BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040546
(225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 169 bits (429), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 124/195 (63%), Gaps = 12/195 (6%)
Query: 6 QLERGVKPVQSYYNSMTYLKQLS---LTQGSISSNIICYPSLISKPISKVEAKELAAKKH 62
QLE+G++P+ YN Y + + SS + ++KP SK E+KE+AAKKH
Sbjct: 37 QLEQGMRPISRCYNPTAYSTTMGRSFFAGAATSSKLFSRGFSVTKPKSKTESKEVAAKKH 96
Query: 63 SEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALCQVHEE 122
S+AERRRRLRIN Q+ LR ILPNLVK DKASVL +T++ EL++ V++
Sbjct: 97 SDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQDIPTT------ 150
Query: 123 CVFPSEANELSLRNCNRDRGMLKVTLSCEDQPELMSDLSRALRSVKGRLVRAEMVPVGGR 182
PS + L L +CN +R + +V SC D+ LMS+++ ++++VK + VRAE++ VGGR
Sbjct: 151 ---PSLEDNLRLDHCNNNRDLARVVFSCSDREGLMSEVAESMKAVKAKAVRAEIMTVGGR 207
Query: 183 IKCVLWVQGFKGNEG 197
KC L+VQG GNEG
Sbjct: 208 TKCALFVQGVNGNEG 222
>sp|Q9LET0|BH107_ARATH Putative transcription factor bHLH107 OS=Arabidopsis thaliana
GN=BHLH107 PE=2 SV=1
Length = 230
Score = 97.4 bits (241), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 106/175 (60%), Gaps = 18/175 (10%)
Query: 48 PISKV-EAKELAA-KKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRE 105
P + V E K LA+ + H EAER+RR RIN + LRK+L K DK+++LAK ++ V+E
Sbjct: 33 PFATVYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKE 92
Query: 106 LQRTVREQKALCQVHEECVFPSEANELSLRN---CNRD---RGMLKVTLSCEDQPELMSD 159
L+ Q+ L ++ +E + PSE +E+S+ N C+R R + KV+ CED+PEL+ D
Sbjct: 93 LK-----QQTL-EITDETI-PSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKD 145
Query: 160 LSRALRSVKGRLVRAEMVPVGGRIKCVLWVQGFKGNEGMV---MLKRALNLVIDR 211
L L+S++ + A+M VGGR + VL V K + G+ L+ AL +++R
Sbjct: 146 LMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQNALKSLLER 200
>sp|Q9S7Y1|BH030_ARATH Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1
SV=1
Length = 368
Score = 94.7 bits (234), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 93/144 (64%), Gaps = 12/144 (8%)
Query: 52 VEAKELAAKK-HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTV 110
++AK LAA K HSEAERRRR RIN+ LR ILPN K DKAS+LA+ I+ V+EL+R
Sbjct: 167 MDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRET 226
Query: 111 REQKALCQVHEECVFPSEANELSL-----RNCNRDRGMLKVTLSCEDQPELMSDLSRALR 165
+ E + P+E++EL++ R ++K +L CED+ +L+ D+ + L+
Sbjct: 227 ------SVISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLK 280
Query: 166 SVKGRLVRAEMVPVGGRIKCVLWV 189
+++ + ++AE+ VGGR+K VL+V
Sbjct: 281 AMRLKTLKAEITTVGGRVKNVLFV 304
>sp|Q9LS08|BH032_ARATH Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1
SV=1
Length = 344
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 93/142 (65%), Gaps = 10/142 (7%)
Query: 52 VEAKELAAKK-HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTV 110
++AK LAA K HSEAERRRR RIN LR ILPN K DKAS+LA+ I+ ++EL+R
Sbjct: 125 MDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQT 184
Query: 111 REQKALCQVHEECVFPSEANELSLRNC-NRDRG--MLKVTLSCEDQPELMSDLSRALRSV 167
+ QV P+E ++L++ + N + G +++ + C+D+ +LM D+ AL+S+
Sbjct: 185 SQITDTYQV------PTECDDLTVDSSYNDEEGNLVIRASFCCQDRTDLMHDVINALKSL 238
Query: 168 KGRLVRAEMVPVGGRIKCVLWV 189
+ R ++AE+ VGGR+K +L++
Sbjct: 239 RLRTLKAEIATVGGRVKNILFL 260
>sp|O80674|BH106_ARATH Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106
PE=2 SV=1
Length = 253
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 113/205 (55%), Gaps = 15/205 (7%)
Query: 17 YYNSMTYLKQLSLTQGSISSNIICYPSLISKPISKVEAKE--LAA-KKHSEAERRRRLRI 73
Y S Y+ + GS SS YP IS I + A++ LAA + H EAERRRR RI
Sbjct: 24 YCVSGDYMTTMQSLCGSSSSTSSYYPLAIS-GIGETMAQDRALAALRNHKEAERRRRERI 82
Query: 74 NDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALCQVHEECVFPSEANELS 133
N + LR +L K DKA++LAK ++ VREL++ E ++ + PSE +E+S
Sbjct: 83 NSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTLETSD----SDQTLLPSETDEIS 138
Query: 134 LRN----CNRDRGMLKVTLSCEDQPELMSDLSRALRSVKGRLVRAEMVPVGGRIKCVLWV 189
+ + N + K +L CED+ +L+ DL L+S+ + +RAEMV +GGR + VL V
Sbjct: 139 VLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVV 198
Query: 190 QGFK---GNEGMVMLKRALNLVIDR 211
K G E + L+ AL +++R
Sbjct: 199 AADKEMHGVESVHFLQNALKSLLER 223
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2
SV=1
Length = 254
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 83/143 (58%), Gaps = 13/143 (9%)
Query: 49 ISKVEAKELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQR 108
+ +E E ++ H AE+RRR RIN LRK++PN K+DKA++LA I+ V+EL++
Sbjct: 54 VGGIEKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQ 113
Query: 109 TVREQKALCQVHEECVFPSEANELSLR-------NCNRDRGMLKVTLSCEDQPELMSDLS 161
E + P+EA+E++++ N + + K + CEDQPE +S++
Sbjct: 114 KAAESPIFQDL------PTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEII 167
Query: 162 RALRSVKGRLVRAEMVPVGGRIK 184
R L ++ ++AE++ VGGR++
Sbjct: 168 RVLTKLQLETIQAEIISVGGRMR 190
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 54 AKELAA-KKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE 112
A+E++A K H +ER+RR ++N+ + L+ +LP++ +V+KAS+LA+TI ++ELQR V+E
Sbjct: 410 AQEMSATKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQE 469
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%)
Query: 63 SEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALCQ 118
S ER RR+ ND++ +L+ ++PN K+D+AS++ + I ++EL RT+ E K L +
Sbjct: 249 SPTERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEFKMLVE 304
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR 111
H EAER+RR ++N ++ LR ++PN+ K+DKAS+L I ++ELQ V+
Sbjct: 396 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVK 445
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 59 AKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR 111
A H EAER+RR ++N ++ LR ++PN+ K+DKAS+LA I + ++Q+ +R
Sbjct: 318 ALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIR 370
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 53 EAKELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE 112
E K H +ER+RR ++N+ + L+ +LP++ +V+KAS+LA+TI ++ELQR V+E
Sbjct: 408 EMSGTGTKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQE 467
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 40/51 (78%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE 112
H+ E++RR ++N+++ LRKI+P++ K+DK S+L TI+ ++EL+R V+E
Sbjct: 442 HAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQE 492
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 39/54 (72%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKA 115
H EAER+RR ++N ++ +LR ++PN+ K+DKAS+L I + EL+ +++ ++
Sbjct: 416 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAES 469
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 40/51 (78%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE 112
H+ +E++RR ++N+++ LR I+P++ K+DK S+L TI+ +++LQ+ V+E
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQE 456
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTV 110
H EAER+RR ++N ++ LR ++PN+ K+DKAS+L I + EL+ V
Sbjct: 453 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKV 501
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 65 AERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE 112
AERRRR ++ND+ LR ++P + K+D+AS+L I V+ELQ +E
Sbjct: 318 AERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKE 365
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 39/54 (72%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKA 115
H EAER+RR ++N ++ +LR ++PN+ K+DKAS+L I + EL+ +++ ++
Sbjct: 417 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAES 470
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTV 110
AA H+++ER+RR +IN + L+K++PN K DKAS+L + I+ +++LQ V
Sbjct: 214 AAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
>sp|Q9LND0|BH089_ARATH Transcription factor bHLH89 OS=Arabidopsis thaliana GN=BHLH89 PE=2
SV=1
Length = 420
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 65 AERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALCQ 118
ER RR+ D++ +L+ ++PN K D+AS++ + I ++EL RT+ E K L +
Sbjct: 220 TERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTIDEFKLLVE 273
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 59 AKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKA 115
A H EAER+RR ++N ++ LR ++PN+ K+DKAS+L + + EL ++ +A
Sbjct: 431 ALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEA 487
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 40/54 (74%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR 111
+A+ H+ +ERRRR RIN++ L++++PN KVDKAS+L + I+ ++ LQ V+
Sbjct: 344 SAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQ 397
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE 112
H AERRRR ++N+++ LR ++P + K+DK S+L TI V L++ V E
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHE 414
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 39/54 (72%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR 111
AA+ H+ +E+RRR RIN++ L+ ++PN K DKAS+L + I+ +++LQ V+
Sbjct: 198 AAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 251
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 31 QGSISSNIICYPSLISKPISKVEAKE-LAAKKHSEAERRRRLRINDQYDNLRKILPNLVK 89
QG++S+ P + KP +V A+ A HS AER RR RI ++ +L++++PN K
Sbjct: 82 QGTVST--TSAPVVRQKP--RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK 137
Query: 90 VDKASVLAKTIKTVRELQRTVR 111
DKAS+L + I+ VR LQ V+
Sbjct: 138 TDKASMLDEIIEYVRFLQLQVK 159
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 65 AERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKA 115
+ERRRR R+ D+ LR ++PN+ K+DKAS++ + V+ELQ ++ K+
Sbjct: 135 SERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKS 185
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 41/57 (71%)
Query: 55 KELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR 111
+ + A+ H+ +E++RR +IN++ L+K++PN K DKAS+L + I+ +++LQ V+
Sbjct: 91 RNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 147
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 60 KKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR 111
K+H AER+RR ++N++ L +LP L K DKA+VL IK +++LQ V+
Sbjct: 131 KEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVK 182
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 59 AKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQ---RTVREQK 114
AK+H AER+RR ++++++ L +LP L K DK ++L I +++LQ RT++E+K
Sbjct: 117 AKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEK 175
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 59 AKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTV 110
A+ H AER+RR ++ ++ L ++P L K+DKASVL IK ++ LQ +V
Sbjct: 124 AQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESV 175
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 65 AERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE 112
AERRRR ++ND+ LR ++P + K+D+AS+L I ++EL + + +
Sbjct: 311 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 358
>sp|Q9LEZ3|BIM1_ARATH Transcription factor BIM1 OS=Arabidopsis thaliana GN=BIM1 PE=1 SV=2
Length = 529
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 61 KHSEAERRRRLRINDQYDNLRKILPNL-VKVDKASVLAKTIKTVRELQ 107
KHS E+RRR +IND++ LR+++PN K DKAS L + I+ ++ LQ
Sbjct: 280 KHSATEQRRRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQ 327
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 65 AERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE 112
AERRRR ++ND+ LR ++P + K+D+AS+L I ++EL + + +
Sbjct: 271 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 318
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR 111
A HS AER RR RI ++ +L++++PN K DKAS+L + I V+ LQ V+
Sbjct: 137 ATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVK 190
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 65 AERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALCQ 118
ER RR +N++Y+ L+ ++P+ K D+AS+L I + EL+R V E K L +
Sbjct: 218 TERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELKYLVE 271
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 46 SKPISKVEAKELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRE 105
++P S+ ++ A+ H AER+RR ++ ++ L ++P L K+DKASVL +K ++
Sbjct: 140 AQPFSRNQSN---AQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKY 196
Query: 106 LQRTVRE 112
LQ V E
Sbjct: 197 LQERVGE 203
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR 111
A HS AER RR RI ++ L++++PN K DKAS+L + I V+ LQ V+
Sbjct: 145 ATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVK 198
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 62 HSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQ 107
H EAER RR ++N ++ LR ++PN+ K+DK S+L + + EL+
Sbjct: 344 HVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELK 389
>sp|Q9FMB6|BIM3_ARATH Transcription factor BIM3 OS=Arabidopsis thaliana GN=BIM3 PE=1 SV=1
Length = 298
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 61 KHSEAERRRRLRINDQYDNLRKILP---NLVKVDKASVLAKTIKTVRELQRTVR 111
KHSE E+RRR +IN+++ +L I+P N K DKAS L + I+ + LQ V
Sbjct: 37 KHSETEQRRRSKINERFQSLMDIIPQNQNDQKRDKASFLLEVIEYIHFLQEKVH 90
>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
GN=LAX PE=1 SV=1
Length = 215
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 57 LAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR-EQKA 115
L+ S A R RR RI+D++ LR ++P K+D S+L + I V+ L+ V Q A
Sbjct: 40 LSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQAA 99
Query: 116 LCQVHEEC 123
L Q E C
Sbjct: 100 LVQHEEGC 107
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR 111
AA H +ERRRR +IN+ L+++LP K D++S+L I+ V+ LQ ++
Sbjct: 278 AAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE----- 112
AA+ H+ AERRRR +IN++ L++++P K K S+L I+ V+ L+ + +
Sbjct: 151 AAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQINQFMPHM 210
Query: 113 QKALCQVHEECVFPSEAN 130
+ Q FPS+A+
Sbjct: 211 AMGMNQPPAYIPFPSQAH 228
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQ 107
AA+ H+ +ER+RR RIN++ L++++P K DKAS+L + I+ ++ LQ
Sbjct: 285 AAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQ 334
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVREL 106
A+ K+ +ER RR ++N + LR ++PN+ K+DKASV+ +I ++EL
Sbjct: 51 ASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQEL 99
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 47 KPISKVEAKELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVREL 106
KP++K ++ + + H ER+RR N + L+ +LPN K DKAS+L + IK +R L
Sbjct: 222 KPVTK---RKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTL 278
Query: 107 QRTVR 111
Q V+
Sbjct: 279 QLQVQ 283
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 59 AKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVREQKALCQ 118
A K+ +ER RR ++N + LR ++PN+ K+DKAS++ I + LQ E+K +
Sbjct: 53 ASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQ--YEEKKLEAE 110
Query: 119 VHEECVFPSEANELSLRNCNRD 140
+ E P + S ++ +RD
Sbjct: 111 IRELESTPKSSLSFS-KDFDRD 131
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 53 EAKELAAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVRE 112
E A H EAE++RR ++N ++ LR I+P + ++DKAS+L+ + + L+ + +
Sbjct: 241 EKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDD 300
>sp|Q9CAA4|BIM2_ARATH Transcription factor BIM2 OS=Arabidopsis thaliana GN=BIM2 PE=1 SV=1
Length = 311
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 35 SSNIICYPSLISKPISKVEAKELAAKKHSEAERRRRLRINDQYDNLRKILPNL-VKVDKA 93
SSN + + SK K A KHS E+RRR +IN+++ LR+++PN K D A
Sbjct: 26 SSNTTVHSNRDSKENDKASA---IRSKHSVTEQRRRSKINERFQILRELIPNSEQKRDTA 82
Query: 94 SVLAKTIKTVRELQRTVR 111
S L + I V+ LQ V+
Sbjct: 83 SFLLEVIDYVQYLQEKVQ 100
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 59 AKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR 111
A+ H+ AERRRR +IN++ L++++P K K S L I+ V+ LQ ++
Sbjct: 257 AEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQ 309
>sp|Q570R7|PIF7_ARATH Transcription factor PIF7 OS=Arabidopsis thaliana GN=BHLH72 PE=1
SV=2
Length = 366
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 58 AAKKHSEAERRRRLRINDQYDNLRKILPNLVKVDKASVLAKTIKTVRELQRTVR 111
AA H+E+ERRRR RIN + L+K+LP K DK S+L I+ +++LQ V+
Sbjct: 167 AAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQ 220
>sp|Q3ZC46|ID2_BOVIN DNA-binding protein inhibitor ID-2 OS=Bos taurus GN=ID2 PE=2 SV=1
Length = 134
Score = 38.5 bits (88), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 73 INDQYDNLRKILPNLV---KVDKASVLAKTIKTVRELQRTVREQKALCQVHEECVFPSEA 129
+ND Y L++++P++ KV K +L I + +LQ + + +H + S+A
Sbjct: 39 MNDCYSKLKELVPSIPQNKKVSKMEILQHVIDYILDLQIALDSHPTIVSLHHQRPGQSQA 98
Query: 130 NELSLRNCNRDRGMLKVTLSCEDQPELMSDLSRAL 164
+ L N D +L + S E ELMS+ S+AL
Sbjct: 99 SRTPLTTLNTDISILSLQAS-EFPSELMSNDSKAL 132
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,827,052
Number of Sequences: 539616
Number of extensions: 2677017
Number of successful extensions: 8839
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 228
Number of HSP's that attempted gapping in prelim test: 8704
Number of HSP's gapped (non-prelim): 332
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)