIPROTKB|Q6ZBQ2 [details] [associations]
symbol:P0605H02.26 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 ProtClustDB:CLSN2697427 EMBL:HQ858865 EMBL:AP004620
EMBL:AK100183 RefSeq:NP_001062109.1 UniGene:Os.5093 STRING:Q6ZBQ2
EnsemblPlants:LOC_Os08g38210.1 GeneID:4345899 KEGG:osa:4345899
OMA:KPTHDFL Uniprot:Q6ZBQ2
Length = 508
Score = 112 (44.5 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 61 KHSEAERRRRLRINDQYDNLRKILP-NLVKVDKASVLAKTIKTVRELQRTVRE 112
KHS E+RRR +IND++ LR +LP N K DKAS L + I+ +R LQ V++
Sbjct: 225 KHSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQK 277
Score = 51 (23.0 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 114 KALCQVHEECVFPSEANELSLRNC----NRDRGMLKVTLSCEDQ--PELMSDLSRALRS 166
K Q H + V PS A ++ NC N D + + T+S Q EL++ L+ AL +
Sbjct: 381 KVTSQPHAQLVRPSPAENHTV-NCDKLNNSDLAIDEGTISLSSQYSQELLNKLNHALEN 438
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 123 (48.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 24/53 (45%), Positives = 40/53 (75%)
Query: 60 KKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE 112
K H +ERRRR ++N+ + L+ +LP++ KVDKAS+LA+TI ++ L++ V+E
Sbjct: 377 KSHVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKE 429
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 123 (48.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 24/59 (40%), Positives = 42/59 (71%)
Query: 60 KKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALCQ 118
K H +ERRRR ++ + + L+ ++P++ KVDKAS+LA+TI ++EL++ V E ++ Q
Sbjct: 243 KNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEELESSSQ 301
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 124 (48.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 37/123 (30%), Positives = 70/123 (56%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR----EQ---- 113
H EAER+RR ++N ++ LR ++PN+ K+DKAS+L I ++ELQ V+ E+
Sbjct: 396 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTD 455
Query: 114 KALCQVHEECVFPSEANELSLRNCNRDRGMLKVTLSCEDQPELMSDLSRALRSVKGRLVR 173
K+L + + V E+ E+ ++ N + +++V + P S + +A+R+ L+
Sbjct: 456 KSLSESNTITV--EESPEVDIQAMNEEV-VVRVISPLDSHPA--SRIIQAMRNSNVSLME 510
Query: 174 AEM 176
A++
Sbjct: 511 AKL 513
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 121 (47.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALC 117
AA H+E+ERRRR RIN + L+K+LP K DK S+L I+ +++LQ V+
Sbjct: 167 AAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMSLRA 226
Query: 118 QVHEECVFP 126
+ ++ + P
Sbjct: 227 NLPQQMMIP 235
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 123 (48.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 48/150 (32%), Positives = 72/150 (48%)
Query: 61 KHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE-QKAL--C 117
K+ EAER+RR ++N LR ++PN+ K+D+AS+L I + LQ+ V+E Q L
Sbjct: 285 KNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQDELEDN 344
Query: 118 QVHEEC--VFPSEANELSLRNCNRDRGMLKVTLSCEDQPELMSDLSRALRSVKGRLVRAE 175
VH + V SL + D S + QP L S + RS K + +
Sbjct: 345 HVHHKPPDVLIDHPPPASLVGLDNDDA--SPPNSHQQQPPLAVSGSSSRRSNKDPAMTDD 402
Query: 176 MVPVGG----RIKCVLWVQGFKGNEGMVML 201
V GG R++ L V+ +GNE V +
Sbjct: 403 KVGGGGGGGHRMEPQLEVRQVQGNELFVQV 432
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 121 (47.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 49/182 (26%), Positives = 85/182 (46%)
Query: 32 GSISSNIICYPSLISK--PISKVEAKELAAKKHSEAERRRRLRINDQYDNLRKILPNLVK 89
G + S C + + P K ++ + + K+ AERRRR ++ND+ LR ++P + K
Sbjct: 283 GRVDSGSDCSDQIDDEDDPKYKKKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITK 342
Query: 90 VDKASVLAKTIKTVRELQRTVREQKALCQVHEECVFPSEANE--LSLRNCNRDRGMLKVT 147
+D+AS+L I V+ELQ +E + + + E S + +SL N G
Sbjct: 343 LDRASILGDAINYVKELQNEAKELQDELEENSETEDGSNRPQGGMSL-NGTVVTGF-HPG 400
Query: 148 LSCEDQ-PELMSDLSRALRSVKGRLV--RAEMVPVGGRIKCVLWVQGFKGNEGMVMLKRA 204
LSC P + D+ + KG+ + + ++ + GR V + +K G L A
Sbjct: 401 LSCNSNVPSVKQDVDLENSNDKGQEMEPQVDVAQLDGREFFVKVICEYKPG-GFTRLMEA 459
Query: 205 LN 206
L+
Sbjct: 460 LD 461
>UNIPROTKB|Q3ZC46 [details] [associations]
symbol:ID2 "DNA-binding protein inhibitor ID-2"
species:9913 "Bos taurus" [GO:0033598 "mammary gland epithelial
cell proliferation" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0048663 "neuron fate commitment" evidence=ISS]
[GO:0060749 "mammary gland alveolus development" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:2000178 "negative regulation of
neural precursor cell proliferation" evidence=ISS] [GO:0090398
"cellular senescence" evidence=ISS] [GO:0071158 "positive
regulation of cell cycle arrest" evidence=ISS] [GO:0061031
"endodermal digestive tract morphogenesis" evidence=ISS]
[GO:0061030 "epithelial cell differentiation involved in mammary
gland alveolus development" evidence=ISS] [GO:0048661 "positive
regulation of smooth muscle cell proliferation" evidence=ISS]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=ISS]
[GO:0045777 "positive regulation of blood pressure" evidence=ISS]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=ISS] [GO:0010629 "negative regulation of gene expression"
evidence=ISS] [GO:0010628 "positive regulation of gene expression"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0071285 "cellular response to lithium ion" evidence=IEA]
[GO:0060612 "adipose tissue development" evidence=IEA] [GO:0048715
"negative regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048541 "Peyer's patch
development" evidence=IEA] [GO:0048469 "cell maturation"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0045651 "positive regulation of
macrophage differentiation" evidence=IEA] [GO:0045648 "positive
regulation of erythrocyte differentiation" evidence=IEA]
[GO:0045600 "positive regulation of fat cell differentiation"
evidence=IEA] [GO:0045578 "negative regulation of B cell
differentiation" evidence=IEA] [GO:0044325 "ion channel binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043392 "negative regulation of DNA binding" evidence=IEA]
[GO:0043353 "enucleate erythrocyte differentiation" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0019216
"regulation of lipid metabolic process" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0009649
"entrainment of circadian clock" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0003166 "bundle of His development"
evidence=IEA] [GO:0001779 "natural killer cell differentiation"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
InterPro:IPR026052 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005829 GO:GO:0005634 GO:GO:0045892 GO:GO:0045893
GO:GO:0043234 GO:GO:0071158 GO:GO:0009649 GO:GO:0048661
GO:GO:0045665 GO:GO:0045777 GO:GO:0060612 GO:GO:0019216
GO:GO:0045600 GO:GO:0000122 GO:GO:0045648 GO:GO:0048541
GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001656
GO:GO:0045668 GO:GO:0014003 GO:GO:0048663 GO:GO:0090398
GO:GO:0048469 GO:GO:2000045 GO:GO:0048711 GO:GO:0048715
GO:GO:0071285 GO:GO:2000178 GO:GO:0045651 GO:GO:0021772
GO:GO:0033598 GO:GO:0043353 GO:GO:0043392 eggNOG:NOG76382
GeneTree:ENSGT00390000000908 KO:K04680 PANTHER:PTHR11723
GO:GO:0048557 GO:GO:0061031 GO:GO:0045578 GO:GO:0061030
GO:GO:0001779 HOVERGEN:HBG009009 HOGENOM:HOG000234788 CTD:3398
EMBL:BC102921 IPI:IPI00688438 RefSeq:NP_001029403.1
UniGene:Bt.49464 ProteinModelPortal:Q3ZC46 STRING:Q3ZC46
Ensembl:ENSBTAT00000028235 GeneID:505025 KEGG:bta:505025
InParanoid:Q3ZC46 OMA:NVSKMEI OrthoDB:EOG4MPHRM NextBio:20866942
GO:GO:0003166 Uniprot:Q3ZC46
Length = 134
Score = 98 (39.6 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 28/95 (29%), Positives = 48/95 (50%)
Query: 73 INDQYDNLRKILPNLV---KVDKASVLAKTIKTVRELQRTVREQKALCQVHEECVFPSEA 129
+ND Y L++++P++ KV K +L I + +LQ + + +H + S+A
Sbjct: 39 MNDCYSKLKELVPSIPQNKKVSKMEILQHVIDYILDLQIALDSHPTIVSLHHQRPGQSQA 98
Query: 130 NELSLRNCNRDRGMLKVTLSCEDQPELMSDLSRAL 164
+ L N D +L + S E ELMS+ S+AL
Sbjct: 99 SRTPLTTLNTDISILSLQAS-EFPSELMSNDSKAL 132
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 118 (46.6 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 31/93 (33%), Positives = 50/93 (53%)
Query: 15 QSYYNSMTYLKQLSLTQGSISSNI-ICYPSLISKPISKVEAKELAAKKHSEAERRRRLRI 73
+++ N M+Y L + S S ++ C K K+E + K+ AERRRR R+
Sbjct: 134 ENFNNPMSYPSPLMESDQSKSFSVGYCGGETNKKKSKKLEGQP---SKNLMAERRRRKRL 190
Query: 74 NDQYDNLRKILPNLVKVDKASVLAKTIKTVREL 106
ND+ LR I+P + K+D+ S+L I ++EL
Sbjct: 191 NDRLSMLRSIVPKISKMDRTSILGDAIDYMKEL 223
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 111 (44.1 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 59 AKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE 112
A+ H AER+RR ++ ++ L ++P L K+DKASVL IK ++ LQ +V+E
Sbjct: 124 AQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKE 177
Score = 41 (19.5 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 193 KGNEGMVMLKRALNLVIDRPVSPGNSS 219
K E +V++K++ +LV+D P +SS
Sbjct: 185 KTMESVVLVKKS-SLVLDENHQPSSSS 210
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 119 (46.9 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 38/117 (32%), Positives = 61/117 (52%)
Query: 61 KHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE-QKALCQV 119
K+ AERRRR R+ND+ LR I+P + K+D+ S+L TI V+EL ++ ++ +
Sbjct: 182 KNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTLEEEIGVT 241
Query: 120 HEEC-----VFPSEA---NELSLRNC------NRDRGMLKVTLSCEDQPE-LMSDLS 161
EE + S + NE+ +RN NR G ++ + C P L+S +S
Sbjct: 242 PEELDLLNTMKDSSSGNNNEMLVRNSTKFDVENRGSGNTRIEICCPANPGVLLSTVS 298
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 117 (46.2 bits), Expect = 0.00010, P = 0.00010
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR 111
H AERRRR +IN ++ L ++P L K+DKA++L +K V+ELQ V+
Sbjct: 168 HIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVK 217
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 116 (45.9 bits), Expect = 0.00011, P = 0.00011
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 31 QGSISSNIICYPSLISKPISKVEAKE-LAAKKHSEAERRRRLRINDQYDNLRKILPNLVK 89
QG++S+ P + KP +V A+ A HS AER RR RI ++ +L++++PN K
Sbjct: 82 QGTVSTTSA--PVVRQKP--RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK 137
Query: 90 VDKASVLAKTIKTVRELQRTVR 111
DKAS+L + I+ VR LQ V+
Sbjct: 138 TDKASMLDEIIEYVRFLQLQVK 159
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 24/58 (41%), Positives = 41/58 (70%)
Query: 55 KELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE 112
+E K H +ERRRR ++N+ + L+ I+P++ KVDKAS+L +TI ++ L++ V+E
Sbjct: 386 QESGIKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVLEKRVKE 443
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 29/82 (35%), Positives = 51/82 (62%)
Query: 41 YPSLISKPISKVEAKELAA-----KKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASV 95
Y ++++ ++K A + ++H AER+RR +++ ++ L KI+P L K+DKASV
Sbjct: 156 YDAMVAADVAKAPAAAASRPASQNQEHILAERKRREKLSQRFIALSKIVPGLKKMDKASV 215
Query: 96 LAKTIKTVRELQRTVR--EQKA 115
L IK V++LQ V+ E++A
Sbjct: 216 LGDAIKYVKQLQDQVKGLEEEA 237
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 37/136 (27%), Positives = 67/136 (49%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALCQVHE 121
H EAER+RR ++N ++ LR +P + ++DKAS+LA + + EL+R V +A +
Sbjct: 95 HVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRRRVERLEA--EARR 152
Query: 122 ECVFPSEA----------------NELSLRNCNRDRGMLKVTLSCEDQPELMSDLSRALR 165
+ PS A ++L +R RD +L++T + + + A+R
Sbjct: 153 APLAPSAAAAAAWAAGLGAGAIGRDDLVVRMIGRDAAILRLTTAAAAARHAPARMMCAVR 212
Query: 166 SVKGRLVRAEMVPVGG 181
++ + A + VGG
Sbjct: 213 ALNLAVQHASVARVGG 228
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 21/57 (36%), Positives = 44/57 (77%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALCQ 118
H+ +E++RR ++N+++ LR I+P++ K+DK S+L TI+ +++LQ+ V+E ++ C+
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES-CR 461
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 116 (45.9 bits), Expect = 0.00018, P = 0.00018
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 50 SKVEAKEL-AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQR 108
S V K AA H+++ER+RR +IN + L+K++PN K DKAS+L + I+ +++LQ
Sbjct: 205 SSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQA 264
Query: 109 TV 110
V
Sbjct: 265 QV 266
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 25/70 (35%), Positives = 46/70 (65%)
Query: 42 PSLISKPISKVEAKELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIK 101
P ++ K ++ + A+ H+ +ERRRR RIN++ L++++PN K+DKAS+L + I+
Sbjct: 297 PGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIE 356
Query: 102 TVRELQRTVR 111
++ LQ V+
Sbjct: 357 YLKTLQLQVQ 366
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 115 (45.5 bits), Expect = 0.00020, P = 0.00020
Identities = 21/54 (38%), Positives = 38/54 (70%)
Query: 59 AKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE 112
A++H AER+RR +IN ++ L ++P L K+DKA++L+ ++ V+E+Q + E
Sbjct: 190 AQEHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSE 243
>UNIPROTKB|Q2VIU1 [details] [associations]
symbol:ID2 "DNA-binding protein inhibitor ID-2"
species:9823 "Sus scrofa" [GO:0060749 "mammary gland alveolus
development" evidence=ISS] [GO:0071158 "positive regulation of cell
cycle arrest" evidence=ISS] [GO:0045665 "negative regulation of
neuron differentiation" evidence=ISS] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:2000178 "negative regulation of neural precursor cell
proliferation" evidence=ISS] [GO:0090398 "cellular senescence"
evidence=ISS] [GO:0061031 "endodermal digestive tract
morphogenesis" evidence=ISS] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=ISS] [GO:0048663 "neuron fate commitment" evidence=ISS]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=ISS] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=ISS] [GO:0045777 "positive regulation of
blood pressure" evidence=ISS] [GO:0010629 "negative regulation of
gene expression" evidence=ISS] [GO:0010628 "positive regulation of
gene expression" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=IEA] [GO:0071285 "cellular response to lithium ion"
evidence=IEA] [GO:0060612 "adipose tissue development"
evidence=IEA] [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0048711 "positive regulation of
astrocyte differentiation" evidence=IEA] [GO:0048541 "Peyer's patch
development" evidence=IEA] [GO:0048469 "cell maturation"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0045651 "positive regulation of
macrophage differentiation" evidence=IEA] [GO:0045648 "positive
regulation of erythrocyte differentiation" evidence=IEA]
[GO:0045600 "positive regulation of fat cell differentiation"
evidence=IEA] [GO:0045578 "negative regulation of B cell
differentiation" evidence=IEA] [GO:0044325 "ion channel binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043392 "negative regulation of DNA binding" evidence=IEA]
[GO:0043353 "enucleate erythrocyte differentiation" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0019216
"regulation of lipid metabolic process" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0009649
"entrainment of circadian clock" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0003166 "bundle of His development"
evidence=IEA] [GO:0001779 "natural killer cell differentiation"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
InterPro:IPR026052 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005829 GO:GO:0005634 GO:GO:0045892 GO:GO:0045893
GO:GO:0043234 GO:GO:0071158 GO:GO:0009649 GO:GO:0048661
GO:GO:0045665 GO:GO:0045777 GO:GO:0060612 GO:GO:0019216
GO:GO:0045600 GO:GO:0000122 GO:GO:0045648 GO:GO:0048541
GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001656
GO:GO:0045668 GO:GO:0014003 GO:GO:0048663 GO:GO:0090398
GO:GO:0048469 GO:GO:2000045 GO:GO:0048711 GO:GO:0048715
GO:GO:0071285 GO:GO:2000178 GO:GO:0045651 GO:GO:0021772
GO:GO:0033598 GO:GO:0043353 GO:GO:0043392 eggNOG:NOG76382
GeneTree:ENSGT00390000000908 KO:K04680 PANTHER:PTHR11723
GO:GO:0048557 GO:GO:0061031 GO:GO:0045578 GO:GO:0061030
GO:GO:0001779 HOVERGEN:HBG009009 HOGENOM:HOG000234788 CTD:3398
OMA:NVSKMEI OrthoDB:EOG4MPHRM GO:GO:0003166 EMBL:DQ116788
RefSeq:NP_001033054.1 UniGene:Ssc.14914 ProteinModelPortal:Q2VIU1
STRING:Q2VIU1 Ensembl:ENSSSCT00000009458 GeneID:654298
KEGG:ssc:654298 ArrayExpress:Q2VIU1 Uniprot:Q2VIU1
Length = 134
Score = 97 (39.2 bits), Expect = 0.00022, P = 0.00022
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 73 INDQYDNLRKILPNLV---KVDKASVLAKTIKTVRELQRTVREQKALCQVHEECVFPSEA 129
+ND Y L++++P++ KV K +L I + +LQ + + +H + S+A
Sbjct: 39 MNDCYSKLKELVPSIPQNKKVSKMEILQHVIDYILDLQIALDSHPTIVSLHHQRPGQSQA 98
Query: 130 NELSLRNCNRDRGMLKVTLSCEDQPELMSDLSRAL 164
+ L N D +L + S E ELMS S+AL
Sbjct: 99 SRTPLTTLNTDISILSLQAS-EFPSELMSSDSKAL 132
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 113 (44.8 bits), Expect = 0.00024, P = 0.00024
Identities = 26/70 (37%), Positives = 45/70 (64%)
Query: 42 PSLISKPISKVEAKELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIK 101
P+ ++P K + AA+ H+ +E+RRR RIN++ L+ ++PN K DKAS+L I+
Sbjct: 20 PTRPARPRGK---RSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIE 76
Query: 102 TVRELQRTVR 111
+++LQ V+
Sbjct: 77 YLKQLQLQVQ 86
>UNIPROTKB|Q6Z339 [details] [associations]
symbol:B1121A12.20 "Os02g0726700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
EMBL:AP008208 EMBL:AP005284 RefSeq:NP_001047993.1 UniGene:Os.52592
GeneID:4330593 KEGG:osa:4330593 ProtClustDB:CLSN2919237
Uniprot:Q6Z339
Length = 344
Score = 113 (44.8 bits), Expect = 0.00032, P = 0.00032
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 61 KHSEAERRRRLRINDQYDNLRKILPNL-VKVDKASVLAKTIKTVRELQRTVRE 112
KHS E+RRR +IND+ + LR++LP+ K DKAS L++ I+ +R LQ V++
Sbjct: 149 KHSATEQRRRTKINDRLEILRELLPHTDQKRDKASFLSEVIEYIRFLQEKVQK 201
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 59 AKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKA 115
A H EAER+RR ++N ++ LR ++PN+ K+DKAS+L + + EL ++ +A
Sbjct: 431 ALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEA 487
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 21/54 (38%), Positives = 39/54 (72%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKA 115
H EAER+RR ++N ++ +LR ++PN+ K+DKAS+L I + EL+ +++ ++
Sbjct: 416 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAES 469
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 106 (42.4 bits), Expect = 0.00039, P = 0.00039
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQ 107
+A+ H+ +ERRRR RIN++ L+++LPN K DK S+L + I ++ LQ
Sbjct: 14 SAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQ 63
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 108 (43.1 bits), Expect = 0.00039, P = 0.00039
Identities = 21/57 (36%), Positives = 41/57 (71%)
Query: 55 KELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR 111
+ + A+ H+ +E++RR +IN++ L+K++PN K DKAS+L + I+ +++LQ V+
Sbjct: 91 RNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 147
>UNIPROTKB|Q6YW41 [details] [associations]
symbol:B1131G07.17 "Basic helix-loop-helix (BHLH) family
protein-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP005797 ProteinModelPortal:Q6YW41
Gramene:Q6YW41 HOGENOM:HOG000083084 Uniprot:Q6YW41
Length = 745
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE----QKAL- 116
H +ERRRR R+N+ +++LR +LP K DKA+VLAKT++ + L + E +AL
Sbjct: 515 HMISERRRRERLNESFEHLRGLLPPGSKKDKATVLAKTLEYMNLLIAQISELEAKNRALQ 574
Query: 117 CQVHEECVFPSEANELSLRNCN 138
Q+H+ S + +R N
Sbjct: 575 TQIHQRANGSSSSRSSMIRTVN 596
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 113 (44.8 bits), Expect = 0.00046, P = 0.00046
Identities = 30/95 (31%), Positives = 51/95 (53%)
Query: 46 SKPISKVEAKELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRE 105
SK I + + + K ER RR +N++Y+ L+ ++P+ K D+AS+L I + E
Sbjct: 200 SKEIRR-KGRGKRKNKPFTTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINE 258
Query: 106 LQRTVREQKALCQVHEECVFPSEANELSLRNCNRD 140
L+R V E K L + + C + NE+ N N++
Sbjct: 259 LRRRVSELKYLVE-RKRCGGRHKNNEVDDNNNNKN 292
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 111 (44.1 bits), Expect = 0.00048, P = 0.00048
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 60 KKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE 112
K+H AER+RR ++N++ L +LP L K DKA+VL IK +++LQ V++
Sbjct: 131 KEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKK 183
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 110 (43.8 bits), Expect = 0.00053, P = 0.00053
Identities = 24/69 (34%), Positives = 43/69 (62%)
Query: 59 AKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQ---RTVREQKA 115
AK+H AER+RR ++++++ L +LP L K DK ++L I +++LQ RT++E+K
Sbjct: 117 AKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKE 176
Query: 116 LCQVHEECV 124
+ E +
Sbjct: 177 ATRQMESMI 185
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 101 (40.6 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKAL- 116
A+ K+ +ER RR ++N + LR ++PN+ K+DKASV+ +I ++EL + ++K L
Sbjct: 51 ASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQEL---IDQEKTLE 107
Query: 117 CQVHE 121
++ E
Sbjct: 108 AEIRE 112
Score = 43 (20.2 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 10/45 (22%), Positives = 20/45 (44%)
Query: 146 VTLSCEDQPELMSDLSRALRSVKGRLVRAEMVPVGGRIKCVLWVQ 190
V ++C + E M L + L S+ ++ R+ L++Q
Sbjct: 181 VCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQ 225
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 114 (45.2 bits), Expect = 0.00056, P = 0.00056
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKA 115
H EAER+RR ++N ++ +LR ++PN+ K+DKAS+L I + EL+ + QKA
Sbjct: 417 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKL--QKA 468
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 112 (44.5 bits), Expect = 0.00058, P = 0.00058
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 46 SKPISKVEAKEL--AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTV 103
++P + AK AA+ H+ +ERRRR RIN++ L++++P+ K DKAS+L + I+ +
Sbjct: 215 TRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYL 274
Query: 104 RELQRTVR 111
+ LQ V+
Sbjct: 275 KSLQMQVQ 282
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 114 (45.2 bits), Expect = 0.00060, P = 0.00060
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQ-RTVREQKALCQVH 120
H EAER+RR ++N ++ LR ++PN+ K+DKAS+L I + EL+ + V+ + Q+
Sbjct: 453 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIK 512
Query: 121 EE 122
+
Sbjct: 513 NQ 514
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 113 (44.8 bits), Expect = 0.00062, P = 0.00062
Identities = 24/54 (44%), Positives = 40/54 (74%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR 111
+A+ H+ +ERRRR RIN++ L++++PN KVDKAS+L + I+ ++ LQ V+
Sbjct: 344 SAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQ 397
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 109 (43.4 bits), Expect = 0.00080, P = 0.00080
Identities = 22/54 (40%), Positives = 39/54 (72%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR 111
AA+ H+ +E+RRR +IN++ L+ ++PN K DKAS+L + I+ +++LQ V+
Sbjct: 104 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 157
>UNIPROTKB|Q5JNS0 [details] [associations]
symbol:P0706B05.43 "Os01g0293100 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002482 RefSeq:NP_001042795.1 UniGene:Os.54828 GeneID:4325164
KEGG:osa:4325164 HOGENOM:HOG000071096 OMA:HPQCELL
ProtClustDB:CLSN2691354 Uniprot:Q5JNS0
Length = 379
Score = 110 (43.8 bits), Expect = 0.00084, P = 0.00084
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 66 ERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALCQ 118
E++RRLR+ ++Y+ L ++PN K D+A+V++ I+ ++EL RTV E L +
Sbjct: 182 EKQRRLRLTEKYNALMLLIPNRTKEDRATVISDAIEYIQELGRTVEELTLLVE 234
>UNIPROTKB|Q02363 [details] [associations]
symbol:ID2 "DNA-binding protein inhibitor ID-2"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] [GO:0001656 "metanephros
development" evidence=IEA] [GO:0001779 "natural killer cell
differentiation" evidence=IEA] [GO:0003166 "bundle of His
development" evidence=IEA] [GO:0009649 "entrainment of circadian
clock" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] [GO:0019216 "regulation of lipid metabolic process"
evidence=IEA] [GO:0021772 "olfactory bulb development"
evidence=IEA] [GO:0043353 "enucleate erythrocyte differentiation"
evidence=IEA] [GO:0043392 "negative regulation of DNA binding"
evidence=IEA] [GO:0045578 "negative regulation of B cell
differentiation" evidence=IEA] [GO:0045600 "positive regulation of
fat cell differentiation" evidence=IEA] [GO:0045648 "positive
regulation of erythrocyte differentiation" evidence=IEA]
[GO:0045651 "positive regulation of macrophage differentiation"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0045787 "positive regulation of
cell cycle" evidence=IEA] [GO:0048469 "cell maturation"
evidence=IEA] [GO:0048541 "Peyer's patch development" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0060612 "adipose tissue
development" evidence=IEA] [GO:0071285 "cellular response to
lithium ion" evidence=IEA] [GO:0010628 "positive regulation of gene
expression" evidence=ISS] [GO:0045665 "negative regulation of
neuron differentiation" evidence=ISS] [GO:0045777 "positive
regulation of blood pressure" evidence=ISS] [GO:0048557 "embryonic
digestive tract morphogenesis" evidence=ISS] [GO:0048663 "neuron
fate commitment" evidence=ISS] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=ISS] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=ISS] [GO:0090398 "cellular senescence"
evidence=ISS] [GO:2000178 "negative regulation of neural precursor
cell proliferation" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0043234 "protein
complex" evidence=ISS] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=ISS] [GO:0060749 "mammary gland alveolus
development" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010629 "negative regulation of gene expression"
evidence=ISS] [GO:0048661 "positive regulation of smooth muscle
cell proliferation" evidence=ISS] [GO:0061031 "endodermal digestive
tract morphogenesis" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0044325 "ion
channel binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0071931 "positive regulation of transcription
involved in G1/S phase of mitotic cell cycle" evidence=IC]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR011598 InterPro:IPR026052 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005829 GO:GO:0005634 GO:GO:0045892
GO:GO:0043234 GO:GO:0071158 GO:GO:0009649
Pathway_Interaction_DB:hif1_tfpathway GO:GO:0048661 GO:GO:0045665
GO:GO:0045777 GO:GO:0000785 GO:GO:0060612 GO:GO:0019216
GO:GO:0045600 GO:GO:0000122 GO:GO:0045648 GO:GO:0048541
GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001656
GO:GO:0045668 GO:GO:0014003 GO:GO:0045787 GO:GO:0048663
GO:GO:0090398 GO:GO:0048469 GO:GO:2000045 GO:GO:0048711
GO:GO:0048715 GO:GO:0071285 GO:GO:2000178 GO:GO:0045651
GO:GO:0021772 GO:GO:0033598 GO:GO:0071931 GO:GO:0043353
GO:GO:0043392 eggNOG:NOG76382 KO:K04680 PANTHER:PTHR11723
GO:GO:0048557 GO:GO:0061031 GO:GO:0045578 GO:GO:0061030
GO:GO:0001779 HOVERGEN:HBG009009 HOGENOM:HOG000234788 CTD:3398
OMA:NVSKMEI OrthoDB:EOG4MPHRM GO:GO:0003166 EMBL:D13891 EMBL:M97796
EMBL:BC030639 IPI:IPI00294210 PIR:A40227 PIR:JC2007
RefSeq:NP_002157.2 UniGene:Hs.180919 UniGene:Hs.726053 PDB:4AYA
PDBsum:4AYA ProteinModelPortal:Q02363 SMR:Q02363 DIP:DIP-46874N
IntAct:Q02363 MINT:MINT-1372728 STRING:Q02363 PhosphoSite:Q02363
DMDM:729806 PRIDE:Q02363 DNASU:3398 Ensembl:ENST00000234091
Ensembl:ENST00000331129 Ensembl:ENST00000396290 GeneID:3398
KEGG:hsa:3398 UCSC:uc002qza.3 GeneCards:GC02P008818
H-InvDB:HIX0204445 HGNC:HGNC:5361 HPA:HPA027612 HPA:HPA028681
MIM:600386 neXtProt:NX_Q02363 PharmGKB:PA29609 InParanoid:Q02363
PhylomeDB:Q02363 GenomeRNAi:3398 NextBio:13428 ArrayExpress:Q02363
Bgee:Q02363 CleanEx:HS_ID2 Genevestigator:Q02363
GermOnline:ENSG00000115738 Uniprot:Q02363
Length = 134
Score = 95 (38.5 bits), Expect = 0.00091, P = 0.00091
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 73 INDQYDNLRKILPNLV---KVDKASVLAKTIKTVRELQRTVREQKALCQVHEECVFPSEA 129
+ND Y L++++P++ KV K +L I + +LQ + + +H + ++A
Sbjct: 39 MNDCYSKLKELVPSIPQNKKVSKMEILQHVIDYILDLQIALDSHPTIVSLHHQRPGQNQA 98
Query: 130 NELSLRNCNRDRGMLKVTLSCEDQPELMSDLSRAL 164
+ L N D +L + S E ELMS+ S+AL
Sbjct: 99 SRTPLTTLNTDISILSLQAS-EFPSELMSNDSKAL 132
>UNIPROTKB|Q4R5J7 [details] [associations]
symbol:ID2 "DNA-binding protein inhibitor ID-2"
species:9541 "Macaca fascicularis" [GO:0010628 "positive regulation
of gene expression" evidence=ISS] [GO:0010629 "negative regulation
of gene expression" evidence=ISS] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=ISS] [GO:0043234 "protein
complex" evidence=ISS] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISS] [GO:0045777 "positive regulation of
blood pressure" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=ISS]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=ISS] [GO:0048663 "neuron fate commitment"
evidence=ISS] [GO:0060749 "mammary gland alveolus development"
evidence=ISS] [GO:0061030 "epithelial cell differentiation involved
in mammary gland alveolus development" evidence=ISS] [GO:0061031
"endodermal digestive tract morphogenesis" evidence=ISS]
[GO:0071158 "positive regulation of cell cycle arrest"
evidence=ISS] [GO:0090398 "cellular senescence" evidence=ISS]
[GO:2000178 "negative regulation of neural precursor cell
proliferation" evidence=ISS] InterPro:IPR011598 InterPro:IPR026052
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0043234
GO:GO:0071158 GO:GO:0048661 GO:GO:0045665 GO:GO:0045777
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048663 GO:GO:0090398
GO:GO:2000178 GO:GO:0033598 PANTHER:PTHR11723 GO:GO:0048557
GO:GO:0061031 GO:GO:0061030 HOVERGEN:HBG009009 EMBL:AB169546
ProteinModelPortal:Q4R5J7 SMR:Q4R5J7 Uniprot:Q4R5J7
Length = 134
Score = 95 (38.5 bits), Expect = 0.00091, P = 0.00091
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 73 INDQYDNLRKILPNLV---KVDKASVLAKTIKTVRELQRTVREQKALCQVHEECVFPSEA 129
+ND Y L++++P++ KV K +L I + +LQ + + +H + ++A
Sbjct: 39 MNDCYSKLKELVPSIPQNKKVSKMEILQHVIDYILDLQIALDSHPTIVSLHHQRPGQNQA 98
Query: 130 NELSLRNCNRDRGMLKVTLSCEDQPELMSDLSRAL 164
+ L N D +L + S E ELMS+ S+AL
Sbjct: 99 SRTPLTTLNTDISILSLQAS-EFPSELMSNDSKAL 132
>UNIPROTKB|Q5RCH7 [details] [associations]
symbol:ID2 "DNA-binding protein inhibitor ID-2"
species:9601 "Pongo abelii" [GO:0010628 "positive regulation of
gene expression" evidence=ISS] [GO:0010629 "negative regulation of
gene expression" evidence=ISS] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=ISS] [GO:0043234 "protein
complex" evidence=ISS] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISS] [GO:0045777 "positive regulation of
blood pressure" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=ISS]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=ISS] [GO:0048663 "neuron fate commitment"
evidence=ISS] [GO:0060749 "mammary gland alveolus development"
evidence=ISS] [GO:0061030 "epithelial cell differentiation involved
in mammary gland alveolus development" evidence=ISS] [GO:0061031
"endodermal digestive tract morphogenesis" evidence=ISS]
[GO:0071158 "positive regulation of cell cycle arrest"
evidence=ISS] [GO:0090398 "cellular senescence" evidence=ISS]
[GO:2000178 "negative regulation of neural precursor cell
proliferation" evidence=ISS] InterPro:IPR011598 InterPro:IPR026052
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005829
GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0043234
GO:GO:0071158 GO:GO:0009649 GO:GO:0048661 GO:GO:0045665
GO:GO:0045777 GO:GO:0060612 GO:GO:0019216 GO:GO:0045600
GO:GO:0000122 GO:GO:0045648 GO:GO:0048541 GO:GO:0043433
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001656 GO:GO:0045668
GO:GO:0014003 GO:GO:0048663 GO:GO:0090398 GO:GO:0048469
GO:GO:2000045 GO:GO:0048711 GO:GO:0048715 GO:GO:0071285
GO:GO:2000178 GO:GO:0045651 GO:GO:0021772 GO:GO:0033598
GO:GO:0043353 GO:GO:0043392 GeneTree:ENSGT00390000000908 KO:K04680
PANTHER:PTHR11723 GO:GO:0048557 GO:GO:0061031 GO:GO:0045578
GO:GO:0061030 GO:GO:0001779 HOVERGEN:HBG009009 CTD:3398 OMA:NVSKMEI
GO:GO:0003166 EMBL:CR858293 RefSeq:NP_001125282.1 UniGene:Pab.17358
ProteinModelPortal:Q5RCH7 SMR:Q5RCH7 Ensembl:ENSPPYT00000014774
GeneID:100172180 KEGG:pon:100172180 InParanoid:Q5RCH7
Uniprot:Q5RCH7
Length = 134
Score = 95 (38.5 bits), Expect = 0.00091, P = 0.00091
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 73 INDQYDNLRKILPNLV---KVDKASVLAKTIKTVRELQRTVREQKALCQVHEECVFPSEA 129
+ND Y L++++P++ KV K +L I + +LQ + + +H + ++A
Sbjct: 39 MNDCYSKLKELVPSIPQNKKVSKMEILQHVIDYILDLQIALDSHPTIVSLHHQRPGQNQA 98
Query: 130 NELSLRNCNRDRGMLKVTLSCEDQPELMSDLSRAL 164
+ L N D +L + S E ELMS+ S+AL
Sbjct: 99 SRTPLTTLNTDISILSLQAS-EFPSELMSNDSKAL 132
>FB|FBgn0017578 [details] [associations]
symbol:Max "Max" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=IC;ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AE014296 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG239807 EMBL:U77369 EMBL:AY061014 EMBL:AY089690
EMBL:BT025211 RefSeq:NP_001246833.1 RefSeq:NP_649097.1
UniGene:Dm.3749 ProteinModelPortal:P91664 SMR:P91664 IntAct:P91664
MINT:MINT-977153 STRING:P91664 PRIDE:P91664
EnsemblMetazoa:FBtr0075018 EnsemblMetazoa:FBtr0310276 GeneID:40095
KEGG:dme:Dmel_CG9648 UCSC:CG9648-RA CTD:4149 FlyBase:FBgn0017578
GeneTree:ENSGT00530000064011 InParanoid:P91664 KO:K04453
OMA:TTECIQT OrthoDB:EOG480GD4 PhylomeDB:P91664 GenomeRNAi:40095
NextBio:816971 Bgee:P91664 GermOnline:CG9648 Uniprot:P91664
Length = 161
Score = 101 (40.6 bits), Expect = 0.00093, P = 0.00093
Identities = 31/114 (27%), Positives = 56/114 (49%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLV--KVDKASVLAKTIKTVRELQRTVRE-QKALCQ 118
H+ ERRRR I + + NLR+ +P L K +A +L KT + ++ ++R + E QK + +
Sbjct: 44 HNALERRRRDHIKESFTNLREAVPTLKGEKASRAQILKKTTECIQTMRRKISENQKDIEE 103
Query: 119 V-HEECVFPSEANELSLRNCNRDRGML---KVTLSCEDQPELMSDLSRALRSVK 168
+ + + + L N ++ L +V D +L D SR + +K
Sbjct: 104 IKRQNNIIAKQIQALESSNGDQFSEFLSDEEVGSEEADDEDLDQDFSRRNKKMK 157
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 111 (44.1 bits), Expect = 0.00097, P = 0.00097
Identities = 44/160 (27%), Positives = 73/160 (45%)
Query: 51 KVEAKELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTV 110
K + K + AK + AERRRR ++ND+ LR ++P + K+D+AS+L I ++EL + +
Sbjct: 298 KGKKKGMPAK-NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 356
Query: 111 REQKALCQVHEECVFPSEANELSLRNCNRDRGMLKVTLSCEDQPELMSDLSRALRSVKGR 170
+ +H E + + TLSC + EL +L S KG+
Sbjct: 357 ND------LHNELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPS---SLPSPKGQ 407
Query: 171 LVRAEMVPVGGRIKCVLWVQGFKGNEGMVMLKRALNLVID 210
R E+ GR + G + + +K NL +D
Sbjct: 408 QARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLD 447
>TAIR|locus:2038510 [details] [associations]
symbol:AT1G06170 "AT1G06170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P61244 HOGENOM:HOG000083787 ProtClustDB:CLSN2716481
EMBL:AF488619 EMBL:AC025290 EMBL:BT004262 IPI:IPI00518401
PIR:C86197 RefSeq:NP_172107.1 RefSeq:NP_973769.1 UniGene:At.42353
ProteinModelPortal:Q9LND0 SMR:Q9LND0 EnsemblPlants:AT1G06170.1
EnsemblPlants:AT1G06170.2 GeneID:837126 KEGG:ath:AT1G06170
TAIR:At1g06170 eggNOG:NOG264433 InParanoid:Q9LND0 OMA:YASAIAD
PhylomeDB:Q9LND0 Genevestigator:Q9LND0 Uniprot:Q9LND0
Length = 420
Score = 110 (43.8 bits), Expect = 0.00099, P = 0.00099
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 60 KKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALCQ 118
+K ER RR+ D++ +L+ ++PN K D+AS++ + I ++EL RT+ E K L +
Sbjct: 215 RKIFPTERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTIDEFKLLVE 273
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 225 225 0.00077 113 3 11 22 0.38 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 66
No. of states in DFA: 594 (63 KB)
Total size of DFA: 164 KB (2097 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.70u 0.09s 21.79t Elapsed: 00:00:01
Total cpu time: 21.70u 0.10s 21.80t Elapsed: 00:00:01
Start: Sat May 11 00:42:51 2013 End: Sat May 11 00:42:52 2013