BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040548
(71 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1TIN|A Chain A, Three-Dimensional Structure In Solution Of Cucurbita
Maxima Trypsin Inhibitor-V Determined By Nmr
Spectroscopy
Length = 69
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 3 SSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHG 62
SSCP GK SWP LVG+ G A II +NP V A ++E VT DFRC+RVR++VN G
Sbjct: 2 SSCP-GKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRG 60
Query: 63 IVTRVPRIG 71
+V PRIG
Sbjct: 61 LVVSPPRIG 69
>pdb|1MIT|A Chain A, Recombinant Cucurbita Maxima Trypsin Inhibitor V
(Rcmti-V) (Nmr, Minimized Average Structure)
Length = 69
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 3 SSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHG 62
SSCP GK SWP LVG+ G A II +NP V A ++E VT DFRC+RVR++VN G
Sbjct: 2 SSCP-GKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRG 60
Query: 63 IVTRVPRIG 71
+V PRIG
Sbjct: 61 LVVSPPRIG 69
>pdb|1DWM|A Chain A, Solution Structure Of Linum Usitatissinum Trypsin
Inhibitor (Luti)
Length = 70
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 2 SSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDH 61
S CP GK +WPELVG +G AA + EN V A + E + +T DFRCDRV V VNDH
Sbjct: 2 SRRCP-GKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDH 60
Query: 62 GIVTRVPRI 70
G+VT VP I
Sbjct: 61 GVVTSVPHI 69
>pdb|1VBW|A Chain A, Crystal Structure Of Bitter Gourd Trypsin Inhibitor
Length = 68
Score = 72.8 bits (177), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 42/64 (65%)
Query: 8 GKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRV 67
GK SWP+LVG G AA +I ENP+V A + + T DFRCDRVRV+V + GIV R
Sbjct: 5 GKSSWPQLVGSTGAAAKAVIERENPRVRAVIIKVGSGATKDFRCDRVRVWVTERGIVARP 64
Query: 68 PRIG 71
P IG
Sbjct: 65 PTIG 68
>pdb|3RDY|A Chain A, Crystal Structure Of Buckwheat Trypsin Inhibitor Rbti At
1.84 Angstrom Resolution
pdb|3RDZ|C Chain C, Crystal Structure Of Rbti-Trypsin Complex At 2.26
Angstrom Resolution
pdb|3RDZ|D Chain D, Crystal Structure Of Rbti-Trypsin Complex At 2.26
Angstrom Resolution
Length = 79
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 37/62 (59%)
Query: 7 AGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTR 66
+GK WPELVG G AA II EN V A + E + V D RCDRV VFV++ G+V
Sbjct: 15 SGKQEWPELVGERGSKAAKIIENENEDVRAIVLPEGSAVPRDLRCDRVWVFVDERGVVVD 74
Query: 67 VP 68
P
Sbjct: 75 TP 76
>pdb|1TM5|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59a Mutant
Length = 64
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IVTA++R DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTAEYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1COA|I Chain I, The Effect Of Cavity Creating Mutations In The
Hydrophobic Core Of Chymotrypsin Inhibitor 2
Length = 64
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P+ + IVT ++R DRVR+FV+ V VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNVAEVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|3CI2|A Chain A, Refinement Of The Three-Dimensional Solution Structure
Of Barley Serine Proteinase Inhibitor 2 And Comparison
With The Structures In Crystals
Length = 66
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P+ + IVT ++R DRVR+FV+ + +VP
Sbjct: 4 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 63
Query: 69 RIG 71
R+G
Sbjct: 64 RVG 66
>pdb|1YPC|I Chain I, Direct Observation Of Better Hydration At The N-Terminus
Of An Alpha-Helix With Glycine Rather Than Alanine As
N-Cap
Length = 64
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + AA +I+ + P+ + IVT ++R DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKSVAAAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1LW6|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 At 1.5 Angstrom Resolution
Length = 64
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IVT ++R DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1TM3|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59k Mutant
pdb|1TO2|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59k, In Ph 9 Cryosoak
Length = 64
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IVT ++R DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTKEYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|2CI2|I Chain I, Crystal And Molecular Structure Of The Serine Proteinase
Inhibitor Ci-2 From Barley Seeds
pdb|2SNI|I Chain I, Structural Comparison Of Two Serine Proteinase-Protein
Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And
Ci-2- Subtilisin Novo
Length = 83
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P+ + IVT ++R DRVR+FV+ + VP
Sbjct: 21 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAEVP 80
Query: 69 RIG 71
R+G
Sbjct: 81 RVG 83
>pdb|1TM1|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2
Length = 64
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IVT ++R DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1TM7|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59y Mutant
Length = 64
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IVT ++R DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTYEYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1TM4|I Chain I, Crystal Structure Of The Complex Of Subtilsin Bpn'with
Chymotrypsin Inhibitor 2 M59g Mutant
Length = 64
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IVT ++R DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTGEYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1YPA|I Chain I, Direct Observation Of Better Hydration At The N-Terminus
Of An Alpha-Helix With Glycine Rather Than Alanine As
N-Cap
Length = 64
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG AA +I+ + P+ + IVT ++R DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKAVAAAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1YPB|I Chain I, Direct Observation Of Better Hydration At The N-Terminus
Of An Alpha-Helix With Glycine Rather Than Alanine As
N-Cap
Length = 64
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG AA +I+ + P+ + IVT ++R DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKGVAAAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1TMG|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59f Mutant
Length = 64
Score = 55.5 bits (132), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IVT ++R DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTFEYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1Y3B|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 E60s Mutant
Length = 64
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IVT +R DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMSYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1Y4A|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59r/e60s Mutant
pdb|1Y4D|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59rE60S MUTANT
Length = 64
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IVT +R DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTRSYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1Y34|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 E60a Mutant
Length = 64
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IVT +R DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMAYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1Y1K|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 T58a Mutant
Length = 64
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IV ++R DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVAMEYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1Y33|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 T58p Mutant
Length = 64
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IV ++R DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVPMEYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1TO1|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 Y61a Mutant
Length = 64
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IVT + R DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEARIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1Y3D|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R67a Mutant
Length = 64
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IVT ++R DRV +FV+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVALFVDRLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1Y48|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R65a Mutant
Length = 64
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IVT ++R D VR+FV+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDAVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1Y3C|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R62a Mutant
Length = 64
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IVT ++ DRVR+FV+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYAIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1Y3F|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 F69a Mutant
Length = 64
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
K WPELVG + E A +I+ + P + IVT ++R DRVR+ V+ + +VP
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVRLAVDRLDNIAQVP 61
Query: 69 RIG 71
R+G
Sbjct: 62 RVG 64
>pdb|1CIS|A Chain A, Context Dependence Of Protein Secondary Structure
Formation. The Three-Dimensional Structure And
Stability Of A Hybrid Between Chymotrypsin Inhibitor 2
And Helix E From Subtilisin Carlsberg
Length = 66
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAI--VTADFRCDRVRVFVNDHGIVTR 66
K WPELVG + E A +I+ + P+ +++ A+ A++R DRVR+ V+ + +
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLEKQAVDNAYAEYRIDRVRLAVDKLDNIAQ 61
Query: 67 VPRIG 71
VPR+G
Sbjct: 62 VPRVG 66
>pdb|1HYM|A Chain A, Hydrolyzed Trypsin Inhibitor (Cmti-V, Minimized Average
Nmr Structure)
Length = 45
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 3 SSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVT 46
SSCP GK SWP LVG+ G A II +NP V A ++E VT
Sbjct: 2 SSCP-GKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVT 44
>pdb|1CSE|I Chain I, The High-Resolution X-Ray Crystal Structure Of The
Complex Formed Between Subtilisin Carlsberg And Eglin
C, An Elastase Inhibitor From The Leech Hirudo
Medicinalis. Structural Analysis, Subtilisin Structure
And Interface Geometry
pdb|2SEC|I Chain I, Structural Comparison Of Two Serine Proteinase-Protein
Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And
Ci-2- Subtilisin Novo
Length = 70
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
S+PE+VG + A P+ + E + VT D R +RVRVF N +V VP
Sbjct: 9 SFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPH 68
Query: 70 IG 71
+G
Sbjct: 69 VG 70
>pdb|1MEE|I Chain I, The Complex Between The Subtilisin From A Mesophilic
Bacterium And The Leech Inhibitor Eglin-C
Length = 64
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
S+PE+VG + A P+ + E + VT D R +RVRVF N +V VP
Sbjct: 3 SFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPH 62
Query: 70 IG 71
+G
Sbjct: 63 VG 64
>pdb|4B2A|B Chain B, Structure Of The Factor Xa-Like Trypsin Variant
Triple-Ala (Tga) In Complex With Eglin C
pdb|4B2A|D Chain D, Structure Of The Factor Xa-Like Trypsin Variant
Triple-Ala (Tga) In Complex With Eglin C
Length = 66
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
S+PE+VG + A P+ + E + VT D R +RVRVF N +V VP
Sbjct: 5 SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTKDLRYNRVRVFYNPGTNVVNHVPH 64
Query: 70 IG 71
+G
Sbjct: 65 VG 66
>pdb|4B1T|B Chain B, Structure Of The Factor Xa-Like Trypsin Variant
Triple-Ala ( Ta) In Complex With Eglin C
pdb|4B1T|D Chain D, Structure Of The Factor Xa-Like Trypsin Variant
Triple-Ala ( Ta) In Complex With Eglin C
Length = 70
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
S+PE+VG + A P+ + E + VT D R +RVRVF N +V VP
Sbjct: 9 SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTKDLRYNRVRVFYNPGTNVVNHVPH 68
Query: 70 IG 71
+G
Sbjct: 69 VG 70
>pdb|1SBN|I Chain I, Refined Crystal Structures Of Subtilisin Novo In Complex
With Wild-Type And Two Mutant Eglins. Comparison With
Other Serine Proteinase Inhibitor Complexes
Length = 70
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
S+PE+VG + A P+ + E + VT D R +RVRVF N +V VP
Sbjct: 9 SFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTRDLRYNRVRVFYNPGTNVVNHVPH 68
Query: 70 IG 71
+G
Sbjct: 69 VG 70
>pdb|4B2B|B Chain B, Structure Of The Factor Xa-Like Trypsin Variant
Triple-Ala (Tgpa) In Complex With Eglin C
pdb|4B2B|D Chain D, Structure Of The Factor Xa-Like Trypsin Variant
Triple-Ala (Tgpa) In Complex With Eglin C
pdb|4B2C|B Chain B, Structure Of The Factor Xa-Like Trypsin Variant
Triple-Ala (Tpa) In Complex With Eglin C
pdb|4B2C|D Chain D, Structure Of The Factor Xa-Like Trypsin Variant
Triple-Ala (Tpa) In Complex With Eglin C
Length = 71
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
S+PE+VG + A P+ + E + VT D R +RVRVF N +V VP
Sbjct: 10 SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTKDLRYNRVRVFYNPGTNVVNHVPH 69
Query: 70 IG 71
+G
Sbjct: 70 VG 71
>pdb|4H4F|B Chain B, Crystal Structure Of Human Chymotrypsin C (ctrc) Bound
To Inhibitor Eglin C From Hirudo Medicinalis
Length = 70
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
S+PE+VG + A P+ + E + VT D R +RVRVF N +V VP
Sbjct: 9 SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPH 68
Query: 70 IG 71
+G
Sbjct: 69 VG 70
>pdb|1TEC|I Chain I, Crystallographic Refinement By Incorporation Of
Molecular Dynamics. The Thermostable Serine Protease
Thermitase Complexed With Eglin-C
pdb|2TEC|I Chain I, Molecular Dynamics Refinement Of A Thermitase-Eglin-C
Complex At 1.98 Angstroms Resolution And Comparison Of
Two Crystal Forms That Differ In Calcium Content
pdb|3TEC|I Chain I, Calcium Binding To Thermitase. Crystallographic Studies
Of Thermitase At 0, 5 And 100 Mm Calcium
pdb|1ACB|I Chain I, Crystal And Molecular Structure Of The Bovine
Alpha-Chymotrypsin-Eglin C Complex At 2.0 Angstroms
Resolution
pdb|1EGL|A Chain A, The Solution Structure Of Eglin C Based On Measurements
Of Many Noes And Coupling Constants And Its Comparison
With X- Ray Structures
Length = 70
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
S+PE+VG + A P+ + E + VT D R +RVRVF N +V VP
Sbjct: 9 SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPH 68
Query: 70 IG 71
+G
Sbjct: 69 VG 70
>pdb|1SIB|I Chain I, Refined Crystal Structures Of Subtilisin Novo In Complex
With Wild-Type And Two Mutant Eglins. Comparison With
Other Serine Proteinase Inhibitor Complexes
Length = 70
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
S+PE+VG + A P+ + E + VT D R +RV+VF N +V VP
Sbjct: 9 SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTLDLRYNRVKVFYNPGTNVVNHVPH 68
Query: 70 IG 71
+G
Sbjct: 69 VG 70
>pdb|1HYM|B Chain B, Hydrolyzed Trypsin Inhibitor (Cmti-V, Minimized Average
Nmr Structure)
Length = 24
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 48 DFRCDRVRVFVNDHGIVTRVPRIG 71
DFRC+RVR++VN G+V PRIG
Sbjct: 1 DFRCNRVRIWVNKRGLVVSPPRIG 24
>pdb|1CIR|A Chain A, Complex Of Two Fragments Of Ci2 [(1-40)(Dot)(41-64)]
Length = 40
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVT 46
K WPELVG + E A +I+ + P+ + IVT
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVT 39
>pdb|1CIQ|A Chain A, Complex Of Two Fragments Of Ci2, Residues 1-40 And 41-64
Length = 40
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVT 46
K WPELVG + E A +I+ + P+ + IVT
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVT 39
>pdb|1CQ4|A Chain A, Ci2 Mutant With Tetraglutamine (mgqqqqgm) Replacing
Met59
Length = 47
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVT 46
K WPELVG + E A +I+ + P+ + IVT
Sbjct: 2 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVT 39
>pdb|1CIQ|B Chain B, Complex Of Two Fragments Of Ci2, Residues 1-40 And 41-64
pdb|1CQ4|B Chain B, Ci2 Mutant With Tetraglutamine (mgqqqqgm) Replacing
Met59
pdb|1CIR|B Chain B, Complex Of Two Fragments Of Ci2 [(1-40)(Dot)(41-64)]
Length = 24
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 48 DFRCDRVRVFVNDHGIVTRVPRIG 71
++R DRVR+FV+ + +VPR+G
Sbjct: 1 EYRIDRVRLFVDKLDNIAQVPRVG 24
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,086,114
Number of Sequences: 62578
Number of extensions: 63883
Number of successful extensions: 173
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 127
Number of HSP's gapped (non-prelim): 46
length of query: 71
length of database: 14,973,337
effective HSP length: 41
effective length of query: 30
effective length of database: 12,407,639
effective search space: 372229170
effective search space used: 372229170
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)