BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040557
(407 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 227 bits (579), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 184/295 (62%), Gaps = 5/295 (1%)
Query: 65 NLRTISYFDFQTLKKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGES 124
+L + F + L+ A+ NF N+LGRGGFG VY+G+LADGTLVAVK+L ++ Q GE
Sbjct: 21 HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL 80
Query: 125 EFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLD--LLIYGESDKFLNWST 182
+F +EV MI+ H+NL+RL G C ++RLLVY YM N S+ L ES L+W
Sbjct: 81 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 140
Query: 183 RFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS 242
R +I LG ARGL YLH+ +I+HRD+KA+N+LLDE+F++ +GDFGLA+ ++
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 200
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLT--LPSEMQYLPEYA 300
GT+G+ APEY G+ SEK D++ +GV++LE+I+ ++ DL + L ++
Sbjct: 201 XAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 301 WKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355
L + ++ LVD ++ + + Q+I VA +C Q +RP MSE+V ML
Sbjct: 261 KGLLKEKKLEALVDVDLQG-NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 183/295 (62%), Gaps = 5/295 (1%)
Query: 65 NLRTISYFDFQTLKKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGES 124
+L + F + L+ A+ NF N+LGRGGFG VY+G+LADG LVAVK+L +++Q GE
Sbjct: 13 HLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL 72
Query: 125 EFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLD--LLIYGESDKFLNWST 182
+F +EV MI+ H+NL+RL G C ++RLLVY YM N S+ L ES L+W
Sbjct: 73 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 183 RFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS 242
R +I LG ARGL YLH+ +I+HRD+KA+N+LLDE+F++ +GDFGLA+ ++
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 192
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLT--LPSEMQYLPEYA 300
G +G+ APEY G+ SEK D++ +GV++LE+I+ ++ DL + L ++
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 301 WKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355
L + ++ LVD ++ + + Q+I VA +C Q +RP MSE+V ML
Sbjct: 253 KGLLKEKKLEALVDVDLQG-NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/279 (39%), Positives = 168/279 (60%), Gaps = 8/279 (2%)
Query: 77 LKKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI 136
L++AT NF L+G G FG VY+G L DG VA+K+ +S QG EF +E+ ++
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRR-TPESSQGIEEFETEIETLSFC 92
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGES--DKFLNWSTRFQIILGIARGL 194
+H +LV L+G C + ++ +L+Y+YM+N +L +YG ++W R +I +G ARGL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLSTNFAGTLGYTA 253
YLH + I+HRD+K+ N+LLDE F KI DFG+++ E DQ +L GTLGY
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
PEY I+G L+EK+D+YSFGV++ E++ R +LP EM L E+A + + G++ ++V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIV 352
DP + + I + + A CL RP M +++
Sbjct: 270 DPNL-ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 167/279 (59%), Gaps = 8/279 (2%)
Query: 77 LKKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI 136
L++AT NF L+G G FG VY+G L DG VA+K+ +S QG EF +E+ ++
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRR-TPESSQGIEEFETEIETLSFC 92
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGES--DKFLNWSTRFQIILGIARGL 194
+H +LV L+G C + ++ +L+Y+YM+N +L +YG ++W R +I +G ARGL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLSTNFAGTLGYTA 253
YLH + I+HRD+K+ N+LLDE F KI DFG+++ E Q +L GTLGY
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
PEY I+G L+EK+D+YSFGV++ E++ R +LP EM L E+A + + G++ ++V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIV 352
DP + + I + + A CL RP M +++
Sbjct: 270 DPNL-ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 165/295 (55%), Gaps = 19/295 (6%)
Query: 72 FDFQTLKKATKNFHP------GNLLGRGGFGPVYRGKLADGTLVAVKKLC--VD-KSQQG 122
F F LK T NF GN +G GGFG VY+G + + T VAVKKL VD +++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 123 ESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWS 181
+ +F E++++ QH+NLV LLG SDG LVY YM N SL D L + L+W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 182 TRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAY 240
R +I G A G+ +LHE+ H +HRDIK++N+LLDE F +KI DFGLAR + Q
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYA 300
+ + GT Y APE A+RGE++ K+DIYSFGV++LEII+ D ++ L
Sbjct: 191 MXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LLDIKE 248
Query: 301 WKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355
E I + +D +M +A+ +VA CL N+RP + ++ +L
Sbjct: 249 EIEDEEKTIEDYIDKKMNDADSTSVEAM--YSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 164/295 (55%), Gaps = 19/295 (6%)
Query: 72 FDFQTLKKATKNFHP------GNLLGRGGFGPVYRGKLADGTLVAVKKLC--VD-KSQQG 122
F F LK T NF GN +G GGFG VY+G + + T VAVKKL VD +++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 123 ESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWS 181
+ +F E++++ QH+NLV LLG SDG LVY YM N SL D L + L+W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 182 TRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAY 240
R +I G A G+ +LHE+ H +HRDIK++N+LLDE F +KI DFGLAR + Q
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYA 300
+ GT Y APE A+RGE++ K+DIYSFGV++LEII+ D ++ L
Sbjct: 191 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LLDIKE 248
Query: 301 WKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355
E I + +D +M +A+ +VA CL N+RP + ++ +L
Sbjct: 249 EIEDEEKTIEDYIDKKMNDADSTSVEAM--YSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 164/295 (55%), Gaps = 19/295 (6%)
Query: 72 FDFQTLKKATKNFHP------GNLLGRGGFGPVYRGKLADGTLVAVKKLC--VD-KSQQG 122
F F LK T NF GN +G GGFG VY+G + + T VAVKKL VD +++
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 123 ESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWS 181
+ +F E++++ QH+NLV LLG SDG LVY YM N SL D L + L+W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 182 TRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAY 240
R +I G A G+ +LHE+ H +HRDIK++N+LLDE F +KI DFGLAR + Q
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYA 300
+ GT Y APE A+RGE++ K+DIYSFGV++LEII+ D ++ L
Sbjct: 185 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LLDIKE 242
Query: 301 WKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355
E I + +D +M +A+ +VA CL N+RP + ++ +L
Sbjct: 243 EIEDEEKTIEDYIDKKMNDADSTSVEAM--YSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 164 bits (415), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 159/295 (53%), Gaps = 19/295 (6%)
Query: 72 FDFQTLKKATKNFHP------GNLLGRGGFGPVYRGKLADGTLVAVKKLC--VD-KSQQG 122
F F LK T NF GN G GGFG VY+G + + T VAVKKL VD +++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 123 ESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWS 181
+ +F E+++ QH+NLV LLG SDG LVY Y N SL D L + L+W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 182 TRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAY 240
R +I G A G+ +LHE+ H +HRDIK++N+LLDE F +KI DFGLAR + Q
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYA 300
+ GT Y APE A+RGE++ K+DIYSFGV++LEII+ D ++ L
Sbjct: 182 XXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LLDIKE 239
Query: 301 WKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355
E I + +D + +A +VA CL N+RP + ++ +L
Sbjct: 240 EIEDEEKTIEDYIDKKXNDADSTSVEA--XYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 142/279 (50%), Gaps = 25/279 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLC-VDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G FG V+R + G+ VAVK L D + +EFL EV ++ ++H N+V +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKF-LNWSTRFQIILGIARGLQYLHEDSHTRIVH 207
+ +V EY+ SL L++ + L+ R + +A+G+ YLH + + IVH
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 208 RDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL-STNFAGTLGYTAPEYAIRGELS-EK 265
RD+K+ N+L+D+K+ K+ DFGL+R + +L S AGT + APE +R E S EK
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPE-VLRDEPSNEK 219
Query: 266 ADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVER 325
+D+YSFGV++ E+ + ++ W +++ V + ++ I
Sbjct: 220 SDVYSFGVILWELATLQQ----------------PWGNLNPAQVVAAVGFKCKRLEIPRN 263
Query: 326 DALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
QV + C +RP + I+ +L ++S +P
Sbjct: 264 LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 144/279 (51%), Gaps = 25/279 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLC-VDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G FG V+R + G+ VAVK L D + +EFL EV ++ ++H N+V +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKF-LNWSTRFQIILGIARGLQYLHEDSHTRIVH 207
+ +V EY+ SL L++ + L+ R + +A+G+ YLH + + IVH
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 208 RDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST-NFAGTLGYTAPEYAIRGELS-EK 265
R++K+ N+L+D+K+ K+ DFGL+R + +LS+ + AGT + APE +R E S EK
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPE-VLRDEPSNEK 219
Query: 266 ADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVER 325
+D+YSFGV++ E+ + ++ W +++ V + ++ I
Sbjct: 220 SDVYSFGVILWELATLQQ----------------PWGNLNPAQVVAAVGFKCKRLEIPRN 263
Query: 326 DALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
QV + C +RP + I+ +L ++S +P
Sbjct: 264 LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 6/191 (3%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE+ K+L + IA G+ Y+ ++ VHRD
Sbjct: 74 E-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 129
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
++A+N+L+ E K+ DFGLAR +++ + +TAPE A+ G + K+D++
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 270 SFGVLVLEIIS 280
SFG+L+ E+ +
Sbjct: 190 SFGILLTELTT 200
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 104/192 (54%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE+ K+L + IA G+ Y+ ++ VHRD
Sbjct: 77 E-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 132
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ E K+ DFGLAR ED Y + A + +TAPE A+ G + K+D+
Sbjct: 133 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+ +
Sbjct: 192 WSFGILLTELTT 203
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 103/192 (53%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ I+H+ LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE K+L + IA G+ Y+ ++ VHRD
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 139
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ E K+ DFGLAR ED Y + A + +TAPE A+ G + K+D+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+ +
Sbjct: 199 WSFGILLTELTT 210
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 104/192 (54%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE+ K+L + IA G+ Y+ ++ VHRD
Sbjct: 81 E-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---VHRD 136
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ E K+ DFGLAR ED Y + A + +TAPE A+ G + K+D+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+ +
Sbjct: 196 WSFGILLTELTT 207
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 104/192 (54%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE+ K+L + IA G+ Y+ ++ VHRD
Sbjct: 333 E-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 388
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ E K+ DFGLAR ED Y + A + +TAPE A+ G + K+D+
Sbjct: 389 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+ +
Sbjct: 448 WSFGILLTELTT 459
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 104/192 (54%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE+ K+L + IA G+ Y+ ++ VHRD
Sbjct: 250 E-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 305
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ E K+ DFGLAR ED Y + A + +TAPE A+ G + K+D+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+ +
Sbjct: 365 WSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 104/192 (54%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE+ K+L + IA G+ Y+ ++ VHRD
Sbjct: 250 E-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 305
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ E K+ DFGLAR ED Y + A + +TAPE A+ G + K+D+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+ +
Sbjct: 365 WSFGILLTELTT 376
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 6/191 (3%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE+ K+L + IA G+ Y+ ++ VHRD
Sbjct: 81 E-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---VHRD 136
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
++A+N+L+ E K+ DFGLAR +++ + +TAPE A+ G + K+D++
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 270 SFGVLVLEIIS 280
SFG+L+ E+ +
Sbjct: 197 SFGILLTELTT 207
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 155/342 (45%), Gaps = 55/342 (16%)
Query: 61 FFNGNLRTI---SYFDFQTLKKATKNFHP------------GNLLGRGGFGPVYRGKLA- 104
F NG+L+ +Y D T + T+ H ++G G FG V G+L
Sbjct: 9 FGNGHLKLPGLRTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKL 68
Query: 105 ---DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161
VA+K L V +++ +FL E ++ H N++RL G + ++V EYM
Sbjct: 69 PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 162 KNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDSHTRIVHRDIKASNVLLD 218
+N SLD + +F T Q++ GIA G++YL + + VHRD+ A N+L++
Sbjct: 129 ENGSLDSFLRKHDAQF----TVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILIN 181
Query: 219 EKFQSKIGDFGLARFFPED--QAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVL 276
K+ DFGL+R +D AY + + +T+PE + + +D++S+G+++
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 277 EIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFI 336
E+ M Y W++ + +++ VD R ++ A + +
Sbjct: 242 EV--------------MSYGERPYWEMSNQD-VIKAVDEGYRLPPPMDCPA-ALYQLMLD 285
Query: 337 CLQPHGNQRPPMSEIVAML--------TCKVESGIPVRPAYL 370
C Q N RP +IV++L + K+ + RP+ L
Sbjct: 286 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 155/342 (45%), Gaps = 55/342 (16%)
Query: 61 FFNGNLRTI---SYFDFQTLKKATKNFHP------------GNLLGRGGFGPVYRGKLA- 104
F NG+L+ ++ D T + T+ H ++G G FG V G+L
Sbjct: 9 FGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKL 68
Query: 105 ---DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161
VA+K L V +++ +FL E ++ H N++RL G + ++V EYM
Sbjct: 69 PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 162 KNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDSHTRIVHRDIKASNVLLD 218
+N SLD + +F T Q++ GIA G++YL + + VHRD+ A N+L++
Sbjct: 129 ENGSLDSFLRKHDAQF----TVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILIN 181
Query: 219 EKFQSKIGDFGLARFFPED--QAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVL 276
K+ DFGLAR +D AY + + +T+PE + + +D++S+G+++
Sbjct: 182 SNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 277 EIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFI 336
E+ M Y W++ + +++ VD R ++ A + +
Sbjct: 242 EV--------------MSYGERPYWEMSNQD-VIKAVDEGYRLPPPMDCPA-ALYQLMLD 285
Query: 337 CLQPHGNQRPPMSEIVAML--------TCKVESGIPVRPAYL 370
C Q N RP +IV++L + K+ + RP+ L
Sbjct: 286 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE K+L + IA G+ Y+ ++ VHRD
Sbjct: 84 E-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 139
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ E K+ DFGLAR ED Y + A + +TAPE A+ G + K+D+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+ +
Sbjct: 199 WSFGILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE K+L + IA G+ Y+ ++ VHRD
Sbjct: 73 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 128
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ E K+ DFGLAR ED Y + A + +TAPE A+ G + K+D+
Sbjct: 129 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+ +
Sbjct: 188 WSFGILLTELTT 199
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 16/218 (7%)
Query: 75 QTLKKATKNFHPG-----NLLGRGGFGPVYRGKLADGT-----LVAVKKLCVDKSQQGES 124
Q + K T HP ++G G FG VY+G L + VA+K L +++
Sbjct: 32 QAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV 91
Query: 125 EFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF 184
+FL E ++ H N++RL G S +++ EYM+N +LD + E D +
Sbjct: 92 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR-EKDGEFSVLQLV 150
Query: 185 QIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244
++ GIA G++YL ++ VHRD+ A N+L++ K+ DFGL+R +D T
Sbjct: 151 GMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207
Query: 245 FAGTLG--YTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
G + +TAPE + + +D++SFG+++ E+++
Sbjct: 208 SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 104/192 (54%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE+ K+L + IA G+ Y+ ++ VHRD
Sbjct: 250 E-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 305
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ E K+ DFGLAR ED Y + A + +TAPE A+ G + K+D+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+ +
Sbjct: 365 WSFGILLTELTT 376
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 55/342 (16%)
Query: 61 FFNGNLRTI---SYFDFQTLKKATKNFHP------------GNLLGRGGFGPVYRGKLA- 104
F NG+L+ +Y D T + T+ H ++G G FG V G+L
Sbjct: 9 FGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKL 68
Query: 105 ---DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161
VA+K L V +++ +FL E ++ H N++RL G + ++V EYM
Sbjct: 69 PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 162 KNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDSHTRIVHRDIKASNVLLD 218
+N SLD + +F T Q++ GIA G++YL + + VHRD+ A N+L++
Sbjct: 129 ENGSLDSFLRKHDAQF----TVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILIN 181
Query: 219 EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YTAPEYAIRGELSEKADIYSFGVLVL 276
K+ DFGL+R +D T G + +T+PE + + +D++S+G+++
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 277 EIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFI 336
E+ M Y W++ + +++ VD R ++ A + +
Sbjct: 242 EV--------------MSYGERPYWEMSNQD-VIKAVDEGYRLPPPMDCPA-ALYQLMLD 285
Query: 337 CLQPHGNQRPPMSEIVAML--------TCKVESGIPVRPAYL 370
C Q N RP +IV++L + K+ + RP+ L
Sbjct: 286 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 101/191 (52%), Gaps = 6/191 (3%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE K+L + IA G+ Y+ ++ VHRD
Sbjct: 84 E-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 139
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
++A+N+L+ E K+ DFGLAR +++ + +TAPE A+ G + K+D++
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 270 SFGVLVLEIIS 280
SFG+L+ E+ +
Sbjct: 200 SFGILLTELTT 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE K+L + IA G+ Y+ ++ VHRD
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 139
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ E K+ DFGLAR ED Y + A + +TAPE A+ G + K+D+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+ +
Sbjct: 199 WSFGILLTELTT 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE K+L + IA G+ Y+ ++ VHRD
Sbjct: 75 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 130
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ E K+ DFGLAR ED Y + A + +TAPE A+ G + K+D+
Sbjct: 131 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+ +
Sbjct: 190 WSFGILLTELTT 201
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 55/342 (16%)
Query: 61 FFNGNLRTI---SYFDFQTLKKATKNFHP------------GNLLGRGGFGPVYRGKLA- 104
F NG+L+ +Y D T + T+ H ++G G FG V G+L
Sbjct: 7 FGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKL 66
Query: 105 ---DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161
VA+K L V +++ +FL E ++ H N++RL G + ++V EYM
Sbjct: 67 PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 126
Query: 162 KNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDSHTRIVHRDIKASNVLLD 218
+N SLD + +F T Q++ GIA G++YL + + VHRD+ A N+L++
Sbjct: 127 ENGSLDSFLRKHDAQF----TVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILIN 179
Query: 219 EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YTAPEYAIRGELSEKADIYSFGVLVL 276
K+ DFGL+R +D T G + +T+PE + + +D++S+G+++
Sbjct: 180 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 239
Query: 277 EIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFI 336
E+ M Y W++ + +++ VD R ++ A + +
Sbjct: 240 EV--------------MSYGERPYWEMSNQD-VIKAVDEGYRLPPPMDCPA-ALYQLMLD 283
Query: 337 CLQPHGNQRPPMSEIVAML--------TCKVESGIPVRPAYL 370
C Q N RP +IV++L + K+ + RP+ L
Sbjct: 284 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 325
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE K+L + IA G+ Y+ ++ VHRD
Sbjct: 84 E-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 139
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ E K+ DFGLAR ED Y + A + +TAPE A+ G + K+D+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+ +
Sbjct: 199 WSFGILLTELTT 210
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 115/205 (56%), Gaps = 22/205 (10%)
Query: 89 LLGRGGFGPVYRGKL-ADG---TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
++G G FG V RG+L A G + VA+K L +++ EFLSE ++ +H N++RL
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDS 201
G ++ +++ E+M+N +LD + +F T Q++ GIA G++YL E S
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQF----TVIQLVGMLRGIASGMRYLAEMS 136
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG------YTAPE 255
+ VHRD+ A N+L++ K+ DFGL+RF E+ + + +LG +TAPE
Sbjct: 137 Y---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS--DPTYTSSLGGKIPIRWTAPE 191
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ + +D +S+G+++ E++S
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 55/342 (16%)
Query: 61 FFNGNLRTI---SYFDFQTLKKATKNFHP------------GNLLGRGGFGPVYRGKLA- 104
F NG+L+ ++ D T + T+ H ++G G FG V G+L
Sbjct: 9 FGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKL 68
Query: 105 ---DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161
VA+K L V +++ +FL E ++ H N++RL G + ++V EYM
Sbjct: 69 PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 162 KNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDSHTRIVHRDIKASNVLLD 218
+N SLD + +F T Q++ GIA G++YL S VHRD+ A N+L++
Sbjct: 129 ENGSLDSFLRKHDAQF----TVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILIN 181
Query: 219 EKFQSKIGDFGLARFFPED--QAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVL 276
K+ DFGL+R +D AY + + +T+PE + + +D++S+G+++
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 277 EIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFI 336
E+ M Y W++ + +++ VD R ++ A + +
Sbjct: 242 EV--------------MSYGERPYWEMSNQD-VIKAVDEGYRLPPPMDCPA-ALYQLMLD 285
Query: 337 CLQPHGNQRPPMSEIVAML--------TCKVESGIPVRPAYL 370
C Q N RP +IV++L + K+ + RP+ L
Sbjct: 286 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 155/342 (45%), Gaps = 55/342 (16%)
Query: 61 FFNGNLRTI---SYFDFQTLKKATKNFHP------------GNLLGRGGFGPVYRGKLA- 104
F NG+L+ ++ D T + T+ H ++G G FG V G+L
Sbjct: 9 FGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKL 68
Query: 105 ---DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161
VA+K L V +++ +FL E ++ H N++RL G + ++V EYM
Sbjct: 69 PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 162 KNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDSHTRIVHRDIKASNVLLD 218
+N SLD + +F T Q++ GIA G++YL + + VHRD+ A N+L++
Sbjct: 129 ENGSLDSFLRKHDAQF----TVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILIN 181
Query: 219 EKFQSKIGDFGLARFFPED--QAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVL 276
K+ DFGL+R +D AY + + +T+PE + + +D++S+G+++
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 277 EIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFI 336
E+ M Y W++ + +++ VD R ++ A + +
Sbjct: 242 EV--------------MSYGERPYWEMSNQD-VIKAVDEGYRLPPPMDCPA-ALYQLMLD 285
Query: 337 CLQPHGNQRPPMSEIVAML--------TCKVESGIPVRPAYL 370
C Q N RP +IV++L + K+ + RP+ L
Sbjct: 286 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE K+L + IA G+ Y+ ++ VHRD
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 139
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
+ A+N+L+ E K+ DFGLAR ED Y + A + +TAPE A+ G + K+D+
Sbjct: 140 LAAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+ +
Sbjct: 199 WSFGILLTELTT 210
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 107/206 (51%), Gaps = 16/206 (7%)
Query: 84 FHPGNLLGRGGFGPVYRGKL----ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHK 139
H ++G G G V G+L VA+K L +++ +FLSE ++ H
Sbjct: 51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHP 110
Query: 140 NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQY 196
N++RL G + G ++V EYM+N SLD + +F T Q++ G+ G++Y
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQF----TIMQLVGMLRGVGAGMRY 166
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE--DQAYLSTNFAGTLGYTAP 254
L + + VHRD+ A NVL+D K+ DFGL+R + D AY +T + +TAP
Sbjct: 167 LSDLGY---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAP 223
Query: 255 EYAIRGELSEKADIYSFGVLVLEIIS 280
E S +D++SFGV++ E+++
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM L + GE K+L + IA G+ Y+ ++ VHRD
Sbjct: 84 E-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 139
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ E K+ DFGLAR ED Y + A + +TAPE A+ G + K+D+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+ +
Sbjct: 199 WSFGILLTELTT 210
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 153/342 (44%), Gaps = 55/342 (16%)
Query: 61 FFNGNLRTI---SYFDFQTLKKATKNFHP------------GNLLGRGGFGPVYRGKLA- 104
F NG+L+ ++ D T + T+ H ++G G FG V G+L
Sbjct: 9 FGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKL 68
Query: 105 ---DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161
VA+K L V +++ +FL E ++ H N++RL G + ++V EYM
Sbjct: 69 PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 162 KNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDSHTRIVHRDIKASNVLLD 218
+N SLD + +F T Q++ GIA G++YL + + VHRD+ A N+L++
Sbjct: 129 ENGSLDSFLRKHDAQF----TVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILIN 181
Query: 219 EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YTAPEYAIRGELSEKADIYSFGVLVL 276
K+ DFGL R +D T G + +T+PE + + +D++S+G+++
Sbjct: 182 SNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 277 EIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFI 336
E+ M Y W++ + +++ VD R ++ A + +
Sbjct: 242 EV--------------MSYGERPYWEMSNQD-VIKAVDEGYRLPPPMDCPA-ALYQLMLD 285
Query: 337 CLQPHGNQRPPMSEIVAML--------TCKVESGIPVRPAYL 370
C Q N RP +IV++L + K+ + RP+ L
Sbjct: 286 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 155/342 (45%), Gaps = 55/342 (16%)
Query: 61 FFNGNLRTI---SYFDFQTLKKATKNFHP------------GNLLGRGGFGPVYRGKLA- 104
F NG+L+ ++ D T + T+ H ++G G FG V G+L
Sbjct: 9 FGNGHLKLPGLRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKL 68
Query: 105 ---DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161
VA+K L V +++ +FL E ++ H N++RL G + ++V EYM
Sbjct: 69 PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128
Query: 162 KNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDSHTRIVHRDIKASNVLLD 218
+N SLD + +F T Q++ GIA G++YL + + VHRD+ A N+L++
Sbjct: 129 ENGSLDSFLRKHDAQF----TVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILIN 181
Query: 219 EKFQSKIGDFGLARFFPED--QAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVL 276
K+ DFGL+R +D AY + + +T+PE + + +D++S+G+++
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 277 EIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFI 336
E+ M Y W++ + +++ VD R ++ A + +
Sbjct: 242 EV--------------MSYGERPYWEMSNQD-VIKAVDEGYRLPPPMDCPA-ALYQLMLD 285
Query: 337 CLQPHGNQRPPMSEIVAML--------TCKVESGIPVRPAYL 370
C Q N RP +IV++L + K+ + RP+ L
Sbjct: 286 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 147/318 (46%), Gaps = 45/318 (14%)
Query: 75 QTLKKATKNFHPGNL-----LGRGGFGPVYRGKLA----DGTLVAVKKLCVDKSQQGESE 125
QT+ + K N+ +G G FG V G+L VA+K L V +++ +
Sbjct: 4 QTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 63
Query: 126 FLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
FL E ++ H N++RL G + ++V EYM+N SLD + +F T Q
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF----TVIQ 119
Query: 186 II---LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED--QAY 240
++ GIA G++YL + + VHRD+ A N+L++ K+ DFGL+R +D AY
Sbjct: 120 LVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYA 300
+ + +T+PE + + +D++S+G+++ E+ M Y
Sbjct: 177 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV--------------MSYGERPY 222
Query: 301 WKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML----- 355
W++ + +++ VD R ++ A + + C Q N RP +IV++L
Sbjct: 223 WEMSNQD-VIKAVDEGYRLPPPMDCPA-ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 280
Query: 356 ---TCKVESGIPVRPAYL 370
+ K+ + RP+ L
Sbjct: 281 NPGSLKIITSAAARPSNL 298
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM L + GE K+L + IA G+ Y+ ++ VHRD
Sbjct: 84 E-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 139
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ E K+ DFGLAR ED Y + A + +TAPE A+ G + K+D+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+ +
Sbjct: 199 WSFGILLTELTT 210
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 147/318 (46%), Gaps = 45/318 (14%)
Query: 75 QTLKKATKNFHPGNL-----LGRGGFGPVYRGKLA----DGTLVAVKKLCVDKSQQGESE 125
QT+ + K N+ +G G FG V G+L VA+K L V +++ +
Sbjct: 21 QTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 80
Query: 126 FLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
FL E ++ H N++RL G + ++V EYM+N SLD + +F T Q
Sbjct: 81 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF----TVIQ 136
Query: 186 II---LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED--QAY 240
++ GIA G++YL + + VHRD+ A N+L++ K+ DFGL+R +D AY
Sbjct: 137 LVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 193
Query: 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYA 300
+ + +T+PE + + +D++S+G+++ E+ M Y
Sbjct: 194 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV--------------MSYGERPY 239
Query: 301 WKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML----- 355
W++ + +++ VD R ++ A + + C Q N RP +IV++L
Sbjct: 240 WEMSNQD-VIKAVDEGYRLPPPMDCPA-ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 297
Query: 356 ---TCKVESGIPVRPAYL 370
+ K+ + RP+ L
Sbjct: 298 NPGSLKIITSAAARPSNL 315
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG+G FG V+ G T VA+K L FL E +++ ++H+ LV+L S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTL--KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ +V EYM SL + GE K+L + IA G+ Y+ ++ VHRD
Sbjct: 251 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRD 306
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ E K+ DFGL R ED Y + A + +TAPE A+ G + K+D+
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+ +
Sbjct: 366 WSFGILLTELTT 377
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 116/203 (57%), Gaps = 18/203 (8%)
Query: 89 LLGRGGFGPVYRGKL-ADG---TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
++G G FG V RG+L A G + VA+K L +++ EFLSE ++ +H N++RL
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDS 201
G ++ +++ E+M+N +LD + +F T Q++ GIA G++YL E S
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQF----TVIQLVGMLRGIASGMRYLAEMS 138
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA--YLSTNFAGTLG--YTAPEYA 257
+ VHRD+ A N+L++ K+ DFGL+RF E+ + +++ G + +TAPE
Sbjct: 139 Y---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 258 IRGELSEKADIYSFGVLVLEIIS 280
+ + +D +S+G+++ E++S
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ G T VAVK L + FL+E ++ +QH+ LVRL +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM+N SL + S L + + IA G+ ++ E ++ +HRD
Sbjct: 89 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 144
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ + KI DFGLAR ED Y + A + +TAPE G + K+D+
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 203
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ EI++
Sbjct: 204 WSFGILLTEIVT 215
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ G T VAVK L + FL+E ++ +QH+ LVRL +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM+N SL + S L + + IA G+ ++ E ++ +HRD
Sbjct: 88 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 143
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
++A+N+L+ + KI DFGLAR +++ + +TAPE G + K+D++
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 203
Query: 270 SFGVLVLEIIS 280
SFG+L+ EI++
Sbjct: 204 SFGILLTEIVT 214
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ G T VAVK L + FL+E ++ +QH+ LVRL +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM+N SL + S L + + IA G+ ++ E ++ +HRD
Sbjct: 85 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 140
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ + KI DFGLAR ED Y + A + +TAPE G + K+D+
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ EI++
Sbjct: 200 WSFGILLTEIVT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ G T VAVK L + FL+E ++ +QH+ LVRL +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM+N SL + S L + + IA G+ ++ E ++ +HRD
Sbjct: 87 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 142
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
++A+N+L+ + KI DFGLAR +++ + +TAPE G + K+D++
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 202
Query: 270 SFGVLVLEIIS 280
SFG+L+ EI++
Sbjct: 203 SFGILLTEIVT 213
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ G T VAVK L + FL+E ++ +QH+ LVRL +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 83
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM+N SL + S L + + IA G+ ++ E ++ +HRD
Sbjct: 84 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 139
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ + KI DFGLAR ED Y + A + +TAPE G + K+D+
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 198
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ EI++
Sbjct: 199 WSFGILLTEIVT 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ G T VAVK L + FL+E ++ +QH+ LVRL +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM+N SL + S L + + IA G+ ++ E ++ +HRD
Sbjct: 85 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 140
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
++A+N+L+ + KI DFGLAR +++ + +TAPE G + K+D++
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 270 SFGVLVLEIIS 280
SFG+L+ EI++
Sbjct: 201 SFGILLTEIVT 211
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ G T VAVK L + FL+E ++ +QH+ LVRL +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM+N SL + S L + + IA G+ ++ E ++ +HRD
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 134
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
++A+N+L+ + KI DFGLAR +++ + +TAPE G + K+D++
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 270 SFGVLVLEIIS 280
SFG+L+ EI++
Sbjct: 195 SFGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ G T VAVK L + FL+E ++ +QH+ LVRL +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 80
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM+N SL + S L + + IA G+ ++ E ++ +HRD
Sbjct: 81 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 136
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
++A+N+L+ + KI DFGLAR +++ + +TAPE G + K+D++
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 196
Query: 270 SFGVLVLEIIS 280
SFG+L+ EI++
Sbjct: 197 SFGILLTEIVT 207
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ G T VAVK L + FL+E ++ +QH+ LVRL +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM+N SL + S L + + IA G+ ++ E ++ +HRD
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 134
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
++A+N+L+ + KI DFGLAR +++ + +TAPE G + K+D++
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 270 SFGVLVLEIIS 280
SFG+L+ EI++
Sbjct: 195 SFGILLTEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ G T VAVK L + FL+E ++ +QH+ LVRL +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM+N SL + S L + + IA G+ ++ E ++ +HRD
Sbjct: 80 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 135
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
++A+N+L+ + KI DFGLAR +++ + +TAPE G + K+D++
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
Query: 270 SFGVLVLEIIS 280
SFG+L+ EI++
Sbjct: 196 SFGILLTEIVT 206
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 16/206 (7%)
Query: 84 FHPGNLLGRGGFGPVYRGKL----ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHK 139
H ++G G G V G+L VA+K L +++ +FLSE ++ H
Sbjct: 51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHP 110
Query: 140 NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQY 196
N++RL G + G ++V EYM+N SLD + +F T Q++ G+ G++Y
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQF----TIMQLVGMLRGVGAGMRY 166
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YTAP 254
L + + VHRD+ A NVL+D K+ DFGL+R +D T G + +TAP
Sbjct: 167 LSDLGY---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAP 223
Query: 255 EYAIRGELSEKADIYSFGVLVLEIIS 280
E S +D++SFGV++ E+++
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 153/342 (44%), Gaps = 55/342 (16%)
Query: 61 FFNGNLRTI---SYFDFQTLKKATKNFHP------------GNLLGRGGFGPVYRGKLA- 104
F NG+L+ +Y D T + T+ H ++G G FG V G+L
Sbjct: 9 FGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKL 68
Query: 105 ---DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161
VA+K L V +++ +FL E ++ H N++RL G + ++V E M
Sbjct: 69 PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXM 128
Query: 162 KNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDSHTRIVHRDIKASNVLLD 218
+N SLD + +F T Q++ GIA G++YL + + VHRD+ A N+L++
Sbjct: 129 ENGSLDSFLRKHDAQF----TVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILIN 181
Query: 219 EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YTAPEYAIRGELSEKADIYSFGVLVL 276
K+ DFGL+R +D T G + +T+PE + + +D++S+G+++
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 277 EIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFI 336
E+ M Y W++ + +++ VD R ++ A + +
Sbjct: 242 EV--------------MSYGERPYWEMSNQD-VIKAVDEGYRLPPPMDCPA-ALYQLMLD 285
Query: 337 CLQPHGNQRPPMSEIVAML--------TCKVESGIPVRPAYL 370
C Q N RP +IV++L + K+ + RP+ L
Sbjct: 286 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ G T VAVK L + FL+E ++ +QH+ LVRL +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM+N SL + S L + + IA G+ ++ E ++ +HRD
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 134
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ + KI DFGLAR ED Y + A + +TAPE G + K+D+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ EI++
Sbjct: 194 WSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ G T VAVK L + FL+E ++ +QH+ LVRL +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM+N SL + S L + + IA G+ ++ E ++ +HRD
Sbjct: 74 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 129
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ + KI DFGLAR ED Y + A + +TAPE G + K+D+
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 188
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ EI++
Sbjct: 189 WSFGILLTEIVT 200
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 152/342 (44%), Gaps = 55/342 (16%)
Query: 61 FFNGNLRTI---SYFDFQTLKKATKNFHP------------GNLLGRGGFGPVYRGKLA- 104
F NG+L+ ++ D T + T+ H ++G G FG V G+L
Sbjct: 9 FGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKL 68
Query: 105 ---DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYM 161
VA+K L V +++ +FL E ++ H N++RL G + ++V E M
Sbjct: 69 PSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXM 128
Query: 162 KNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDSHTRIVHRDIKASNVLLD 218
+N SLD + +F T Q++ GIA G++YL S VHRD+ A N+L++
Sbjct: 129 ENGSLDSFLRKHDAQF----TVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILIN 181
Query: 219 EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YTAPEYAIRGELSEKADIYSFGVLVL 276
K+ DFGL+R +D T G + +T+PE + + +D++S+G+++
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241
Query: 277 EIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFI 336
E+ M Y W++ + +++ VD R ++ A + +
Sbjct: 242 EV--------------MSYGERPYWEMSNQD-VIKAVDEGYRLPPPMDCPA-ALYQLMLD 285
Query: 337 CLQPHGNQRPPMSEIVAML--------TCKVESGIPVRPAYL 370
C Q N RP +IV++L + K+ + RP+ L
Sbjct: 286 CWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 107/206 (51%), Gaps = 24/206 (11%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQ---QGESEFLSEVRMITSIQHKNLVRLL 145
++G GGFG VYR G VAVK D + Q E ++ ++H N++ L
Sbjct: 14 IIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGE---SDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C LV E+ + L+ ++ G+ D +NW+ + IARG+ YLH+++
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDEAI 126
Query: 203 TRIVHRDIKASNVLLDEKFQS--------KIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
I+HRD+K+SN+L+ +K ++ KI DFGLAR E + AG + AP
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---EWHRTTKMSAAGAYAWMAP 183
Query: 255 EYAIRGELSEKADIYSFGVLVLEIIS 280
E S+ +D++S+GVL+ E+++
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLT 209
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 135/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G++Y
Sbjct: 88 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 143
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT---LGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + + Y N G + + A
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 250
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 251 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 287
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 135/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G++Y
Sbjct: 92 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 147
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT---LGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + + Y N G + + A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 254
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 255 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 135/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G++Y
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 148
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT---LGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + + Y N G + + A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 255
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 256 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 135/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G++Y
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 148
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT---LGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + + Y N G + + A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 255
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 256 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 135/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G++Y
Sbjct: 91 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 146
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT---LGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + + Y N G + + A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 253
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 254 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 135/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G++Y
Sbjct: 112 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 167
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT---LGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + + Y N G + + A
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 274
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 275 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 311
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 135/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G++Y
Sbjct: 90 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 145
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT---LGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + + Y N G + + A
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 252
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 253 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 289
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 135/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G++Y
Sbjct: 85 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 140
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT---LGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + + Y N G + + A
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 247
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 248 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 284
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 135/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G++Y
Sbjct: 111 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 166
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT---LGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + + Y N G + + A
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 273
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 274 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 310
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 131/276 (47%), Gaps = 32/276 (11%)
Query: 89 LLGRGGFGPVYRGKLA----DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
++G G FG V G+L VA+K L V +++ +FL E ++ H N++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDS 201
G + ++V EYM+N SLD + +F T Q++ GI+ G++YL +
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQF----TVIQLVGMLRGISAGMKYLSDMG 144
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YTAPEYAIR 259
+ VHRD+ A N+L++ K+ DFGL+R +D T G + +TAPE
Sbjct: 145 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF 201
Query: 260 GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRK 319
+ + +D++S+G+++ E++S Y W++ + +++ V+ R
Sbjct: 202 RKFTSASDVWSYGIVMWEVVS--------------YGERPYWEMTNQD-VIKAVEEGYRL 246
Query: 320 EGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355
++ A + + C Q N RP EIV ML
Sbjct: 247 PSPMDCPA-ALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 146/318 (45%), Gaps = 45/318 (14%)
Query: 75 QTLKKATKNFHPGNL-----LGRGGFGPVYRGKLA----DGTLVAVKKLCVDKSQQGESE 125
QT+ + K N+ +G G FG V G+L VA+K L V +++ +
Sbjct: 4 QTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 63
Query: 126 FLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
FL E ++ H N++RL G + ++V E M+N SLD + +F T Q
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF----TVIQ 119
Query: 186 II---LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED--QAY 240
++ GIA G++YL + + VHRD+ A N+L++ K+ DFGL+R +D AY
Sbjct: 120 LVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAY 176
Query: 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYA 300
+ + +T+PE + + +D++S+G+++ E+ M Y
Sbjct: 177 TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV--------------MSYGERPY 222
Query: 301 WKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML----- 355
W++ + +++ VD R ++ A + + C Q N RP +IV++L
Sbjct: 223 WEMSNQD-VIKAVDEGYRLPPPMDCPA-ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 280
Query: 356 ---TCKVESGIPVRPAYL 370
+ K+ + RP+ L
Sbjct: 281 NPGSLKIITSAAARPSNL 298
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ G T VAVK L + FL+E ++ +QH+ LVRL +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM+N SL + S L + + IA G+ ++ E ++ +HR+
Sbjct: 75 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRN 130
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADI 268
++A+N+L+ + KI DFGLAR ED Y + A + +TAPE G + K+D+
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 189
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ EI++
Sbjct: 190 WSFGILLTEIVT 201
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 100/196 (51%), Gaps = 6/196 (3%)
Query: 87 GNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
G +GRG FG V+ G+L AD TLVAVK +++FL E R++ H N+VRL+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G C+ +V E ++ + E + L T Q++ A G++YL
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT-LGYTAPEYAIRGELSE 264
+HRD+ A N L+ EK KI DFG++R + S + +TAPE G S
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 265 KADIYSFGVLVLEIIS 280
++D++SFG+L+ E S
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 99/196 (50%), Gaps = 9/196 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ G + T VAVK L FL E ++ ++QH LVRL +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTL--KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 150 DGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
++ EYM SL D L E K L IA G+ Y+ ++ +HR
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY---IHR 134
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKAD 267
D++A+NVL+ E KI DFGLAR ED Y + A + +TAPE G + K+D
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 268 IYSFGVLVLEIISCRK 283
++SFG+L+ EI++ K
Sbjct: 194 VWSFGILLYEIVTYGK 209
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 102/197 (51%), Gaps = 8/197 (4%)
Query: 87 GNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
G +GRG FG V+ G+L AD TLVAVK +++FL E R++ H N+VRL+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G C+ +V E ++ + E + L T Q++ A G++YL
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF--AGTLGYTAPEYAIRGELS 263
+HRD+ A N L+ EK KI DFG++R D Y ++ + +TAPE G S
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 264 EKADIYSFGVLVLEIIS 280
++D++SFG+L+ E S
Sbjct: 294 SESDVWSFGILLWETFS 310
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 107/201 (53%), Gaps = 16/201 (7%)
Query: 89 LLGRGGFGPVYRGKLA----DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
++G G FG V G+L VA+K L V +++ +FL E ++ H N+V L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDS 201
G + G ++V E+M+N +LD + +F T Q++ GIA G++YL +
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQF----TVIQLVGMLRGIAAGMRYLADMG 165
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YTAPEYAIR 259
+ VHRD+ A N+L++ K+ DFGL+R +D + T G + +TAPE
Sbjct: 166 Y---VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 260 GELSEKADIYSFGVLVLEIIS 280
+ + +D++S+G+++ E++S
Sbjct: 223 RKFTSASDVWSYGIVMWEVMS 243
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 126/274 (45%), Gaps = 22/274 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
+G G FG V+ G + VA+K + + E +F+ E ++ + H LV+L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKT--IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ + LV+E+M++ L + + F T + L + G+ YL E S ++HRD
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAS---VIHRD 128
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
+ A N L+ E K+ DFG+ RF +DQ ST + + +PE S K+D++
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 270 SFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQ 329
SFGVL+ E+ S K +P E + E + R L PR+ + Q
Sbjct: 189 SFGVLMWEVFSEGK-----IPYENRSNSEVVEDISTGFR---LYKPRLASTHV-----YQ 235
Query: 330 VINVAFICLQPHGNQRPPMSEIVAMLTCKVESGI 363
++N C + RP S ++ L SG+
Sbjct: 236 IMN---HCWKERPEDRPAFSRLLRQLAAIAASGL 266
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 134/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G++Y
Sbjct: 92 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKY 147
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT---LGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + + N G + + A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 254
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 255 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 126/274 (45%), Gaps = 22/274 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
+G G FG V+ G + VA+K + + E +F+ E ++ + H LV+L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKT--IKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ + LV+E+M++ L + + F T + L + G+ YL E ++HRD
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHRD 148
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
+ A N L+ E K+ DFG+ RF +DQ ST + + +PE S K+D++
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 270 SFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQ 329
SFGVL+ E+ S K +P E + E + R L PR+ + Q
Sbjct: 209 SFGVLMWEVFSEGK-----IPYENRSNSEVVEDISTGFR---LYKPRLASTHV-----YQ 255
Query: 330 VINVAFICLQPHGNQRPPMSEIVAMLTCKVESGI 363
++N C + RP S ++ L ESG+
Sbjct: 256 IMN---HCWKERPEDRPAFSRLLRQLAEIAESGL 286
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 126/274 (45%), Gaps = 22/274 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
+G G FG V+ G + VA+K + + E +F+ E ++ + H LV+L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKT--IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ + LV+E+M++ L + + F T + L + G+ YL E ++HRD
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHRD 126
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
+ A N L+ E K+ DFG+ RF +DQ ST + + +PE S K+D++
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 186
Query: 270 SFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQ 329
SFGVL+ E+ S K +P E + E + R L PR+ + Q
Sbjct: 187 SFGVLMWEVFSEGK-----IPYENRSNSEVVEDISTGFR---LYKPRLASTHV-----YQ 233
Query: 330 VINVAFICLQPHGNQRPPMSEIVAMLTCKVESGI 363
++N C + RP S ++ L ESG+
Sbjct: 234 IMN---HCWKERPEDRPAFSRLLRQLAEIAESGL 264
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 98/191 (51%), Gaps = 6/191 (3%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G G V+ G T VAVK L + FL+E ++ +QH+ LVRL +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM+N SL + S L + + IA G+ ++ E ++ +HRD
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRD 134
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
++A+N+L+ + KI DFGLAR + + + +TAPE G + K+D++
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 270 SFGVLVLEIIS 280
SFG+L+ EI++
Sbjct: 195 SFGILLTEIVT 205
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 126/274 (45%), Gaps = 22/274 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
+G G FG V+ G + VA+K + + E +F+ E ++ + H LV+L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKT--IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ + LV+E+M++ L + + F T + L + G+ YL E ++HRD
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHRD 128
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
+ A N L+ E K+ DFG+ RF +DQ ST + + +PE S K+D++
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 270 SFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQ 329
SFGVL+ E+ S K +P E + E + R L PR+ + Q
Sbjct: 189 SFGVLMWEVFSEGK-----IPYENRSNSEVVEDISTGFR---LYKPRLASTHV-----YQ 235
Query: 330 VINVAFICLQPHGNQRPPMSEIVAMLTCKVESGI 363
++N C + RP S ++ L ESG+
Sbjct: 236 IMN---HCWKERPEDRPAFSRLLRQLAEIAESGL 266
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 126/274 (45%), Gaps = 22/274 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
+G G FG V+ G + VA+K + + E +F+ E ++ + H LV+L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKT--IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ + LV+E+M++ L + + F T + L + G+ YL E ++HRD
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHRD 131
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
+ A N L+ E K+ DFG+ RF +DQ ST + + +PE S K+D++
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 191
Query: 270 SFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQ 329
SFGVL+ E+ S K +P E + E + R L PR+ + Q
Sbjct: 192 SFGVLMWEVFSEGK-----IPYENRSNSEVVEDISTGFR---LYKPRLASTHV-----YQ 238
Query: 330 VINVAFICLQPHGNQRPPMSEIVAMLTCKVESGI 363
++N C + RP S ++ L ESG+
Sbjct: 239 IMN---HCWRERPEDRPAFSRLLRQLAEIAESGL 269
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 99/196 (50%), Gaps = 9/196 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ G + T VAVK L FL E ++ ++QH LVRL +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTL--KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 150 DGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
++ E+M SL D L E K L IA G+ Y+ ++ +HR
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY---IHR 133
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKAD 267
D++A+NVL+ E KI DFGLAR ED Y + A + +TAPE G + K++
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSN 192
Query: 268 IYSFGVLVLEIISCRK 283
++SFG+L+ EI++ K
Sbjct: 193 VWSFGILLYEIVTYGK 208
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 16/201 (7%)
Query: 89 LLGRGGFGPVYRGKLA----DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
++G G FG V G+L VA+K L + + +FLSE ++ H N++ L
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDS 201
G + +++ EYM+N SLD + +F T Q++ GI G++YL + S
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF----TVIQLVGMLRGIGSGMKYLSDMS 130
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPED--QAYLSTNFAGTLGYTAPEYAIR 259
+ VHRD+ A N+L++ K+ DFG++R +D AY + + +TAPE
Sbjct: 131 Y---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 260 GELSEKADIYSFGVLVLEIIS 280
+ + +D++S+G+++ E++S
Sbjct: 188 RKFTSASDVWSYGIVMWEVMS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 16/201 (7%)
Query: 89 LLGRGGFGPVYRGKLA----DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
++G G FG V G+L VA+K L + + +FLSE ++ H N++ L
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDS 201
G + +++ EYM+N SLD + +F T Q++ GI G++YL + S
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF----TVIQLVGMLRGIGSGMKYLSDMS 136
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YTAPEYAIR 259
+ VHRD+ A N+L++ K+ DFG++R +D T G + +TAPE
Sbjct: 137 Y---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 260 GELSEKADIYSFGVLVLEIIS 280
+ + +D++S+G+++ E++S
Sbjct: 194 RKFTSASDVWSYGIVMWEVMS 214
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 108/205 (52%), Gaps = 22/205 (10%)
Query: 89 LLGRGGFGPVYRGKLA----DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
++G G FG V G L VA+K L +++ +FLSE ++ H N++ L
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDS 201
G + + +++ E+M+N SLD + +F T Q++ GIA G++YL + +
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF----TVIQLVGMLRGIAAGMKYLADMN 155
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG------YTAPE 255
+ VHRD+ A N+L++ K+ DFGL+RF +D + + LG +TAPE
Sbjct: 156 Y---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS--DPTYTSALGGKIPIRWTAPE 210
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ + +D++S+G+++ E++S
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 134/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G+++
Sbjct: 91 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKF 146
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE---DQAYLSTNFAGTLGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + D + T + + A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 253
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 254 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 134/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G+++
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKF 148
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE---DQAYLSTNFAGTLGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + D + T + + A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 255
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 256 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 134/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G+++
Sbjct: 94 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKF 149
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE---DQAYLSTNFAGTLGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + D + T + + A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 256
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 257 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 293
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 134/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G+++
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKF 148
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE---DQAYLSTNFAGTLGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + D + T + + A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 255
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 256 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 134/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G+++
Sbjct: 94 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKF 149
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE---DQAYLSTNFAGTLGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + D + T + + A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 256
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 257 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 293
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 134/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G+++
Sbjct: 98 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKF 153
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE---DQAYLSTNFAGTLGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + D + T + + A
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 260
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 261 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 297
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 125/274 (45%), Gaps = 22/274 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
+G G FG V+ G + VA+K + + E +F+ E ++ + H LV+L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKT--IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
+ + LV E+M++ L + + F T + L + G+ YL E ++HRD
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC---VIHRD 129
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
+ A N L+ E K+ DFG+ RF +DQ ST + + +PE S K+D++
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 189
Query: 270 SFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQ 329
SFGVL+ E+ S K +P E + E + R L PR+ + Q
Sbjct: 190 SFGVLMWEVFSEGK-----IPYENRSNSEVVEDISTGFR---LYKPRLASTHV-----YQ 236
Query: 330 VINVAFICLQPHGNQRPPMSEIVAMLTCKVESGI 363
++N C + RP S ++ L ESG+
Sbjct: 237 IMN---HCWRERPEDRPAFSRLLRQLAEIAESGL 267
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 134/287 (46%), Gaps = 41/287 (14%)
Query: 90 LGRGGFGPVYRGKL------ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG V+ + D LVAVK L D + +F E ++T++QH+++V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKAL-KDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLD-----------LLIYGESDKF---LNWSTRFQIILG 189
G C DG ++V+EYMK+ L+ +L+ G+ + L S I
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR-FFPEDQAYLSTNFAGT 248
IA G+ YL + VHRD+ N L+ KIGDFG++R + D + +
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 249 LGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGR 308
+ + PE + + + ++D++SFGV++ EI + K L S + + + +GR
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQL-SNTEVI-----ECITQGR 252
Query: 309 ILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355
+LE PR+ + +V +V C Q QR + EI +L
Sbjct: 253 VLE--RPRVCPK--------EVYDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 134/285 (47%), Gaps = 38/285 (13%)
Query: 85 HPGNLLGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++GRG FG VY G L D AVK L S+FL+E ++ H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 141 LVRLLGCC--SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQY 196
++ LLG C S+GS L+V YMK+ L I E+ N + + I G +A+G+++
Sbjct: 152 VLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKF 207
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE---DQAYLSTNFAGTLGYTA 253
L + + VHRD+ A N +LDEKF K+ DFGLAR + D + T + + A
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS--CRKNTDLTLPSEMQYLPEYAWKLYERGRILE 311
E + + K+D++SFGVL+ E+++ D+ YL + GR
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--------GR--R 314
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
L+ P + + E V C P RP SE+V+ ++
Sbjct: 315 LLQPEYCPDPLYE--------VMLKCWHPKAEMRPSFSELVSRIS 351
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 8/192 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ G T VA+K L FL E +++ ++H LV+L S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTL--KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 150 DGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ +V EYM SL D L GE + L + +A G+ Y+ ++ +HR
Sbjct: 75 E-EPIYIVTEYMNKGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIERMNY---IHR 129
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D++++N+L+ KI DFGLAR +++ + +TAPE A+ G + K+D+
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 269 YSFGVLVLEIIS 280
+SFG+L+ E+++
Sbjct: 190 WSFGILLTELVT 201
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 16/201 (7%)
Query: 89 LLGRGGFGPVYRGKLA----DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
++G G FG V G+L VA+K L + + +FLSE ++ H N++ L
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDS 201
G + +++ EYM+N SLD + +F T Q++ GI G++YL + S
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF----TVIQLVGMLRGIGSGMKYLSDMS 151
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YTAPEYAIR 259
VHRD+ A N+L++ K+ DFG++R +D T G + +TAPE
Sbjct: 152 A---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 208
Query: 260 GELSEKADIYSFGVLVLEIIS 280
+ + +D++S+G+++ E++S
Sbjct: 209 RKFTSASDVWSYGIVMWEVMS 229
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 90 LGRGGFGPVYRGKL------ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG V+ + D LVAVK L D S +F E ++T++QH+++V+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTL-KDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLD-----------LLIYGESDKFLNWSTRFQIILGIAR 192
G C +G ++V+EYMK+ L+ L+ G L S I IA
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR-FFPEDQAYLSTNFAGTLGY 251
G+ YL + VHRD+ N L+ E KIGDFG++R + D + + + +
Sbjct: 140 GMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 252 TAPEYAIRGELSEKADIYSFGVLVLEIIS 280
PE + + + ++D++S GV++ EI +
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 22/205 (10%)
Query: 89 LLGRGGFGPVYRGKLA----DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
++G G FG V G L VA+K L +++ +FLSE ++ H N++ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII---LGIARGLQYLHEDS 201
G + + +++ E+M+N SLD + +F T Q++ GIA G++YL + +
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF----TVIQLVGMLRGIAAGMKYLADMN 129
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG------YTAPE 255
+ VHR + A N+L++ K+ DFGL+RF +D + + LG +TAPE
Sbjct: 130 Y---VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTS--DPTYTSALGGKIPIRWTAPE 184
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ + +D++S+G+++ E++S
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + +N + I+ ++YL + + +HR
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHR 140
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 243
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 244 EK----VYELMRACWQWNPSDRPSFAEI 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + +N + I+ ++YL + + +HR
Sbjct: 80 TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHR 136
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 197 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 239
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 240 EK----VYELMRACWQWNPSDRPSFAEI 263
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + +N + I+ ++YL + + +HR
Sbjct: 84 TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHR 140
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 243
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 244 EK----VYELMRACWQWNPSDRPSFAEI 267
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 130/270 (48%), Gaps = 27/270 (10%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
++GRG FG V + K VA+K++ +S+ F+ E+R ++ + H N+V+L G C
Sbjct: 16 VVGRGAFGVVCKAKW-RAKDVAIKQI---ESESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYG-ESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVH 207
+ LV EY + SL +++G E + + L ++G+ YLH ++H
Sbjct: 72 LN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 208 RDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKA 266
RD+K N+LL KI DFG A + Q ++ TN G+ + APE SEK
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHM-TNNKGSAAWMAPEVFEGSNYSEKC 185
Query: 267 DIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERD 326
D++S+G+++ E+I+ RK D + + W ++ R + + E ++ R
Sbjct: 186 DVFSWGIILWEVITRRKPFDEIGGPAFRIM----WAVHNGTRPPLIKNLPKPIESLMTR- 240
Query: 327 ALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
C +QRP M EIV ++T
Sbjct: 241 ----------CWSKDPSQRPSMEEIVKIMT 260
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 22/257 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V GK VA+K + + E EF+ E +++ ++ H+ LV+L G C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIK--MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM N L + +F ++ + ++YL + +HRD
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRD 145
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
+ A N L++++ K+ DFGL+R+ +D+ S + ++ PE + + S K+DI+
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 270 SFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQ 329
+FGVL+ EI S K +P E E A + + L L P + E +
Sbjct: 206 AFGVLMWEIYSLGK-----MPYERFTNSETAEHI---AQGLRLYRPHLASE--------K 249
Query: 330 VINVAFICLQPHGNQRP 346
V + + C ++RP
Sbjct: 250 VYTIMYSCWHEKADERP 266
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + +N + I+ ++YL + + +HR
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHR 140
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 243
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 244 EK----VYELMRACWQWNPSDRPSFAEI 267
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 9/206 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V GK VAVK + + E EF E + + + H LV+ G CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKM--IKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESD-KFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+V EY+ N L L Y S K L S ++ + G+ +L +SH + +HR
Sbjct: 74 KEYPIYIVTEYISNGCL--LNYLRSHGKGLEPSQLLEMCYDVCEGMAFL--ESH-QFIHR 128
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+D K+ DFG+ R+ +DQ S + ++APE + S K+D+
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 269 YSFGVLVLEIISCRKN-TDLTLPSEM 293
++FG+L+ E+ S K DL SE+
Sbjct: 189 WAFGILMWEVFSLGKMPYDLYTNSEV 214
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 130/270 (48%), Gaps = 27/270 (10%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
++GRG FG V + K VA+K++ +S+ F+ E+R ++ + H N+V+L G C
Sbjct: 15 VVGRGAFGVVCKAKW-RAKDVAIKQI---ESESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYG-ESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVH 207
+ LV EY + SL +++G E + + L ++G+ YLH ++H
Sbjct: 71 LN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 208 RDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKA 266
RD+K N+LL KI DFG A + Q ++ TN G+ + APE SEK
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHM-TNNKGSAAWMAPEVFEGSNYSEKC 184
Query: 267 DIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERD 326
D++S+G+++ E+I+ RK D + + W ++ R + + E ++ R
Sbjct: 185 DVFSWGIILWEVITRRKPFDEIGGPAFRIM----WAVHNGTRPPLIKNLPKPIESLMTR- 239
Query: 327 ALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
C +QRP M EIV ++T
Sbjct: 240 ----------CWSKDPSQRPSMEEIVKIMT 259
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 82
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + +N + I+ ++YL + + +HR
Sbjct: 83 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHR 139
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 200 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 242
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 243 EK----VYELMRACWQWNPSDRPSFAEI 266
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + +N + I+ ++YL + + +HR
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHR 135
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 238
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 239 EK----VYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + +N + I+ ++YL + + +HR
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHR 135
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 238
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 239 EK----VYELMRACWQWNPSDRPSFAEI 262
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 22/257 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V GK VA+K + + E EF+ E +++ ++ H+ LV+L G C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIK--MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM N L + +F ++ + ++YL + +HRD
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRD 129
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
+ A N L++++ K+ DFGL+R+ +D+ S + ++ PE + + S K+DI+
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 189
Query: 270 SFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQ 329
+FGVL+ EI S K +P E E A + + L L P + E +
Sbjct: 190 AFGVLMWEIYSLGK-----MPYERFTNSETAEHI---AQGLRLYRPHLASE--------K 233
Query: 330 VINVAFICLQPHGNQRP 346
V + + C ++RP
Sbjct: 234 VYTIMYSCWHEKADERP 250
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 22/257 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V GK VA+K + + E EF+ E +++ ++ H+ LV+L G C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK--MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM N L + +F ++ + ++YL + +HRD
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRD 130
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
+ A N L++++ K+ DFGL+R+ +D+ S + ++ PE + + S K+DI+
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 270 SFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQ 329
+FGVL+ EI S K +P E E A + + L L P + E +
Sbjct: 191 AFGVLMWEIYSLGK-----MPYERFTNSETAEHI---AQGLRLYRPHLASE--------K 234
Query: 330 VINVAFICLQPHGNQRP 346
V + + C ++RP
Sbjct: 235 VYTIMYSCWHEKADERP 251
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + +N + I+ ++YL + + +HR
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHR 137
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 198 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 240
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 241 EK----VYELMRACWQWNPSDRPSFAEI 264
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + +N + I+ ++YL + + +HR
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHR 137
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 198 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 240
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 241 EK----VYELMRACWQWNPSDRPSFAEI 264
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + +N + I+ ++YL + + +HR
Sbjct: 80 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHR 136
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 197 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 239
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 240 EK----VYELMRACWQWNPSDRPSFAEI 263
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 22/257 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V GK VA+K + + E EF+ E +++ ++ H+ LV+L G C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIK--MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM N L + +F ++ + ++YL + +HRD
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRD 145
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
+ A N L++++ K+ DFGL+R+ +D+ S + ++ PE + + S K+DI+
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 270 SFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQ 329
+FGVL+ EI S K +P E E A + + L L P + E +
Sbjct: 206 AFGVLMWEIYSLGK-----MPYERFTNSETAEHI---AQGLRLYRPHLASE--------K 249
Query: 330 VINVAFICLQPHGNQRP 346
V + + C ++RP
Sbjct: 250 VYTIMYSCWHEKADERP 266
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 22/257 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V GK VA+K + + E EF+ E +++ ++ H+ LV+L G C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM N L + +F ++ + ++YL + +HRD
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRD 125
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
+ A N L++++ K+ DFGL+R+ +D+ S + ++ PE + + S K+DI+
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
Query: 270 SFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQ 329
+FGVL+ EI S K +P E E A + + L L P + E +
Sbjct: 186 AFGVLMWEIYSLGK-----MPYERFTNSETAEHI---AQGLRLYRPHLASE--------K 229
Query: 330 VINVAFICLQPHGNQRP 346
V + + C ++RP
Sbjct: 230 VYTIMYSCWHEKADERP 246
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + +N + I+ ++YL + + +HR
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHR 140
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 243
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 244 EK----VYELMRACWQWNPSDRPSFAEI 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 91
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + +N + I+ ++YL + + +HR
Sbjct: 92 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHR 148
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 149 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 208
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 209 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 251
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 252 EK----VYELMRACWQWNPSDRPSFAEI 275
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + +N + I+ ++YL + + +HR
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHR 137
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 198 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 240
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 241 EK----VYELMRACWQWNPSDRPSFAEI 264
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 22/257 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V GK VA+K + + E EF+ E +++ ++ H+ LV+L G C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIK--MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM N L + +F ++ + ++YL + +HRD
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRD 136
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
+ A N L++++ K+ DFGL+R+ +D+ S + ++ PE + + S K+DI+
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 196
Query: 270 SFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQ 329
+FGVL+ EI S K +P E E A + + L L P + E +
Sbjct: 197 AFGVLMWEIYSLGK-----MPYERFTNSETAEHI---AQGLRLYRPHLASE--------K 240
Query: 330 VINVAFICLQPHGNQRP 346
V + + C ++RP
Sbjct: 241 VYTIMYSCWHEKADERP 257
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 24/264 (9%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G FG VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + ++ + I+ ++YL + + +HR
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHR 133
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 269 YSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIVERDA 327
++FGVL+ EI + + + P ++L E+ D RM R EG E+
Sbjct: 194 WAFGVLLWEIATYGMSPYPGID------PSQVYELLEK-------DYRMERPEGCPEK-- 238
Query: 328 LQVINVAFICLQPHGNQRPPMSEI 351
V + C Q + + RP +EI
Sbjct: 239 --VYELMRACWQWNPSDRPSFAEI 260
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 22/257 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V GK VA+K + + E EF+ E +++ ++ H+ LV+L G C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK--MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
++ EYM N L + +F ++ + ++YL + +HRD
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQFLHRD 130
Query: 210 IKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIY 269
+ A N L++++ K+ DFGL+R+ +D+ S + ++ PE + + S K+DI+
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 270 SFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQ 329
+FGVL+ EI S K +P E E A + + L L P + E +
Sbjct: 191 AFGVLMWEIYSLGK-----MPYERFTNSETAEHI---AQGLRLYRPHLASE--------K 234
Query: 330 VINVAFICLQPHGNQRP 346
V + + C ++RP
Sbjct: 235 VYTIMYSCWHEKADERP 251
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G +VAVKKL +++ +F E+ ++ S+QH N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C +R L+ EY+ SL + ++ ++ Q I +G++YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL---GT 132
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRG 260
R +HRD+ N+L++ + + KIGDFGL + P+D+ + G + + APE
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ S +D++SFGV++ E+ +
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 282
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + +N + I+ ++YL + + +HR
Sbjct: 283 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHR 339
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
++ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 340 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 399
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 400 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 442
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 443 EK----VYELMRACWQWNPSDRPSFAEI 466
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 24/264 (9%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + ++ + I+ ++YL + + +HR
Sbjct: 77 TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHR 133
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 269 YSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIVERDA 327
++FGVL+ EI + + + P ++L E+ D RM R EG E+
Sbjct: 194 WAFGVLLWEIATYGMSPYPGID------PSQVYELLEK-------DYRMERPEGCPEK-- 238
Query: 328 LQVINVAFICLQPHGNQRPPMSEI 351
V + C Q + + RP +EI
Sbjct: 239 --VYELMRACWQWNPSDRPSFAEI 260
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 89 LLGRGGFGPVYRGK-LADGTLV----AVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
+LG G FG VY+G + +G V A+K L + EF+ E ++ S+ H +LVR
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDK-----FLNWSTRFQIILGIARGLQYLH 198
LLG C + +L V + M + L ++ D LNW + IA+G+ YL
Sbjct: 105 LLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLE 157
Query: 199 EDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA-YLSTNFAGTLGYTAPEYA 257
E R+VHRD+ A NVL+ KI DFGLAR D+ Y + + + A E
Sbjct: 158 E---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 258 IRGELSEKADIYSFGVLVLEIIS 280
+ + ++D++S+GV + E+++
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMT 237
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + ++ + I+ ++YL + + +HR
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHR 140
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 243
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 244 EK----VYELMRACWQWNPSDRPSFAEI 267
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 324
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + +N + I+ ++YL + + +HR
Sbjct: 325 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHR 381
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
++ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 382 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 442 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 484
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 485 EK----VYELMRACWQWNPSDRPSFAEI 508
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 89 LLGRGGFGPVYRG-KLADGTLV----AVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
+LG G FG VY+G + +G V A+K L + EF+ E ++ S+ H +LVR
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDK-----FLNWSTRFQIILGIARGLQYLH 198
LLG C + +L V + M + L ++ D LNW + IA+G+ YL
Sbjct: 82 LLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLE 134
Query: 199 EDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA-YLSTNFAGTLGYTAPEYA 257
E R+VHRD+ A NVL+ KI DFGLAR D+ Y + + + A E
Sbjct: 135 E---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 258 IRGELSEKADIYSFGVLVLEIIS 280
+ + ++D++S+GV + E+++
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G + VY+G G VA+K++ +D + S + E+ ++ ++H+N+VRL
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 149 SDGSQRLLVYEYMKN---RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
++ LV+E+M N + +D G + + L + + +GL + HE+ +I
Sbjct: 73 HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KI 129
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGE-LSE 264
+HRD+K N+L++++ Q K+GDFGLAR F S+ TL Y AP+ + S
Sbjct: 130 LHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVLMGSRTYST 188
Query: 265 KADIYSFGVLVLEIISCR 282
DI+S G ++ E+I+ +
Sbjct: 189 SIDIWSCGCILAEMITGK 206
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + ++ + I+ ++YL + + +HR
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHR 135
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 238
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 239 EK----VYELMRACWQWNPSDRPSFAEI 262
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G +VAVKKL +++ +F E+ ++ S+QH N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C +R L+ EY+ SL + +++ ++ Q I +G++YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER-IDHIKLLQYTSQICKGMEYL---GT 135
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRG 260
R +HRD+ N+L++ + + KIGDFGL + P+D+ G + + APE
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ S +D++SFGV++ E+ +
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 19/223 (8%)
Query: 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
G +LG+G FG + + V V K + ++ + FL EV+++ ++H N+++ +G
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
+ + EY+K +L +I ++ WS R IA G+ YLH I+
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQY-PWSQRVSFAKDIASGMAYLHS---MNII 130
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARFF------PEDQAYLST-------NFAGTLGYTA 253
HRD+ + N L+ E + DFGLAR PE L G + A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLT-LPSEMQY 295
PE EK D++SFG+++ EII R N D LP M +
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEIIG-RVNADPDYLPRTMDF 232
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + ++ + I+ ++YL + + +HR
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHR 135
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 238
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 239 EK----VYELMRACWQWNPSDRPSFAEI 262
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 143/282 (50%), Gaps = 38/282 (13%)
Query: 90 LGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGES-------EFLSEVRMITSIQHKNL 141
+G+GGFG V++G+L D ++VA+K L + S +GE+ EF EV +++++ H N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDS-EGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 142 VRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDS 201
V+L G + + +V E++ L + ++ + WS + +++L IA G++Y+ ++
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYM-QNQ 141
Query: 202 HTRIVHRDIKASNVL---LDEKFQ--SKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEY 256
+ IVHRD+++ N+ LDE +K+ DFGL+ + + + G + APE
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVHSVSGLLGNFQWMAPET 197
Query: 257 --AIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314
A +EKAD YSF +++ I++ D EY+ Y + + + ++
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFD-----------EYS---YGKIKFINMIR 243
Query: 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
+ I E ++ NV +C +RP S IV L+
Sbjct: 244 EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + ++ + I+ ++YL + + +HR
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHR 135
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 238
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 239 EK----VYELMRACWQWNPSDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + ++ + I+ ++YL + + +HR
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHR 135
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 238
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 239 EK----VYELMRACWQWNPSDRPSFAEI 262
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G +VAVKKL +++ +F E+ ++ S+QH N+V+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C +R L+ EY+ SL + ++ ++ Q I +G++YL
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL---GT 133
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRG 260
R +HR++ N+L++ + + KIGDFGL + P+D+ Y G + + APE
Sbjct: 134 KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES 193
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ S +D++SFGV++ E+ +
Sbjct: 194 KFSVASDVWSFGVVLYELFT 213
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 22/213 (10%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 140 NLVRLLGCCSD-GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--------- 189
N+V LLG C+ G +++ E+ K +L + + ++F+ + ++ L
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 190 -IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG- 247
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D Y+ A
Sbjct: 152 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 248 TLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
L + APE + ++D++SFGVL+ EI S
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 24/264 (9%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + ++ + I+ ++YL + + +HR
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHR 133
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 269 YSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIVERDA 327
++FGVL+ EI + + + P ++L E+ D RM R EG E+
Sbjct: 194 WAFGVLLWEIATYGMSPYPGID------PSQVYELLEK-------DYRMERPEGCPEK-- 238
Query: 328 LQVINVAFICLQPHGNQRPPMSEI 351
V + C Q + + RP +EI
Sbjct: 239 --VYELMRACWQWNPSDRPSFAEI 260
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 90 LGRGGFGPVYRGKL------ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG V+ + D LVAVK L + S+ +F E ++T +QH+++VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL-KEASESARQDFQREAELLTMLQHQHIVR 78
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLD-----------LLIYGE--SDKFLNWSTRFQIILGI 190
G C++G L+V+EYM++ L+ LL GE + L + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR-FFPEDQAYLSTNFAGTL 249
A G+ YL + VHRD+ N L+ + KIGDFG++R + D + +
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKN 284
+ PE + + + ++D++SFGV++ EI + K
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 230
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 22/213 (10%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 140 NLVRLLGCCSD-GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--------- 189
N+V LLG C+ G +++ E+ K +L + + ++F+ + ++ L
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 190 -IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG- 247
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D Y+ A
Sbjct: 152 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 248 TLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
L + APE + ++D++SFGVL+ EI S
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 90 LGRGGFGPVYRGKL------ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG V+ + D LVAVK L + S+ +F E ++T +QH+++VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL-KEASESARQDFQREAELLTMLQHQHIVR 84
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLD-----------LLIYGE--SDKFLNWSTRFQIILGI 190
G C++G L+V+EYM++ L+ LL GE + L + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR-FFPEDQAYLSTNFAGTL 249
A G+ YL + VHRD+ N L+ + KIGDFG++R + D + +
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKN 284
+ PE + + + ++D++SFGV++ EI + K
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 236
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 127/291 (43%), Gaps = 36/291 (12%)
Query: 90 LGRGGFGPVYRGKLAD------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG+G FG VY G D T VAVK + S + EFL+E ++ ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--------FQIILGIARGLQ 195
LLG S G L+V E M + L + + N R Q+ IA G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 196 YLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YTA 253
YL+ + VHRD+ A N ++ F KIGDFG+ R E AY G L + A
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-TAYYRKGGKGLLPVRWMA 200
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
PE G + +D++SFGV++ EI S + L +E Q L K G L+
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-QVL-----KFVMDGGYLD-- 252
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
+ + ER V ++ +C Q + RP EIV +L + P
Sbjct: 253 ----QPDNCPER----VTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 90 LGRGGFGPVYRGKL------ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG V+ + D LVAVK L + S+ +F E ++T +QH+++VR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKAL-KEASESARQDFQREAELLTMLQHQHIVR 107
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLD-----------LLIYGE--SDKFLNWSTRFQIILGI 190
G C++G L+V+EYM++ L+ LL GE + L + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR-FFPEDQAYLSTNFAGTL 249
A G+ YL + VHRD+ N L+ + KIGDFG++R + D + +
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKN 284
+ PE + + + ++D++SFGV++ EI + K
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 259
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 126/290 (43%), Gaps = 34/290 (11%)
Query: 90 LGRGGFGPVYRGKLAD------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG+G FG VY G D T VAVK + S + EFL+E ++ ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--------FQIILGIARGLQ 195
LLG S G L+V E M + L + + N R Q+ IA G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 196 YLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLSTNFAGTLGYTAP 254
YL+ + VHRD+ A N ++ F KIGDFG+ R E D + + AP
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 255 EYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314
E G + +D++SFGV++ EI S + L +E Q L K G L+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-QVL-----KFVMDGGYLD--- 252
Query: 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
+ + ER V ++ +C Q + N RP EIV +L + P
Sbjct: 253 ---QPDNCPER----VTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFP 295
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G +VAVKKL +++ +F E+ ++ S+QH N+V+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C +R L+ EY+ SL + ++ ++ Q I +G++YL
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL---GT 131
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRG 260
R +HRD+ N+L++ + + KIGDFGL + P+D+ G + + APE
Sbjct: 132 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 191
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ S +D++SFGV++ E+ +
Sbjct: 192 KFSVASDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G +VAVKKL +++ +F E+ ++ S+QH N+V+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C +R L+ EY+ SL + ++ ++ Q I +G++YL
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL---GT 136
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRG 260
R +HRD+ N+L++ + + KIGDFGL + P+D+ G + + APE
Sbjct: 137 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 196
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ S +D++SFGV++ E+ +
Sbjct: 197 KFSVASDVWSFGVVLYELFT 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G +VAVKKL +++ +F E+ ++ S+QH N+V+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C +R L+ EY+ SL + ++ ++ Q I +G++YL
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL---GT 130
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRG 260
R +HRD+ N+L++ + + KIGDFGL + P+D+ G + + APE
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 190
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ S +D++SFGV++ E+ +
Sbjct: 191 KFSVASDVWSFGVVLYELFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G +VAVKKL +++ +F E+ ++ S+QH N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C +R L+ EY+ SL + ++ ++ Q I +G++YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL---GT 132
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRG 260
R +HRD+ N+L++ + + KIGDFGL + P+D+ G + + APE
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ S +D++SFGV++ E+ +
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K + VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWS----------TRFQII 187
HKN++ LLG C+ ++ EY +L + + +S F+ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 188 LG----IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLS 242
+ +ARG++YL + + +HRD+ A NVL+ E KI DFGLAR D +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G +VAVKKL +++ +F E+ ++ S+QH N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C +R L+ EY+ SL + ++ ++ Q I +G++YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL---GT 135
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRG 260
R +HRD+ N+L++ + + KIGDFGL + P+D+ G + + APE
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ S +D++SFGV++ E+ +
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G +VAVKKL +++ +F E+ ++ S+QH N+V+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C +R L+ EY+ SL + ++ ++ Q I +G++YL
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL---GT 138
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRG 260
R +HRD+ N+L++ + + KIGDFGL + P+D+ G + + APE
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 198
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ S +D++SFGV++ E+ +
Sbjct: 199 KFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G +VAVKKL +++ +F E+ ++ S+QH N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C +R L+ EY+ SL + ++ ++ Q I +G++YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL---GT 132
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRG 260
R +HRD+ N+L++ + + KIGDFGL + P+D+ G + + APE
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ S +D++SFGV++ E+ +
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G +VAVKKL +++ +F E+ ++ S+QH N+V+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C +R L+ EY+ SL + ++ ++ Q I +G++YL
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL---GT 137
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRG 260
R +HRD+ N+L++ + + KIGDFGL + P+D+ G + + APE
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 197
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ S +D++SFGV++ E+ +
Sbjct: 198 KFSVASDVWSFGVVLYELFT 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G +VAVKKL +++ +F E+ ++ S+QH N+V+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C +R L+ EY+ SL + ++ ++ Q I +G++YL
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL---GT 163
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRG 260
R +HRD+ N+L++ + + KIGDFGL + P+D+ G + + APE
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 223
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ S +D++SFGV++ E+ +
Sbjct: 224 KFSVASDVWSFGVVLYELFT 243
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 127/268 (47%), Gaps = 32/268 (11%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 285
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ ++ E+M +L + + + ++ + I+ ++YL + + +HR
Sbjct: 286 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHR 342
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
++ A N L+ E K+ DFGL+R D + +TAPE + S K+D+
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 402
Query: 269 YSFGVLVLEI----ISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRM-RKEGIV 323
++FGVL+ EI +S DL+ ++YE +LE D RM R EG
Sbjct: 403 WAFGVLLWEIATYGMSPYPGIDLS-------------QVYE---LLE-KDYRMERPEGCP 445
Query: 324 ERDALQVINVAFICLQPHGNQRPPMSEI 351
E+ V + C Q + + RP +EI
Sbjct: 446 EK----VYELMRACWQWNPSDRPSFAEI 469
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 18/197 (9%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ T VAVK + FL+E ++ ++QH LV+L +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTM--KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDK-----FLNWSTRFQIILGIARGLQYLHEDSHTR 204
++ K LD L E K +++S + IA G+ ++ + ++
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQRNY-- 132
Query: 205 IVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELS 263
+HRD++A+N+L+ KI DFGLAR ED Y + A + +TAPE G +
Sbjct: 133 -IHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 264 EKADIYSFGVLVLEIIS 280
K+D++SFG+L++EI++
Sbjct: 191 IKSDVWSFGILLMEIVT 207
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G +VAVKKL +++ +F E+ ++ S+QH N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C +R L+ EY+ SL + ++ ++ Q I +G++YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL---GT 150
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRG 260
R +HRD+ N+L++ + + KIGDFGL + P+D+ G + + APE
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ S +D++SFGV++ E+ +
Sbjct: 211 KFSVASDVWSFGVVLYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G +VAVKKL +++ +F E+ ++ S+QH N+V+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C +R L+ EY+ SL + ++ ++ Q I +G++YL
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL---GT 139
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRG 260
R +HRD+ N+L++ + + KIGDFGL + P+D+ G + + APE
Sbjct: 140 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 199
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ S +D++SFGV++ E+ +
Sbjct: 200 KFSVASDVWSFGVVLYELFT 219
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 127/291 (43%), Gaps = 36/291 (12%)
Query: 90 LGRGGFGPVYRGKLAD------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG+G FG VY G D T VAVK + S + EFL+E ++ ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--------FQIILGIARGLQ 195
LLG S G L+V E M + L + + N R Q+ IA G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 196 YLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YTA 253
YL+ + VHR++ A N ++ F KIGDFG+ R E Y G L + A
Sbjct: 145 YLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMA 200
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
PE G + +D++SFGV++ EI S + L +E Q L K G L+
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-QVL-----KFVMDGGYLD-- 252
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
+ + ER V ++ +C Q + N RP EIV +L + P
Sbjct: 253 ----QPDNCPER----VTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFP 295
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K + VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK 99
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWS----------TRFQII 187
HKN++ LLG C+ ++ EY +L + + +S F+ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 188 LG----IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ +ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G +VAVKKL +++ +F E+ ++ S+QH N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C +R L+ EY+ SL + ++ ++ Q I +G++YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL---GT 150
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRG 260
R +HRD+ N+L++ + + KIGDFGL + P+D+ G + + APE
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ S +D++SFGV++ E+ +
Sbjct: 211 KFSVASDVWSFGVVLYELFT 230
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 127/291 (43%), Gaps = 36/291 (12%)
Query: 90 LGRGGFGPVYRGKLAD------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG+G FG VY G D T VAVK + S + EFL+E ++ ++VR
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--------FQIILGIARGLQ 195
LLG S G L+V E M + L + + N R Q+ IA G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 196 YLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YTA 253
YL+ + VHR++ A N ++ F KIGDFG+ R E Y G L + A
Sbjct: 146 YLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMA 201
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
PE G + +D++SFGV++ EI S + L +E Q L K G L+
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-QVL-----KFVMDGGYLD-- 253
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
+ + ER V ++ +C Q + N RP EIV +L + P
Sbjct: 254 ----QPDNCPER----VTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFP 296
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K + VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWS----------TRFQII 187
HKN++ LLG C+ ++ EY +L + + +S F+ +
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 188 LG----IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ +ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 142/282 (50%), Gaps = 38/282 (13%)
Query: 90 LGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGES-------EFLSEVRMITSIQHKNL 141
+G+GGFG V++G+L D ++VA+K L + S +GE+ EF EV +++++ H N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDS-EGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 142 VRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDS 201
V+L G + + +V E++ L + ++ + WS + +++L IA G++Y+ ++
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYM-QNQ 141
Query: 202 HTRIVHRDIKASNVL---LDEKFQ--SKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEY 256
+ IVHRD+++ N+ LDE +K+ DFG + + + + G + APE
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQSVHSVSGLLGNFQWMAPET 197
Query: 257 --AIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314
A +EKAD YSF +++ I++ D EY+ Y + + + ++
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFD-----------EYS---YGKIKFINMIR 243
Query: 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
+ I E ++ NV +C +RP S IV L+
Sbjct: 244 EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K + VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWS----------TRFQII 187
HKN++ LLG C+ ++ EY +L + + +S F+ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 188 LG----IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL-S 242
+ +ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 142/282 (50%), Gaps = 38/282 (13%)
Query: 90 LGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGES-------EFLSEVRMITSIQHKNL 141
+G+GGFG V++G+L D ++VA+K L + S +GE+ EF EV +++++ H N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDS-EGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 142 VRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDS 201
V+L G + + +V E++ L + ++ + WS + +++L IA G++Y+ ++
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYM-QNQ 141
Query: 202 HTRIVHRDIKASNVL---LDEKFQ--SKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEY 256
+ IVHRD+++ N+ LDE +K+ DF L+ + + + G + APE
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQSVHSVSGLLGNFQWMAPET 197
Query: 257 --AIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314
A +EKAD YSF +++ I++ D EY+ Y + + + ++
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFD-----------EYS---YGKIKFINMIR 243
Query: 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLT 356
+ I E ++ NV +C +RP S IV L+
Sbjct: 244 EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K + VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 145
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWS----------TRFQII 187
HKN++ LLG C+ ++ EY +L + + +S F+ +
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 188 LG----IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ +ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 206 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 126/291 (43%), Gaps = 36/291 (12%)
Query: 90 LGRGGFGPVYRGKLAD------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG+G FG VY G D T VAVK + S + EFL+E ++ ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--------FQIILGIARGLQ 195
LLG S G L+V E M + L + + N R Q+ IA G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 196 YLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YTA 253
YL+ + VHRD+ A N ++ F KIGDFG+ R E Y G L + A
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG-KGLLPVRWMA 200
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
PE G + +D++SFGV++ EI S + L +E Q L K G L+
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-QVL-----KFVMDGGYLD-- 252
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
+ + ER V ++ +C Q + RP EIV +L + P
Sbjct: 253 ----QPDNCPER----VTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K + VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 138 HKNLVRLLGCCS-DGSQRLLVY--------EYMKNRSLDLLIYGES-----DKFLNWSTR 183
HKN++ LLG C+ DG ++V EY++ R + Y ++ + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K + VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWS----------TRFQII 187
HKN++ LLG C+ ++ EY +L + + +S F+ +
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 188 LG----IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ +ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G +VAVKKL +++ +F E+ ++ S+QH N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C +R L+ E++ SL + ++ ++ Q I +G++YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER-IDHIKLLQYTSQICKGMEYL---GT 135
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRG 260
R +HRD+ N+L++ + + KIGDFGL + P+D+ G + + APE
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ S +D++SFGV++ E+ +
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K + VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGE--------------SDKFLNWSTR 183
HKN++ LLG C+ ++ EY +L + ++ + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLS 242
+ARG++YL + + +HRD+ A NVL+ E KI DFGLAR D +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGE--SEFLSEVRMITSIQHKNLVRLLG 146
+G G FG VY + + + +VA+KK+ Q E + + EVR + ++H N ++ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
C LV EY + DLL + K L + G +GL YLH SH ++
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLH--SHN-MI 176
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAI---RGELS 263
HRD+KA N+LL E K+GDFG A + F GT + APE + G+
Sbjct: 177 HRDVKAGNILLSEPGLVKLGDFGSASIMAP-----ANXFVGTPYWMAPEVILAMDEGQYD 231
Query: 264 EKADIYSFGVLVLEI 278
K D++S G+ +E+
Sbjct: 232 GKVDVWSLGITCIEL 246
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
+G+G FG V G G VAVK + D + Q FL+E ++T ++H NLV+LLG
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 256
Query: 150 DGSQRL-LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ L +V EYM SL + L + L + ++YL ++ VHR
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 313
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL--GYTAPEYAIRGELSEKA 266
D+ A NVL+ E +K+ DFGL + ST G L +TAPE + S K+
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTKS 367
Query: 267 DIYSFGVLVLEIIS 280
D++SFG+L+ EI S
Sbjct: 368 DVWSFGILLWEIYS 381
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGE--SEFLSEVRMITSIQHKNLVRLLG 146
+G G FG VY + + + +VA+KK+ Q E + + EVR + ++H N ++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
C LV EY + DLL + K L + G +GL YLH SH ++
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLH--SHN-MI 137
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAI---RGELS 263
HRD+KA N+LL E K+GDFG A + F GT + APE + G+
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFGSASIMAP-----ANXFVGTPYWMAPEVILAMDEGQYD 192
Query: 264 EKADIYSFGVLVLEI 278
K D++S G+ +E+
Sbjct: 193 GKVDVWSLGITCIEL 207
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 125/291 (42%), Gaps = 36/291 (12%)
Query: 90 LGRGGFGPVYRGKLAD------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG+G FG VY G D T VAVK + S + EFL+E ++ ++VR
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--------FQIILGIARGLQ 195
LLG S G L+V E M + L + + N R Q+ IA G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 196 YLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YTA 253
YL+ + VHRD+ A N ++ F KIGDFG+ R E Y G L + A
Sbjct: 144 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMA 199
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
PE G + +D++SFGV++ EI S + L +E Q L K G L+
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-QVL-----KFVMDGGYLDQP 253
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
D ER V ++ +C Q + RP EIV +L + P
Sbjct: 254 D------NCPER----VTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 294
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K + VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 27 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 86
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWS----------TRFQII 187
HKN++ LLG C+ ++ EY +L + + +S F+ +
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 188 LG----IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ +ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 147 VSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K + VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 138 HKNLVRLLGCCS-DGSQRLLV--------YEYMKNRSLDLLIYGES-----DKFLNWSTR 183
HKN++ LLG C+ DG ++V EY++ R + Y ++ + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K T VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 22 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR-------------- 183
HKN++ LLG C+ ++ EY +L + L +S
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K T VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR-------------- 183
HKN++ LLG C+ ++ EY +L + L +S
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K + VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 32 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 91
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWS----------TRFQII 187
HKN++ LLG C+ ++ EY +L + + +S F+ +
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 188 LG----IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ +ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 152 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
+G+G FG V G G VAVK + D + Q FL+E ++T ++H NLV+LLG
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 69
Query: 150 DGSQRL-LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ L +V EYM SL + L + L + ++YL ++ VHR
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 126
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL--GYTAPEYAIRGELSEKA 266
D+ A NVL+ E +K+ DFGL + ST G L +TAPE + S K+
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTKS 180
Query: 267 DIYSFGVLVLEIIS 280
D++SFG+L+ EI S
Sbjct: 181 DVWSFGILLWEIYS 194
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 6/192 (3%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY G +L VAVK L D + EFL E ++ I+H NLV+LLG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ +V EYM +L + + + + + I+ ++YL + + +HR
Sbjct: 98 TLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN---FIHR 154
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+ A N L+ E K+ DFGL+R D + +TAPE S K+D+
Sbjct: 155 DLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDV 214
Query: 269 YSFGVLVLEIIS 280
++FGVL+ EI +
Sbjct: 215 WAFGVLLWEIAT 226
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 104/197 (52%), Gaps = 16/197 (8%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGES--EFLSEVRMITSIQHKNLVR 143
LG GG VY LA+ T+ VA+K + + ++ E+ F EV + + H+N+V
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
++ + LV EY++ +L Y ES L+ T I G+++ H+
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSE--YIESHGPLSVDTAINFTNQILDGIKHAHD---M 130
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELS 263
RIVHRDIK N+L+D KI DFG+A+ E + + GT+ Y +PE A +GE +
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA-KGEAT 189
Query: 264 EK-ADIYSFGVLVLEII 279
++ DIYS G+++ E++
Sbjct: 190 DECTDIYSIGIVLYEML 206
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K T VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 26 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR-------------- 183
HKN++ LLG C+ ++ EY +L + L +S
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K + VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWS----------TRFQII 187
HKN++ LLG C+ ++ EY +L + + +S F+ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 188 LG----IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ +ARG++YL + + +HRD+ A NVL+ E +I DFGLAR Y +
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K T VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR-------------- 183
HKN++ LLG C+ ++ EY +L + L +S
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLS 242
+ARG++YL + + +HRD+ A NVL+ E KI DFGLAR D +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 97/194 (50%), Gaps = 16/194 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
+G+G FG V G G VAVK + D + Q FL+E ++T ++H NLV+LLG
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 75
Query: 150 DGSQRL-LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ L +V EYM SL + L + L + ++YL ++ VHR
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 132
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL--GYTAPEYAIRGELSEKA 266
D+ A NVL+ E +K+ DFGL + ST G L +TAPE S K+
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREAAFSTKS 186
Query: 267 DIYSFGVLVLEIIS 280
D++SFG+L+ EI S
Sbjct: 187 DVWSFGILLWEIYS 200
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K + VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 29 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 88
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWS----------TRFQII 187
HKN++ LLG C+ ++ EY +L + + +S F+ +
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 188 LG----IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ +ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 149 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K T VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 25 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR-------------- 183
HKN++ LLG C+ ++ EY +L + L +S
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K T VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR-------------- 183
HKN++ LLG C+ ++ EY +L + L +S
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 124/290 (42%), Gaps = 34/290 (11%)
Query: 90 LGRGGFGPVYRGKLAD------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG+G FG VY G D T VAVK + S + EFL+E ++ ++VR
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--------FQIILGIARGLQ 195
LLG S G L+V E M + L + + N R Q+ IA G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 196 YLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLSTNFAGTLGYTAP 254
YL+ + VHRD+ A N ++ F KIGDFG+ R E D + + AP
Sbjct: 142 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 255 EYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314
E G + +D++SFGV++ EI S + L +E Q L K G L+ D
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-QVL-----KFVMDGGYLDQPD 252
Query: 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
ER V ++ +C Q + RP EIV +L + P
Sbjct: 253 ------NCPER----VTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 292
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 18/197 (9%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ T VAVK + FL+E ++ ++QH LV+L +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTM--KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDK-----FLNWSTRFQIILGIARGLQYLHEDSHTR 204
++ K LD L E K +++S + IA G+ ++ + ++
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQRNY-- 305
Query: 205 IVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELS 263
+HRD++A+N+L+ KI DFGLAR ED Y + A + +TAPE G +
Sbjct: 306 -IHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 264 EKADIYSFGVLVLEIIS 280
K+D++SFG+L++EI++
Sbjct: 364 IKSDVWSFGILLMEIVT 380
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
+G+G FG V G G VAVK + D + Q FL+E ++T ++H NLV+LLG
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 84
Query: 150 DGSQRL-LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ L +V EYM SL + L + L + ++YL ++ VHR
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 141
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL--GYTAPEYAIRGELSEKA 266
D+ A NVL+ E +K+ DFGL + ST G L +TAPE + S K+
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTKS 195
Query: 267 DIYSFGVLVLEIIS 280
D++SFG+L+ EI S
Sbjct: 196 DVWSFGILLWEIYS 209
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 125/290 (43%), Gaps = 34/290 (11%)
Query: 90 LGRGGFGPVYRGKLAD------GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG+G FG VY G D T VAVK + S + EFL+E ++ ++VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--------FQIILGIARGLQ 195
LLG S G L+V E M + L + + N R Q+ IA G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 196 YLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLSTNFAGTLGYTAP 254
YL+ + VHRD+ A N ++ F KIGDFG+ R E D + + AP
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 255 EYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314
E G + +D++SFGV++ EI S + L +E Q L K G L+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE-QVL-----KFVMDGGYLD--- 252
Query: 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
+ + ER V ++ +C Q + RP EIV +L + P
Sbjct: 253 ---QPDNCPER----VTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 295
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 108/217 (49%), Gaps = 26/217 (11%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 140 NLVRLLGCCSDGSQRLLVY----------EYMKNRSLDLLIYGES--DKFLNWSTRFQII 187
N+V LLG C+ L+V Y++++ + + Y E+ D + ++ T +I
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 188 ---LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D Y+
Sbjct: 154 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 245 FAG-TLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
A L + APE + ++D++SFGVL+ EI S
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 140 NLVRLLGCCSDGSQRLLVY----------EYMKNRSLDLLIYGESDKFLNWSTRFQII-- 187
N+V LLG C+ L+V Y++++ + + Y D + ++ T +I
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 188 -LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D + A
Sbjct: 154 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 247 G-TLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
L + APE + ++D++SFGVL+ EI S
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 108/218 (49%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K T VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 138 HKNLVRLLGCCS-DGSQRLLV--------YEYMKNRSLDLLIY-----GESDKFLNWSTR 183
HKN++ LLG C+ DG ++V EY++ R L Y ++ L+
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 138 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 113/241 (46%), Gaps = 34/241 (14%)
Query: 82 KNFHPGNLLGRGGFGPVYRGKL------ADGTLVAVKKLCVDKSQQGESEFLSEVRMITS 135
KN G LG G FG V + A T VAVK L + S + LSE ++
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 136 IQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKF---------------LNW 180
+ H ++++L G CS LL+ EY K SL + ES K L+
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR-ESRKVGPGYLGSGGSRNSSSLDH 141
Query: 181 STRFQIILG--------IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232
+ +G I++G+QYL E ++VHRD+ A N+L+ E + KI DFGL+R
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 233 FFPEDQAYLSTNFAGT-LGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPS 291
E+ +Y+ + + + A E + ++D++SFGVL+ EI++ N +P
Sbjct: 199 DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
Query: 292 E 292
E
Sbjct: 259 E 259
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K T VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR-------------- 183
HKN++ LLG C+ ++ EY +L + L +S
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 26/217 (11%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 140 NLVRLLGCCSD-GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII----------- 187
N+V LLG C+ G +++ E+ K +L + + ++F+ + + +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 188 ---LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D Y+
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 245 FAG-TLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
A L + APE + ++D++SFGVL+ EI S
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 108/218 (49%), Gaps = 27/218 (12%)
Query: 87 GNLLGRGGFGPVY--------RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-Q 137
G LG G FG V + K T VAVK L D +++ S+ +SE+ M+ I +
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 138 HKNLVRLLGCCS-DGSQRLLV--------YEYMKNRSLDLLIY-----GESDKFLNWSTR 183
HKN++ LLG C+ DG ++V EY++ R L Y ++ L+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+ARG++YL + + +HRD+ A NVL+ E KI DFGLAR Y +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
TN + + APE + ++D++SFGVL+ EI +
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 90 LGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG VY G+++ VAVK L S+Q E +FL E +I+ + H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLH 198
+G R ++ E M L + + S+ + IA G QYL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 199 EDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAP 254
E+ +HRDI A N LL +KIGDFG+AR Y A + + P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 255 EYAIRGELSEKADIYSFGVLVLEIIS 280
E + G + K D +SFGVL+ EI S
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 26/217 (11%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 140 NLVRLLGCCSD-GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII----------- 187
N+V LLG C+ G +++ E+ K +L + + ++F+ + + +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 188 ---LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D Y+
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 245 FAG-TLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
A L + APE + ++D++SFGVL+ EI S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 83 NFHPGNLLGRGGFGPVYRGKL-----ADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSI 136
N G LG G FG V D L VAVK L + +SE+++++ +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 137 -QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR-------FQIIL 188
QH+N+V LLG C+ G L++ EY YG+ FL +R F I
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEY--------CCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 189 GIARGLQYLHEDSHT----------RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238
A LH S +HRD+ A NVLL +KIGDFGLAR D
Sbjct: 159 STASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 239 AYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKN 284
Y+ N + + APE + ++D++S+G+L+ EI S N
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 265
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 119/263 (45%), Gaps = 40/263 (15%)
Query: 82 KNFHPGNLLGRGGFGPVYRGKL------ADGTLVAVKKLCVDKSQQGESEFLSEVRMITS 135
KN G LG G FG V + A T VAVK L + S + LSE ++
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 136 IQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKF---------------LNW 180
+ H ++++L G CS LL+ EY K SL + ES K L+
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR-ESRKVGPGYLGSGGSRNSSSLDH 141
Query: 181 STRFQIILG--------IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232
+ +G I++G+QYL E ++VHRD+ A N+L+ E + KI DFGL+R
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 233 -FFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPS 291
+ ED + + + A E + ++D++SFGVL+ EI++ N +P
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP- 257
Query: 292 EMQYLPEYAWKLYERGRILELVD 314
PE + L + G +E D
Sbjct: 258 -----PERLFNLLKTGHRMERPD 275
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 107/192 (55%), Gaps = 12/192 (6%)
Query: 90 LGRGGFGPVYRGKLADGT--LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G+G FG V++G + + T +VA+K + +++++ + E+ +++ + + G
Sbjct: 31 IGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGS 89
Query: 148 CSDGSQRLLVYEYMKNRS-LDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
GS+ ++ EY+ S LDLL G D+F +T + IL +GL YLH + + +
Sbjct: 90 YLKGSKLWIIMEYLGGGSALDLLRAGPFDEF-QIATMLKEIL---KGLDYLHSE---KKI 142
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKA 266
HRDIKA+NVLL E+ K+ DFG+A + Q +T F GT + APE + KA
Sbjct: 143 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIQQSAYDSKA 201
Query: 267 DIYSFGVLVLEI 278
DI+S G+ +E+
Sbjct: 202 DIWSLGITAIEL 213
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 26/217 (11%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 128
Query: 140 NLVRLLGCCSD-GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII----------- 187
N+V LLG C+ G +++ E+ K +L + + ++F+ + + +
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 188 ---LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D Y+
Sbjct: 189 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 245 FAG-TLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
A L + APE + ++D++SFGVL+ EI S
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 90 LGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG VY G+++ VAVK L S+Q E +FL E +I+ + H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLH 198
+G R ++ E M L + + S+ + IA G QYL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 199 EDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAP 254
E+ +HRDI A N LL +KIGDFG+AR Y A + + P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 255 EYAIRGELSEKADIYSFGVLVLEIIS 280
E + G + K D +SFGVL+ EI S
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 90 LGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG VY G+++ VAVK L S+Q E +FL E +I+ H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLH 198
+G R ++ E M L + + S+ + IA G QYL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 199 EDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAP 254
E+ +HRDI A N LL +KIGDFG+AR Y A + + P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 255 EYAIRGELSEKADIYSFGVLVLEIIS 280
E + G + K D +SFGVL+ EI S
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 40/263 (15%)
Query: 82 KNFHPGNLLGRGGFGPVYRGKL------ADGTLVAVKKLCVDKSQQGESEFLSEVRMITS 135
KN G LG G FG V + A T VAVK L + S + LSE ++
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 136 IQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKF---------------LNW 180
+ H ++++L G CS LL+ EY K SL + ES K L+
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR-ESRKVGPGYLGSGGSRNSSSLDH 141
Query: 181 STRFQIILG--------IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232
+ +G I++G+QYL E S +VHRD+ A N+L+ E + KI DFGL+R
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 233 -FFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPS 291
+ ED + + + A E + ++D++SFGVL+ EI++ N +P
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP- 257
Query: 292 EMQYLPEYAWKLYERGRILELVD 314
PE + L + G +E D
Sbjct: 258 -----PERLFNLLKTGHRMERPD 275
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 105/216 (48%), Gaps = 25/216 (11%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 33 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 92
Query: 140 NLVRLLGCCSD-GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII----------- 187
N+V LLG C+ G +++ E+ K +L + + ++F+ + T +
Sbjct: 93 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC 152
Query: 188 --LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D +
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 246 AG-TLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
A L + APE + ++D++SFGVL+ EI S
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 26/217 (11%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 140 NLVRLLGCCSD-GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII----------- 187
N+V LLG C+ G +++ E+ K +L + + ++F+ + + +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 188 ---LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D Y+
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 245 FAG-TLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
A L + APE + ++D++SFGVL+ EI S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 62 FNGNLRTISYFDFQTLKKATKNFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLC 115
F G +IS D + + + KN LG G FG VY G+++ VAVK L
Sbjct: 41 FAGKTSSIS--DLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 96
Query: 116 VDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESD 175
S+Q E +FL E +I+ H+N+VR +G R ++ E M L +
Sbjct: 97 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 156
Query: 176 KFLNWST-----RFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD---EKFQSKIGD 227
+ S+ + IA G QYL E+ +HRDI A N LL +KIGD
Sbjct: 157 RPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD 213
Query: 228 FGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
FG+AR Y A + + PE + G + K D +SFGVL+ EI S
Sbjct: 214 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 133/292 (45%), Gaps = 42/292 (14%)
Query: 90 LGRGGFGPVYRGKLADG-------TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
LG+G FG VY G +A G T VA+K + S + EFL+E ++ ++V
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYG-----ESDKFL---NWSTRFQIILGIARGL 194
RLLG S G L++ E M L + E++ L + S Q+ IA G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YT 252
YL+ + + VHRD+ A N ++ E F KIGDFG+ R E Y G L +
Sbjct: 152 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWM 207
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312
+PE G + +D++SFGV++ EI + + L +E Q L + G +L+
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVL-----RFVMEGGLLDK 261
Query: 313 VD--PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESG 362
D P M + + +C Q + RP EI++ + ++E G
Sbjct: 262 PDNCPDM------------LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 90 LGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG VY G+++ VAVK L S+Q E +FL E +I+ H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLH 198
+G R ++ E M L + + S+ + IA G QYL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 199 EDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAP 254
E+ +HRDI A N LL +KIGDFG+AR Y A + + P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 255 EYAIRGELSEKADIYSFGVLVLEIIS 280
E + G + K D +SFGVL+ EI S
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 133/292 (45%), Gaps = 42/292 (14%)
Query: 90 LGRGGFGPVYRGKLADG-------TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
LG+G FG VY G +A G T VA+K + S + EFL+E ++ ++V
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYG-----ESDKFL---NWSTRFQIILGIARGL 194
RLLG S G L++ E M L + E++ L + S Q+ IA G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YT 252
YL+ + + VHRD+ A N ++ E F KIGDFG+ R E Y G L +
Sbjct: 145 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWM 200
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312
+PE G + +D++SFGV++ EI + + L +E Q L + G +L+
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVL-----RFVMEGGLLDK 254
Query: 313 VD--PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESG 362
D P M + + +C Q + RP EI++ + ++E G
Sbjct: 255 PDNCPDM------------LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 294
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 62 FNGNLRTISYFDFQTLKKATKNFHPGNLLGRGGFGPVYRGKLA------DGTLVAVKKLC 115
F G +IS D + + + KN LG G FG VY G+++ VAVK L
Sbjct: 31 FAGKTSSIS--DLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 86
Query: 116 VDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESD 175
S+Q E +FL E +I+ H+N+VR +G R ++ E M L +
Sbjct: 87 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 146
Query: 176 KFLNWST-----RFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLL---DEKFQSKIGD 227
+ S+ + IA G QYL E+ +HRDI A N LL +KIGD
Sbjct: 147 RPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD 203
Query: 228 FGLARFFPEDQAYLSTNFAG-TLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
FG+AR Y A + + PE + G + K D +SFGVL+ EI S
Sbjct: 204 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 90 LGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG VY G+++ VAVK L S+Q E +FL E +I+ H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLH 198
+G R ++ E M L + + S+ + IA G QYL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 199 EDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAP 254
E+ +HRDI A N LL +KIGDFG+AR Y A + + P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 255 EYAIRGELSEKADIYSFGVLVLEIIS 280
E + G + K D +SFGVL+ EI S
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 90 LGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG VY G+++ VAVK L S+Q E +FL E +I+ H+N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLH 198
+G R ++ E M L + + S+ + IA G QYL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 199 EDSHTRIVHRDIKASNVLLD---EKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAP 254
E+ +HRDI A N LL +KIGDFG+AR Y A + + P
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 255 EYAIRGELSEKADIYSFGVLVLEIIS 280
E + G + K D +SFGVL+ EI S
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 133/292 (45%), Gaps = 42/292 (14%)
Query: 90 LGRGGFGPVYRGKLADG-------TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
LG+G FG VY G +A G T VA+K + S + EFL+E ++ ++V
Sbjct: 24 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYG-----ESDKFL---NWSTRFQIILGIARGL 194
RLLG S G L++ E M L + E++ L + S Q+ IA G+
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YT 252
YL+ + + VHRD+ A N ++ E F KIGDFG+ R E Y G L +
Sbjct: 143 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWM 198
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312
+PE G + +D++SFGV++ EI + + L +E Q L + G +L+
Sbjct: 199 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVL-----RFVMEGGLLDK 252
Query: 313 VD--PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESG 362
D P M + + +C Q + RP EI++ + ++E G
Sbjct: 253 PDNCPDM------------LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 292
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 133/292 (45%), Gaps = 42/292 (14%)
Query: 90 LGRGGFGPVYRGKLADG-------TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
LG+G FG VY G +A G T VA+K + S + EFL+E ++ ++V
Sbjct: 26 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYG-----ESDKFL---NWSTRFQIILGIARGL 194
RLLG S G L++ E M L + E++ L + S Q+ IA G+
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YT 252
YL+ + + VHRD+ A N ++ E F KIGDFG+ R E Y G L +
Sbjct: 145 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWM 200
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312
+PE G + +D++SFGV++ EI + + L +E Q L + G +L+
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVL-----RFVMEGGLLDK 254
Query: 313 VD--PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESG 362
D P M + + +C Q + RP EI++ + ++E G
Sbjct: 255 PDNCPDM------------LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 294
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 90 LGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG VY G+++ VAVK L S+Q E +FL E +I+ H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLH 198
+G R ++ E M L + + S+ + IA G QYL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 199 EDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAP 254
E+ +HRDI A N LL +KIGDFG+AR Y A + + P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 255 EYAIRGELSEKADIYSFGVLVLEIIS 280
E + G + K D +SFGVL+ EI S
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 90 LGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG VY G+++ VAVK L S+Q E +FL E +I+ H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLH 198
+G R ++ E M L + + S+ + IA G QYL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 199 EDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAP 254
E+ +HRDI A N LL +KIGDFG+AR Y A + + P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 255 EYAIRGELSEKADIYSFGVLVLEIIS 280
E + G + K D +SFGVL+ EI S
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 133/292 (45%), Gaps = 42/292 (14%)
Query: 90 LGRGGFGPVYRGKLADG-------TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
LG+G FG VY G +A G T VA+K + S + EFL+E ++ ++V
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYG-----ESDKFL---NWSTRFQIILGIARGL 194
RLLG S G L++ E M L + E++ L + S Q+ IA G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YT 252
YL+ + + VHRD+ A N ++ E F KIGDFG+ R E Y G L +
Sbjct: 146 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWM 201
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312
+PE G + +D++SFGV++ EI + + L +E Q L + G +L+
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVL-----RFVMEGGLLDK 255
Query: 313 VD--PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESG 362
D P M + + +C Q + RP EI++ + ++E G
Sbjct: 256 PDNCPDM------------LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 295
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 133/292 (45%), Gaps = 42/292 (14%)
Query: 90 LGRGGFGPVYRGKLADG-------TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
LG+G FG VY G +A G T VA+K + S + EFL+E ++ ++V
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYG-----ESDKFL---NWSTRFQIILGIARGL 194
RLLG S G L++ E M L + E++ L + S Q+ IA G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YT 252
YL+ + + VHRD+ A N ++ E F KIGDFG+ R E Y G L +
Sbjct: 139 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWM 194
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312
+PE G + +D++SFGV++ EI + + L +E Q L + G +L+
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVL-----RFVMEGGLLDK 248
Query: 313 VD--PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESG 362
D P M + + +C Q + RP EI++ + ++E G
Sbjct: 249 PDNCPDM------------LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 288
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 129/292 (44%), Gaps = 42/292 (14%)
Query: 90 LGRGGFGPVYRGKLADG-------TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
LG+G FG VY G +A G T VA+K + S + EFL+E ++ ++V
Sbjct: 23 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLN--------WSTRFQIILGIARGL 194
RLLG S G L++ E M L + N S Q+ IA G+
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YT 252
YL+ + + VHRD+ A N ++ E F KIGDFG+ R E Y G L +
Sbjct: 142 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWM 197
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312
+PE G + +D++SFGV++ EI + + L +E Q L + G +L+
Sbjct: 198 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVL-----RFVMEGGLLDK 251
Query: 313 VD--PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESG 362
D P M + + +C Q + RP EI++ + ++E G
Sbjct: 252 PDNCPDM------------LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 291
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 90 LGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG VY G+++ VAVK L S+Q E +FL E +I+ H+N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLH 198
+G R ++ E M L + + S+ + IA G QYL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 199 EDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAP 254
E+ +HRDI A N LL +KIGDFG+AR Y A + + P
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 255 EYAIRGELSEKADIYSFGVLVLEIIS 280
E + G + K D +SFGVL+ EI S
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 101/218 (46%), Gaps = 19/218 (8%)
Query: 83 NFHPGNLLGRGGFGPVYRGKL-----ADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSI 136
N G LG G FG V D L VAVK L + +SE+++++ +
Sbjct: 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 98
Query: 137 -QHKNLVRLLGCCSDGSQRLLVYEY--------MKNRSLDLLIYGESDKFLNWSTRFQII 187
QH+N+V LLG C+ G L++ EY R + + E + L
Sbjct: 99 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 158
Query: 188 LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL-STNFA 246
+A+G+ +L + +HRD+ A NVLL +KIGDFGLAR D Y+ N
Sbjct: 159 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 215
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKN 284
+ + APE + ++D++S+G+L+ EI S N
Sbjct: 216 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 253
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 129/292 (44%), Gaps = 42/292 (14%)
Query: 90 LGRGGFGPVYRGKLADG-------TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
LG+G FG VY G +A G T VA+K + S + EFL+E ++ ++V
Sbjct: 33 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLN--------WSTRFQIILGIARGL 194
RLLG S G L++ E M L + N S Q+ IA G+
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YT 252
YL+ + + VHRD+ A N ++ E F KIGDFG+ R E Y G L +
Sbjct: 152 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWM 207
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312
+PE G + +D++SFGV++ EI + + L +E Q L + G +L+
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVL-----RFVMEGGLLDK 261
Query: 313 VD--PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESG 362
D P M + + +C Q + RP EI++ + ++E G
Sbjct: 262 PDNCPDM------------LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 101/218 (46%), Gaps = 19/218 (8%)
Query: 83 NFHPGNLLGRGGFGPVYR------GKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI 136
N G LG G FG V GK VAVK L + +SE+++++ +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 137 -QHKNLVRLLGCCSDGSQRLLVYEY--------MKNRSLDLLIYGESDKFLNWSTRFQII 187
QH+N+V LLG C+ G L++ EY R + + E + L
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 166
Query: 188 LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL-STNFA 246
+A+G+ +L + +HRD+ A NVLL +KIGDFGLAR D Y+ N
Sbjct: 167 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 223
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKN 284
+ + APE + ++D++S+G+L+ EI S N
Sbjct: 224 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 261
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 18/209 (8%)
Query: 87 GNLLGRGGFGPVYRGKLA--DGTL--VAVKKLCVDKSQQGE-SEFLSEVRMITSIQHKNL 141
G +LG G FG V G L DGT VAVK + +D S Q E EFLSE + H N+
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 142 VRLLGCCSDGSQR-----LLVYEYMKNRSLD-LLIYGESD---KFLNWSTRFQIILGIAR 192
+RLLG C + S + +++ +MK L L+Y + K + T + ++ IA
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT-LGY 251
G++YL S+ +HRD+ A N +L + + DFGL++ Y A + +
Sbjct: 159 GMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 252 TAPEYAIRGELSEKADIYSFGVLVLEIIS 280
A E + K+D+++FGV + EI +
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 23/222 (10%)
Query: 83 NFHPGNLLGRGGFGPVYRGKL-----ADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSI 136
N G LG G FG V D L VAVK L + +SE+++++ +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 137 -QHKNLVRLLGCCSDGSQRLLVYEYM-----------KNRSLDL-LIYGESDKFLNWSTR 183
QH+N+V LLG C+ G L++ EY K+R L+ + ++ L+
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDL 166
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL-S 242
+A+G+ +L + +HRD+ A NVLL +KIGDFGLAR D Y+
Sbjct: 167 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKN 284
N + + APE + ++D++S+G+L+ EI S N
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 265
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 133/292 (45%), Gaps = 42/292 (14%)
Query: 90 LGRGGFGPVYRGKLADG-------TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
LG+G FG VY G +A G T VA+K + S + EFL+E ++ ++V
Sbjct: 55 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYG-----ESDKFL---NWSTRFQIILGIARGL 194
RLLG S G L++ E M L + E++ L + S Q+ IA G+
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YT 252
YL+ + + VHRD+ A N ++ E F KIGDFG+ R E Y G L +
Sbjct: 174 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWM 229
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312
+PE G + +D++SFGV++ EI + + L +E Q L + G +L+
Sbjct: 230 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVL-----RFVMEGGLLDK 283
Query: 313 VD--PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESG 362
D P M + + +C Q + RP EI++ + ++E G
Sbjct: 284 PDNCPDM------------LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 323
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 90 LGRGGFGPV---YRGKLADGT--LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG G FG V DGT +VAVK L D Q S + E+ ++ ++ H+++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
GCC D ++ LV EY+ SL + S + + I G+ YLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHSQHY 138
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG--TLGYTAPEYAIRG 260
+HR++ A NVLLD KIGDFGLA+ PE Y G + + APE
Sbjct: 139 ---IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ +D++SFGV + E+++
Sbjct: 196 KFYYASDVWSFGVTLYELLT 215
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 133/291 (45%), Gaps = 40/291 (13%)
Query: 90 LGRGGFGPVYRGKLADG-------TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
LG+G FG VY G +A G T VA+K + S + EFL+E ++ ++V
Sbjct: 18 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYG-----ESDKFL---NWSTRFQIILGIARGL 194
RLLG S G L++ E M L + E++ L + S Q+ IA G+
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLSTNFAGTLGYTA 253
YL+ + + VHRD+ A N ++ E F KIGDFG+ R E D + + +
Sbjct: 137 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
PE G + +D++SFGV++ EI + + L +E Q L + G +L+
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVL-----RFVMEGGLLDKP 247
Query: 314 D--PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESG 362
D P M ++ + +C Q + RP EI++ + ++E G
Sbjct: 248 DNCPDM------------LLELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 286
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 90 LGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG VY G+++ VAVK L S+Q E +FL E +I+ H+N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLH 198
+G R ++ E M L + + S+ + IA G QYL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 199 EDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAP 254
E+ +HRDI A N LL +KIGDFG+AR Y A + + P
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 255 EYAIRGELSEKADIYSFGVLVLEIIS 280
E + G + K D +SFGVL+ EI S
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 90 LGRGGFGPV---YRGKLADGT--LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG G FG V DGT +VAVK L D Q S + E+ ++ ++ H+++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 145 LGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
GCC D ++ LV EY+ SL + S + + I G+ YLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQHY 138
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG--TLGYTAPEYAIRG 260
+HR++ A NVLLD KIGDFGLA+ PE Y G + + APE
Sbjct: 139 ---IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ +D++SFGV + E+++
Sbjct: 196 KFYYASDVWSFGVTLYELLT 215
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 90 LGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG VY G+++ VAVK L S+Q E +FL E +I+ H+N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLH 198
+G R ++ E M L + + S+ + IA G QYL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 199 EDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAP 254
E+ +HRDI A N LL +KIGDFG+AR Y A + + P
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 255 EYAIRGELSEKADIYSFGVLVLEIIS 280
E + G + K D +SFGVL+ EI S
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 133/292 (45%), Gaps = 42/292 (14%)
Query: 90 LGRGGFGPVYRGKLADG-------TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
LG+G FG VY G +A G T VA+K + S + EFL+E ++ ++V
Sbjct: 20 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYG-----ESDKFL---NWSTRFQIILGIARGL 194
RLLG S G L++ E M L + E++ L + S Q+ IA G+
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG--YT 252
YL+ + + VHRD+ A N + E F KIGDFG+ R E Y G L +
Sbjct: 139 AYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWM 194
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILEL 312
+PE G + +D++SFGV++ EI + + L +E Q L + G +L+
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVL-----RFVMEGGLLDK 248
Query: 313 VD--PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESG 362
D P M ++ + +C Q + RP EI++ + ++E G
Sbjct: 249 PDNCPDM------------LLELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 288
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 11/200 (5%)
Query: 90 LGRGGFGPVYR-GKLADGTLVAVKKLCVDKSQQGESEFL-SEVRMITSIQHKNLVRLLGC 147
+G G +G + + +DG ++ K+L + E + L SEV ++ ++H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 148 CSDGSQRLL--VYEYMKNRSLDLLIY--GESDKFLNWSTRFQIILGIARGLQYLHEDS-- 201
D + L V EY + L +I + ++L+ +++ + L+ H S
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 202 -HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
HT ++HRD+K +NV LD K K+GDFGLAR D ++ T F GT Y +PE R
Sbjct: 134 GHT-VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT-FVGTPYYMSPEQMNRM 191
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+EK+DI+S G L+ E+ +
Sbjct: 192 SYNEKSDIWSLGCLLYELCA 211
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 132/291 (45%), Gaps = 40/291 (13%)
Query: 90 LGRGGFGPVYRGKLADG-------TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
LG+G FG VY G +A G T VA+K + S + EFL+E ++ ++V
Sbjct: 27 LGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYG-----ESDKFL---NWSTRFQIILGIARGL 194
RLLG S G L++ E M L + E++ L + S Q+ IA G+
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLSTNFAGTLGYTA 253
YL+ + + VHRD+ A N ++ E F KIGDFG+ R E D + + +
Sbjct: 146 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 202
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
PE G + +D++SFGV++ EI + + L +E Q L + G +L+
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVL-----RFVMEGGLLDKP 256
Query: 314 D--PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESG 362
D P M + + +C Q + RP EI++ + ++E G
Sbjct: 257 DNCPDM------------LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 295
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 129/291 (44%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 122
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T+ GTL Y P
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPP 176
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 177 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 225
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 226 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 50/229 (21%)
Query: 90 LGRGGFGPVYRGKLADG-------TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
+G G FG V++ + A G T+VAVK L + S +++F E ++ + N+V
Sbjct: 55 IGEGAFGRVFQAR-APGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIV 113
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFL--------------NWSTRFQII- 187
+LLG C+ G L++EYM YG+ ++FL + STR ++
Sbjct: 114 KLLGVCAVGKPMCLLFEYMA--------YGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 188 -----------LGIAR----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232
L IAR G+ YL E + VHRD+ N L+ E KI DFGL+R
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSR 222
Query: 233 -FFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ D N A + + PE + ++D++++GV++ EI S
Sbjct: 223 NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 128/295 (43%), Gaps = 43/295 (14%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ------IILGI 190
+H N++RL G D ++ L+ EY GE K L ++F I +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPR--------GEVYKELQKLSKFDEQRTATYITEL 122
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
A L Y H R++HRDIK N+LL + KI DFG + P + T GTL
Sbjct: 123 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLD 176
Query: 251 YTAPEYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRI 309
Y PE I G + EK D++S GVL E + + P E E Y+R
Sbjct: 177 YLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISR 225
Query: 310 LELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
+E P EG RD + + L+ + +QRP + E++ S P
Sbjct: 226 VEFTFPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 129/291 (44%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 122
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T +GTL Y P
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---RTTLSGTLDYLPP 176
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 177 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 225
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 226 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 129/291 (44%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 126
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T+ GTL Y P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPP 180
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 181 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 229
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 230 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 129/291 (44%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 121
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T+ GTL Y P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPP 175
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 176 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 224
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 225 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 129/291 (44%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 121
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T+ GTL Y P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPP 175
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 176 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 224
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 225 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T GTL Y P
Sbjct: 139 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPP 192
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 193 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 241
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 242 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 284
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 147
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T GTL Y P
Sbjct: 148 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPP 201
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEII 279
E I G + EK D++S GVL E +
Sbjct: 202 E-MIEGRMHDEKVDLWSLGVLCYEFL 226
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 26/217 (11%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 140 NLVRLLGCCSD-GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII----------- 187
N+V LLG C+ G +++ E+ K +L + + ++F+ + + +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 188 ---LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D +
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 245 FAG-TLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
A L + APE + ++D++SFGVL+ EI S
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 19/202 (9%)
Query: 89 LLGRGGFGPVYRGK-LADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
+LG G FG VY+G + DG VA+K L + S + E L E ++ + + R
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGE----SDKFLNWSTRFQIILGIARGLQYLHE 199
LLG C + +L+ LD + S LNW + IA+G+ YL +
Sbjct: 84 LLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYLED 137
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQA-YLSTNFAGTLGYTAPEYAI 258
R+VHRD+ A NVL+ KI DFGLAR D+ Y + + + A E +
Sbjct: 138 ---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 194
Query: 259 RGELSEKADIYSFGVLVLEIIS 280
R + ++D++S+GV V E+++
Sbjct: 195 RRRFTHQSDVWSYGVTVWELMT 216
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 124
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T GTL Y P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPP 178
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 179 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 227
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 228 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 90 LGRGGFGPVYRGKLA------DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG VY G+++ VAVK L S+Q E +FL E +I+ H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLH 198
+G R ++ E M L + + S+ + IA G QYL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 199 EDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAYLSTNFAG-TLGYTAP 254
E+ +HRDI A N LL +KIGDFG+A+ Y A + + P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 255 EYAIRGELSEKADIYSFGVLVLEIIS 280
E + G + K D +SFGVL+ EI S
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 29/234 (12%)
Query: 61 FFNGNLRTISYFDFQTLKKATKNFHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLC 115
+F G+ + + LK+ F +LG G FG VY+G + +G VA+K+L
Sbjct: 21 YFQGSGEAPNQALLRILKET--EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 78
Query: 116 VDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLL--------VYEYMKNRSLD 167
S + E L E ++ S+ + ++ RLLG C + +L+ + +Y++ +
Sbjct: 79 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN 138
Query: 168 LLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGD 227
+ S LNW + IA+G+ YL + R+VHRD+ A NVL+ KI D
Sbjct: 139 I----GSQYLLNWCVQ------IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITD 185
Query: 228 FGLARFF-PEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
FGLA+ E++ Y + + + A E + + ++D++S+GV V E+++
Sbjct: 186 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 139 KNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L+ + +Y++ ++ S LNW + I
Sbjct: 87 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 136
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 137 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 193
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 194 KWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 24/210 (11%)
Query: 85 HPGNLLGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
H ++G+G FG VY G+ D A+K L Q FL E ++ + H N
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83
Query: 141 LVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII-------LGIARG 193
++ L+G +L E + + L + +G+ +F+ R + L +ARG
Sbjct: 84 VLALIGI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARG 136
Query: 194 LQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT---LG 250
++YL E + VHRD+ A N +LDE F K+ DFGLAR + + Y +
Sbjct: 137 MEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK 193
Query: 251 YTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+TA E + K+D++SFGVL+ E+++
Sbjct: 194 WTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
G +G G FG VY+GK V + + QQ ++ F +EV ++ +H N++ +G
Sbjct: 17 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMG 75
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
S Q +V ++ + SL ++ KF I ARG+ YLH S I+
Sbjct: 76 Y-STKPQLAIVTQWCEGSSLYHHLHASETKF-EMKKLIDIARQTARGMDYLHAKS---II 130
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLSTNFAGTLGYTAPEYAIRGELSE- 264
HRD+K++N+ L E KIGDFGLA ++ +G++ + APE IR + S
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDSNP 189
Query: 265 ---KADIYSFGVLVLEIIS 280
++D+Y+FG+++ E+++
Sbjct: 190 YSFQSDVYAFGIVLYELMT 208
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 26/217 (11%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 140 NLVRLLGCCSD-GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII----------- 187
N+V LLG C+ G +++ E+ K +L + + ++F+ + + +
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 188 ---LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D +
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 245 FAG-TLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
A L + APE + ++D++SFGVL+ EI S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 121
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T GTL Y P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPP 175
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 176 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 224
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 225 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 139 KNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L+ + +Y++ ++ S LNW + I
Sbjct: 71 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 120
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 121 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 177
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 90 LGRGGFGPVY---RGKLADGT--LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG G FG V DGT +VAVK L D Q S + E+ ++ ++ H+++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 145 LGCCSD-GSQRL-LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
GCC D G+ L LV EY+ SL + S + + I G+ YLH +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQHY 155
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG--TLGYTAPEYAIRG 260
+HRD+ A NVLLD KIGDFGLA+ PE G + + APE
Sbjct: 156 ---IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEY 212
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ +D++SFGV + E+++
Sbjct: 213 KFYYASDVWSFGVTLYELLT 232
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 18/202 (8%)
Query: 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
G +G G FG VY+GK V + + QQ ++ F +EV ++ +H N++ +G
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMG 87
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
S Q +V ++ + SL ++ KF I ARG+ YLH S I+
Sbjct: 88 Y-STAPQLAIVTQWCEGSSLYHHLHASETKF-EMKKLIDIARQTARGMDYLHAKS---II 142
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN----FAGTLGYTAPEYAIRGEL 262
HRD+K++N+ L E KIGDFGLA E + ++ +G++ + APE IR +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLA---TEKSRWSGSHQFEQLSGSILWMAPE-VIRMQD 198
Query: 263 SE----KADIYSFGVLVLEIIS 280
S ++D+Y+FG+++ E+++
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMT 220
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 126
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T GTL Y P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPP 180
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 181 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 229
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 230 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 120
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T GTL Y P
Sbjct: 121 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPP 174
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 175 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 223
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 224 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 266
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 26/217 (11%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 140 NLVRLLGCCSD-GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII----------- 187
N+V LLG C+ G +++ E+ K +L + + ++F+ + + +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 188 ---LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D +
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 245 FAG-TLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
A L + APE + ++D++SFGVL+ EI S
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 139 KNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L+ + +Y++ ++ S LNW + I
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 126
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 127 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 139 KNLVRLLGCCSDGSQRLLV--------YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L++ +Y++ ++ S LNW + I
Sbjct: 78 PHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNI----GSQYLLNWCVQ------I 127
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 128 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 125/290 (43%), Gaps = 33/290 (11%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 126
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T GTL Y P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPP 180
Query: 255 EYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314
E EK D++S GVL E + + P E E Y+R +E
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFTF 230
Query: 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 231 PDFVTEGA--RDLISRL------LKHNPSQRPXLREVLEHPWITANSSKP 272
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 139 KNLVRLLGCCSDGSQRLLV--------YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L++ +Y++ ++ S LNW + I
Sbjct: 77 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 126
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 127 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 139 KNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L+ + +Y++ ++ S LNW + I
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNI----GSQYLLNWCVQ------I 126
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 127 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 139 KNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L+ + +Y++ ++ S LNW + I
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 126
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 127 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 139 KNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L+ + +Y++ ++ S LNW + I
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 129
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 130 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 139 KNLVRLLGCCSDGSQRLLV--------YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L++ +Y++ ++ S LNW + I
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 128
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 129 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 139 KNLVRLLGCCSDGSQRLLV--------YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L++ +Y++ ++ S LNW + I
Sbjct: 78 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 127
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 128 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 125
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T GTL Y P
Sbjct: 126 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPP 179
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 180 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 228
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 229 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 271
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 139 KNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L+ + +Y++ ++ S LNW + I
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 129
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 130 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 139 KNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L+ + +Y++ ++ S LNW + I
Sbjct: 83 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 132
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 133 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 189
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 190 KWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 139 KNLVRLLGCCSDGSQRLLV--------YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L++ +Y++ ++ S LNW + I
Sbjct: 81 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 130
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 131 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 187
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 121
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T GTL Y P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGTLDYLPP 175
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 176 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 224
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 225 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 139 KNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L+ + +Y++ ++ S LNW + I
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 128
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 129 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 139 KNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L+ + +Y++ ++ S LNW + I
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 129
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 130 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 11/200 (5%)
Query: 90 LGRGGFGPVYR-GKLADGTLVAVKKLCVDKSQQGESEFL-SEVRMITSIQHKNLVRLLGC 147
+G G +G + + +DG ++ K+L + E + L SEV ++ ++H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 148 CSDGSQRLL--VYEYMKNRSLDLLIY--GESDKFLNWSTRFQIILGIARGLQYLHEDS-- 201
D + L V EY + L +I + ++L+ +++ + L+ H S
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 202 -HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
HT ++HRD+K +NV LD K K+GDFGLAR D+ + + F GT Y +PE R
Sbjct: 134 GHT-VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF-AKEFVGTPYYMSPEQMNRM 191
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+EK+DI+S G L+ E+ +
Sbjct: 192 SYNEKSDIWSLGCLLYELCA 211
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 139 KNLVRLLGCCSDGSQRLLV--------YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L++ +Y++ ++ S LNW + I
Sbjct: 80 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 129
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 130 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 132/308 (42%), Gaps = 49/308 (15%)
Query: 82 KNFHPGNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESE-FLSEVRMIT 134
+N G +LG G FG V K VAVK L +K+ E E +SE++M+T
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML-KEKADSSEREALMSELKMMT 103
Query: 135 SI-QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKF---------------- 177
+ H+N+V LLG C+ L++EY L + + +KF
Sbjct: 104 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 178 -----LNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232
L + +A+G+++L S VHRD+ A NVL+ KI DFGLAR
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLAR 220
Query: 233 FFPEDQAY-LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPS 291
D Y + N + + APE G + K+D++S+G+L+ EI S N +P
Sbjct: 221 DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280
Query: 292 EMQYLPEYAWKLYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEI 351
+ + +KL + G ++ P E ++ + C +RP +
Sbjct: 281 DANF-----YKLIQNG--FKMDQPFYATE--------EIYIIMQSCWAFDSRKRPSFPNL 325
Query: 352 VAMLTCKV 359
+ L C++
Sbjct: 326 TSFLGCQL 333
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 26/217 (11%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 140 NLVRLLGCCSD-GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII----------- 187
N+V LLG C+ G +++ E+ K +L + + ++F+ + + +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 188 ---LGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D +
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 245 FAG-TLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
A L + APE + ++D++SFGVL+ EI S
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 126/279 (45%), Gaps = 35/279 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 124
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T GTL Y P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPP 178
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 179 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 227
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIV 352
P EG RD + + L+ + +QRP + E++
Sbjct: 228 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVL 258
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 139 KNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L+ + +Y++ ++ S LNW + I
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 133
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 134 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 11/200 (5%)
Query: 90 LGRGGFGPVYR-GKLADGTLVAVKKLCVDKSQQGESEFL-SEVRMITSIQHKNLVRLLGC 147
+G G +G + + +DG ++ K+L + E + L SEV ++ ++H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 148 CSDGSQRLL--VYEYMKNRSLDLLIY--GESDKFLNWSTRFQIILGIARGLQYLHEDS-- 201
D + L V EY + L +I + ++L+ +++ + L+ H S
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 202 -HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
HT ++HRD+K +NV LD K K+GDFGLAR D ++ + F GT Y +PE R
Sbjct: 134 GHT-VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF-AKAFVGTPYYMSPEQMNRM 191
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+EK+DI+S G L+ E+ +
Sbjct: 192 SYNEKSDIWSLGCLLYELCA 211
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 121
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T GTL Y P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGTLDYLPP 175
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 176 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 224
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 225 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 126/279 (45%), Gaps = 35/279 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 118
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + T GTL Y P
Sbjct: 119 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPP 172
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 173 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 221
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIV 352
P EG RD + + L+ + +QRP + E++
Sbjct: 222 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVL 252
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 18/202 (8%)
Query: 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
G +G G FG VY+GK V + + QQ ++ F +EV ++ +H N++ +G
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMG 87
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
S Q +V ++ + SL ++ KF I ARG+ YLH S I+
Sbjct: 88 Y-STKPQLAIVTQWCEGSSLYHHLHASETKF-EMKKLIDIARQTARGMDYLHAKS---II 142
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLA----RFFPEDQAYLSTNFAGTLGYTAPEYAIRGEL 262
HRD+K++N+ L E KIGDFGLA R+ Q +G++ + APE IR +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF---EQLSGSILWMAPE-VIRMQD 198
Query: 263 SE----KADIYSFGVLVLEIIS 280
S ++D+Y+FG+++ E+++
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMT 220
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 27/212 (12%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQ 137
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 138 HKNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG 189
+ ++ RLLG C + +L+ + +Y++ ++ S LNW +
Sbjct: 73 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------ 122
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGT 248
IA G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y +
Sbjct: 123 IAEGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 249 LGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ + A E + + ++D++S+GV V E+++
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 147
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + + GTL Y P
Sbjct: 148 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYLPP 201
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEII 279
E I G + EK D++S GVL E +
Sbjct: 202 E-MIEGRMHDEKVDLWSLGVLCYEFL 226
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 123
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI +FG + P + T GTL Y P
Sbjct: 124 SYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPP 177
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 178 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 226
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 227 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 269
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 101/214 (47%), Gaps = 40/214 (18%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG GGFG V R D G VA+K+ + S + + E++++ + H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV- 80
Query: 149 SDGSQRL-------LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARG-------- 193
DG Q+L L EY + G+ K+LN +F+ G+ G
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEG--------GDLRKYLN---QFENCCGLKEGPIRTLLSD 129
Query: 194 ----LQYLHEDSHTRIVHRDIKASNVLLD---EKFQSKIGDFGLARFFPEDQAYLSTNFA 246
L+YLHE+ RI+HRD+K N++L ++ KI D G A+ DQ L T F
Sbjct: 130 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFV 184
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
GTL Y APE + + + D +SFG L E I+
Sbjct: 185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT 218
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 32/199 (16%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+ T VAVK + FL+E ++ ++QH LV+L +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTM--KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDK-----FLNWSTRFQIILGIARGLQYLHEDSHTR 204
++ K LD L E K +++S + IA G+ ++ + ++
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQRNY-- 299
Query: 205 IVHRDIKASNVLLDEKFQSKIGDFGLARF---FPEDQAYLSTNFAGTLGYTAPEYAIRGE 261
+HRD++A+N+L+ KI DFGLAR FP + +TAPE G
Sbjct: 300 -IHRDLRAANILVSASLVCKIADFGLARVGAKFP-------------IKWTAPEAINFGS 345
Query: 262 LSEKADIYSFGVLVLEIIS 280
+ K+D++SFG+L++EI++
Sbjct: 346 FTIKSDVWSFGILLMEIVT 364
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 101/214 (47%), Gaps = 40/214 (18%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG GGFG V R D G VA+K+ + S + + E++++ + H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV- 81
Query: 149 SDGSQRL-------LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARG-------- 193
DG Q+L L EY + G+ K+LN +F+ G+ G
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEG--------GDLRKYLN---QFENCCGLKEGPIRTLLSD 130
Query: 194 ----LQYLHEDSHTRIVHRDIKASNVLLD---EKFQSKIGDFGLARFFPEDQAYLSTNFA 246
L+YLHE+ RI+HRD+K N++L ++ KI D G A+ DQ L T F
Sbjct: 131 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFV 185
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
GTL Y APE + + + D +SFG L E I+
Sbjct: 186 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT 219
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 124
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI +FG + P + T GTL Y P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPP 178
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 179 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 227
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 228 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 127/295 (43%), Gaps = 43/295 (14%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ------IILGI 190
+H N++RL G D ++ L+ EY GE K L ++F I +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPR--------GEVYKELQKLSKFDEQRTATYITEL 122
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
A L Y H R++HRDIK N+LL + KI DFG + P + GTL
Sbjct: 123 ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLXGTLD 176
Query: 251 YTAPEYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRI 309
Y PE I G + EK D++S GVL E + + P E E Y+R
Sbjct: 177 YLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISR 225
Query: 310 LELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
+E P EG RD + + L+ + +QRP + E++ S P
Sbjct: 226 VEFTFPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 27/212 (12%)
Query: 83 NFHPGNLLGRGGFGPVYRGK-LADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQ 137
F +LG G FG VY+G + +G VA+ +L S + E L E ++ S+
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 138 HKNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG 189
+ ++ RLLG C + +L+ + +Y++ ++ S LNW +
Sbjct: 110 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------ 159
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGT 248
IA+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y +
Sbjct: 160 IAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 249 LGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ + A E + + ++D++S+GV V E+++
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 129/277 (46%), Gaps = 29/277 (10%)
Query: 83 NFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHK 139
NF +GRG F VYR L DG VA+KK+ + + ++ + E+ ++ + H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 140 NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLI--YGESDKFLNWSTRFQIILGIARGLQYL 197
N+++ + ++ +V E L +I + + + + T ++ + + L+++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 198 HEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYA 257
H R++HRDIK +NV + K+GD GL RFF + + + GT Y +PE
Sbjct: 153 HS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFF-SSKTTAAHSLVGTPYYMSPERI 208
Query: 258 IRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWK--LYERGRILELVD- 314
+ K+DI+S G L+ E+ + + P Y K LY + +E D
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQS-------------PFYGDKMNLYSLCKKIEQCDY 255
Query: 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEI 351
P + + E + Q++N +C+ P +RP ++ +
Sbjct: 256 PPLPSDHYSE-ELRQLVN---MCINPDPEKRPDVTYV 288
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 37/226 (16%)
Query: 83 NFHPGNLLGRGGFGPVYR------GKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI 136
N G LG G FG V GK VAVK L + +SE+++++ +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 137 -QHKNLVRLLGCCSDGSQRLLVYEY---------MKNRSLDLLIYG-----------ESD 175
QH+N+V LLG C+ G L++ EY ++ + L Y S
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSR 166
Query: 176 KFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFP 235
L++S++ +A+G+ +L + +HRD+ A NVLL +KIGDFGLAR
Sbjct: 167 DLLHFSSQ------VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 217
Query: 236 EDQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
D Y+ N + + APE + ++D++S+G+L+ EI S
Sbjct: 218 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 124
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + + GTL Y P
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYLPP 178
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 179 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 227
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 228 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 21/215 (9%)
Query: 77 LKKATKNFHPGNLLGRGGFGPVYRGK--LADGTLVAVKKLCVDKSQQGES----EFLSEV 130
L +A + + +G G +G V++ + G VA+K++ V ++G ++ +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 131 RMITSIQHKNLVRLLGCCS----DGSQRL-LVYEYMKNRSLDLLIYGES--DKFLNWSTR 183
R + + +H N+VRL C+ D +L LV+E++ DL Y + + + T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPEPGVPTETI 122
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243
++ + RGL +LH SH R+VHRD+K N+L+ Q K+ DFGLAR + A T
Sbjct: 123 KDMMFQLLRGLDFLH--SH-RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--T 177
Query: 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEI 278
+ TL Y APE ++ + D++S G + E+
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 26/215 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR---- 192
H N+V+LL ++ LV+E++ S+DL KF++ S I L + +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL---SMDL------KKFMDASALTGIPLPLIKSYLF 113
Query: 193 ----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T
Sbjct: 114 QLLQGLAFCH--SH-RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 169
Query: 249 LGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
L Y APE + + S DI+S G + E+++ R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 122
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + GTL Y P
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDTLCGTLDYLPP 176
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 177 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 225
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 226 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 21/204 (10%)
Query: 88 NLLGRGGFGPVYRGK-LADGTLVAVK---KLCVDKS-QQGESEFLSEVRMITSIQHKNLV 142
+LG G FG V++G + +G + + K+ DKS +Q + I S+ H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKF-----LNWSTRFQIILGIARGLQYL 197
RLLG C GS LV +Y+ SL + LNW + IA+G+ YL
Sbjct: 97 RLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYL 149
Query: 198 HEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT-LGYTAPEY 256
E +VHR++ A NVLL Q ++ DFG+A P D L + A T + + A E
Sbjct: 150 EEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 206
Query: 257 AIRGELSEKADIYSFGVLVLEIIS 280
G+ + ++D++S+GV V E+++
Sbjct: 207 IHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 127/284 (44%), Gaps = 35/284 (12%)
Query: 90 LGRGGFGPV---YRGKLADGT--LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG G FG V DGT +VAVK L Q S + E+ ++ ++ H+++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 145 LGCCSDGSQR--LLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDS 201
GCC D ++ LV EY+ SL D L + + I G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHAQH 132
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIR 259
+ +HR + A NVLLD KIGDFGLA+ PE Y G + + APE
Sbjct: 133 Y---IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 189
Query: 260 GELSEKADIYSFGVLVLEIIS-CRKN-------TDLTLPSEMQYLPEYAWKLYERGRILE 311
+ +D++SFGV + E+++ C N T+L ++ Q +L ERG L
Sbjct: 190 CKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERL- 248
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355
PR +R ++ ++ C + + RP +V +L
Sbjct: 249 ---PR------PDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 283
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 26/215 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR---- 192
H N+V+LL ++ LV+E++ S+DL KF++ S I L + +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL---SMDL------KKFMDASALTGIPLPLIKSYLF 111
Query: 193 ----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T
Sbjct: 112 QLLQGLAFCH--SH-RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 167
Query: 249 LGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
L Y APE + + S DI+S G + E+++ R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 123
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + GTL Y P
Sbjct: 124 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPP 177
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 178 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 226
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 227 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 269
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 127/284 (44%), Gaps = 35/284 (12%)
Query: 90 LGRGGFGPV---YRGKLADGT--LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG G FG V DGT +VAVK L Q S + E+ ++ ++ H+++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 145 LGCCSDGSQR--LLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDS 201
GCC D ++ LV EY+ SL D L + + I G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHAQH 131
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIR 259
+ +HR + A NVLLD KIGDFGLA+ PE Y G + + APE
Sbjct: 132 Y---IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 188
Query: 260 GELSEKADIYSFGVLVLEIIS-CRKN-------TDLTLPSEMQYLPEYAWKLYERGRILE 311
+ +D++SFGV + E+++ C N T+L ++ Q +L ERG L
Sbjct: 189 CKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERL- 247
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355
PR +R ++ ++ C + + RP +V +L
Sbjct: 248 ---PR------PDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 282
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 21/204 (10%)
Query: 88 NLLGRGGFGPVYRGK-LADGTLVAVK---KLCVDKS-QQGESEFLSEVRMITSIQHKNLV 142
+LG G FG V++G + +G + + K+ DKS +Q + I S+ H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKF-----LNWSTRFQIILGIARGLQYL 197
RLLG C GS LV +Y+ SL + LNW + IA+G+ YL
Sbjct: 79 RLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYL 131
Query: 198 HEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT-LGYTAPEY 256
E +VHR++ A NVLL Q ++ DFG+A P D L + A T + + A E
Sbjct: 132 EEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 188
Query: 257 AIRGELSEKADIYSFGVLVLEIIS 280
G+ + ++D++S+GV V E+++
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 121
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + GTL Y P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLPP 175
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 176 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 224
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 225 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 139 KNLVRLLGCCSDGSQRLLV--------YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L++ +Y++ ++ S LNW + I
Sbjct: 81 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 130
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFG A+ E++ Y + +
Sbjct: 131 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 187
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 26/213 (12%)
Query: 82 KNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQH 138
+NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR------ 192
N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 193 --GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T+ TL
Sbjct: 113 LQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW 168
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +L G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 139 KNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L+ + +Y++ ++ S LNW + I
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 126
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 127 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 82 KNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSIQH 138
++F G LG+G FG VY + + A+K L + ++ E + EV + + ++H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGLQY 196
N++RL G D ++ L+ EY + +Y E K + + I +A L Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSRFDEQRTATYITELANALSY 127
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEY 256
H R++HRDIK N+LL + KI DFG + P + T GTL Y PE
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE- 180
Query: 257 AIRGEL-SEKADIYSFGVLVLEII 279
I G + EK D++S GVL E +
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFL 204
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 21/215 (9%)
Query: 77 LKKATKNFHPGNLLGRGGFGPVYRGK--LADGTLVAVKKLCVDKSQQGES----EFLSEV 130
L +A + + +G G +G V++ + G VA+K++ V ++G ++ +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 131 RMITSIQHKNLVRLLGCCS----DGSQRL-LVYEYMKNRSLDLLIYGES--DKFLNWSTR 183
R + + +H N+VRL C+ D +L LV+E++ DL Y + + + T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPEPGVPTETI 122
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243
++ + RGL +LH SH R+VHRD+K N+L+ Q K+ DFGLAR + A T
Sbjct: 123 KDMMFQLLRGLDFLH--SH-RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--T 177
Query: 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEI 278
+ TL Y APE ++ + D++S G + E+
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 26/213 (12%)
Query: 82 KNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQH 138
+NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR------ 192
N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 193 --GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T+ TL
Sbjct: 113 LQGLSFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW 168
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +L G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 139 KNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L+ + +Y++ ++ S LNW + I
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 133
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 134 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 26/213 (12%)
Query: 82 KNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQH 138
+NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR------ 192
N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLFQL 116
Query: 193 --GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T+ TL
Sbjct: 117 LQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW 172
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 90 LGRGGFGPVYRGKLADGT--LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G+G FG VY+G + + T +VA+K + +++++ + E+ +++ + R G
Sbjct: 27 IGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 148 CSDGSQRLLVYEYMKNRS-LDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
++ ++ EY+ S LDLL G L + I+ I +GL YLH + R +
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLLKPGP----LEETYIATILREILKGLDYLHSE---RKI 138
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKA 266
HRDIKA+NVLL E+ K+ DFG+A + Q F GT + APE + KA
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 267 DIYSFGVLVLEIISCR-KNTDL 287
DI+S G+ +E+ N+DL
Sbjct: 198 DIWSLGITAIELAKGEPPNSDL 219
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 139 KNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L+ + +Y++ ++ S LNW + I
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 126
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFG A+ E++ Y + +
Sbjct: 127 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 183
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 40/264 (15%)
Query: 109 VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRS-LD 167
VA+K++ ++K Q E L E++ ++ H N+V + LV + + S LD
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 168 LLIY----GESDK-FLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQ 222
++ + GE L+ ST I+ + GL+YLH++ +HRD+KA N+LL E
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 154
Query: 223 SKIGDFGLARFFPE----DQAYLSTNFAGTLGYTAPEYA--IRGELSEKADIYSFGVLVL 276
+I DFG++ F + + F GT + APE +RG KADI+SFG+ +
Sbjct: 155 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAI 213
Query: 277 EIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV---DPRMRKEGIVERDALQVINV 333
E+ + + Y ++L L DP + G+ +++ L+
Sbjct: 214 ELATGAA----------------PYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK 257
Query: 334 AF-----ICLQPHGNQRPPMSEIV 352
+F +CLQ +RP +E++
Sbjct: 258 SFRKMISLCLQKDPEKRPTAAELL 281
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 44/230 (19%)
Query: 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQH--- 138
+F +LG+G FG V + + A D A+KK + +++ S LSEV ++ S+ H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKK--IRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 139 ----------KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGES-----DKFLNWSTR 183
+N V+ + S + EY +NR+L LI+ E+ D++ W
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY--WRLF 122
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS- 242
QI+ L Y+H I+HRD+K N+ +DE KIGDFGLA+ L
Sbjct: 123 RQIL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 243 ------------TNFAGTLGYTAPEYAI-RGELSEKADIYSFGVLVLEII 279
T+ GT Y A E G +EK D+YS G++ E+I
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 26/213 (12%)
Query: 82 KNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQH 138
+NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR------ 192
N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLFQL 119
Query: 193 --GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T+ TL
Sbjct: 120 LQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW 175
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 21/215 (9%)
Query: 77 LKKATKNFHPGNLLGRGGFGPVYRGK--LADGTLVAVKKLCVDKSQQGES----EFLSEV 130
L +A + + +G G +G V++ + G VA+K++ V ++G ++ +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 131 RMITSIQHKNLVRLLGCCS----DGSQRL-LVYEYMKNRSLDLLIYGES--DKFLNWSTR 183
R + + +H N+VRL C+ D +L LV+E++ DL Y + + + T
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPEPGVPTETI 122
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243
++ + RGL +LH SH R+VHRD+K N+L+ Q K+ DFGLAR + A T
Sbjct: 123 KDMMFQLLRGLDFLH--SH-RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--T 177
Query: 244 NFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEI 278
+ TL Y APE ++ + D++S G + E+
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +L G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 139 KNLVRLLGCCSDGSQRLLV--------YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L++ +Y++ ++ S LNW + I
Sbjct: 84 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 133
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFGLA+ E++ Y + +
Sbjct: 134 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G VY+ K + G +VA+K++ +D +G S + E+ ++ + H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIIL-GIARGLQYLHEDSHTRIVH 207
LV+E+M+ DL + +K ++ +I L + RG+ + H+ RI+H
Sbjct: 89 HSERCLTLVFEFMEK---DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILH 142
Query: 208 RDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAI-RGELSEK 265
RD+K N+L++ K+ DFGLAR F ++Y T+ TL Y AP+ + + S
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTS 200
Query: 266 ADIYSFGVLVLEIISCR 282
DI+S G + E+I+ +
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 22/213 (10%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKF------LNWSTRFQIILGI 190
H N+V+LL ++ LV+E++ S+DL + ++ L S FQ++
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLL--- 116
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
+GL + H SH R++HRD+K N+L++ + K+ DFGLAR F TL
Sbjct: 117 -QGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 171
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 139 KNLVRLLGCCSDGSQRLLV--------YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L++ +Y++ ++ S LNW + I
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 128
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFG A+ E++ Y + +
Sbjct: 129 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 22/213 (10%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKF------LNWSTRFQIILGI 190
H N+V+LL ++ LV+E++ S+DL + ++ L S FQ++
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLL--- 115
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
+GL + H SH R++HRD+K N+L++ + K+ DFGLAR F TL
Sbjct: 116 -QGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 170
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 124
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + GTL Y P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLPP 178
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 179 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 227
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 228 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 139 KNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L+ + +Y++ ++ S LNW + I
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 128
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFG A+ E++ Y + +
Sbjct: 129 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G VY+ K + G +VA+K++ +D +G S + E+ ++ + H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIIL-GIARGLQYLHEDSHTRIVH 207
LV+E+M+ DL + +K ++ +I L + RG+ + H+ RI+H
Sbjct: 89 HSERCLTLVFEFMEK---DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILH 142
Query: 208 RDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAI-RGELSEK 265
RD+K N+L++ K+ DFGLAR F ++Y T+ TL Y AP+ + + S
Sbjct: 143 RDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTS 200
Query: 266 ADIYSFGVLVLEIISCR 282
DI+S G + E+I+ +
Sbjct: 201 VDIWSIGCIFAEMITGK 217
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 26/213 (12%)
Query: 82 KNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQH 138
+NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR------ 192
N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 193 --GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T+ TL
Sbjct: 113 LQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW 168
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 26/213 (12%)
Query: 82 KNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQH 138
+NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR------ 192
N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 193 --GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T+ TL
Sbjct: 112 LQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW 167
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 35/291 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 121
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + GTL Y P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPP 175
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV 313
E I G + EK D++S GVL E + + P E E Y+R +E
Sbjct: 176 E-MIEGRMHDEKVDLWSLGVLCYEFLVGKP------PFEANTYQE----TYKRISRVEFT 224
Query: 314 DPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAMLTCKVESGIP 364
P EG RD + + L+ + +QRP + E++ S P
Sbjct: 225 FPDFVTEGA--RDLISRL------LKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 40/264 (15%)
Query: 109 VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRS-LD 167
VA+K++ ++K Q E L E++ ++ H N+V + LV + + S LD
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 168 LLIY----GESDK-FLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQ 222
++ + GE L+ ST I+ + GL+YLH++ +HRD+KA N+LL E
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 159
Query: 223 SKIGDFGLARFFPE----DQAYLSTNFAGTLGYTAPEYA--IRGELSEKADIYSFGVLVL 276
+I DFG++ F + + F GT + APE +RG KADI+SFG+ +
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAI 218
Query: 277 EIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELV---DPRMRKEGIVERDALQVINV 333
E+ + + Y ++L L DP + G+ +++ L+
Sbjct: 219 ELATGAA----------------PYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK 262
Query: 334 AF-----ICLQPHGNQRPPMSEIV 352
+F +CLQ +RP +E++
Sbjct: 263 SFRKMISLCLQKDPEKRPTAAELL 286
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 26/213 (12%)
Query: 82 KNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQH 138
+NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR------ 192
N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 193 --GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T+ TL
Sbjct: 112 LQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW 167
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 139 KNLVRLLGCCSDGSQRLLV--------YEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L++ +Y++ ++ S LNW + I
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 128
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFG A+ E++ Y + +
Sbjct: 129 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 27/211 (12%)
Query: 84 FHPGNLLGRGGFGPVYRG-KLADG----TLVAVKKLCVDKSQQGESEFLSEVRMITSIQH 138
F +LG G FG VY+G + +G VA+K+L S + E L E ++ S+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 139 KNLVRLLGCCSDGSQRLL--------VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGI 190
++ RLLG C + +L+ + +Y++ ++ S LNW + I
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNI----GSQYLLNWCVQ------I 133
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
A+G+ YL + R+VHRD+ A NVL+ KI DFG A+ E++ Y + +
Sbjct: 134 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 190
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ A E + + ++D++S+GV V E+++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 26/215 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR---- 192
H N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 193 ----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T+ T
Sbjct: 112 QLLQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVT 167
Query: 249 LGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
L Y APE + + S DI+S G + E+++ R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + A+K L + ++ E + EV + + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 124
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H R++HRDIK N+LL + KI DFG + P + GTL Y P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPP 178
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEII 279
E I G + EK D++S GVL E +
Sbjct: 179 E-MIEGRMHDEKVDLWSLGVLCYEFL 203
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 32/231 (13%)
Query: 83 NFHPGNLLGRGGFGPVYRGKL-----ADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSI 136
N G LG G FG V D L VAVK L + +SE+++++ +
Sbjct: 32 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 91
Query: 137 -QHKNLVRLLGCCSDGSQRLLVYEY---------MKNRSLDLL------------IYGES 174
QH+N+V LLG C+ G L++ EY ++ ++ +L + E
Sbjct: 92 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKED 151
Query: 175 DKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF 234
+ L +A+G+ +L + +HRD+ A NVLL +KIGDFGLAR
Sbjct: 152 GRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 208
Query: 235 PEDQAYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKN 284
D Y+ N + + APE + ++D++S+G+L+ EI S N
Sbjct: 209 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 259
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 26/213 (12%)
Query: 82 KNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQH 138
+NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR------ 192
N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 193 --GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T+ TL
Sbjct: 113 LQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW 168
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 105/193 (54%), Gaps = 14/193 (7%)
Query: 90 LGRGGFGPVYRGKLADGT--LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G+G FG V++G + + T +VA+K + +++++ + E+ +++ + + G
Sbjct: 15 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 148 CSDGSQRLLVYEYMKNRS-LDLLIYGESDKFLNWSTRFQIIL-GIARGLQYLHEDSHTRI 205
++ ++ EY+ S LDLL G D+ T+ IL I +GL YLH + +
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPGPLDE-----TQIATILREILKGLDYLHSE---KK 125
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEK 265
+HRDIKA+NVLL E + K+ DFG+A + Q +T F GT + APE + K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIKQSAYDSK 184
Query: 266 ADIYSFGVLVLEI 278
ADI+S G+ +E+
Sbjct: 185 ADIWSLGITAIEL 197
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 26/213 (12%)
Query: 82 KNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQH 138
+NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR------ 192
N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLFQL 119
Query: 193 --GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T+ TL
Sbjct: 120 LQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW 175
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 90 LGRGGFGPVYRGKL----ADGTLVAVKKLCVDKSQQGES--EFLSEVRMITSIQHKNLVR 143
LG G FG V RG+ VAVK L D Q E+ +F+ EV + S+ H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
L G +++ LD L + L +R+ + +A G+ YL
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES---K 130
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE--DQAYLSTNFAGTLGYTAPEYAIRGE 261
R +HRD+ A N+LL + KIGDFGL R P+ D + + + APE
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT 190
Query: 262 LSEKADIYSFGVLVLEIIS 280
S +D + FGV + E+ +
Sbjct: 191 FSHASDTWMFGVTLWEMFT 209
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 109/203 (53%), Gaps = 26/203 (12%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
+G G FG VY+GK V + K+ VD + + F +EV ++ +H N++ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKV-VDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR----GLQYLHEDSHTRI 205
+ +V ++ + SL ++ + KF FQ+I IAR G+ YLH + I
Sbjct: 103 KDN-LAIVTQWCEGSSLYKHLHVQETKF----QMFQLI-DIARQTAQGMDYLHAKN---I 153
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLA----RFFPEDQAYLSTNFAGTLGYTAPEYAIRGE 261
+HRD+K++N+ L E KIGDFGLA R+ Q T G++ + APE IR +
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT---GSVLWMAPE-VIRMQ 209
Query: 262 ----LSEKADIYSFGVLVLEIIS 280
S ++D+YS+G+++ E+++
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMT 232
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
G +G G FG VY+GK V + + QQ ++ F +EV ++ +H N++ +G
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMG 71
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
S Q +V ++ + SL ++ KF I A+G+ YLH S I+
Sbjct: 72 Y-STAPQLAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLSTNFAGTLGYTAPEYAIRGE---- 261
HRD+K++N+ L E KIGDFGLA ++ +G++ + APE IR +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 185
Query: 262 LSEKADIYSFGVLVLEIIS 280
S ++D+Y+FG+++ E+++
Sbjct: 186 YSFQSDVYAFGIVLYELMT 204
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 22/211 (10%)
Query: 82 KNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQH 138
+NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKF------LNWSTRFQIILGIAR 192
N+V+LL ++ LV+E++ DL + ++ L S FQ++ +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQ---DLKTFMDASALTGIPLPLIKSYLFQLL----Q 113
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T+ TL Y
Sbjct: 114 GLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYR 169
Query: 253 APEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
APE + + S DI+S G + E+++ R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSI 136
A ++F G LG+G FG VY + + + A+K L + ++ E + EV + + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGL 194
+H N++RL G D ++ L+ EY + +Y E K + + I +A L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANAL 121
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
Y H +++HRDIK N+LL + KI DFG + P + GTL Y P
Sbjct: 122 SYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLPP 175
Query: 255 EYAIRGEL-SEKADIYSFGVLVLEII 279
E I G + EK D++S GVL E +
Sbjct: 176 E-MIEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 90 LGRGGFGPVYRGKL----ADGTLVAVKKLCVDKSQQGES--EFLSEVRMITSIQHKNLVR 143
LG G FG V RG+ VAVK L D Q E+ +F+ EV + S+ H+NL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
L G +++ LD L + L +R+ + +A G+ YL
Sbjct: 86 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES---K 140
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE--DQAYLSTNFAGTLGYTAPEYAIRGE 261
R +HRD+ A N+LL + KIGDFGL R P+ D + + + APE
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT 200
Query: 262 LSEKADIYSFGVLVLEIIS 280
S +D + FGV + E+ +
Sbjct: 201 FSHASDTWMFGVTLWEMFT 219
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFL----SEVRMITSI 136
++F GNLLG+G F VYR + + G VA+K +DK ++ + +EV++ +
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIK--MIDKKAMYKAGMVQRVQNEVKIHCQL 68
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
+H +++ L D + LV E N ++ + F R + I G+ Y
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-HFMHQIITGMLY 127
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF--PEDQAYLSTNFAGTLGYTAP 254
LH SH I+HRD+ SN+LL KI DFGLA P ++ Y GT Y +P
Sbjct: 128 LH--SHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY---TLCGTPNYISP 181
Query: 255 EYAIRGELSEKADIYSFGVLVLEIISCR 282
E A R ++D++S G + ++ R
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 105/193 (54%), Gaps = 14/193 (7%)
Query: 90 LGRGGFGPVYRGKLADGT--LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G+G FG V++G + + T +VA+K + +++++ + E+ +++ + + G
Sbjct: 35 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 93
Query: 148 CSDGSQRLLVYEYMKNRS-LDLLIYGESDKFLNWSTRFQIIL-GIARGLQYLHEDSHTRI 205
++ ++ EY+ S LDLL G D+ T+ IL I +GL YLH + +
Sbjct: 94 YLKDTKLWIIMEYLGGGSALDLLEPGPLDE-----TQIATILREILKGLDYLHSE---KK 145
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEK 265
+HRDIKA+NVLL E + K+ DFG+A + Q +T F GT + APE + K
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIKQSAYDSK 204
Query: 266 ADIYSFGVLVLEI 278
ADI+S G+ +E+
Sbjct: 205 ADIWSLGITAIEL 217
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 90 LGRGGFGPVYRGKL----ADGTLVAVKKLCVDKSQQGES--EFLSEVRMITSIQHKNLVR 143
LG G FG V RG+ VAVK L D Q E+ +F+ EV + S+ H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
L G +++ LD L + L +R+ + +A G+ YL
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES---K 130
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFP--EDQAYLSTNFAGTLGYTAPEYAIRGE 261
R +HRD+ A N+LL + KIGDFGL R P +D + + + APE
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 262 LSEKADIYSFGVLVLEIIS 280
S +D + FGV + E+ +
Sbjct: 191 FSHASDTWMFGVTLWEMFT 209
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 12/201 (5%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQHKNLV 142
+H +G G +G VY+ + G A+KK+ ++K +G S + E+ ++ ++H N+V
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+L + +LV+E++ LL E L T +L + G+ Y H+
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHD--- 118
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFF--PEDQAYLSTNFAGTLGYTAPEYAI-R 259
R++HRD+K N+L++ + + KI DFGLAR F P + T+ TL Y AP+ +
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY---THEVVTLWYRAPDVLMGS 175
Query: 260 GELSEKADIYSFGVLVLEIIS 280
+ S DI+S G + E+++
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVN 196
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 90 LGRGGFGPVYRGKL----ADGTLVAVKKLCVDKSQQGES--EFLSEVRMITSIQHKNLVR 143
LG G FG V RG+ VAVK L D Q E+ +F+ EV + S+ H+NL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
L G +++ LD L + L +R+ + +A G+ YL
Sbjct: 80 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES---K 134
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE--DQAYLSTNFAGTLGYTAPEYAIRGE 261
R +HRD+ A N+LL + KIGDFGL R P+ D + + + APE
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 194
Query: 262 LSEKADIYSFGVLVLEIIS 280
S +D + FGV + E+ +
Sbjct: 195 FSHASDTWMFGVTLWEMFT 213
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Query: 78 KKATKNFHPGNLLGRGGFGPVY----RGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMI 133
K + ++F LG G FG V+ R + +KK V + +Q E E M+
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHT-NDERLML 60
Query: 134 TSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARG 193
+ + H ++R+ G D Q ++ +Y++ L L+ +S +F N +F +
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL-RKSQRFPNPVAKF-YAAEVCLA 118
Query: 194 LQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
L+YLH I++RD+K N+LLD+ KI DFG A++ P+ ++ GT Y A
Sbjct: 119 LEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIA 171
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIIS 280
PE ++ D +SFG+L+ E+++
Sbjct: 172 PEVVSTKPYNKSIDWWSFGILIYEMLA 198
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 12/201 (5%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQHKNLV 142
+H +G G +G VY+ + G A+KK+ ++K +G S + E+ ++ ++H N+V
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+L + +LV+E++ LL E L T +L + G+ Y H+
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHD--- 118
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFF--PEDQAYLSTNFAGTLGYTAPEYAI-R 259
R++HRD+K N+L++ + + KI DFGLAR F P + T+ TL Y AP+ +
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK---YTHEVVTLWYRAPDVLMGS 175
Query: 260 GELSEKADIYSFGVLVLEIIS 280
+ S DI+S G + E+++
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVN 196
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
G +G G FG VY+GK V + + QQ ++ F +EV ++ +H N++ +G
Sbjct: 15 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMG 73
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
S Q +V ++ + SL ++ KF I A+G+ YLH S I+
Sbjct: 74 Y-STKPQLAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKS---II 128
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLSTNFAGTLGYTAPEYAIRGE---- 261
HRD+K++N+ L E KIGDFGLA ++ +G++ + APE IR +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 187
Query: 262 LSEKADIYSFGVLVLEIIS 280
S ++D+Y+FG+++ E+++
Sbjct: 188 YSFQSDVYAFGIVLYELMT 206
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 90 LGRGGFGPVYRGKL----ADGTLVAVKKLCVDKSQQGES--EFLSEVRMITSIQHKNLVR 143
LG G FG V RG+ VAVK L D Q E+ +F+ EV + S+ H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
L G +++ LD L + L +R+ + +A G+ YL
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES---K 130
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE--DQAYLSTNFAGTLGYTAPEYAIRGE 261
R +HRD+ A N+LL + KIGDFGL R P+ D + + + APE
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 262 LSEKADIYSFGVLVLEIIS 280
S +D + FGV + E+ +
Sbjct: 191 FSHASDTWMFGVTLWEMFT 209
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
G +G G FG VY+GK V + + QQ ++ F +EV ++ +H N++ +G
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMG 71
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
S Q +V ++ + SL ++ KF I A+G+ YLH S I+
Sbjct: 72 Y-STKPQLAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLSTNFAGTLGYTAPEYAIRGE---- 261
HRD+K++N+ L E KIGDFGLA ++ +G++ + APE IR +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 185
Query: 262 LSEKADIYSFGVLVLEIIS 280
S ++D+Y+FG+++ E+++
Sbjct: 186 YSFQSDVYAFGIVLYELMT 204
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 90 LGRGGFGPVYRGKL----ADGTLVAVKKLCVDKSQQGES--EFLSEVRMITSIQHKNLVR 143
LG G FG V RG+ VAVK L D Q E+ +F+ EV + S+ H+NL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
L G +++ LD L + L +R+ + +A G+ YL
Sbjct: 86 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES---K 140
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE--DQAYLSTNFAGTLGYTAPEYAIRGE 261
R +HRD+ A N+LL + KIGDFGL R P+ D + + + APE
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 200
Query: 262 LSEKADIYSFGVLVLEIIS 280
S +D + FGV + E+ +
Sbjct: 201 FSHASDTWMFGVTLWEMFT 219
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
G +G G FG VY+GK V + + QQ ++ F +EV ++ +H N++ +G
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMG 76
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
S Q +V ++ + SL ++ KF I A+G+ YLH S I+
Sbjct: 77 Y-STKPQLAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLSTNFAGTLGYTAPEYAIRGE---- 261
HRD+K++N+ L E KIGDFGLA ++ +G++ + APE IR +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 190
Query: 262 LSEKADIYSFGVLVLEIIS 280
S ++D+Y+FG+++ E+++
Sbjct: 191 YSFQSDVYAFGIVLYELMT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 90 LGRGGFGPVYRGKL----ADGTLVAVKKLCVDKSQQGES--EFLSEVRMITSIQHKNLVR 143
LG G FG V RG+ VAVK L D Q E+ +F+ EV + S+ H+NL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
L G +++ LD L + L +R+ + +A G+ YL
Sbjct: 80 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES---K 134
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE--DQAYLSTNFAGTLGYTAPEYAIRGE 261
R +HRD+ A N+LL + KIGDFGL R P+ D + + + APE
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 194
Query: 262 LSEKADIYSFGVLVLEIIS 280
S +D + FGV + E+ +
Sbjct: 195 FSHASDTWMFGVTLWEMFT 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
G +G G FG VY+GK V + + QQ ++ F +EV ++ +H N++ +G
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMG 76
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
S Q +V ++ + SL ++ KF I A+G+ YLH S I+
Sbjct: 77 Y-STKPQLAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLSTNFAGTLGYTAPEYAIRGE---- 261
HRD+K++N+ L E KIGDFGLA ++ +G++ + APE IR +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 190
Query: 262 LSEKADIYSFGVLVLEIIS 280
S ++D+Y+FG+++ E+++
Sbjct: 191 YSFQSDVYAFGIVLYELMT 209
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 12/201 (5%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQHKNLV 142
+H +G G +G VY+ + G A+KK+ ++K +G S + E+ ++ ++H N+V
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+L + +LV+E++ LL E L T +L + G+ Y H+
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHD--- 118
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFF--PEDQAYLSTNFAGTLGYTAPEYAI-R 259
R++HRD+K N+L++ + + KI DFGLAR F P + T+ TL Y AP+ +
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY---THEIVTLWYRAPDVLMGS 175
Query: 260 GELSEKADIYSFGVLVLEIIS 280
+ S DI+S G + E+++
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVN 196
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
G +G G FG VY+GK V + + QQ ++ F +EV ++ +H N++ +G
Sbjct: 40 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMG 98
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
S Q +V ++ + SL ++ KF I A+G+ YLH S I+
Sbjct: 99 Y-STKPQLAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKS---II 153
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLSTNFAGTLGYTAPEYAIRGE---- 261
HRD+K++N+ L E KIGDFGLA ++ +G++ + APE IR +
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 212
Query: 262 LSEKADIYSFGVLVLEIIS 280
S ++D+Y+FG+++ E+++
Sbjct: 213 YSFQSDVYAFGIVLYELMT 231
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 90 LGRGGFGPVYRG--KLADGTL-VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
LG G FG V +G ++ + VA+K L + E + E +++ + + +VRL+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
C +LV E L + G+ ++ + S +++ ++ G++YL E + V
Sbjct: 78 VCQ-AEALMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN---FV 132
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRGELSE 264
HRD+ A NVLL + +KI DFGL++ D +Y + AG L + APE + S
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 265 KADIYSFGVLVLEIIS 280
++D++S+GV + E +S
Sbjct: 193 RSDVWSYGVTMWEALS 208
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 22/213 (10%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKF------LNWSTRFQIILGI 190
H N+V+LL ++ LV+E++ DL + ++ L S FQ++
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKTFMDASALTGIPLPLIKSYLFQLL--- 116
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
+GL + H SH R++HRD+K N+L++ + K+ DFGLAR F TL
Sbjct: 117 -QGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 171
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR---- 192
H N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 193 ----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T
Sbjct: 111 QLLQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 166
Query: 249 LGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
L Y APE + + S DI+S G + E+++ R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
G +G G FG VY+GK V + + QQ ++ F +EV ++ +H N++ +G
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMG 99
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
S Q +V ++ + SL ++ KF I A+G+ YLH S I+
Sbjct: 100 Y-STKPQLAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARFFPE-DQAYLSTNFAGTLGYTAPEYAIRGE---- 261
HRD+K++N+ L E KIGDFGLA ++ +G++ + APE IR +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDKNP 213
Query: 262 LSEKADIYSFGVLVLEIIS 280
S ++D+Y+FG+++ E+++
Sbjct: 214 YSFQSDVYAFGIVLYELMT 232
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR---- 192
H N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 193 ----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T
Sbjct: 113 QLLQGLAFCH--SH-RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 168
Query: 249 LGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
L Y APE + + S DI+S G + E+++ R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR---- 192
H N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 193 ----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T
Sbjct: 113 QLLQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 168
Query: 249 LGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
L Y APE + + S DI+S G + E+++ R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR---- 192
H N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 193 ----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T
Sbjct: 114 QLLQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 169
Query: 249 LGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
L Y APE + + S DI+S G + E+++ R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR---- 192
H N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 193 ----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T
Sbjct: 113 QLLQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 168
Query: 249 LGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
L Y APE + + S DI+S G + E+++ R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR---- 192
H N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 193 ----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T
Sbjct: 111 QLLQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 166
Query: 249 LGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
L Y APE + + S DI+S G + E+++ R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR---- 192
H N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 193 ----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T
Sbjct: 114 QLLQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 169
Query: 249 LGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
L Y APE + + S DI+S G + E+++ R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 90 LGRGGFGPVYRGKLADGT--LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G+G FG V++G + + T +VA+K + +++++ + E+ +++ + + G
Sbjct: 30 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 88
Query: 148 CSDGSQRLLVYEYMKNRS-LDLLIYGESDKFLNWSTRFQIIL-GIARGLQYLHEDSHTRI 205
++ ++ EY+ S LDLL G D+ T+ IL I +GL YLH + +
Sbjct: 89 YLKDTKLWIIMEYLGGGSALDLLEPGPLDE-----TQIATILREILKGLDYLHSE---KK 140
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEK 265
+HRDIKA+NVLL E + K+ DFG+A + Q F GT + APE + K
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQSAYDSK 199
Query: 266 ADIYSFGVLVLEI 278
ADI+S G+ +E+
Sbjct: 200 ADIWSLGITAIEL 212
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR---- 192
H N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 193 ----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T
Sbjct: 112 QLLQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 167
Query: 249 LGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
L Y APE + + S DI+S G + E+++ R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR---- 192
H N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 193 ----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T
Sbjct: 111 QLLQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 166
Query: 249 LGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
L Y APE + + S DI+S G + E+++ R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 18/211 (8%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLL----IYGESDKFLNWSTRFQIILGIAR 192
H N+V+LL ++ LV+E++ D + + G + S FQ++ +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIK-SYLFQLL----Q 114
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F TL Y
Sbjct: 115 GLAFCH--SH-RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 170
Query: 253 APEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
APE + + S DI+S G + E+++ R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 18/202 (8%)
Query: 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
G +G G FG VY+GK V + + QQ ++ F +EV ++ +H N++ +G
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMG 71
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
S Q +V ++ + SL ++ KF I A+G+ YLH S I+
Sbjct: 72 Y-STKPQLAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLA----RFFPEDQAYLSTNFAGTLGYTAPEYAIRGE- 261
HRD+K++N+ L E KIGDFGLA R+ Q +G++ + APE IR +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF---EQLSGSILWMAPE-VIRMQD 182
Query: 262 ---LSEKADIYSFGVLVLEIIS 280
S ++D+Y+FG+++ E+++
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMT 204
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR---- 192
H N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 193 ----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T
Sbjct: 112 QLLQGLAFCH--SH-RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 167
Query: 249 LGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
L Y APE + + S DI+S G + E+++ R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 26/213 (12%)
Query: 82 KNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQH 138
+NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR------ 192
N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 193 --GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F TL
Sbjct: 112 LQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 167
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 26/213 (12%)
Query: 82 KNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQH 138
+NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR------ 192
N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 193 --GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F TL
Sbjct: 112 LQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 167
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 18/202 (8%)
Query: 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
G +G G FG VY+GK V + + QQ ++ F +EV ++ +H N++ +G
Sbjct: 33 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMG 91
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
S Q +V ++ + SL ++ KF I A+G+ YLH S I+
Sbjct: 92 Y-STKPQLAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKS---II 146
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLA----RFFPEDQAYLSTNFAGTLGYTAPEYAIRGE- 261
HRD+K++N+ L E KIGDFGLA R+ Q +G++ + APE IR +
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF---EQLSGSILWMAPE-VIRMQD 202
Query: 262 ---LSEKADIYSFGVLVLEIIS 280
S ++D+Y+FG+++ E+++
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMT 224
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR---- 192
H N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 193 ----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T
Sbjct: 111 QLLQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 166
Query: 249 LGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
L Y APE + + S DI+S G + E+++ R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 82 KNFHPGNLLGRGGFGPVYRGKLADGTLV-AVKKLCVDKSQQG--ESEFLSEVRMITSIQH 138
++F G LG+G FG VY + + A+K L + ++ E + EV + + ++H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIARGLQY 196
N++RL G D ++ L+ EY + +Y E K + + I +A L Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSRFDEQRTATYITELANALSY 127
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEY 256
H R++HRDIK N+LL + KI DFG + P + GTL Y PE
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RDTLCGTLDYLPPE- 180
Query: 257 AIRGEL-SEKADIYSFGVLVLEII 279
I G + EK D++S GVL E +
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFL 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR---- 192
H N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 193 ----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T
Sbjct: 115 QLLQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 170
Query: 249 LGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
L Y APE + + S DI+S G + E+++ R
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 90 LGRGGFGPVYRGKLADGT--LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G+G FG V++G + + T +VA+K + +++++ + E+ +++ + + G
Sbjct: 15 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 148 CSDGSQRLLVYEYMKNRS-LDLLIYGESDKFLNWSTRFQIIL-GIARGLQYLHEDSHTRI 205
++ ++ EY+ S LDLL G D+ T+ IL I +GL YLH + +
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPGPLDE-----TQIATILREILKGLDYLHSE---KK 125
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEK 265
+HRDIKA+NVLL E + K+ DFG+A + Q F GT + APE + K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RNXFVGTPFWMAPEVIKQSAYDSK 184
Query: 266 ADIYSFGVLVLEI 278
ADI+S G+ +E+
Sbjct: 185 ADIWSLGITAIEL 197
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 26/213 (12%)
Query: 82 KNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQH 138
+NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR------ 192
N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 193 --GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F TL
Sbjct: 114 LQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLW 169
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 26/213 (12%)
Query: 82 KNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQH 138
+NF +G G +G VY R KL G +VA+ K+ +D +G S + E+ ++ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR------ 192
N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 193 --GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T+ TL
Sbjct: 113 LQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW 168
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 26/213 (12%)
Query: 82 KNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQH 138
+NF +G G +G VY R KL G +VA+ K+ +D +G S + E+ ++ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR------ 192
N+V+LL ++ LV+E++ + + KF++ S I L + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 193 --GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T+ TL
Sbjct: 112 LQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW 167
Query: 251 YTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
Y APE + + S DI+S G + E+++ R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 18/202 (8%)
Query: 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
G +G G FG VY+GK V + + QQ ++ F +EV ++ +H N++ +G
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMG 99
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
S Q +V ++ + SL ++ KF I A+G+ YLH S I+
Sbjct: 100 Y-STKPQLAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLA----RFFPEDQAYLSTNFAGTLGYTAPEYAIRGE- 261
HRD+K++N+ L E KIGDFGLA R+ Q +G++ + APE IR +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF---EQLSGSILWMAPE-VIRMQD 210
Query: 262 ---LSEKADIYSFGVLVLEIIS 280
S ++D+Y+FG+++ E+++
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMT 232
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 102/196 (52%), Gaps = 14/196 (7%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG VY+ K + +A K+ KS++ +++ E+ ++ + H +V+LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIIL-GIARGLQYLHEDSHTRIVHR 208
+ ++ E+ ++D ++ E D+ L + Q++ + L +LH RI+HR
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIML-ELDRGLT-EPQIQVVCRQMLEALNFLHS---KRIIHR 133
Query: 209 DIKASNVLLDEKFQSKIGDFGL-ARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSE--- 264
D+KA NVL+ + ++ DFG+ A+ Q +F GT + APE + + +
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK--RDSFIGTPYWMAPEVVMCETMKDTPY 191
Query: 265 --KADIYSFGVLVLEI 278
KADI+S G+ ++E+
Sbjct: 192 DYKADIWSLGITLIEM 207
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQG----ESEFLSEVRMIT 134
AT + P +G G +G VY+ + G VA+K + V ++G ++ +R +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 135 SIQHKNLVRLLGCCSDGS-----QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG 189
+ +H N+VRL+ C+ + LV+E++ ++ L + L T ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL 249
RGL +LH + IVHRD+K N+L+ K+ DFGLAR + A TL
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPV--VVTL 175
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEI 278
Y APE ++ + D++S G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 102/196 (52%), Gaps = 14/196 (7%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG VY+ K + +A K+ KS++ +++ E+ ++ + H +V+LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIIL-GIARGLQYLHEDSHTRIVHR 208
+ ++ E+ ++D ++ E D+ L + Q++ + L +LH RI+HR
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIML-ELDRGLT-EPQIQVVCRQMLEALNFLHS---KRIIHR 141
Query: 209 DIKASNVLLDEKFQSKIGDFGL-ARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSE--- 264
D+KA NVL+ + ++ DFG+ A+ Q +F GT + APE + + +
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK--RDSFIGTPYWMAPEVVMCETMKDTPY 199
Query: 265 --KADIYSFGVLVLEI 278
KADI+S G+ ++E+
Sbjct: 200 DYKADIWSLGITLIEM 215
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 16/199 (8%)
Query: 90 LGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG G FG V +G K D VA+K L + E + E +++ + + +VR
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQID---VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
L+G C +LV E L + G+ ++ + S +++ ++ G++YL E +
Sbjct: 401 LIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN-- 456
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG--TLGYTAPEYAIRGE 261
VHR++ A NVLL + +KI DFGL++ D +Y + AG L + APE +
Sbjct: 457 -FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 515
Query: 262 LSEKADIYSFGVLVLEIIS 280
S ++D++S+GV + E +S
Sbjct: 516 FSSRSDVWSYGVTMWEALS 534
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 112/220 (50%), Gaps = 21/220 (9%)
Query: 74 FQTLKK---ATKNFHPGNL------LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGES 124
FQ++K+ T++ +P + LG G FG VY+ + + +++A K+ KS++
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE 79
Query: 125 EFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF 184
+++ E+ ++ S H N+V+LL + ++ E+ ++D ++ E ++ L S
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQ 138
Query: 185 QIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244
+ L YLH++ +I+HRD+KA N+L K+ DFG++ +
Sbjct: 139 VVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR-XIQRRDS 194
Query: 245 FAGTLGYTAPEYAIRGELSE------KADIYSFGVLVLEI 278
F GT + APE + E S+ KAD++S G+ ++E+
Sbjct: 195 FIGTPYWMAPE-VVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 90 LGRGGFGPVYRGKL-----ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG G FG V + G VAVK L + ++ E+ ++ ++ H+N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 145 LGCCSD--GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C++ G+ L+ E++ + SL + +K +N + + + I +G+ YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYL---GS 144
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST--NFAGTLGYTAPEYAIRG 260
+ VHRD+ A NVL++ + Q KIGDFGL + D+ + + + + APE ++
Sbjct: 145 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 204
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ +D++SFGV + E+++
Sbjct: 205 KFYIASDVWSFGVTLHELLT 224
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 112/220 (50%), Gaps = 21/220 (9%)
Query: 74 FQTLKK---ATKNFHPGNL------LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGES 124
FQ++K+ T++ +P + LG G FG VY+ + + +++A K+ KS++
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE 79
Query: 125 EFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF 184
+++ E+ ++ S H N+V+LL + ++ E+ ++D ++ E ++ L S
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQ 138
Query: 185 QIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244
+ L YLH++ +I+HRD+KA N+L K+ DFG++ +
Sbjct: 139 VVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR-TIQRRDS 194
Query: 245 FAGTLGYTAPEYAIRGELSE------KADIYSFGVLVLEI 278
F GT + APE + E S+ KAD++S G+ ++E+
Sbjct: 195 FIGTPYWMAPE-VVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 80 ATKNFHPGNLLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSI 136
+ +NF +G G +G VY R KL G +VA+KK+ +D +G S + E+ ++ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR---- 192
H N+V+LL ++ LV+E++ + KF++ S I L + +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQ---------DLKKFMDASALTGIPLPLIKSYLF 113
Query: 193 ----GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
GL + H SH R++HRD+K N+L++ + K+ DFGLAR F T
Sbjct: 114 QLLQGLAFCH--SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-T 169
Query: 249 LGYTAPEYAIRGE-LSEKADIYSFGVLVLEIISCR 282
L Y APE + + S DI+S G + E+++ R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 90 LGRGGFGPVYRGKL-----ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG G FG V + G VAVK L + ++ E+ ++ ++ H+N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 145 LGCCSD--GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C++ G+ L+ E++ + SL + +K +N + + + I +G+ YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYL---GS 132
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST--NFAGTLGYTAPEYAIRG 260
+ VHRD+ A NVL++ + Q KIGDFGL + D+ + + + + APE ++
Sbjct: 133 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 192
Query: 261 ELSEKADIYSFGVLVLEIIS 280
+ +D++SFGV + E+++
Sbjct: 193 KFYIASDVWSFGVTLHELLT 212
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQG----ESEFLSEVRMIT 134
AT + P +G G +G VY+ + G VA+K + V ++G ++ +R +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 135 SIQHKNLVRLLGCCSDGS-----QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG 189
+ +H N+VRL+ C+ + LV+E++ ++ L + L T ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL 249
RGL +LH + IVHRD+K N+L+ K+ DFGLAR + A TL
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--TL 175
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEI 278
Y APE ++ + D++S G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 104/230 (45%), Gaps = 44/230 (19%)
Query: 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQH--- 138
+F +LG+G FG V + + A D A+KK + +++ S LSEV ++ S+ H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKK--IRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 139 ----------KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGES-----DKFLNWSTR 183
+N V+ + S + EY +N +L LI+ E+ D++ W
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY--WRLF 122
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS- 242
QI+ L Y+H I+HRD+K N+ +DE KIGDFGLA+ L
Sbjct: 123 RQIL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 243 ------------TNFAGTLGYTAPEYAI-RGELSEKADIYSFGVLVLEII 279
T+ GT Y A E G +EK D+YS G++ E+I
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGE----SEFLSEVRMITSIQHKNLVRLL 145
LG G FG V +G +V + + K++ + E L+E ++ + + +VR++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G C + +LV E + L+ Y + ++ + +++ ++ G++YL E +
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNK--YLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 148
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRGELS 263
VHRD+ A NVLL + +KI DFGL++ D+ Y G + + APE + S
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 264 EKADIYSFGVLVLEIIS 280
K+D++SFGVL+ E S
Sbjct: 209 SKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGE----SEFLSEVRMITSIQHKNLVRLL 145
LG G FG V +G +V + + K++ + E L+E ++ + + +VR++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G C + +LV E + L+ Y + ++ + +++ ++ G++YL E +
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNK--YLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 148
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRGELS 263
VHRD+ A NVLL + +KI DFGL++ D+ Y G + + APE + S
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 264 EKADIYSFGVLVLEIIS 280
K+D++SFGVL+ E S
Sbjct: 209 SKSDVWSFGVLMWEAFS 225
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 126/293 (43%), Gaps = 42/293 (14%)
Query: 87 GNLLGRGGFGPVYRGKL-----ADGTLVAVKKLCVDKSQQGESE-FLSEVRMITSI-QHK 139
G LG G FG V +D + K+ + E E +SE+++++ + H
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 140 NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG---------- 189
N+V LLG C+ G L++ EY L + + D F+ T I+
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 190 ------IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+A+G+ +L + +HRD+ A N+LL +KI DFGLAR D Y +
Sbjct: 171 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWK 302
N + + APE + ++D++S+G+ + E+ S + +P + ++ +K
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-----YK 282
Query: 303 LYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355
+ + G ++ P E ++ ++ C +RP +IV ++
Sbjct: 283 MIKEG--FRMLSP--------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 111/220 (50%), Gaps = 21/220 (9%)
Query: 74 FQTLKK---ATKNFHPGNL------LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGES 124
FQ++K+ T++ +P + LG G FG VY+ + + +++A K+ KS++
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE 79
Query: 125 EFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF 184
+++ E+ ++ S H N+V+LL + ++ E+ ++D ++ E ++ L S
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQ 138
Query: 185 QIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244
+ L YLH++ +I+HRD+KA N+L K+ DFG++
Sbjct: 139 VVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR-XIQRRDX 194
Query: 245 FAGTLGYTAPEYAIRGELSE------KADIYSFGVLVLEI 278
F GT + APE + E S+ KAD++S G+ ++E+
Sbjct: 195 FIGTPYWMAPE-VVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGE----SEFLSEVRMITSIQHKNLVRLL 145
LG G FG V +G +V + + K++ + E L+E ++ + + +VR++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G C + +LV E + L+ Y + ++ + +++ ++ G++YL E +
Sbjct: 93 GIC-EAESWMLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 146
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRGELS 263
VHRD+ A NVLL + +KI DFGL++ D+ Y G + + APE + S
Sbjct: 147 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 206
Query: 264 EKADIYSFGVLVLEIIS 280
K+D++SFGVL+ E S
Sbjct: 207 SKSDVWSFGVLMWEAFS 223
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 110/227 (48%), Gaps = 34/227 (14%)
Query: 83 NFHPGNLLGRGGFGPVYRGKLA----DGTLVAVK----KLCVDKSQQGESEFLSEVRMIT 134
N+ LG G FG V KLA G VA+K K+ QG E E+ +
Sbjct: 14 NYQIVKTLGEGSFGKV---KLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLR 68
Query: 135 SIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIAR 192
++H ++++L + ++V EY N D ++ + DK R FQ I+
Sbjct: 69 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIIS--- 123
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
++Y H +IVHRD+K N+LLDE KI DFGL+ D +L T+ G+ Y
Sbjct: 124 AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTS-CGSPNYA 178
Query: 253 APEYAIRGEL--SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLP 297
APE I G+L + D++S GV +L ++ CR+ LP + + +P
Sbjct: 179 APE-VISGKLYAGPEVDVWSCGV-ILYVMLCRR-----LPFDDESIP 218
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 110/227 (48%), Gaps = 34/227 (14%)
Query: 83 NFHPGNLLGRGGFGPVYRGKLA----DGTLVAVK----KLCVDKSQQGESEFLSEVRMIT 134
N+ LG G FG V KLA G VA+K K+ QG E E+ +
Sbjct: 5 NYQIVKTLGEGSFGKV---KLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLR 59
Query: 135 SIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIAR 192
++H ++++L + ++V EY N D ++ + DK R FQ I+
Sbjct: 60 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIIS--- 114
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
++Y H +IVHRD+K N+LLDE KI DFGL+ D +L T+ G+ Y
Sbjct: 115 AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTS-CGSPNYA 169
Query: 253 APEYAIRGEL--SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLP 297
APE I G+L + D++S GV +L ++ CR+ LP + + +P
Sbjct: 170 APE-VISGKLYAGPEVDVWSCGV-ILYVMLCRR-----LPFDDESIP 209
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQG----ESEFLSEVRMIT 134
AT + P +G G +G VY+ + G VA+K + V ++G ++ +R +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 135 SIQHKNLVRLLGCCSDGS-----QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG 189
+ +H N+VRL+ C+ + LV+E++ ++ L + L T ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL 249
RGL +LH + IVHRD+K N+L+ K+ DFGLAR + A TL
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL--DPVVVTL 175
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEI 278
Y APE ++ + D++S G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 110/227 (48%), Gaps = 34/227 (14%)
Query: 83 NFHPGNLLGRGGFGPVYRGKLA----DGTLVAVK----KLCVDKSQQGESEFLSEVRMIT 134
N+ LG G FG V KLA G VA+K K+ QG E E+ +
Sbjct: 15 NYQIVKTLGEGSFGKV---KLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLR 69
Query: 135 SIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIAR 192
++H ++++L + ++V EY N D ++ + DK R FQ I+
Sbjct: 70 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIIS--- 124
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
++Y H +IVHRD+K N+LLDE KI DFGL+ D +L T+ G+ Y
Sbjct: 125 AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTS-CGSPNYA 179
Query: 253 APEYAIRGEL--SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLP 297
APE I G+L + D++S GV +L ++ CR+ LP + + +P
Sbjct: 180 APE-VISGKLYAGPEVDVWSCGV-ILYVMLCRR-----LPFDDESIP 219
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGE----SEFLSEVRMITSIQHKNLVRLL 145
LG G FG V +G +V + + K++ + E L+E ++ + + +VR++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G C + +LV E + L+ Y + ++ + +++ ++ G++YL E +
Sbjct: 79 GIC-EAESWMLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 132
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRGELS 263
VHRD+ A NVLL + +KI DFGL++ D+ Y G + + APE + S
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 264 EKADIYSFGVLVLEIIS 280
K+D++SFGVL+ E S
Sbjct: 193 SKSDVWSFGVLMWEAFS 209
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 25/211 (11%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G LVAVK+L Q + +F E++++ ++ +V+
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ-QRDFQREIQILKALHSDFIVKY 76
Query: 145 LGCC-SDGSQRL-LVYEYMKNRSL-DLLIYG----ESDKFLNWSTRFQIILGIARGLQYL 197
G G Q L LV EY+ + L D L ++ + L +S++ I +G++YL
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYL 130
Query: 198 HEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG--TLGYTAPE 255
R VHRD+ A N+L++ + KI DFGLA+ P D+ Y G + + APE
Sbjct: 131 ---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 187
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS-CRKNT 285
S ++D++SFGV++ E+ + C K+
Sbjct: 188 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 218
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGE----SEFLSEVRMITSIQHKNLVRLL 145
LG G FG V +G +V + + K++ + E L+E ++ + + +VR++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G C + +LV E + L+ Y + ++ + +++ ++ G++YL E +
Sbjct: 438 GIC-EAESWMLVMEMAELGPLNK--YLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 491
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRGELS 263
VHRD+ A NVLL + +KI DFGL++ D+ Y G + + APE + S
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 551
Query: 264 EKADIYSFGVLVLEIIS 280
K+D++SFGVL+ E S
Sbjct: 552 SKSDVWSFGVLMWEAFS 568
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGE----SEFLSEVRMITSIQHKNLVRLL 145
LG G FG V +G +V + + K++ + E L+E ++ + + +VR++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G C + +LV E + L+ Y + ++ + +++ ++ G++YL E +
Sbjct: 85 GIC-EAESWMLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 138
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRGELS 263
VHRD+ A NVLL + +KI DFGL++ D+ Y G + + APE + S
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 198
Query: 264 EKADIYSFGVLVLEIIS 280
K+D++SFGVL+ E S
Sbjct: 199 SKSDVWSFGVLMWEAFS 215
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 110/227 (48%), Gaps = 34/227 (14%)
Query: 83 NFHPGNLLGRGGFGPVYRGKLA----DGTLVAVK----KLCVDKSQQGESEFLSEVRMIT 134
N+ LG G FG V KLA G VA+K K+ QG E E+ +
Sbjct: 9 NYQIVKTLGEGSFGKV---KLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLR 63
Query: 135 SIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGIAR 192
++H ++++L + ++V EY N D ++ + DK R FQ I+
Sbjct: 64 LLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIIS--- 118
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
++Y H +IVHRD+K N+LLDE KI DFGL+ D +L T+ G+ Y
Sbjct: 119 AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTS-CGSPNYA 173
Query: 253 APEYAIRGEL--SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLP 297
APE I G+L + D++S GV +L ++ CR+ LP + + +P
Sbjct: 174 APE-VISGKLYAGPEVDVWSCGV-ILYVMLCRR-----LPFDDESIP 213
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGE----SEFLSEVRMITSIQHKNLVRLL 145
LG G FG V +G +V + + K++ + E L+E ++ + + +VR++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G C + +LV E + L+ Y + ++ + +++ ++ G++YL E +
Sbjct: 75 GIC-EAESWMLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 128
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRGELS 263
VHRD+ A NVLL + +KI DFGL++ D+ Y G + + APE + S
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188
Query: 264 EKADIYSFGVLVLEIIS 280
K+D++SFGVL+ E S
Sbjct: 189 SKSDVWSFGVLMWEAFS 205
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGE----SEFLSEVRMITSIQHKNLVRLL 145
LG G FG V +G +V + + K++ + E L+E ++ + + +VR++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G C + +LV E + L+ Y + ++ + +++ ++ G++YL E +
Sbjct: 437 GIC-EAESWMLVMEMAELGPLNK--YLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 490
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRGELS 263
VHRD+ A NVLL + +KI DFGL++ D+ Y G + + APE + S
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 550
Query: 264 EKADIYSFGVLVLEIIS 280
K+D++SFGVL+ E S
Sbjct: 551 SKSDVWSFGVLMWEAFS 567
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKS---QQGESEFLS-EVRMITSIQHKNLVRL 144
LG+GGF + AD V K+ V KS + + E +S E+ + S+ H+++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKI-VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 86
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF---QIILGIARGLQYLHEDS 201
G D +V E + RSL L ++ R+ QI+LG QYLH +
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGC----QYLHRN- 140
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGE 261
R++HRD+K N+ L+E + KIGDFGLA D T GT Y APE +
Sbjct: 141 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKG 197
Query: 262 LSEKADIYSFGVLVLEII--------SCRKNTDLTLPSEMQYLPEY 299
S + D++S G ++ ++ SC K T L + +P++
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 243
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 25/211 (11%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G LVAVK+L Q + +F E++++ ++ +V+
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ-QRDFQREIQILKALHSDFIVKY 77
Query: 145 LGCC-SDGSQRL-LVYEYMKNRSL-DLLIYG----ESDKFLNWSTRFQIILGIARGLQYL 197
G G Q L LV EY+ + L D L ++ + L +S++ I +G++YL
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYL 131
Query: 198 HEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG--TLGYTAPE 255
R VHRD+ A N+L++ + KI DFGLA+ P D+ Y G + + APE
Sbjct: 132 ---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 188
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS-CRKNT 285
S ++D++SFGV++ E+ + C K+
Sbjct: 189 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 219
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 25/211 (11%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G LVAVK+L Q + +F E++++ ++ +V+
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ-QRDFQREIQILKALHSDFIVKY 89
Query: 145 LGCC-SDGSQRL-LVYEYMKNRSL-DLLIYG----ESDKFLNWSTRFQIILGIARGLQYL 197
G G Q L LV EY+ + L D L ++ + L +S++ I +G++YL
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYL 143
Query: 198 HEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG--TLGYTAPE 255
R VHRD+ A N+L++ + KI DFGLA+ P D+ Y G + + APE
Sbjct: 144 ---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 200
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS-CRKNT 285
S ++D++SFGV++ E+ + C K+
Sbjct: 201 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 231
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKS---QQGESEFLS-EVRMITSIQHKNLVRL 144
LG+GGF + AD V K+ V KS + + E +S E+ + S+ H+++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKI-VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF---QIILGIARGLQYLHEDS 201
G D +V E + RSL L ++ R+ QI+LG QYLH +
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGC----QYLHRN- 136
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGE 261
R++HRD+K N+ L+E + KIGDFGLA D T GT Y APE +
Sbjct: 137 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKG 193
Query: 262 LSEKADIYSFGVLVLEII--------SCRKNTDLTLPSEMQYLPEY 299
S + D++S G ++ ++ SC K T L + +P++
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 239
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKS---QQGESEFLS-EVRMITSIQHKNLVRL 144
LG+GGF + AD V K+ V KS + + E +S E+ + S+ H+++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKI-VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF---QIILGIARGLQYLHEDS 201
G D +V E + RSL L ++ R+ QI+LG QYLH +
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGC----QYLHRN- 136
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGE 261
R++HRD+K N+ L+E + KIGDFGLA D T GT Y APE +
Sbjct: 137 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKG 193
Query: 262 LSEKADIYSFGVLVLEII--------SCRKNTDLTLPSEMQYLPEY 299
S + D++S G ++ ++ SC K T L + +P++
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 239
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGE----SEFLSEVRMITSIQHKNLVRLL 145
LG G FG V +G +V + + K++ + E L+E ++ + + +VR++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G C + +LV E + L+ Y + ++ + +++ ++ G++YL E +
Sbjct: 73 GIC-EAESWMLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 126
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRGELS 263
VHRD+ A NVLL + +KI DFGL++ D+ Y G + + APE + S
Sbjct: 127 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 186
Query: 264 EKADIYSFGVLVLEIIS 280
K+D++SFGVL+ E S
Sbjct: 187 SKSDVWSFGVLMWEAFS 203
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 67 RTISYFDFQTLKKATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESE 125
R++ D L+ F L+G G +G VY+G+ + G L A+K +D + E E
Sbjct: 9 RSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIK--VMDVTGDEEEE 66
Query: 126 FLSEVRMITSI-QHKNLVRLLGCCSDGS------QRLLVYEYMKNRSLDLLIYGESDKFL 178
E+ M+ H+N+ G + Q LV E+ S+ LI L
Sbjct: 67 IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTL 126
Query: 179 NWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ 238
I I RGL +LH+ +++HRDIK NVLL E + K+ DFG++
Sbjct: 127 KEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 183
Query: 239 AYLSTNFAGTLGYTAPEYAIRGELSE-----KADIYSFGVLVLEI 278
+T F GT + APE E + K+D++S G+ +E+
Sbjct: 184 GRRNT-FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 126/293 (43%), Gaps = 42/293 (14%)
Query: 87 GNLLGRGGFGPVYRGKL-----ADGTLVAVKKLCVDKSQQGESE-FLSEVRMITSI-QHK 139
G LG G FG V +D + K+ + E E +SE+++++ + H
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 140 NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG---------- 189
N+V LLG C+ G L++ EY L + + D F+ T I+
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 190 ------IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+A+G+ +L + +HRD+ A N+LL +KI DFGLAR D Y +
Sbjct: 171 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWK 302
N + + APE + ++D++S+G+ + E+ S + +P + ++ +K
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-----YK 282
Query: 303 LYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355
+ + G ++ P E ++ ++ C +RP +IV ++
Sbjct: 283 MIKEG--FRMLSP--------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 126/293 (43%), Gaps = 42/293 (14%)
Query: 87 GNLLGRGGFGPVYRGKL-----ADGTLVAVKKLCVDKSQQGESE-FLSEVRMITSI-QHK 139
G LG G FG V +D + K+ + E E +SE+++++ + H
Sbjct: 46 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 105
Query: 140 NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG---------- 189
N+V LLG C+ G L++ EY L + + D F+ T I+
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 190 ------IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+A+G+ +L + +HRD+ A N+LL +KI DFGLAR D Y +
Sbjct: 166 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWK 302
N + + APE + ++D++S+G+ + E+ S + +P + ++ +K
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-----YK 277
Query: 303 LYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355
+ + G ++ P E ++ ++ C +RP +IV ++
Sbjct: 278 MIKEG--FRMLSP--------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 320
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 126/293 (43%), Gaps = 42/293 (14%)
Query: 87 GNLLGRGGFGPVYRGKL-----ADGTLVAVKKLCVDKSQQGESE-FLSEVRMITSI-QHK 139
G LG G FG V +D + K+ + E E +SE+++++ + H
Sbjct: 44 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 103
Query: 140 NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG---------- 189
N+V LLG C+ G L++ EY L + + D F+ T I+
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 190 ------IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+A+G+ +L + +HRD+ A N+LL +KI DFGLAR D Y +
Sbjct: 164 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWK 302
N + + APE + ++D++S+G+ + E+ S + +P + ++ +K
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-----YK 275
Query: 303 LYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355
+ + G ++ P E ++ ++ C +RP +IV ++
Sbjct: 276 MIKEG--FRMLSP--------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 318
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 126/293 (43%), Gaps = 42/293 (14%)
Query: 87 GNLLGRGGFGPVYRGKL-----ADGTLVAVKKLCVDKSQQGESE-FLSEVRMITSI-QHK 139
G LG G FG V +D + K+ + E E +SE+++++ + H
Sbjct: 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 87
Query: 140 NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG---------- 189
N+V LLG C+ G L++ EY L + + D F+ T I+
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 190 ------IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAY-LS 242
+A+G+ +L + +HRD+ A N+LL +KI DFGLAR D Y +
Sbjct: 148 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWK 302
N + + APE + ++D++S+G+ + E+ S + +P + ++ +K
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-----YK 259
Query: 303 LYERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355
+ + G ++ P E ++ ++ C +RP +IV ++
Sbjct: 260 MIKEG--FRMLSP--------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 102/230 (44%), Gaps = 44/230 (19%)
Query: 83 NFHPGNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQH--- 138
+F +LG+G FG V + + A D A+KK + +++ S LSEV ++ S+ H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKK--IRHTEEKLSTILSEVXLLASLNHQYV 64
Query: 139 ----------KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGES-----DKFLNWSTR 183
+N V+ S + EY +NR+L LI+ E+ D++ W
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY--WRLF 122
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS- 242
QI+ L Y+H I+HR++K N+ +DE KIGDFGLA+ L
Sbjct: 123 RQIL----EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 243 ------------TNFAGTLGYTAPEYAI-RGELSEKADIYSFGVLVLEII 279
T+ GT Y A E G +EK D YS G++ E I
Sbjct: 176 DSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 13/208 (6%)
Query: 74 FQTLKKATKNFHPGNLLGRGGFGPVYRGKLAD-GTLVAVKK-LCVDKSQQGESEFLSEVR 131
FQ+++K + L+G G +G V + + D G +VA+KK L D + + + E++
Sbjct: 21 FQSMEK----YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIK 76
Query: 132 MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIA 191
++ ++H+NLV LL C + LV+E++ + LD L + L++ + + I
Sbjct: 77 LLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG--LDYQVVQKYLFQII 134
Query: 192 RGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGY 251
G+ + H SH I+HRDIK N+L+ + K+ DFG AR A T Y
Sbjct: 135 NGIGFCH--SHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA-TRWY 190
Query: 252 TAPEYAIRGELSEKA-DIYSFGVLVLEI 278
APE + KA D+++ G LV E+
Sbjct: 191 RAPELLVGDVKYGKAVDVWAIGCLVTEM 218
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 107/209 (51%), Gaps = 15/209 (7%)
Query: 80 ATKNFHPGN---LLGR-GGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITS 135
T++ +P + ++G G FG VY+ + + +++A K+ KS++ +++ E+ ++ S
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 63
Query: 136 IQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQ 195
H N+V+LL + ++ E+ ++D ++ E ++ L S + L
Sbjct: 64 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALN 122
Query: 196 YLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPE 255
YLH++ +I+HRD+KA N+L K+ DFG++ +F GT + APE
Sbjct: 123 YLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPE 179
Query: 256 YAIRGELSE------KADIYSFGVLVLEI 278
+ E S+ KAD++S G+ ++E+
Sbjct: 180 -VVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 90 LGRGGFGPVYRGKL---ADG---TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG FG VY+G L A G VA+K L EF E + +QH N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIY--------GESD------KFLNWSTRFQIILG 189
LLG + +++ Y + L + G +D L ++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR-FFPEDQAYLSTNFAGT 248
IA G++YL S +VH+D+ NVL+ +K KI D GL R + D L N
Sbjct: 154 IAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 249 LGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ + APE + G+ S +DI+S+GV++ E+ S
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 91 GRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSD 150
RG FG V++ +L + VAVK + Q +SE E+ ++H+NL++ +
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQSE--REIFSTPGMKHENLLQFIAAEKR 80
Query: 151 GS----QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHED------ 200
GS + L+ + SL + G + W+ + ++RGL YLHED
Sbjct: 81 GSNLEVELWLITAFHDKGSLTDYLKG---NIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 201 --SHTRIVHRDIKASNVLLDEKFQSKIGDFGLA-RFFPEDQAYLSTNFAGTLGYTAPEYA 257
I HRD K+ NVLL + + DFGLA RF P + GT Y APE
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-V 196
Query: 258 IRGELS------EKADIYSFGVLVLEIISCRKNTD 286
+ G ++ + D+Y+ G+++ E++S K D
Sbjct: 197 LEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 25/208 (12%)
Query: 91 GRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSD 150
RG FG V++ +L + VAVK + Q ++E+ EV + ++H+N+++ +G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKR 89
Query: 151 GS----QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHED------ 200
G+ L+ + + SL + ++W+ I +ARGL YLHED
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 201 -SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF-AGTLGYTAPEYAI 258
I HRDIK+ NVLL + I DFGLA F ++ T+ GT Y APE +
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VL 205
Query: 259 RGELS------EKADIYSFGVLVLEIIS 280
G ++ + D+Y+ G+++ E+ S
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 19/212 (8%)
Query: 80 ATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEF-------LSEVR 131
AT + P +G G +G VY+ + G VA+K + V G ++ +R
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 132 MITSIQHKNLVRLLGCCSDGS-----QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
+ + +H N+VRL+ C+ + LV+E++ ++ L + L T +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 125
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
+ RGL +LH + IVHRD+K N+L+ K+ DFGLAR + A T
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL--TPVV 180
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEI 278
TL Y APE ++ + D++S G + E+
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 111/248 (44%), Gaps = 14/248 (5%)
Query: 42 AKELVRLALRTTKEGVSKDFFNGNLRTISYFDFQTLK-----KATKN-FHPGNLLGRGGF 95
K+L + R T E +S F L +I + F K TKN F +LG+GGF
Sbjct: 138 CKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGF 197
Query: 96 GPVYRGKL-ADGTLVAVKKLCVDKSQQ--GESEFLSEVRMITSIQHKNLVRLLGCCSDGS 152
G V ++ A G + A KKL + ++ GE+ L+E +++ + + +V L
Sbjct: 198 GEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD 257
Query: 153 QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKA 212
LV M L IY + I GL+ LH + RIV+RD+K
Sbjct: 258 ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKP 314
Query: 213 SNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFG 272
N+LLD+ +I D GLA PE Q GT+GY APE + D ++ G
Sbjct: 315 ENILLDDHGHIRISDLGLAVHVPEGQTI--KGRVGTVGYMAPEVVKNERYTFSPDWWALG 372
Query: 273 VLVLEIIS 280
L+ E+I+
Sbjct: 373 CLLYEMIA 380
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKS---QQGESEFLS-EVRMITSIQHKNLVRL 144
LG+GGF + AD V K+ V KS + + E +S E+ + S+ H+++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKI-VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF---QIILGIARGLQYLHEDS 201
G D +V E + RSL L ++ R+ QI+LG QYLH +
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGC----QYLHRN- 160
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGE 261
R++HRD+K N+ L+E + KIGDFGLA D GT Y APE +
Sbjct: 161 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKG 217
Query: 262 LSEKADIYSFGVLVLEII--------SCRKNTDLTLPSEMQYLPEY 299
S + D++S G ++ ++ SC K T L + +P++
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 263
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKS---QQGESEFLS-EVRMITSIQHKNLVRL 144
LG+GGF + AD V K+ V KS + + E +S E+ + S+ H+++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKI-VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 104
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF---QIILGIARGLQYLHEDS 201
G D +V E + RSL L ++ R+ QI+LG QYLH +
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGC----QYLHRN- 158
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGE 261
R++HRD+K N+ L+E + KIGDFGLA D GT Y APE +
Sbjct: 159 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKG 215
Query: 262 LSEKADIYSFGVLVLEII--------SCRKNTDLTLPSEMQYLPEY 299
S + D++S G ++ ++ SC K T L + +P++
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 261
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 90 LGRGGFGPVYRGKL---ADG---TLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG FG VY+G L A G VA+K L EF E + +QH N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIY--------GESD------KFLNWSTRFQIILG 189
LLG + +++ Y + L + G +D L ++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR-FFPEDQAYLSTNFAGT 248
IA G++YL S +VH+D+ NVL+ +K KI D GL R + D L N
Sbjct: 137 IAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 249 LGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ + APE + G+ S +DI+S+GV++ E+ S
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 111/248 (44%), Gaps = 14/248 (5%)
Query: 42 AKELVRLALRTTKEGVSKDFFNGNLRTISYFDFQTLK-----KATKN-FHPGNLLGRGGF 95
K+L + R T E +S F L +I + F K TKN F +LG+GGF
Sbjct: 138 CKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGF 197
Query: 96 GPVYRGKL-ADGTLVAVKKLCVDKSQQ--GESEFLSEVRMITSIQHKNLVRLLGCCSDGS 152
G V ++ A G + A KKL + ++ GE+ L+E +++ + + +V L
Sbjct: 198 GEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD 257
Query: 153 QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKA 212
LV M L IY + I GL+ LH + RIV+RD+K
Sbjct: 258 ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKP 314
Query: 213 SNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFG 272
N+LLD+ +I D GLA PE Q GT+GY APE + D ++ G
Sbjct: 315 ENILLDDHGHIRISDLGLAVHVPEGQTI--KGRVGTVGYMAPEVVKNERYTFSPDWWALG 372
Query: 273 VLVLEIIS 280
L+ E+I+
Sbjct: 373 CLLYEMIA 380
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 83 NFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNL 141
+F P LGRGGFG V+ K D A+K++ + + + + EV+ + ++H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 142 VRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGE-----SDKFLNW------------STRF 184
VR + + E ++ S + +Y + + +W S
Sbjct: 66 VRYFNAWLEKN----TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 185 QIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ------ 238
I L IA +++LH ++HRD+K SN+ K+GDFGL +D+
Sbjct: 122 HIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 239 ----AYL-STNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
AY T GT Y +PE S K DI+S G+++ E++
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 20/204 (9%)
Query: 89 LLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+LG+G +G VY G+ L++ +A+K++ S+ + E+ + ++HKN+V+ LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP-LHEEIALHKHLKHKNIVQYLGS 87
Query: 148 CSDGSQRLLVYEYMKNRSLDLLI---YG---ESDKFLNWSTRFQIILGIARGLQYLHEDS 201
S+ + E + SL L+ +G ++++ + + T+ I GL+YLH++
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLHDN- 141
Query: 202 HTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+IVHRDIK NVL++ KI DFG ++ T F GTL Y APE +G
Sbjct: 142 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKG 198
Query: 261 E--LSEKADIYSFGVLVLEIISCR 282
+ ADI+S G ++E+ + +
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKS---QQGESEFLS-EVRMITSIQHKNLVRL 144
LG+GGF + AD V K+ V KS + + E +S E+ + S+ H+++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKI-VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF---QIILGIARGLQYLHEDS 201
G D +V E + RSL L ++ R+ QI+LG QYLH +
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSL-LELHKRRKALTEPEARYYLRQIVLGC----QYLHRN- 134
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGE 261
R++HRD+K N+ L+E + KIGDFGLA D GT Y APE +
Sbjct: 135 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKG 191
Query: 262 LSEKADIYSFGVLVLEII--------SCRKNTDLTLPSEMQYLPEY 299
S + D++S G ++ ++ SC K T L + +P++
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH 237
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 20/204 (9%)
Query: 89 LLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+LG+G +G VY G+ L++ +A+K++ S+ + E+ + ++HKN+V+ LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP-LHEEIALHKHLKHKNIVQYLGS 73
Query: 148 CSDGSQRLLVYEYMKNRSLDLLI---YG---ESDKFLNWSTRFQIILGIARGLQYLHEDS 201
S+ + E + SL L+ +G ++++ + + T+ I GL+YLH++
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLHDN- 127
Query: 202 HTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+IVHRDIK NVL++ KI DFG ++ T F GTL Y APE +G
Sbjct: 128 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKG 184
Query: 261 E--LSEKADIYSFGVLVLEIISCR 282
+ ADI+S G ++E+ + +
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGE----SEFLSEVRMITSIQHKNLVRLL 145
LG G FG V +G +V + + K++ + E L+E ++ + + +VR++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G C + +LV E + L+ Y + ++ + +++ ++ G++YL E +
Sbjct: 79 GIC-EAESWMLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 132
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT--LGYTAPEYAIRGELS 263
VHRD+ A NVLL + +KI DFGL++ D+ G + + APE + S
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 264 EKADIYSFGVLVLEIIS 280
K+D++SFGVL+ E S
Sbjct: 193 SKSDVWSFGVLMWEAFS 209
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 88 NLLGRGGFGPVYRGKLADGTL---VAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVR 143
+++G G FG V + ++ L A+K++ S+ +F E+ ++ + H N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 144 LLGCCSDGSQRLLVYEYM----------KNRSLD----LLIYGESDKFLNWSTRFQIILG 189
LLG C L EY K+R L+ I + L+
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT- 248
+ARG+ YL S + +HRD+ A N+L+ E + +KI DFGL+R + Y+
Sbjct: 151 VARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLP 204
Query: 249 LGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ + A E + +D++S+GVL+ EI+S
Sbjct: 205 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 16/211 (7%)
Query: 77 LKKATKNFHPGNLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEF----LSEVR 131
+K K + + LG G F VY+ + + +VA+KK+ + + + L E++
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 132 MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDL-LIYGESDKFLNWSTRFQIILGI 190
++ + H N++ LL S LV+++M+ DL +I ++ L S +L
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSNISLVFDFMET---DLEVIIKDNSLVLTPSHIKAYMLMT 121
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTL 249
+GL+YLH+ I+HRD+K +N+LLDE K+ DFGLA+ F ++AY T
Sbjct: 122 LQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQ--VVTR 176
Query: 250 GYTAPEYAIRGEL-SEKADIYSFGVLVLEII 279
Y APE + D+++ G ++ E++
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 9/190 (4%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G +G VY+ + G +VA+K++ V+ Q E + E+ ++ ++V+ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ---EIIKEISIMQQCDSPHVVKYYGSY 93
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ +V EY S+ +I +K L I+ +GL+YLH R +HR
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLH---FMRKIHR 149
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
DIKA N+LL+ + +K+ DFG+A + A GT + APE + ADI
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQEIGYNCVADI 208
Query: 269 YSFGVLVLEI 278
+S G+ +E+
Sbjct: 209 WSLGITAIEM 218
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 88 NLLGRGGFGPVYRGKLADGTL---VAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVR 143
+++G G FG V + ++ L A+K++ S+ +F E+ ++ + H N++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 144 LLGCCSDGSQRLLVYEYM----------KNRSLD----LLIYGESDKFLNWSTRFQIILG 189
LLG C L EY K+R L+ I + L+
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT- 248
+ARG+ YL S + +HRD+ A N+L+ E + +KI DFGL+R + Y+
Sbjct: 141 VARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLP 194
Query: 249 LGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ + A E + +D++S+GVL+ EI+S
Sbjct: 195 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 27/214 (12%)
Query: 83 NFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNL 141
+F L+G GGFG V++ K DG +K++ K ++E EV+ + + H N+
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRV---KYNNEKAE--REVKALAKLDHVNI 66
Query: 142 VRLLGC----------CSDGSQR------LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
V GC S S R + E+ +L+ I + L+ +
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 186 IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
+ I +G+ Y+H ++++RD+K SN+ L + Q KIGDFGL D +
Sbjct: 127 LFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK- 182
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
GTL Y +PE + ++ D+Y+ G+++ E++
Sbjct: 183 -GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 11/192 (5%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFL-SEVRMITSIQHKNLVRLLGC 147
+G+G G VY +A G VA++++ + QQ + E + +E+ ++ ++ N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVH 207
G + +V EY+ SL ++ ++ ++ + + L++LH + +++H
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 208 RDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKAD 267
RDIK+ N+LL K+ DFG +Q+ ST GT + APE R K D
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKVD 198
Query: 268 IYSFGVLVLEII 279
I+S G++ +E+I
Sbjct: 199 IWSLGIMAIEMI 210
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 25/208 (12%)
Query: 90 LGRGGFGPVYRGKLADG----TLVAVKKLCVDKSQQGES---------EFLSEVRMITSI 136
LG G +G V K +G + +KK DK + + E +E+ ++ S+
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H N+++L D LV E+ + L I KF + I+ I G+ Y
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KF-DECDAANIMKQILSGICY 161
Query: 197 LHEDSHTRIVHRDIKASNVLLDEK---FQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
LH+ + IVHRDIK N+LL+ K KI DFGL+ FF +D Y + GT Y A
Sbjct: 162 LHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD--YKLRDRLGTAYYIA 216
Query: 254 PEYAIRGELSEKADIYSFGVLVLEIISC 281
PE ++ + +EK D++S GV ++ I+ C
Sbjct: 217 PE-VLKKKYNEKCDVWSCGV-IMYILLC 242
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 114/241 (47%), Gaps = 46/241 (19%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSE--VRMITSIQHKNLVRLL- 145
L+GRG +G VY+G L D VAVK Q F++E + + ++H N+ R +
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN----FINEKNIYRVPLMEHDNIARFIV 74
Query: 146 ---GCCSDGS-QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHED- 200
+DG + LLV EY N SL + + +W + ++ + RGL YLH +
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRGLAYLHTEL 131
Query: 201 ---SHTR--IVHRDIKASNVLLDEKFQSKIGDFGLA---------RFFPEDQAYLSTNFA 246
H + I HRD+ + NVL+ I DFGL+ R ED A +S
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE--V 189
Query: 247 GTLGYTAPEYAIRGELS--------EKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPE 298
GT+ Y APE + G ++ ++ D+Y+ G++ EI + TDL P E +PE
Sbjct: 190 GTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIFM--RCTDL-FPGES--VPE 243
Query: 299 Y 299
Y
Sbjct: 244 Y 244
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 104/233 (44%), Gaps = 19/233 (8%)
Query: 79 KATKNFHPGNLLGRGGFGPVYRGKLADGTLV----AVKKLCVDKSQQGESEFLSEVRMIT 134
+ K + G LG+GGF Y D V V K + K Q E + +E+ +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-KMSTEIAIHK 97
Query: 135 SIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
S+ + ++V G D +V E + RSL L ++ R+ + I +G+
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTI-QGV 155
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
QYLH + R++HRD+K N+ L++ KIGDFGLA D T GT Y AP
Sbjct: 156 QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAP 211
Query: 255 EYAIRGELSEKADIYSFGVLVLEII--------SCRKNTDLTLPSEMQYLPEY 299
E + S + DI+S G ++ ++ SC K T + + +P +
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 104/233 (44%), Gaps = 19/233 (8%)
Query: 79 KATKNFHPGNLLGRGGFGPVYRGKLADGTLV----AVKKLCVDKSQQGESEFLSEVRMIT 134
+ K + G LG+GGF Y D V V K + K Q E + +E+ +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-KMSTEIAIHK 97
Query: 135 SIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
S+ + ++V G D +V E + RSL L ++ R+ + I +G+
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTI-QGV 155
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
QYLH + R++HRD+K N+ L++ KIGDFGLA E + GT Y AP
Sbjct: 156 QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAP 211
Query: 255 EYAIRGELSEKADIYSFGVLVLEII--------SCRKNTDLTLPSEMQYLPEY 299
E + S + DI+S G ++ ++ SC K T + + +P +
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 9/191 (4%)
Query: 90 LGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G G V + + G LVAVKK+ + K Q+ E F +EV ++ QH+N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 217
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
G + +V E+++ +L ++ + +N + L + + L LH ++HR
Sbjct: 218 LVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 271
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
DIK+ ++LL + K+ DFG + GT + APE R + DI
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 330
Query: 269 YSFGVLVLEII 279
+S G++V+E++
Sbjct: 331 WSLGIMVIEMV 341
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 104/233 (44%), Gaps = 19/233 (8%)
Query: 79 KATKNFHPGNLLGRGGFGPVYRGKLADGTLV----AVKKLCVDKSQQGESEFLSEVRMIT 134
+ K + G LG+GGF Y D V V K + K Q E + +E+ +
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-KMSTEIAIHK 81
Query: 135 SIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
S+ + ++V G D +V E + RSL L ++ R+ + I +G+
Sbjct: 82 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTI-QGV 139
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
QYLH + R++HRD+K N+ L++ KIGDFGLA E + GT Y AP
Sbjct: 140 QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAP 195
Query: 255 EYAIRGELSEKADIYSFGVLVLEII--------SCRKNTDLTLPSEMQYLPEY 299
E + S + DI+S G ++ ++ SC K T + + +P +
Sbjct: 196 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 248
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 90 LGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G G V + + G LVAVKK+ + K Q+ E F +EV ++ QH+N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 95
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
G + +V E+++ +L ++ + +N + L + + L LH ++HR
Sbjct: 96 LVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 149
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
DIK+ ++LL + K+ DFG ++ GT + APE R + DI
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDI 208
Query: 269 YSFGVLVLEII 279
+S G++V+E++
Sbjct: 209 WSLGIMVIEMV 219
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 83 NFHPGNLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKS----QQGESEFLSEVRMITSIQ 137
+F ++GRGGFG VY + AD G + A+K C+DK +QGE+ L+E R++ S+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK--CLDKKRIKMKQGETLALNE-RIMLSLV 246
Query: 138 HKNLVRLLGCCSDG----SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF---QIILGI 190
+ C S + + + M L + + F RF +IILG+
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGL 305
Query: 191 ARGLQYLHEDSHTR-IVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL 249
E H R +V+RD+K +N+LLDE +I D GLA F + + + S GT
Sbjct: 306 --------EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTH 354
Query: 250 GYTAPEYAIRG-ELSEKADIYSFGVLVLEII 279
GY APE +G AD +S G ++ +++
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 83 NFHPGNLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKS----QQGESEFLSEVRMITSIQ 137
+F ++GRGGFG VY + AD G + A+K C+DK +QGE+ L+E R++ S+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK--CLDKKRIKMKQGETLALNE-RIMLSLV 246
Query: 138 HKNLVRLLGCCSDG----SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF---QIILGI 190
+ C S + + + M L + + F RF +IILG+
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGL 305
Query: 191 ARGLQYLHEDSHTR-IVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL 249
E H R +V+RD+K +N+LLDE +I D GLA F + + + S GT
Sbjct: 306 --------EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTH 354
Query: 250 GYTAPEYAIRG-ELSEKADIYSFGVLVLEII 279
GY APE +G AD +S G ++ +++
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 83 NFHPGNLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKS----QQGESEFLSEVRMITSIQ 137
+F ++GRGGFG VY + AD G + A+K C+DK +QGE+ L+E R++ S+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK--CLDKKRIKMKQGETLALNE-RIMLSLV 246
Query: 138 HKNLVRLLGCCSDG----SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF---QIILGI 190
+ C S + + + M L + + F RF +IILG+
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGL 305
Query: 191 ARGLQYLHEDSHTR-IVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL 249
E H R +V+RD+K +N+LLDE +I D GLA F + + + S GT
Sbjct: 306 --------EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTH 354
Query: 250 GYTAPEYAIRG-ELSEKADIYSFGVLVLEII 279
GY APE +G AD +S G ++ +++
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 90 LGRGGFGPVYRGK--LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
LG G + VY+GK L D LVA+K++ ++ + + EV ++ ++H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIY-GESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
LV+EY+ DL Y + +N + + RGL Y H +++
Sbjct: 69 IHTEKSLTLVFEYLDK---DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVL 122
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARF--FPEDQAYLSTNFAGTLGYTAPEYAI-RGELS 263
HRD+K N+L++E+ + K+ DFGLAR P + Y N TL Y P+ + + S
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPT-KTY--DNEVVTLWYRPPDILLGSTDYS 179
Query: 264 EKADIYSFGVLVLEIISCR 282
+ D++ G + E+ + R
Sbjct: 180 TQIDMWGVGCIFYEMATGR 198
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 29/211 (13%)
Query: 83 NFHPGNLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKS----QQGESEFLSEVRMITSIQ 137
+F ++GRGGFG VY + AD G + A+K C+DK +QGE+ L+E R++ S+
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK--CLDKKRIKMKQGETLALNE-RIMLSLV 245
Query: 138 HKNLVRLLGCCSDG----SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF---QIILGI 190
+ C S + + + M L + + F RF +IILG+
Sbjct: 246 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGL 304
Query: 191 ARGLQYLHEDSHTR-IVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL 249
E H R +V+RD+K +N+LLDE +I D GLA F + + + S GT
Sbjct: 305 --------EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTH 353
Query: 250 GYTAPEYAIRG-ELSEKADIYSFGVLVLEII 279
GY APE +G AD +S G ++ +++
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 384
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 90 LGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G G V + + G LVAVKK+ + K Q+ E F +EV ++ QH+N+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 97
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
G + +V E+++ +L ++ + +N + L + + L LH ++HR
Sbjct: 98 LVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 151
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
DIK+ ++LL + K+ DFG ++ GT + APE R + DI
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDI 210
Query: 269 YSFGVLVLEII 279
+S G++V+E++
Sbjct: 211 WSLGIMVIEMV 221
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 9/191 (4%)
Query: 90 LGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G G V + + G LVAVKK+ + K Q+ E F +EV ++ QH+N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 140
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
G + +V E+++ +L ++ + +N + L + + L LH ++HR
Sbjct: 141 LVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 194
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
DIK+ ++LL + K+ DFG + GT + APE R + DI
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDI 253
Query: 269 YSFGVLVLEII 279
+S G++V+E++
Sbjct: 254 WSLGIMVIEMV 264
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 43/269 (15%)
Query: 90 LGRGGFGPVYRGKLADG-TLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V++ K + +VA+K++ +D +G S L E+ ++ ++HKN+VRL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIY-----GESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ LV+E+ DL Y G+ D + S FQ++ +GL + H +
Sbjct: 70 LHSDKKLTLVFEFCDQ---DLKKYFDSCNGDLDPEIVKSFLFQLL----KGLGFCHSRN- 121
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGEL 262
++HRD+K N+L++ + K+ DFGLAR F S TL Y P+ +L
Sbjct: 122 --VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKL 178
Query: 263 -SEKADIYSFGVLVLEIISCRK------NTD---------LTLPSEMQY-----LPEY-A 300
S D++S G + E+ + + + D L P+E Q+ LP+Y
Sbjct: 179 YSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238
Query: 301 WKLYERGRILELVDPRMRKEGIVERDALQ 329
+ +Y L V P++ G RD LQ
Sbjct: 239 YPMYPATTSLVNVVPKLNATG---RDLLQ 264
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 19/233 (8%)
Query: 79 KATKNFHPGNLLGRGGFGPVYRGKLADGTLV----AVKKLCVDKSQQGESEFLSEVRMIT 134
+ K + G LG+GGF Y D V V K + K Q E + +E+ +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-KMSTEIAIHK 97
Query: 135 SIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
S+ + ++V G D +V E + RSL L ++ R+ + I +G+
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYFMRQTI-QGV 155
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
QYLH + R++HRD+K N+ L++ KIGDFGLA E GT Y AP
Sbjct: 156 QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKXLCGTPNYIAP 211
Query: 255 EYAIRGELSEKADIYSFGVLVLEII--------SCRKNTDLTLPSEMQYLPEY 299
E + S + DI+S G ++ ++ SC K T + + +P +
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH 264
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 88 NLLGRGGFGPVYRGKLADGTL---VAVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVR 143
+++G G FG V + ++ L A+K++ S+ +F E+ ++ + H N++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 144 LLGCCSDGSQRLLVYEYM----------KNRSLD----LLIYGESDKFLNWSTRFQIILG 189
LLG C L EY K+R L+ I + L+
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT- 248
+ARG+ YL S + +HR++ A N+L+ E + +KI DFGL+R + Y+
Sbjct: 148 VARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRLP 201
Query: 249 LGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ + A E + +D++S+GVL+ EI+S
Sbjct: 202 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 90 LGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G G V + + G LVAVKK+ + K Q+ E F +EV ++ QH+N+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 86
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
G + +V E+++ +L ++ + +N + L + + L LH ++HR
Sbjct: 87 LVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 140
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
DIK+ ++LL + K+ DFG ++ GT + APE R + DI
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDI 199
Query: 269 YSFGVLVLEII 279
+S G++V+E++
Sbjct: 200 WSLGIMVIEMV 210
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFL-SEVRMITSIQHKNLVRLLGC 147
+G+G G VY +A G VA++++ + QQ + E + +E+ ++ ++ N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVH 207
G + +V EY+ SL ++ ++ ++ + + L++LH + +++H
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 208 RDIKASNVLLDEKFQSKIGDFGL-ARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKA 266
RDIK+ N+LL K+ DFG A+ PE + GT + APE R K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 267 DIYSFGVLVLEII 279
DI+S G++ +E+I
Sbjct: 198 DIWSLGIMAIEMI 210
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 23/203 (11%)
Query: 89 LLGRGGFGPVYRGKL----ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
+LG G FG VY G + VAVK D + + +F+SE ++ ++ H ++V+L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWS-------TRFQIILGIARGLQYL 197
+G + ++ ++L YGE +L + T L I + + YL
Sbjct: 75 IGIIEEEPTWII---------MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 125
Query: 198 HEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYA 257
VHRDI N+L+ K+GDFGL+R+ ++ Y ++ + + +PE
Sbjct: 126 ES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 182
Query: 258 IRGELSEKADIYSFGVLVLEIIS 280
+ +D++ F V + EI+S
Sbjct: 183 NFRRFTTASDVWMFAVCMWEILS 205
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 108/212 (50%), Gaps = 27/212 (12%)
Query: 90 LGRGGFGPVYRGK---LAD--GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
LG+G FG V + L D G LVAVK+L Q + +F E++++ ++ +V+
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ-QRDFQREIQILKALHSDFIVKY 73
Query: 145 LGCCSDGSQR---LLVYEYMKNRSL-DLLIYG----ESDKFLNWSTRFQIILGIARGLQY 196
G S G R LV EY+ + L D L ++ + L +S++ I +G++Y
Sbjct: 74 RGV-SYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEY 126
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG--TLGYTAP 254
L R VHRD+ A N+L++ + KI DFGLA+ P D+ G + + AP
Sbjct: 127 L---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAP 183
Query: 255 EYAIRGELSEKADIYSFGVLVLEIIS-CRKNT 285
E S ++D++SFGV++ E+ + C K+
Sbjct: 184 ESLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 90 LGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G G V + + G LVAVKK+ + K Q+ E F +EV ++ QH+N+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 90
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
G + +V E+++ +L ++ + +N + L + + L LH ++HR
Sbjct: 91 LVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 144
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
DIK+ ++LL + K+ DFG ++ GT + APE R + DI
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDI 203
Query: 269 YSFGVLVLEII 279
+S G++V+E++
Sbjct: 204 WSLGIMVIEMV 214
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 89 LLGRGGFGPVYRGKLADGT-------LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNL 141
+LG+GG+G V++ + G + +KK + ++ + + +E ++ ++H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 142 VRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDS 201
V L+ G + L+ EY+ +L + E + T + I+ L +LH+
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGG--ELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGE 261
I++RD+K N++L+ + K+ DFGL + D T F GT+ Y APE +R
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT-FCGTIEYMAPEILMRSG 197
Query: 262 LSEKADIYSFGVLVLEIIS 280
+ D +S G L+ ++++
Sbjct: 198 HNRAVDWWSLGALMYDMLT 216
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 27/225 (12%)
Query: 85 HPGNL-----LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGES---EFLSEVRMITS 135
H GN +G+G F V + + G VA+K +DK+Q + + EVR++
Sbjct: 10 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIK--IIDKTQLNPTSLQKLFREVRIMKI 67
Query: 136 IQHKNLVRLLGCCSDGSQRLLVYEYMKN-RSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
+ H N+V+L L+ EY D L+ K ++F+ I+ +
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS---AV 124
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
QY H+ RIVHRD+KA N+LLD KI DFG + F L T F G+ Y AP
Sbjct: 125 QYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKLDT-FCGSPPYAAP 179
Query: 255 E-YAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPE 298
E + + + D++S GV++ ++S +LP + Q L E
Sbjct: 180 ELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 218
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 40/227 (17%)
Query: 83 NFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNL 141
+F L+G GGFG V++ K DG ++++ K ++E EV+ + + H N+
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRV---KYNNEKAE--REVKALAKLDHVNI 67
Query: 142 VRLLGCC-----------------------SDGSQR------LLVYEYMKNRSLDLLIYG 172
V GC S S R + E+ +L+ I
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 173 ESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR 232
+ L+ ++ I +G+ Y+H +++HRD+K SN+ L + Q KIGDFGL
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVT 184
Query: 233 FFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
D T GTL Y +PE + ++ D+Y+ G+++ E++
Sbjct: 185 SLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFL-SEVRMITSIQHKNLVRLLGC 147
+G+G G VY +A G VA++++ + QQ + E + +E+ ++ ++ N+V L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVH 207
G + +V EY+ SL ++ ++ ++ + + L++LH + +++H
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 208 RDIKASNVLLDEKFQSKIGDFGL-ARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKA 266
RDIK+ N+LL K+ DFG A+ PE + GT + APE R K
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 267 DIYSFGVLVLEII 279
DI+S G++ +E+I
Sbjct: 199 DIWSLGIMAIEMI 211
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 11/192 (5%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFL-SEVRMITSIQHKNLVRLLGC 147
+G+G G VY +A G VA++++ + QQ + E + +E+ ++ ++ N+V L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVH 207
G + +V EY+ SL ++ ++ ++ + + L++LH + +++H
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 208 RDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKAD 267
R+IK+ N+LL K+ DFG +Q+ ST GT + APE R K D
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKVD 199
Query: 268 IYSFGVLVLEII 279
I+S G++ +E+I
Sbjct: 200 IWSLGIMAIEMI 211
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 23/203 (11%)
Query: 89 LLGRGGFGPVYRGKL----ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
+LG G FG VY G + VAVK D + + +F+SE ++ ++ H ++V+L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWS-------TRFQIILGIARGLQYL 197
+G + ++ ++L YGE +L + T L I + + YL
Sbjct: 91 IGIIEEEPTWII---------MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 141
Query: 198 HEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYA 257
VHRDI N+L+ K+GDFGL+R+ ++ Y ++ + + +PE
Sbjct: 142 ES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 198
Query: 258 IRGELSEKADIYSFGVLVLEIIS 280
+ +D++ F V + EI+S
Sbjct: 199 NFRRFTTASDVWMFAVCMWEILS 221
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFL-SEVRMITSIQHKNLVRLLGC 147
+G+G G VY +A G VA++++ + QQ + E + +E+ ++ ++ N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVH 207
G + +V EY+ SL ++ ++ ++ + + L++LH + +++H
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 208 RDIKASNVLLDEKFQSKIGDFGL-ARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKA 266
RDIK+ N+LL K+ DFG A+ PE + GT + APE R K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 267 DIYSFGVLVLEII 279
DI+S G++ +E+I
Sbjct: 198 DIWSLGIMAIEMI 210
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 82 KNFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQ-GESEFLSEVRMITSIQHK 139
K F +LG G F V+ K G L A+K C+ KS +S +E+ ++ I+H+
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALK--CIKKSPAFRDSSLENEIAVLKKIKHE 66
Query: 140 NLVRLLGCCSDGSQRLLVYEYMK-----NRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N+V L + LV + + +R L+ +Y E D L +I + +
Sbjct: 67 NIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-------VIQQVLSAV 119
Query: 195 QYLHEDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGY 251
+YLHE+ IVHRD+K N+L +E + I DFGL++ E +ST GT GY
Sbjct: 120 KYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTA-CGTPGY 173
Query: 252 TAPEYAIRGELSEKADIYSFGVLVLEIISC 281
APE + S+ D +S GV+ I+ C
Sbjct: 174 VAPEVLAQKPYSKAVDCWSIGVITY-ILLC 202
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 186 EPVDVWSCGIVLTAMLA 202
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 89 LLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGE-SEFLSEVRMITSIQHKNLVRLLG 146
+LG+G FG V + K AVK + ++ + S L EV ++ + H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 147 CCSDGSQRLLVYE-YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
D S +V E Y D +I K + +II + G+ Y+H+ + I
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEII---KRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 206 VHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGEL 262
VHRD+K N+LL+ K + KI DFGL+ F ++ + GT Y APE +RG
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM--KDRIGTAYYIAPE-VLRGTY 199
Query: 263 SEKADIYSFGVLVLEIIS 280
EK D++S GV++ ++S
Sbjct: 200 DEKCDVWSAGVILYILLS 217
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 23/203 (11%)
Query: 89 LLGRGGFGPVYRGKL----ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
+LG G FG VY G + VAVK D + + +F+SE ++ ++ H ++V+L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWS-------TRFQIILGIARGLQYL 197
+G + ++ ++L YGE +L + T L I + + YL
Sbjct: 79 IGIIEEEPTWII---------MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 129
Query: 198 HEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYA 257
VHRDI N+L+ K+GDFGL+R+ ++ Y ++ + + +PE
Sbjct: 130 ES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 186
Query: 258 IRGELSEKADIYSFGVLVLEIIS 280
+ +D++ F V + EI+S
Sbjct: 187 NFRRFTTASDVWMFAVCMWEILS 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 85 HPGNL-----LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGES---EFLSEVRMITS 135
H GN +G+G F V + + G VAVK +DK+Q S + EVR++
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK--IIDKTQLNSSSLQKLFREVRIMKV 69
Query: 136 IQHKNLVRLLGCCSDGSQRLLVYEYMKN-RSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
+ H N+V+L LV EY D L+ K +F+ I+ +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AV 126
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
QY H+ IVHRD+KA N+LLD KI DFG + F L T F G+ Y AP
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDT-FCGSPPYAAP 181
Query: 255 E-YAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPE 298
E + + + D++S GV++ ++S +LP + Q L E
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 103/227 (45%), Gaps = 27/227 (11%)
Query: 83 NFHPGNL-----LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGES---EFLSEVRMI 133
+ H GN +G+G F V + + G VAVK +DK+Q S + EVR++
Sbjct: 3 DLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK--IIDKTQLNSSSLQKLFREVRIM 60
Query: 134 TSIQHKNLVRLLGCCSDGSQRLLVYEYMKN-RSLDLLIYGESDKFLNWSTRFQIILGIAR 192
+ H N+V+L LV EY D L+ K +F+ I
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR---QIVS 117
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
+QY H+ IVHRD+KA N+LLD KI DFG + F L T F G+ Y
Sbjct: 118 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDT-FCGSPPYA 172
Query: 253 APE-YAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPE 298
APE + + + D++S GV++ ++S +LP + Q L E
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 213
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 85 HPGNL-----LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGES---EFLSEVRMITS 135
H GN +G+G F V + + G VAVK +DK+Q S + EVR++
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK--IIDKTQLNSSSLQKLFREVRIMKV 69
Query: 136 IQHKNLVRLLGCCSDGSQRLLVYEYMKN-RSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
+ H N+V+L LV EY D L+ K +F+ I+ +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AV 126
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
QY H+ IVHRD+KA N+LLD KI DFG + F L T F G+ Y AP
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDT-FCGSPPYAAP 181
Query: 255 E-YAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPE 298
E + + + D++S GV++ ++S +LP + Q L E
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 186
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 187 EPVDVWSCGIVLTAMLA 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 186 EPVDVWSCGIVLTAMLA 202
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 13/212 (6%)
Query: 75 QTLKKATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEV 130
Q KK ++F G +LG G F V + LA A+K L +K ++ + +++
Sbjct: 3 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRE 60
Query: 131 RMITS-IQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG 189
R + S + H V+L D + Y KN L L + F TRF
Sbjct: 61 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-E 118
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGT 248
I L+YLH I+HRD+K N+LL+E +I DFG A+ PE + + F GT
Sbjct: 119 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 249 LGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
Y +PE + +D+++ G ++ ++++
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 207
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 87 GNLLGRGGFGPVYRGKLAD----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
G +G G FG V++G VA+K S +FL E + H ++V
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--------IARGL 194
+L+G ++ ++ ++L GE FL +F + L ++ L
Sbjct: 75 KLIGVITENPVWII---------MELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTAL 124
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
YL R VHRDI A NVL+ K+GDFGL+R+ + Y ++ + + AP
Sbjct: 125 AYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 255 EYAIRGELSEKADIYSFGVLVLEII 279
E + +D++ FGV + EI+
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 89 LLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGE-SEFLSEVRMITSIQHKNLVRLLG 146
+LG+G FG V + K AVK + ++ + S L EV ++ + H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 147 CCSDGSQRLLVYE-YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
D S +V E Y D +I K + +II + G+ Y+H+ + I
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEII---KRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 206 VHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGEL 262
VHRD+K N+LL+ K + KI DFGL+ F ++ + GT Y APE +RG
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM--KDRIGTAYYIAPE-VLRGTY 199
Query: 263 SEKADIYSFGVLVLEIIS 280
EK D++S GV++ ++S
Sbjct: 200 DEKCDVWSAGVILYILLS 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 98/199 (49%), Gaps = 13/199 (6%)
Query: 89 LLGRGGFGPVYRGKLADGT-------LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNL 141
+LG+GG+G V++ + G + +KK + ++ + + +E ++ ++H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 142 VRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDS 201
V L+ G + L+ EY+ +L + E + T + I+ L +LH+
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGG--ELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGE 261
I++RD+K N++L+ + K+ DFGL + D ++ F GT+ Y APE +R
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD-GTVTHXFCGTIEYMAPEILMRSG 197
Query: 262 LSEKADIYSFGVLVLEIIS 280
+ D +S G L+ ++++
Sbjct: 198 HNRAVDWWSLGALMYDMLT 216
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V + LA A+K L +K ++ + +++ R + S +
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 94
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L C D + Y KN L L + F TRF I L+Y
Sbjct: 95 DHPFFVKLYFCFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 152
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + F GT Y +PE
Sbjct: 153 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ +D+++ G ++ ++++
Sbjct: 210 LLTEKSACKSSDLWALGCIIYQLVA 234
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 96/192 (50%), Gaps = 12/192 (6%)
Query: 90 LGRGGFGPVYR-GKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G FG V+ + + G +K + D+SQ + +E+ ++ S+ H N++++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 149 SDGSQRLLVYEYMKNRS-LDLLIYGES-DKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
D +V E + L+ ++ ++ K L+ +++ + L Y H +V
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVV 146
Query: 207 HRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELS 263
H+D+K N+L + KI DFGLA F D+ STN AGT Y APE + +++
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPE-VFKRDVT 203
Query: 264 EKADIYSFGVLV 275
K DI+S GV++
Sbjct: 204 FKCDIWSAGVVM 215
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 13/212 (6%)
Query: 75 QTLKKATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEV 130
Q KK ++F G +LG G F V + LA A+K L +K ++ + +++
Sbjct: 2 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRE 59
Query: 131 RMITS-IQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG 189
R + S + H V+L D + Y KN L L + F TRF
Sbjct: 60 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-E 117
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGT 248
I L+YLH I+HRD+K N+LL+E +I DFG A+ PE + + F GT
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 249 LGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
Y +PE + +D+++ G ++ ++++
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 206
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 15/198 (7%)
Query: 89 LLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGE-SEFLSEVRMITSIQHKNLVRLLG 146
+LG+G FG V + K AVK + ++ + S L EV ++ + H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 147 CCSDGSQRLLVYE-YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
D S +V E Y D +I K + +II + G+ Y+H+ + I
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEII---KRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 206 VHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGEL 262
VHRD+K N+LL+ K + KI DFGL+ F ++ + GT Y APE +RG
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM--KDRIGTAYYIAPE-VLRGTY 199
Query: 263 SEKADIYSFGVLVLEIIS 280
EK D++S GV++ ++S
Sbjct: 200 DEKCDVWSAGVILYILLS 217
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 187 EPVDVWSCGIVLTAMLA 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 186 EPVDVWSCGIVLTAMLA 202
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 13 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 70 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 124
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 185 EPVDVWSCGIVLTAMLA 201
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 187 EPVDVWSCGIVLTAMLA 203
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 187 EPVDVWSCGIVLTAMLA 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 187 EPVDVWSCGIVLTAMLA 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 187 EPVDVWSCGIVLTAMLA 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 98/212 (46%), Gaps = 14/212 (6%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 264 EKADIYSFGVLVLEIISCRKNTDLTLPSEMQY 295
E D++S G+++ +++ D S +Y
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSXQEY 217
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 13/212 (6%)
Query: 75 QTLKKATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEV 130
Q KK ++F G +LG G F V + LA A+K L +K ++ + +++
Sbjct: 1 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRE 58
Query: 131 RMITS-IQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG 189
R + S + H V+L D + Y KN L L + F TRF
Sbjct: 59 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-E 116
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGT 248
I L+YLH I+HRD+K N+LL+E +I DFG A+ PE + + F GT
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 249 LGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
Y +PE + +D+++ G ++ ++++
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 205
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 187 EPVDVWSCGIVLTAMLA 203
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 87 GNLLGRGGFGPVYRGKLAD----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
G +G G FG V++G VA+K S +FL E + H ++V
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--------IARGL 194
+L+G ++ ++ ++L GE FL +F + L ++ L
Sbjct: 455 KLIGVITENPVWII---------MELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTAL 504
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
YL R VHRDI A NVL+ K+GDFGL+R+ + Y ++ + + AP
Sbjct: 505 AYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 255 EYAIRGELSEKADIYSFGVLVLEII 279
E + +D++ FGV + EI+
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 186 EPVDVWSCGIVLTAMLA 202
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 186 EPVDVWSCGIVLTAMLA 202
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 186 EPVDVWSCGIVLTAMLA 202
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 187 EPVDVWSCGIVLTAMLA 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 186 EPVDVWSCGIVLTAMLA 202
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 186 EPVDVWSCGIVLTAMLA 202
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 186 EPVDVWSCGIVLTAMLA 202
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 85 HPGNL-----LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGES---EFLSEVRMITS 135
H GN +G+G F V + + G VAV+ +DK+Q S + EVR++
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVR--IIDKTQLNSSSLQKLFREVRIMKV 69
Query: 136 IQHKNLVRLLGCCSDGSQRLLVYEYMKN-RSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
+ H N+V+L LV EY D L+ K +F+ I+ +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AV 126
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
QY H+ IVHRD+KA N+LLD KI DFG + F L T F G+ Y AP
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDT-FCGSPPYAAP 181
Query: 255 E-YAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPE 298
E + + + D++S GV++ ++S +LP + Q L E
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 27/225 (12%)
Query: 85 HPGNL-----LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGES---EFLSEVRMITS 135
H GN +G+G F V + + G VA+K +DK+Q + + EVR++
Sbjct: 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIK--IIDKTQLNPTSLQKLFREVRIMKI 70
Query: 136 IQHKNLVRLLGCCSDGSQRLLVYEYMKN-RSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
+ H N+V+L L+ EY D L+ K ++F+ I+ +
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS---AV 127
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
QY H+ RIVHRD+KA N+LLD KI DFG + F F G Y AP
Sbjct: 128 QYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL--DAFCGAPPYAAP 182
Query: 255 E-YAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPE 298
E + + + D++S GV++ ++S +LP + Q L E
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 221
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 87 GNLLGRGGFGPVYRGKLAD----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
G +G G FG V++G VA+K S +FL E + H ++V
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--------IARGL 194
+L+G ++ ++ ++L GE FL +F + L ++ L
Sbjct: 455 KLIGVITENPVWII---------MELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTAL 504
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
YL R VHRDI A NVL+ K+GDFGL+R+ + Y ++ + + AP
Sbjct: 505 AYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 255 EYAIRGELSEKADIYSFGVLVLEII 279
E + +D++ FGV + EI+
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 87 GNLLGRGGFGPVYRGKLAD----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
G +G G FG V++G VA+K S +FL E + H ++V
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--------IARGL 194
+L+G ++ ++ ++L GE FL ++ + L ++ L
Sbjct: 75 KLIGVITENPVWII---------MELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTAL 124
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
YL R VHRDI A NVL+ K+GDFGL+R+ + Y ++ + + AP
Sbjct: 125 AYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 255 EYAIRGELSEKADIYSFGVLVLEII 279
E + +D++ FGV + EI+
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 78 KKATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMI 133
KK ++F G +LG G F V + LA A+K L +K ++ + +++ R +
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDV 60
Query: 134 TS-IQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR 192
S + H V+L D + Y KN L L + F TRF I
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVS 118
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGY 251
L+YLH I+HRD+K N+LL+E +I DFG A+ PE + + F GT Y
Sbjct: 119 ALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 252 TAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+PE + +D+++ G ++ ++++
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVA 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 186 EPVDVWSCGIVLTAMLA 202
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 100/225 (44%), Gaps = 27/225 (12%)
Query: 85 HPGNL-----LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGES---EFLSEVRMITS 135
H GN +G+G F V + + G VAVK +DK+Q S + EVR++
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK--IIDKTQLNSSSLQKLFREVRIMKV 69
Query: 136 IQHKNLVRLLGCCSDGSQRLLVYEYMKN-RSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
+ H N+V+L LV EY D L+ K +F+ I+ +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AV 126
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
QY H+ IVHRD+KA N+LLD KI DFG + F F G Y AP
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL--DAFCGAPPYAAP 181
Query: 255 E-YAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPE 298
E + + + D++S GV++ ++S +LP + Q L E
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 10/207 (4%)
Query: 77 LKKATKNFHPGNLLGRGGFGPVYRGKLADGT----LVAVKKLCVDKSQQGESEFLSEVRM 132
+K ++F +LG+G FG V+ + + A+KK V E + + +
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 72
Query: 133 ITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR 192
+ +H L + V EY+ DL+ + +S + S I
Sbjct: 73 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGG--DLMYHIQSCHKFDLSRATFYAAEIIL 130
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
GLQ+LH IV+RD+K N+LLD+ KI DFG+ + A + F GT Y
Sbjct: 131 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGTPDYI 186
Query: 253 APEYAIRGELSEKADIYSFGVLVLEII 279
APE + + + D +SFGVL+ E++
Sbjct: 187 APEILLGQKYNHSVDWWSFGVLLYEML 213
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 102/222 (45%), Gaps = 22/222 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGES---EFLSEVRMITSIQH 138
N+ +G+G F V + + G VAVK +DK+Q + + EVR++ + H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVK--IIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKN-RSLDLLIYGESDKFLNWSTRFQIILGIARGLQYL 197
N+V+L LV EY D L+ K +F+ I+ +QY
Sbjct: 74 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYC 130
Query: 198 HEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPE-Y 256
H+ IVHRD+KA N+LLD KI DFG + F L T F G+ Y APE +
Sbjct: 131 HQ---KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK-LDT-FCGSPPYAAPELF 185
Query: 257 AIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPE 298
+ + D++S GV++ ++S +LP + Q L E
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 221
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Query: 90 LGRGGFGPVYRGKL-ADGTLVAVKKL--CVDKSQQGESEFLSEVRMITSIQHKNLVRL-- 144
+G G +G V + G VA+KK+ D + L E++++ +H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT-LRELKILKHFKHDNIIAIKD 121
Query: 145 -LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
L + VY + DL S + L + + RGL+Y+H
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS---A 178
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFF---PEDQAYLSTNFAGTLGYTAPEYAIR- 259
+++HRD+K SN+L++E + KIGDFG+AR P + Y T + T Y APE +
Sbjct: 179 QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 238
Query: 260 GELSEKADIYSFGVLVLEIISCRK 283
E ++ D++S G + E+++ R+
Sbjct: 239 HEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 87 GNLLGRGGFGPVYRGKLAD----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
G +G G FG V++G VA+K S +FL E + H ++V
Sbjct: 43 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 102
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFL-------NWSTRFQIILGIARGLQ 195
+L+G ++ ++ ++L GE FL + ++ ++ L
Sbjct: 103 KLIGVITENPVWII---------MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 153
Query: 196 YLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPE 255
YL R VHRDI A NVL+ K+GDFGL+R+ + Y ++ + + APE
Sbjct: 154 YLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 210
Query: 256 YAIRGELSEKADIYSFGVLVLEII 279
+ +D++ FGV + EI+
Sbjct: 211 SINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 27/225 (12%)
Query: 85 HPGNL-----LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGES---EFLSEVRMITS 135
H GN +G+G F V + + G VAV+ +DK+Q S + EVR++
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVR--IIDKTQLNSSSLQKLFREVRIMKV 69
Query: 136 IQHKNLVRLLGCCSDGSQRLLVYEYMKN-RSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
+ H N+V+L LV EY D L+ K +F+ I+ +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AV 126
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
QY H+ IVHRD+KA N+LLD KI DFG + F F G+ Y AP
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL--DEFCGSPPYAAP 181
Query: 255 E-YAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPE 298
E + + + D++S GV++ ++S +LP + Q L E
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 87 GNLLGRGGFGPVYRGKLAD----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
G +G G FG V++G VA+K S +FL E + H ++V
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--------IARGL 194
+L+G ++ ++ ++L GE FL ++ + L ++ L
Sbjct: 75 KLIGVITENPVWII---------MELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTAL 124
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
YL R VHRDI A NVL+ K+GDFGL+R+ + Y ++ + + AP
Sbjct: 125 AYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 255 EYAIRGELSEKADIYSFGVLVLEII 279
E + +D++ FGV + EI+
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 87 GNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGE--SEFLSEVRMITSIQHKNLVR 143
G+ LG G FG V GK G VAVK L K + + + E++ + +H ++++
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
L S S +V EY+ +L Y + L+ ++ I G+ Y H
Sbjct: 81 LYQVISTPSDIFMVMEYVSGG--ELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM-- 136
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGEL- 262
+VHRD+K NVLLD +KI DFGL+ D +L + G+ Y APE I G L
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRXS-CGSPNYAAPE-VISGRLY 192
Query: 263 -SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLP 297
+ DI+S GV++ ++ TLP + ++P
Sbjct: 193 AGPEVDIWSSGVILYALLCG------TLPFDDDHVP 222
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 87 GNLLGRGGFGPVYRGKLAD----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
G +G G FG V++G VA+K S +FL E + H ++V
Sbjct: 17 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 76
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--------IARGL 194
+L+G ++ ++ ++L GE FL ++ + L ++ L
Sbjct: 77 KLIGVITENPVWII---------MELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTAL 126
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
YL R VHRDI A NVL+ K+GDFGL+R+ + Y ++ + + AP
Sbjct: 127 AYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 183
Query: 255 EYAIRGELSEKADIYSFGVLVLEII 279
E + +D++ FGV + EI+
Sbjct: 184 ESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 87 GNLLGRGGFGPVYRGKLAD----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
G +G G FG V++G VA+K S +FL E + H ++V
Sbjct: 12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 71
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--------IARGL 194
+L+G ++ ++ ++L GE FL ++ + L ++ L
Sbjct: 72 KLIGVITENPVWII---------MELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTAL 121
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
YL R VHRDI A NVL+ K+GDFGL+R+ + Y ++ + + AP
Sbjct: 122 AYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 178
Query: 255 EYAIRGELSEKADIYSFGVLVLEII 279
E + +D++ FGV + EI+
Sbjct: 179 ESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Query: 90 LGRGGFGPVYRGKL-ADGTLVAVKKL--CVDKSQQGESEFLSEVRMITSIQHKNLVRL-- 144
+G G +G V + G VA+KK+ D + L E++++ +H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT-LRELKILKHFKHDNIIAIKD 120
Query: 145 -LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
L + VY + DL S + L + + RGL+Y+H
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS---A 177
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFF---PEDQAYLSTNFAGTLGYTAPEYAIR- 259
+++HRD+K SN+L++E + KIGDFG+AR P + Y T + T Y APE +
Sbjct: 178 QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 237
Query: 260 GELSEKADIYSFGVLVLEIISCRK 283
E ++ D++S G + E+++ R+
Sbjct: 238 HEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 43/269 (15%)
Query: 90 LGRGGFGPVYRGKLADG-TLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V++ K + +VA+K++ +D +G S L E+ ++ ++HKN+VRL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIY-----GESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ LV+E+ DL Y G+ D + S FQ++ +GL + H +
Sbjct: 70 LHSDKKLTLVFEFCDQ---DLKKYFDSCNGDLDPEIVKSFLFQLL----KGLGFCHSRN- 121
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGEL 262
++HRD+K N+L++ + K+ +FGLAR F S TL Y P+ +L
Sbjct: 122 --VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKL 178
Query: 263 -SEKADIYSFGVLVLEIISCRK------NTD---------LTLPSEMQY-----LPEY-A 300
S D++S G + E+ + + + D L P+E Q+ LP+Y
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238
Query: 301 WKLYERGRILELVDPRMRKEGIVERDALQ 329
+ +Y L V P++ G RD LQ
Sbjct: 239 YPMYPATTSLVNVVPKLNATG---RDLLQ 264
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 87 GNLLGRGGFGPVYRGKLAD----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
G +G G FG V++G VA+K S +FL E + H ++V
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 79
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--------IARGL 194
+L+G ++ ++ ++L GE FL ++ + L ++ L
Sbjct: 80 KLIGVITENPVWII---------MELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTAL 129
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
YL R VHRDI A NVL+ K+GDFGL+R+ + Y ++ + + AP
Sbjct: 130 AYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 186
Query: 255 EYAIRGELSEKADIYSFGVLVLEII 279
E + +D++ FGV + EI+
Sbjct: 187 ESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 87 GNLLGRGGFGPVYRGKLAD----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
G +G G FG V++G VA+K S +FL E + H ++V
Sbjct: 18 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 77
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--------IARGL 194
+L+G ++ ++ ++L GE FL ++ + L ++ L
Sbjct: 78 KLIGVITENPVWII---------MELCTLGELRSFLQ-VRKYSLDLASLILYAYQLSTAL 127
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
YL R VHRDI A NVL+ K+GDFGL+R+ + Y ++ + + AP
Sbjct: 128 AYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 184
Query: 255 EYAIRGELSEKADIYSFGVLVLEII 279
E + +D++ FGV + EI+
Sbjct: 185 ESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 32/221 (14%)
Query: 70 SYFDFQTLKKATKNFHPGNLLGRGGFGPVYR------GKLADGTLVAVKKLCVDKSQQGE 123
S F K + N+ LG+G F V R G ++ KKL Q+ E
Sbjct: 17 SEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE 76
Query: 124 SEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGE------SDKF 177
E R+ +QH N+VRL + S LV+ DL+ GE + +F
Sbjct: 77 RE----ARICRKLQHPNIVRLHDSIQEESFHYLVF--------DLVTGGELFEDIVAREF 124
Query: 178 LNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQS---KIGDFGLARFF 234
+ + I I + Y H + IVHR++K N+LL K + K+ DFGLA
Sbjct: 125 YSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181
Query: 235 PEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLV 275
+ +A+ FAGT GY +PE + S+ DI++ GV++
Sbjct: 182 NDSEAW--HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 25/207 (12%)
Query: 83 NFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQ---QG-ESEFLSEVRMITSIQH 138
+F G LG+G FG VY + + K+ KSQ +G E + E+ + + ++H
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLF-KSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ------IILGIAR 192
N++R+ D + L+ E+ GE K L RF + +A
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPR--------GELYKELQKHGRFDEQRSATFMEELAD 126
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
L Y HE +++HRDIK N+L+ K + KI DFG + P + GTL Y
Sbjct: 127 ALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYL 180
Query: 253 APEYAIRGELSEKADIYSFGVLVLEII 279
PE EK D++ GVL E +
Sbjct: 181 PPEMIEGKTHDEKVDLWCAGVLCYEFL 207
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
Query: 106 GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRS 165
G VAVKK+ + K Q+ E F +EV ++ H N+V + G + +V E+++ +
Sbjct: 70 GKQVAVKKMDLRKQQRRELLF-NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGA 128
Query: 166 LDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKI 225
L ++ + +N + L + R L YLH ++HRDIK+ ++LL + K+
Sbjct: 129 LTDIV---THTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKL 182
Query: 226 GDFG----LARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
DFG +++ P+ + + T + + APE R + DI+S G++V+E+I
Sbjct: 183 SDFGFCAQVSKEVPKRKXLVGTPY-----WMAPEVISRLPYGTEVDIWSLGIMVIEMI 235
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 25/207 (12%)
Query: 83 NFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQ---QG-ESEFLSEVRMITSIQH 138
+F G LG+G FG VY + + K+ KSQ +G E + E+ + + ++H
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLF-KSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ------IILGIAR 192
N++R+ D + L+ E+ GE K L RF + +A
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPR--------GELYKELQKHGRFDEQRSATFMEELAD 125
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
L Y HE +++HRDIK N+L+ K + KI DFG + P + GTL Y
Sbjct: 126 ALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYL 179
Query: 253 APEYAIRGELSEKADIYSFGVLVLEII 279
PE EK D++ GVL E +
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFL 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V + LA A+K L +K ++ + +++ R + S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L D + Y KN L L + F TRF I L+Y
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGCL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 147
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + +F GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
S+ +D+++ G ++ ++++
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVA 229
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 100/225 (44%), Gaps = 27/225 (12%)
Query: 85 HPGNL-----LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGES---EFLSEVRMITS 135
H GN +G+G F V + + G VAVK +DK+Q S + EVR+
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK--IIDKTQLNSSSLQKLFREVRIXKV 69
Query: 136 IQHKNLVRLLGCCSDGSQRLLVYEYMKN-RSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
+ H N+V+L LV EY D L+ K +F+ I+ +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS---AV 126
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
QY H+ IVHRD+KA N+LLD KI DFG + F + F G Y AP
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA--FCGAPPYAAP 181
Query: 255 E-YAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPE 298
E + + + D++S GV++ ++S +LP + Q L E
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 10/207 (4%)
Query: 77 LKKATKNFHPGNLLGRGGFGPVYRGKLADGT----LVAVKKLCVDKSQQGESEFLSEVRM 132
+K ++F +LG+G FG V+ + + A+KK V E + + +
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 71
Query: 133 ITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIAR 192
+ +H L + V EY+ DL+ + +S + S I
Sbjct: 72 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGG--DLMYHIQSCHKFDLSRATFYAAEIIL 129
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
GLQ+LH IV+RD+K N+LLD+ KI DFG+ + A + F GT Y
Sbjct: 130 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGTPDYI 185
Query: 253 APEYAIRGELSEKADIYSFGVLVLEII 279
APE + + + D +SFGVL+ E++
Sbjct: 186 APEILLGQKYNHSVDWWSFGVLLYEML 212
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 22/230 (9%)
Query: 61 FFNGNLRTISYFDFQTLKKA--TKNFHPGNLLGRGGFGPVY--RGKL--ADGTLVAVKKL 114
+F G+L+ F T KK ++ + LG G +G V R K+ + + ++K
Sbjct: 15 YFQGDLQATPGM-FITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKT 73
Query: 115 CVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGE 173
V S S+ L EV ++ + H N+++L D LV E K L D +I+
Sbjct: 74 SV--STSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH-- 129
Query: 174 SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQS---KIGDFGL 230
KF N II + G+ YLH+ + IVHRD+K N+LL+ K + KI DFGL
Sbjct: 130 RMKF-NEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGL 185
Query: 231 ARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
+ F E+Q + GT Y APE +R + EK D++S GV++ +++
Sbjct: 186 SAVF-ENQKKMKERL-GTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLA 232
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 87 GNLLGRGGFGPVYRGKLAD----GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
G +G G FG V++G VA+K S +FL E + H ++V
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--------IARGL 194
+L+G ++ ++ ++L GE FL +F + L ++ L
Sbjct: 75 KLIGVITENPVWII---------MELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTAL 124
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
YL R VHRDI A NVL+ K+GDFGL+R+ + ++ + + AP
Sbjct: 125 AYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAP 181
Query: 255 EYAIRGELSEKADIYSFGVLVLEII 279
E + +D++ FGV + EI+
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 14/197 (7%)
Query: 90 LGRGGFGPVYRGKLADGTL----VAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G G V +LA + VAVK + + ++ E+ + + H+N+V+
Sbjct: 14 LGEGAAGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G +G+ + L EY L I E D + + + G+ YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-EDQAYLSTNFAGTLGYTAPEYAIRGEL-S 263
HRDIK N+LLDE+ KI DFGLA F ++ L GTL Y APE R E +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 264 EKADIYSFGVLVLEIIS 280
E D++S G+++ +++
Sbjct: 186 EPVDVWSCGIVLTAMLA 202
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 79 KATKNFHPGNLLGRGGFGPVYR------GKLADGTLVAVKKLCVDKSQQGESEFLSEVRM 132
K + N+ LG+G F V R G ++ KKL Q+ E E R+
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE----ARI 57
Query: 133 ITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRFQIILGI 190
+QH N+VRL + S LV++ + L D++ + +F + + I I
Sbjct: 58 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV----AREFYSEADASHCIQQI 113
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAG 247
+ Y H + IVHR++K N+LL K + K+ DFGLA + +A+ FAG
Sbjct: 114 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAG 168
Query: 248 TLGYTAPEYAIRGELSEKADIYSFGVLV 275
T GY +PE + S+ DI++ GV++
Sbjct: 169 TPGYLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 79 KATKNFHPGNLLGRGGFGPVYR------GKLADGTLVAVKKLCVDKSQQGESEFLSEVRM 132
K + N+ LG+G F V R G ++ KKL Q+ E E R+
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE----ARI 58
Query: 133 ITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRFQIILGI 190
+QH N+VRL + S LV++ + L D++ + +F + + I I
Sbjct: 59 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV----AREFYSEADASHCIQQI 114
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAG 247
+ Y H + IVHR++K N+LL K + K+ DFGLA + +A+ FAG
Sbjct: 115 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAG 169
Query: 248 TLGYTAPEYAIRGELSEKADIYSFGVLV 275
T GY +PE + S+ DI++ GV++
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 79 KATKNFHPGNLLGRGGFGPVYR------GKLADGTLVAVKKLCVDKSQQGESEFLSEVRM 132
K + N+ LG+G F V R G ++ KKL Q+ E E R+
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE----ARI 58
Query: 133 ITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRFQIILGI 190
+QH N+VRL + S LV++ + L D++ + +F + + I I
Sbjct: 59 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV----AREFYSEADASHCIQQI 114
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAG 247
+ Y H + IVHR++K N+LL K + K+ DFGLA + +A+ FAG
Sbjct: 115 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAG 169
Query: 248 TLGYTAPEYAIRGELSEKADIYSFGVLV 275
T GY +PE + S+ DI++ GV++
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 148 CSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R L VY DL + K + +F +I I RGL+Y+H
Sbjct: 90 FTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS--- 143
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-E 261
I+HRD+K SN+ ++E + KI DFGLAR ++ A F T Y APE +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA----GFVATRWYRAPEIMLNWMH 199
Query: 262 LSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+++ R
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 148 CSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R L VY DL + K + +F +I I RGL+Y+H
Sbjct: 90 FTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS--- 143
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-E 261
I+HRD+K SN+ ++E + KI DFGLAR ++ A F T Y APE +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA----GFVATRWYRAPEIMLNWMH 199
Query: 262 LSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+++ R
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 88 NLLGRGGFGPVYRGKLADGT----LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
++LG G F V LA+ LVA+K + + + E +E+ ++ I+H N+V
Sbjct: 24 DVLGTGAFSEVI---LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 144 LLGCCSDGSQRLLVYEYMK-----NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLH 198
L G L+ + + +R ++ Y E D ++R +I + ++YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-----ASR--LIFQVLDAVKYLH 133
Query: 199 EDSHTRIVHRDIKASNVL---LDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPE 255
+ IVHRD+K N+L LDE + I DFGL++ ED + + GT GY APE
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPE 188
Query: 256 YAIRGELSEKADIYSFGVLVLEIISC 281
+ S+ D +S GV+ I+ C
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAY-ILLC 213
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 89 LLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQ--GESEFLSEVRMITSIQHKNLVRLL 145
+LG+G FG V K G AVK + + +Q + L EV+++ + H N+++L
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 146 GCCSDGSQRLLVYE-YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTR 204
D LV E Y D +I S K + +II + G+ Y+H++ +
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEII---SRKRFSEVDAARIIRQVLSGITYMHKN---K 152
Query: 205 IVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGE 261
IVHRD+K N+LL+ K + +I DFGL+ F + + GT Y APE + G
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM--KDKIGTAYYIAPE-VLHGT 209
Query: 262 LSEKADIYSFGVLVLEIIS 280
EK D++S GV++ ++S
Sbjct: 210 YDEKCDVWSTGVILYILLS 228
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 148 CSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R L VY DL + K + +F +I I RGL+Y+H
Sbjct: 86 FTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS--- 139
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-E 261
I+HRD+K SN+ ++E + KI DFGLAR ++ A F T Y APE +
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA----GFVATRWYRAPEIMLNWMH 195
Query: 262 LSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+++ R
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 88 NLLGRGGFGPVYRGKLADGT----LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
++LG G F V LA+ LVA+K + + + E +E+ ++ I+H N+V
Sbjct: 24 DVLGTGAFSEVI---LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 144 LLGCCSDGSQRLLVYEYMK-----NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLH 198
L G L+ + + +R ++ Y E D ++R +I + ++YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-----ASR--LIFQVLDAVKYLH 133
Query: 199 EDSHTRIVHRDIKASNVL---LDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPE 255
+ IVHRD+K N+L LDE + I DFGL++ ED + + GT GY APE
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPE 188
Query: 256 YAIRGELSEKADIYSFGVLVLEIISC 281
+ S+ D +S GV+ I+ C
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAY-ILLC 213
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 18/200 (9%)
Query: 89 LLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQ--GESEFLSEVRMITSIQHKNLVRL 144
+LG+G FG V + K+ G AVK + + +Q + L EV+++ + H N+++L
Sbjct: 33 VLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 145 LGCCSDGSQRLLVYE-YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
D LV E Y D +I S K + +II + G+ Y+H++
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEII---SRKRFSEVDAARIIRQVLSGITYMHKN--- 145
Query: 204 RIVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+IVHRD+K N+LL+ K + +I DFGL+ F + + GT Y APE + G
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM--KDKIGTAYYIAPE-VLHG 202
Query: 261 ELSEKADIYSFGVLVLEIIS 280
EK D++S GV++ ++S
Sbjct: 203 TYDEKCDVWSTGVILYILLS 222
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 30 QNLSP---IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 87 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 143
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 144 KYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM----TGYVATRWYRAP 196
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM----TGYVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 32 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 89 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 145
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 146 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM----TGYVATRWYRAP 198
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 32 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 89 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 145
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 146 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM----TGYVATRWYRAP 198
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGES--EFLSEVRMITSIQHKNLVRLLG 146
+G GGF V + G +VA+K +DK+ G +E+ + +++H+++ +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIK--IMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYH 75
Query: 147 CCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
++ +V EY L D +I D+ TR + I + Y+H +
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYII--SQDRLSEEETRV-VFRQIVSAVAYVHSQGYA-- 130
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGE--LS 263
HRD+K N+L DE + K+ DFGL ++ Y G+L Y APE I+G+ L
Sbjct: 131 -HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPE-LIQGKSYLG 188
Query: 264 EKADIYSFGVLVLEIISC 281
+AD++S G+L L ++ C
Sbjct: 189 SEADVWSMGIL-LYVLMC 205
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 30 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 87 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 143
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 144 KYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM----TGYVATRWYRAP 196
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V + LA A+K L +K ++ + +++ R + S +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 90
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L D + Y KN L L + F TRF I L+Y
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 148
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + +F GT Y +PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ +D+++ G ++ ++++
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 18/200 (9%)
Query: 89 LLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQ--GESEFLSEVRMITSIQHKNLVRL 144
+LG+G FG V + K+ G AVK + + +Q + L EV+++ + H N+++L
Sbjct: 56 VLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 145 LGCCSDGSQRLLVYE-YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
D LV E Y D +I S K + +II + G+ Y+H++
Sbjct: 115 YEFFEDKGYFYLVGEVYTGGELFDEII---SRKRFSEVDAARIIRQVLSGITYMHKN--- 168
Query: 204 RIVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+IVHRD+K N+LL+ K + +I DFGL+ F + + GT Y APE + G
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM--KDKIGTAYYIAPE-VLHG 225
Query: 261 ELSEKADIYSFGVLVLEIIS 280
EK D++S GV++ ++S
Sbjct: 226 TYDEKCDVWSTGVILYILLS 245
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V + LA A+K L +K ++ + +++ R + S +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 86
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L D + Y KN L L + F TRF I L+Y
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 144
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + +F GT Y +PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ +D+++ G ++ ++++
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 32 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 89 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 145
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 146 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM----TGYVATRWYRAP 198
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 88 NLLGRGGFGPVYRGKLADGT----LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
++LG G F V LA+ LVA+K + + + E +E+ ++ I+H N+V
Sbjct: 24 DVLGTGAFSEVI---LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 144 LLGCCSDGSQRLLVYEYMK-----NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLH 198
L G L+ + + +R ++ Y E D ++R +I + ++YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-----ASR--LIFQVLDAVKYLH 133
Query: 199 EDSHTRIVHRDIKASNVL---LDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPE 255
+ IVHRD+K N+L LDE + I DFGL++ ED + + GT GY APE
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPE 188
Query: 256 YAIRGELSEKADIYSFGVLVLEIISC 281
+ S+ D +S GV+ I+ C
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAY-ILLC 213
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 148 CSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R L VY DL + K + +F +I I RGL+Y+H
Sbjct: 96 FTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS--- 149
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-E 261
I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y APE +
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMH 205
Query: 262 LSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+++ R
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 25/200 (12%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQ---QG-ESEFLSEVRMITSIQHKNLVRLL 145
LG+G FG VY + + K+ KSQ +G E + E+ + + ++H N++R+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLF-KSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ------IILGIARGLQYLHE 199
D + L+ E+ GE K L RF + +A L Y HE
Sbjct: 81 NYFHDRKRIYLMLEFAPR--------GELYKELQKHGRFDEQRSATFMEELADALHYCHE 132
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
+++HRDIK N+L+ K + KI DFG + P + GTL Y PE
Sbjct: 133 ---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYLPPEMIEG 186
Query: 260 GELSEKADIYSFGVLVLEII 279
EK D++ GVL E +
Sbjct: 187 KTHDEKVDLWCAGVLCYEFL 206
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 14/214 (6%)
Query: 75 QTLKKATKNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRM 132
+T+ + + + + +G G +G V + G +AVKKL +S E+R+
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 133 ITSIQHKNLVRLLGCCSDGS---QRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG 189
+ ++H+N++ LL + + + VY DL + K + +F +I
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQ 162
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL 249
I RGL+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T
Sbjct: 163 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATR 215
Query: 250 GYTAPEYAIRG-ELSEKADIYSFGVLVLEIISCR 282
Y APE + + DI+S G ++ E+++ R
Sbjct: 216 WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 30 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 87 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 143
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 144 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 196
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 24 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 81 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 137
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 138 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 190
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 36 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 93 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 149
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 150 KYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM----TGYVATRWYRAP 202
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 18/200 (9%)
Query: 89 LLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQ--GESEFLSEVRMITSIQHKNLVRL 144
+LG+G FG V + K+ G AVK + + +Q + L EV+++ + H N+++L
Sbjct: 57 VLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 145 LGCCSDGSQRLLVYE-YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
D LV E Y D +I S K + +II + G+ Y+H++
Sbjct: 116 YEFFEDKGYFYLVGEVYTGGELFDEII---SRKRFSEVDAARIIRQVLSGITYMHKN--- 169
Query: 204 RIVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+IVHRD+K N+LL+ K + +I DFGL+ F + + GT Y APE + G
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM--KDKIGTAYYIAPE-VLHG 226
Query: 261 ELSEKADIYSFGVLVLEIIS 280
EK D++S GV++ ++S
Sbjct: 227 TYDEKCDVWSTGVILYILLS 246
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 27 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 84 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 140
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 141 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 193
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 37 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 94 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 150
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 151 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 203
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQHKNLVRLLGC 147
LG G +G VY+ VA+K++ ++ ++G + EV ++ +QH+N++ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVH 207
+ L++EY +N DL Y + + ++ + + G+ + H R +H
Sbjct: 102 IHHNHRLHLIFEYAEN---DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHS---RRCLH 155
Query: 208 RDIKASNVLLDEKFQS-----KIGDFGLARFF--PEDQAYLSTNFAGTLGYTAPEYAIRG 260
RD+K N+LL S KIGDFGLAR F P Q T+ TL Y PE +
Sbjct: 156 RDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF---THEIITLWYRPPEILLGS 212
Query: 261 -ELSEKADIYSFGVLVLEII 279
S DI+S + E++
Sbjct: 213 RHYSTSVDIWSIACIWAEML 232
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL +S K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGL R ++ T + T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM----TGYVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 148 CSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R L VY DL + K + +F +I I RGL+Y+H
Sbjct: 96 FTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS--- 149
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-E 261
I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y APE +
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMH 205
Query: 262 LSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+++ R
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 32 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 89 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 145
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 146 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 198
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 148 CSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R L VY DL + K + +F +I I RGL+Y+H
Sbjct: 90 FTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS--- 143
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-E 261
I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y APE +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMH 199
Query: 262 LSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+++ R
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 27 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 84 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 140
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 141 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 193
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 27 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 84 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 140
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 141 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 193
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V + LA A+K L +K ++ + +++ R + S +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L D + Y KN L L + F TRF I L+Y
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 145
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + F GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ +D+++ G ++ ++++
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 28/206 (13%)
Query: 88 NLLGRGGFGPVYRGKLADGT----LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
++LG G F V LA+ LVA+K + + E +E+ ++ I+H N+V
Sbjct: 24 DVLGTGAFSEVI---LAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 144 LLGCCSDGSQRLLVYEYMK-----NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLH 198
L G L+ + + +R ++ Y E D ++R +I + ++YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERD-----ASR--LIFQVLDAVKYLH 133
Query: 199 EDSHTRIVHRDIKASNVL---LDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPE 255
+ IVHRD+K N+L LDE + I DFGL++ ED + + GT GY APE
Sbjct: 134 D---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPE 188
Query: 256 YAIRGELSEKADIYSFGVLVLEIISC 281
+ S+ D +S GV+ I+ C
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAY-ILLC 213
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V + LA A+K L +K ++ + +++ R + S +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L D + Y KN L L + F TRF I L+Y
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 145
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + F GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ +D+++ G ++ ++++
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 37 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 94 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 150
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 151 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 203
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 37 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 94 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 150
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 151 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 203
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 22 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 79 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 135
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 136 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 188
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 9/199 (4%)
Query: 89 LLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQ--GESEFLSEVRMITSIQHKNLVRLL 145
+LGRGGFG V+ ++ A G L A KKL + ++ G + E +++ + + +V L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQYLHEDSHT 203
+ LV M + IY + + I I GL++LH+ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELS 263
I++RD+K NVLLD+ +I D GLA Q + +AGT G+ APE + E
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYD 367
Query: 264 EKADIYSFGVLVLEIISCR 282
D ++ GV + E+I+ R
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 27 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 84 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 140
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 141 KYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM----TGYVATRWYRAP 193
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 9/199 (4%)
Query: 89 LLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQ--GESEFLSEVRMITSIQHKNLVRLL 145
+LGRGGFG V+ ++ A G L A KKL + ++ G + E +++ + + +V L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQYLHEDSHT 203
+ LV M + IY + + I I GL++LH+ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELS 263
I++RD+K NVLLD+ +I D GLA Q + +AGT G+ APE + E
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYD 367
Query: 264 EKADIYSFGVLVLEIISCR 282
D ++ GV + E+I+ R
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 31 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 88 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 144
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 145 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 197
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 9/199 (4%)
Query: 89 LLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQ--GESEFLSEVRMITSIQHKNLVRLL 145
+LGRGGFG V+ ++ A G L A KKL + ++ G + E +++ + + +V L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQYLHEDSHT 203
+ LV M + IY + + I I GL++LH+ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELS 263
I++RD+K NVLLD+ +I D GLA Q + +AGT G+ APE + E
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYD 367
Query: 264 EKADIYSFGVLVLEIISCR 282
D ++ GV + E+I+ R
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 9/199 (4%)
Query: 89 LLGRGGFGPVYRGKL-ADGTLVAVKKLCVDKSQQ--GESEFLSEVRMITSIQHKNLVRLL 145
+LGRGGFG V+ ++ A G L A KKL + ++ G + E +++ + + +V L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG--IARGLQYLHEDSHT 203
+ LV M + IY + + I I GL++LH+ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELS 263
I++RD+K NVLLD+ +I D GLA Q + +AGT G+ APE + E
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYD 367
Query: 264 EKADIYSFGVLVLEIISCR 282
D ++ GV + E+I+ R
Sbjct: 368 FSVDYFALGVTLYEMIAAR 386
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 148 CSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R L VY DL + K + +F +I I RGL+Y+H
Sbjct: 87 FTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS--- 140
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-E 261
I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y APE +
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMH 196
Query: 262 LSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+++ R
Sbjct: 197 YNQTVDIWSVGCIMAELLTGR 217
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V + LA A+K L +K ++ + +++ R + S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L D + Y KN L L + F TRF I L+Y
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 147
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + F GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ +D+++ G ++ ++++
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 148 CSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R L VY DL + K + +F +I I RGL+Y+H
Sbjct: 100 FTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS--- 153
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-E 261
I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y APE +
Sbjct: 154 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMH 209
Query: 262 LSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+++ R
Sbjct: 210 YNQTVDIWSVGCIMAELLTGR 230
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 148 CSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R L VY DL + K + +F +I I RGL+Y+H
Sbjct: 88 FTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS--- 141
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-E 261
I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y APE +
Sbjct: 142 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMH 197
Query: 262 LSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+++ R
Sbjct: 198 YNQTVDIWSVGCIMAELLTGR 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 148 CSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R L VY DL + K + +F +I I RGL+Y+H
Sbjct: 86 FTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS--- 139
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-E 261
I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y APE +
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMH 195
Query: 262 LSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+++ R
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ + +H+N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI---- 88
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 89 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 145 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 30 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 87 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 143
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 144 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 196
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 87 GNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGE--SEFLSEVRMITSIQHKNLVR 143
G +LG GG V+ + L D VAVK L D ++ F E + ++ H +V
Sbjct: 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 144 LLGC----CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE 199
+ G +V EY+ +L +++ E + ++I + L + H+
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQ 134
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA--GTLGYTAPEYA 257
+ I+HRD+K +N+++ K+ DFG+AR + ++ A GT Y +PE A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 258 IRGELSEKADIYSFGVLVLEIIS 280
+ ++D+YS G ++ E+++
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLT 214
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 36 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 93 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 149
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 150 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 202
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V + LA A+K L +K ++ + +++ R + S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L D + Y KN L L + F TRF I L+Y
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 147
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + F GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ +D+++ G ++ ++++
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 31 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 88 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 144
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 145 KYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM----TGYVATRWYRAP 197
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 148 CSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R L VY DL + K + +F +I I RGL+Y+H
Sbjct: 110 FTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS--- 163
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-E 261
I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y APE +
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMH 219
Query: 262 LSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+++ R
Sbjct: 220 YNQTVDIWSVGCIMAELLTGR 240
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V + LA A+K L +K ++ + +++ R + S +
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 71
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L D + Y KN L L + F TRF I L+Y
Sbjct: 72 DHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 129
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + F GT Y +PE
Sbjct: 130 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ +D+++ G ++ ++++
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVA 211
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 48 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 105 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 161
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 162 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 214
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 87 GNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGE--SEFLSEVRMITSIQHKNLVR 143
G +LG GG V+ + L D VAVK L D ++ F E + ++ H +V
Sbjct: 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 144 LLGC----CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE 199
+ G +V EY+ +L +++ E + ++I + L + H+
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQ 134
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA--GTLGYTAPEYA 257
+ I+HRD+K +N+++ K+ DFG+AR + ++ A GT Y +PE A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 258 IRGELSEKADIYSFGVLVLEIIS 280
+ ++D+YS G ++ E+++
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLT 214
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V + LA A+K L +K ++ + +++ R + S +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L D + Y KN L L + F TRF I L+Y
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 145
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + F GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ +D+++ G ++ ++++
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 44 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 101 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 157
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 158 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 210
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 45 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 102 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 158
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y AP
Sbjct: 159 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAP 211
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 148 CSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R L VY DL + K + +F +I I RGL+Y+H
Sbjct: 86 FTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS--- 139
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-E 261
I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y APE +
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMH 195
Query: 262 LSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+++ R
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 148 CSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R L VY DL + K + +F +I I RGL+Y+H
Sbjct: 109 FTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS--- 162
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-E 261
I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y APE +
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMH 218
Query: 262 LSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+++ R
Sbjct: 219 YNQTVDIWSVGCIMAELLTGR 239
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V + LA A+K L +K ++ + +++ R + S +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 90
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L D + Y KN L L + F TRF I L+Y
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 148
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + F GT Y +PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ +D+++ G ++ ++++
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V + LA A+K L +K ++ + +++ R + S +
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 92
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L D + Y KN L L + F TRF I L+Y
Sbjct: 93 DHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 150
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + F GT Y +PE
Sbjct: 151 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ +D+++ G ++ ++++
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVA 232
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V + LA A+K L +K ++ + +++ R + S +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 86
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L D + Y KN L L + F TRF I L+Y
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 144
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + F GT Y +PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ +D+++ G ++ ++++
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 12/195 (6%)
Query: 90 LGRGGFGPVYR-GKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G FG V+R + A G A K + E+ E++ ++ ++H LV L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRHPTLVNLHDAF 117
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
D ++ +++YE+M L + E +K ++ + + + +GL ++HE+++ VH
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMHENNY---VHL 173
Query: 209 DIKASNVLLDEKFQS--KIGDFGL-ARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEK 265
D+K N++ K + K+ DFGL A P+ ++T GT + APE A +
Sbjct: 174 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYY 230
Query: 266 ADIYSFGVLVLEIIS 280
D++S GVL ++S
Sbjct: 231 TDMWSVGVLSYILLS 245
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V + LA A+K L +K ++ + +++ R + S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L D + Y KN L L + F TRF I L+Y
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 147
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + F GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ +D+++ G ++ ++++
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ + +H+N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI---- 88
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 89 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 145 ---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGI---- 90
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 87 GNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGE--SEFLSEVRMITSIQHKNLVR 143
G +LG GG V+ + L D VAVK L D ++ F E + ++ H +V
Sbjct: 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 144 LLGC----CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE 199
+ G +V EY+ +L +++ E + ++I + L + H+
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQ 134
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA--GTLGYTAPEYA 257
+ I+HRD+K +N+L+ K+ DFG+AR + + A GT Y +PE A
Sbjct: 135 NG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA 191
Query: 258 IRGELSEKADIYSFGVLVLEIIS 280
+ ++D+YS G ++ E+++
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLT 214
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 83 NFHPGNLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESE--FLSEVRMITSIQHK 139
NF +LG+G FG V ++ + G L AVK L D Q + ++E R+++ ++
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 140 NLVRLLGCCSDGSQRLL-VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLH 198
+ L CC RL V E++ L I +S +F RF I L +LH
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ-KSRRFDEARARFYAA-EIISALMFLH 141
Query: 199 EDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAI 258
+ I++RD+K NVLLD + K+ DFG+ + + +T F GT Y APE
Sbjct: 142 DKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT-FCGTPDYIAPEILQ 197
Query: 259 RGELSEKADIYSFGVLVLEII 279
D ++ GVL+ E++
Sbjct: 198 EMLYGPAVDWWAMGVLLYEML 218
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 19/202 (9%)
Query: 88 NLLGRGGFGPVYRGKLADGT-------LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
+LG+G FG V+ K G+ + +KK + + ++ E ++ + H
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM--ERDILVEVNHPF 87
Query: 141 LVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHED 200
+V+L + L+ ++++ L + E F +F + +A L +LH
Sbjct: 88 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLA-ELALALDHLHS- 144
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR--FFPEDQAYLSTNFAGTLGYTAPEYAI 258
I++RD+K N+LLDE+ K+ DFGL++ E +AY +F GT+ Y APE
Sbjct: 145 --LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY---SFCGTVEYMAPEVVN 199
Query: 259 RGELSEKADIYSFGVLVLEIIS 280
R ++ AD +SFGVL+ E+++
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLT 221
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V + LA A+K L +K ++ + +++ R + S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L D + Y KN L L + F TRF I L+Y
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 147
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + F GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ +D+++ G ++ ++++
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 12/195 (6%)
Query: 90 LGRGGFGPVYR-GKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G FG V+R + A G A K + E+ E++ ++ ++H LV L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRHPTLVNLHDAF 223
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
D ++ +++YE+M L + E +K ++ + + + +GL ++HE+++ VH
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMHENNY---VHL 279
Query: 209 DIKASNVLLDEKFQS--KIGDFGL-ARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEK 265
D+K N++ K + K+ DFGL A P+ ++T GT + APE A +
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYY 336
Query: 266 ADIYSFGVLVLEIIS 280
D++S GVL ++S
Sbjct: 337 TDMWSVGVLSYILLS 351
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 148 CSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R L VY DL + K + +F +I I RGL+Y+H
Sbjct: 86 FTPA--RSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF-LIYQILRGLKYIHS--- 139
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-E 261
I+HRD+K SN+ ++E + KI DFGLAR ++ T + T Y APE +
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGYVATRWYRAPEIMLNWMH 195
Query: 262 LSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+++ R
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 86
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 87 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 86
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 87 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V + LA A+K L +K ++ + +++ R + S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L D + Y KN L L + F TRF I L+Y
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 147
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + F GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ +D+++ G ++ ++++
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVA 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 86
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 87 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 86
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 87 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 106
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGES------DKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R E MK+ L + G + L+ + I RGL+Y+H
Sbjct: 107 -NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS--- 162
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYAIRG 260
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE +
Sbjct: 163 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 261 E-LSEKADIYSFGVLVLEIISCR 282
+ ++ DI+S G ++ E++S R
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 94
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 95 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 150
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 151 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 86
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 87 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 142
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 106
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 107 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 162
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 163 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 88
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 89 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 144
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 145 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI D+GLAR ++ T + T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEM----TGYVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRGKLA--DGTLV--AVKKLCVDKSQQGE-SEFLSEVRMITSI 136
+ F G +LG+G FG V +L DG+ V AVK L D + EFL E +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 137 QHKNLVRLLGCC--SDGSQRL----LVYEYMKNRSLDLLIY----GESDKFLNWSTRFQI 186
H ++ +L+G S RL ++ +MK+ L + GE+ L T +
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR-FFPEDQAYLSTNF 245
++ IA G++YL S +HRD+ A N +L E + DFGL+R + D Y
Sbjct: 143 MVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD--YYRQGC 197
Query: 246 AGTL--GYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
A L + A E + +D+++FGV + EI++
Sbjct: 198 ASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 19/202 (9%)
Query: 88 NLLGRGGFGPVYRGKLADGT-------LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
+LG+G FG V+ K G+ + +KK + + ++ E ++ + H
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM--ERDILVEVNHPF 88
Query: 141 LVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHED 200
+V+L + L+ ++++ L + E F +F + +A L +LH
Sbjct: 89 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLA-ELALALDHLHS- 145
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR--FFPEDQAYLSTNFAGTLGYTAPEYAI 258
I++RD+K N+LLDE+ K+ DFGL++ E +AY +F GT+ Y APE
Sbjct: 146 --LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY---SFCGTVEYMAPEVVN 200
Query: 259 RGELSEKADIYSFGVLVLEIIS 280
R ++ AD +SFGVL+ E+++
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLT 222
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 19/202 (9%)
Query: 88 NLLGRGGFGPVYRGKLADGT-------LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKN 140
+LG+G FG V+ K G+ + +KK + + ++ E ++ + H
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM--ERDILVEVNHPF 87
Query: 141 LVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHED 200
+V+L + L+ ++++ L + E F +F + +A L +LH
Sbjct: 88 IVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLA-ELALALDHLHS- 144
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR--FFPEDQAYLSTNFAGTLGYTAPEYAI 258
I++RD+K N+LLDE+ K+ DFGL++ E +AY +F GT+ Y APE
Sbjct: 145 --LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY---SFCGTVEYMAPEVVN 199
Query: 259 RGELSEKADIYSFGVLVLEIIS 280
R ++ AD +SFGVL+ E+++
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLT 221
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 114/250 (45%), Gaps = 23/250 (9%)
Query: 87 GNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVR 143
G+ LG G FG V G+ G VAVK L K S + E++ + +H ++++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 144 LLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
L S + +V EY+ L D + + + FQ IL + Y H
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS---AVDYCHRHM- 131
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGEL 262
+VHRD+K NVLLD +KI DFGL+ D +L T+ G+ Y APE I G L
Sbjct: 132 --VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTS-CGSPNYAAPE-VISGRL 186
Query: 263 --SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320
+ DI+S GV++ ++ TLP + +++P K+ RG + + + R
Sbjct: 187 YAGPEVDIWSCGVILYALLCG------TLPFDDEHVPTLFKKI--RGGVFYIPEYLNRSV 238
Query: 321 GIVERDALQV 330
+ LQV
Sbjct: 239 ATLLMHMLQV 248
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 82 KNFHPGNLLGRGGFGP-VYRGKLADGTLVAVKKLCVDKS---QQGESEFLSEVRMITS-I 136
++F G +LG G F V +LA A+K L +K ++ + +++ R + S +
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H V+L D + Y KN L L + F TRF I L+Y
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFDETCTRFYTA-EIVSALEY 145
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPE 255
LH I+HRD+K N+LL+E +I DFG A+ PE + + F GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
+ +D+++ G ++ ++++
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 37/218 (16%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKL--CVDKSQQGESEFLSEVRMITSIQ-HKNLVRLL 145
LG+G +G V++ G +VAVKK+ S + F E+ ++T + H+N+V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLL 75
Query: 146 GCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
+ R LV++YM+ L +I L + ++ + + ++YLH
Sbjct: 76 NVLRADNDRDVYLVFDYMET-DLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG-- 129
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARF---------------------FPEDQAYLS 242
++HRD+K SN+LL+ + K+ DFGL+R F +DQ L
Sbjct: 130 -LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL- 187
Query: 243 TNFAGTLGYTAPEYAI-RGELSEKADIYSFGVLVLEII 279
T++ T Y APE + + ++ D++S G ++ EI+
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL 225
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 18/200 (9%)
Query: 89 LLGRGGFGPVY--RGKLADGTLVAVKKLCVDKSQQ--GESEFLSEVRMITSIQHKNLVRL 144
+LG+G FG V + K+ G AVK + + +Q + L EV+++ + H N+ +L
Sbjct: 33 VLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 145 LGCCSDGSQRLLVYE-YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
D LV E Y D +I S K + +II + G+ Y H++
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEII---SRKRFSEVDAARIIRQVLSGITYXHKN--- 145
Query: 204 RIVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+IVHRD+K N+LL+ K + +I DFGL+ F + + GT Y APE + G
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--XKDKIGTAYYIAPE-VLHG 202
Query: 261 ELSEKADIYSFGVLVLEIIS 280
EK D++S GV++ ++S
Sbjct: 203 TYDEKCDVWSTGVILYILLS 222
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 84
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 85 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 140
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 141 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 91
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 92 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 147
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 148 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 92
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 93 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 148
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 149 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 83
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 84 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 139
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 140 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 84
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 85 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 140
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 141 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 96/218 (44%), Gaps = 27/218 (12%)
Query: 73 DFQTLKKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQ---QG-ESEFLS 128
D T +F G LG+G FG VY + + K+ KSQ +G E +
Sbjct: 14 DILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLF-KSQIEKEGVEHQLRR 72
Query: 129 EVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ--- 185
E+ + + H N++RL D + L+ EY GE K L S F
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPR--------GELYKELQKSCTFDEQR 124
Query: 186 ---IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS 242
I+ +A L Y H +++HRDIK N+LL K + KI DFG + P +
Sbjct: 125 TATIMEELADALMYCHG---KKVIHRDIKPENLLLGLKGELKIADFGWSVHAP---SLRR 178
Query: 243 TNFAGTLGYTAPEYAIRGEL-SEKADIYSFGVLVLEII 279
GTL Y PE I G + +EK D++ GVL E++
Sbjct: 179 KTMCGTLDYLPPE-MIEGRMHNEKVDLWCIGVLCYELL 215
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ T T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGXVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 34/289 (11%)
Query: 75 QTLKKATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRM- 132
Q + + P LGRG +G V + + + G ++AVK++ + Q + L ++ +
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 133 ITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF--QIILGI 190
+ ++ V G + E M + SLD DK +I + I
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSI 162
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
+ L++LH S ++HRD+K SNVL++ Q K+ DFG++ + + A T AG
Sbjct: 163 VKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA--KTIDAGCKP 218
Query: 251 YTAPEYAIRGELSE-----KADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAW--KL 303
Y APE I EL++ K+DI+S G+ ++E+ R P +W
Sbjct: 219 YMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILR-------------FPYDSWGTPF 264
Query: 304 YERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIV 352
+ +++E P++ ++ + + ++ CL+ + +RP E++
Sbjct: 265 QQLKQVVEEPSPQLP----ADKFSAEFVDFTSQCLKKNSKERPTYPELM 309
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+LG G FG V++ + L K+ + + + E +E+ ++ + H NL++L
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ +LV EY+ L I ES T + I G++++H+ I+H
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT-ILFMKQICEGIRHMHQ---MYILHL 211
Query: 209 DIKASNVLL---DEKFQSKIGDFGLARFF-PEDQAYLSTNFAGTLGYTAPEYAIRGELSE 264
D+K N+L D K Q KI DFGLAR + P ++ L NF GT + APE +S
Sbjct: 212 DLKPENILCVNRDAK-QIKIIDFGLARRYKPREK--LKVNF-GTPEFLAPEVVNYDFVSF 267
Query: 265 KADIYSFGVLVLEIIS 280
D++S GV+ ++S
Sbjct: 268 PTDMWSVGVIAYMLLS 283
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 90 LGRGGFGPVYRGKLA-DGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G G V + G VAVK + + K Q+ E F +EV ++ QH N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF-NEVVIMRDYQHFNVVEMYKSY 111
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
G + ++ E+++ +L ++ S LN + + + L YLH ++HR
Sbjct: 112 LVGEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQG---VIHR 165
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
DIK+ ++LL + K+ DFG +D GT + APE R + + DI
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEVISRSLYATEVDI 224
Query: 269 YSFGVLVLEII 279
+S G++V+E++
Sbjct: 225 WSLGIMVIEMV 235
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 29/208 (13%)
Query: 90 LGRGGFGPVYRGKLADGT-LVAVKKL----CVDKSQQGESEFLSEVRMITSIQHKNLVRL 144
+G+G FG V + D + A+K + CV++++ E++++ ++H LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEV--RNVFKELQIMQGLEHPFLVNL 80
Query: 145 LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ------IILGIARGLQYLH 198
D +V +DLL+ G+ L + F+ I + L YL
Sbjct: 81 WYSFQDEEDMFMV--------VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ 132
Query: 199 EDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPE-YA 257
+ RI+HRD+K N+LLDE I DF +A P + T AGT Y APE ++
Sbjct: 133 ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI--TTMAGTKPYMAPEMFS 187
Query: 258 IR--GELSEKADIYSFGVLVLEIISCRK 283
R S D +S GV E++ R+
Sbjct: 188 SRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V T VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 149 SDGSQRLL--VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
+ + VY DL +S + N + + I RGL+Y+H ++
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-FLYQILRGLKYIHS---ANVL 166
Query: 207 HRDIKASNVLLDEKFQSKIGDFGLARFF-PE-DQAYLSTNFAGTLGYTAPEYAIRGE-LS 263
HRD+K SN+L++ KI DFGLAR PE D T T Y APE + + +
Sbjct: 167 HRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYT 226
Query: 264 EKADIYSFGVLVLEIISCR 282
+ DI+S G ++ E++S R
Sbjct: 227 KSIDIWSVGCILAEMLSNR 245
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 127/258 (49%), Gaps = 36/258 (13%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQHKNLVRLLGC 147
+G+G FG V++ + G VA+KK+ ++ ++G L E++++ ++H+N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 148 CSDGSQRL--------LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE 199
C + LV+++ ++ L L+ KF S +++ + GL Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKF-TLSEIKRVMQMLLNGLYYIHR 143
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFP---EDQAYLSTNFAGTLGYTAPEY 256
+ +I+HRD+KA+NVL+ K+ DFGLAR F Q N TL Y PE
Sbjct: 144 N---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 200
Query: 257 AI-RGELSEKADIYSFGVLVLEIIS----CRKNTD---LTLPSEM--QYLPEY-----AW 301
+ + D++ G ++ E+ + + NT+ L L S++ PE +
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNY 260
Query: 302 KLYERGRILELVDPRMRK 319
+LYE+ LELV + RK
Sbjct: 261 ELYEK---LELVKGQKRK 275
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 88 NLLGRGGFGPVYRGKLA----DGTLVAVKKLCVDKSQQGESEFLSEVR------MITSIQ 137
+LG+G FG V+ + G L A+K L ++ + VR ++ +
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVL-----KKATLKVRDRVRTKMERDILADVN 88
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYL 197
H +V+L + L+ ++++ L + E F +F + +A GL +L
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLA-ELALGLDHL 146
Query: 198 HEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR--FFPEDQAYLSTNFAGTLGYTAPE 255
H I++RD+K N+LLDE+ K+ DFGL++ E +AY +F GT+ Y APE
Sbjct: 147 HS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY---SFCGTVEYMAPE 200
Query: 256 YAIRGELSEKADIYSFGVLVLEIIS 280
R S AD +S+GVL+ E+++
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLT 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKF-------LNWSTRFQIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + L+ + I RGL+Y+H
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS 146
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 48 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 105 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 161
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI DFGLAR ++ + T Y AP
Sbjct: 162 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----XGYVATRWYRAP 214
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 24/204 (11%)
Query: 90 LGRGGFGPV---YRGKLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLL 145
+G G +G V Y +L VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 146 GCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE 199
+ D S+ LV M DL +S + +F ++ + RGL+Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM---GADLNNIVKSQALSDEHVQF-LVYQLLRGLKYIHS 149
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I+HRD+K SNV ++E + +I DFGLAR E+ T + T Y APE +
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEM----TGYVATRWYRAPEIMLN 202
Query: 260 G-ELSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E++ +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA++K+ + Q L E++++ +H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T + T Y APE
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQHKNLVRLLGC 147
+G+G FG V++ + G VA+KK+ ++ ++G L E++++ ++H+N+V L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 148 CSDGSQRL--------LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE 199
C + LV+++ ++ L L+ KF S +++ + GL Y+H
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKF-TLSEIKRVMQMLLNGLYYIHR 142
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFP---EDQAYLSTNFAGTLGYTAPEY 256
+ +I+HRD+KA+NVL+ K+ DFGLAR F Q N TL Y PE
Sbjct: 143 N---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 199
Query: 257 AI-RGELSEKADIYSFGVLVLEI 278
+ + D++ G ++ E+
Sbjct: 200 LLGERDYGPPIDLWGAGCIMAEM 222
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 131/288 (45%), Gaps = 34/288 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRM-I 133
+++ + P LGRG +G V + + + G ++AVK++ + Q + L ++ + +
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM 60
Query: 134 TSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF--QIILGIA 191
++ V G + E M + SLD DK +I + I
Sbjct: 61 RTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 119
Query: 192 RGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGY 251
+ L++LH S ++HRD+K SNVL++ Q K+ DFG++ + +D A AG Y
Sbjct: 120 KALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA--KDIDAGCKPY 175
Query: 252 TAPEYAIRGELSE-----KADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAW--KLY 304
APE I EL++ K+DI+S G+ ++E+ R P +W
Sbjct: 176 MAPE-RINPELNQKGYSVKSDIWSLGITMIELAILR-------------FPYDSWGTPFQ 221
Query: 305 ERGRILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIV 352
+ +++E P++ ++ + + ++ CL+ + +RP E++
Sbjct: 222 QLKQVVEEPSPQLP----ADKFSAEFVDFTSQCLKKNSKERPTYPELM 265
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQHKNLVRLLGC 147
+G+G FG V++ + G VA+KK+ ++ ++G L E++++ ++H+N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 148 CSDGSQRL--------LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE 199
C + LV+++ ++ L L+ KF S +++ + GL Y+H
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKF-TLSEIKRVMQMLLNGLYYIHR 143
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFP---EDQAYLSTNFAGTLGYTAPEY 256
+ +I+HRD+KA+NVL+ K+ DFGLAR F Q N TL Y PE
Sbjct: 144 N---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 200
Query: 257 AI-RGELSEKADIYSFGVLVLEI 278
+ + D++ G ++ E+
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEM 223
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G FG K DG +K++ + + S + E EV ++ +++H N+V+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIYGES------DKFLNWSTRFQIILGIARGLQYLHEDS 201
+ +V +Y + L I + D+ L+W + I L+++H+
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW------FVQICLALKHVHD-- 143
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGE 261
+I+HRDIK+ N+ L + ++GDFG+AR L+ GT Y +PE
Sbjct: 144 -RKILHRDIKSQNIFLTKDGTVQLGDFGIARVL-NSTVELARACIGTPYYLSPEICENKP 201
Query: 262 LSEKADIYSFGVLVLEIISCR 282
+ K+DI++ G ++ E+ + +
Sbjct: 202 YNNKSDIWALGCVLYELCTLK 222
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQG-ESEFLSEVRMITSIQHKNLVRLLGC 147
+G+G FG V++ + G VA+KK+ ++ ++G L E++++ ++H+N+V L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 148 CSDGSQRL--------LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE 199
C + LV+++ ++ L L+ KF S +++ + GL Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKF-TLSEIKRVMQMLLNGLYYIHR 143
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFP---EDQAYLSTNFAGTLGYTAPEY 256
+ +I+HRD+KA+NVL+ K+ DFGLAR F Q N TL Y PE
Sbjct: 144 N---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 200
Query: 257 AI-RGELSEKADIYSFGVLVLEI 278
+ + D++ G ++ E+
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI D GLAR ++ T + T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM----TGYVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI FGLAR ++ T + T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEM----TGYVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEF-LSEVRMITSIQHKNLVRLLGC 147
+G G +G V++ + D G +VA+KK + + L E+RM+ ++H NLV LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVH 207
+ LV+EY D + E D++ + + LQ ++ +H
Sbjct: 71 FRRKRRLHLVFEYC-----DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIH 125
Query: 208 RDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAI-RGELSEKA 266
RD+K N+L+ + K+ DFG AR Y A T Y +PE + +
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRSPELLVGDTQYGPPV 184
Query: 267 DIYSFGVLVLEIIS 280
D+++ G + E++S
Sbjct: 185 DVWAIGCVFAELLS 198
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 148 CSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R L VY DL + K + +F +I I RGL+Y+H
Sbjct: 90 FTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS--- 143
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-E 261
I+HRD+K SN+ ++E + KI DF LAR ++ T + T Y APE +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEM----TGYVATRWYRAPEIMLNWMH 199
Query: 262 LSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+++ R
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI D GLAR ++ T + T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM----TGYVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 32/221 (14%)
Query: 71 YFD-FQTLKKATKNFHPGNLLGRGGFGPVYRGKLADGT------LVAVKKLCVDKSQQGE 123
YF T + T ++ LG+G F V R T ++ KKL Q+ E
Sbjct: 19 YFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE 78
Query: 124 SEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL--DLLI---YGESDKFL 178
E R+ ++H N+VRL S+ LV++ + L D++ Y E+D
Sbjct: 79 RE----ARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS- 133
Query: 179 NWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQS---KIGDFGLA-RFF 234
I I + ++H+ IVHRD+K N+LL K + K+ DFGLA
Sbjct: 134 ------HCIHQILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ 184
Query: 235 PEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLV 275
E QA+ FAGT GY +PE + + DI++ GV++
Sbjct: 185 GEQQAWF--GFAGTPGYLSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 82 KNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKS--QQGESEFLSEVRMITSIQH 138
K F LG G F V + A G L AVK C+ K + ES +E+ ++ I+H
Sbjct: 22 KIFEFKETLGTGAFSEVVLAEEKATGKLFAVK--CIPKKALKGKESSIENEIAVLRKIKH 79
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMK-----NRSLDLLIYGESDKFLNWSTRFQIILGIARG 193
+N+V L + LV + + +R ++ Y E D ST + +L
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDA----STLIRQVLD---A 132
Query: 194 LQYLHEDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
+ YLH IVHRD+K N+L DE+ + I DFGL++ E + + + GT G
Sbjct: 133 VYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPG 187
Query: 251 YTAPEYAIRGELSEKADIYSFGVLVLEIISC 281
Y APE + S+ D +S GV+ I+ C
Sbjct: 188 YVAPEVLAQKPYSKAVDCWSIGVIAY-ILLC 217
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 87 GNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGE--SEFLSEVRMITSIQHKNLVR 143
G +LG GG V+ + L VAVK L D ++ F E + ++ H +V
Sbjct: 17 GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 144 LLGC----CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE 199
+ G +V EY+ +L +++ E + ++I + L + H+
Sbjct: 77 VYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQ 134
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA--GTLGYTAPEYA 257
+ I+HRD+K +N+++ K+ DFG+AR + ++ A GT Y +PE A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 258 IRGELSEKADIYSFGVLVLEIIS 280
+ ++D+YS G ++ E+++
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLT 214
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 21/209 (10%)
Query: 82 KNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHK 139
+N P +G G +G V G VAVKKL +S E+R++ ++H+
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 140 NLVRLLGCCSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
N++ LL + R L VY DL + K + +F +I I RGL
Sbjct: 82 NVIGLLDVFTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGL 138
Query: 195 QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAP 254
+Y+H I+HRD+K SN+ ++E + KI D GLAR ++ T + T Y AP
Sbjct: 139 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEM----TGYVATRWYRAP 191
Query: 255 EYAIRG-ELSEKADIYSFGVLVLEIISCR 282
E + ++ DI+S G ++ E+++ R
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 24/201 (11%)
Query: 90 LGRGGFGPV---YRGKLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLL 145
+G G +G V Y +L VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 146 GCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE 199
+ D S+ LV M DL + + +F ++ + RGL+Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLM---GADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIHS 141
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I+HRD+K SNV ++E + +I DFGLAR E+ T + T Y APE +
Sbjct: 142 AG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEM----TGYVATRWYRAPEIMLN 194
Query: 260 G-ELSEKADIYSFGVLVLEII 279
++ DI+S G ++ E++
Sbjct: 195 WMHYNQTVDIWSVGCIMAELL 215
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 113/250 (45%), Gaps = 23/250 (9%)
Query: 87 GNLLGRGGFGPVYRGKLA-DGTLVAVKKLCVDK--SQQGESEFLSEVRMITSIQHKNLVR 143
G+ LG G FG V G+ G VAVK L K S + E++ + +H ++++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 144 LLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
L S + +V EY+ L D + + + FQ IL + Y H
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS---AVDYCHRHM- 131
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGEL 262
+VHRD+K NVLLD +KI DFGL+ D +L + G+ Y APE I G L
Sbjct: 132 --VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRDS-CGSPNYAAPE-VISGRL 186
Query: 263 --SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVDPRMRKE 320
+ DI+S GV++ ++ TLP + +++P K+ RG + + + R
Sbjct: 187 YAGPEVDIWSCGVILYALLCG------TLPFDDEHVPTLFKKI--RGGVFYIPEYLNRSV 238
Query: 321 GIVERDALQV 330
+ LQV
Sbjct: 239 ATLLMHMLQV 248
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 89 LLGRGGFGPVYRG-KLADGTLVAVKKLCVDK--SQQGES--EFLSEVRMITSIQHKNLVR 143
++G+G F V R G AVK + V K S G S + E + ++H ++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF--QIILGIARGLQYLHEDS 201
LL S +V+E+M L I +D +S + I L+Y H+++
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 202 HTRIVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAI 258
I+HRD+K NVLL K S K+GDFG+A E ++ GT + APE
Sbjct: 151 ---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE-SGLVAGGRVGTPHFMAPEVVK 206
Query: 259 RGELSEKADIYSFGVLVLEIIS 280
R + D++ GV++ ++S
Sbjct: 207 REPYGKPVDVWGCGVILFILLS 228
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 8/194 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLC-VDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G G V + + L+ +KL ++ ++ + E++++ +V G
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 83
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ + E+M SLD ++ + K + ++ + + RGL YL E +I+HR
Sbjct: 84 YSDGEISICMEHMDGGSLDQVL--KEAKRIPEEILGKVSIAVLRGLAYLREKH--QIMHR 139
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+K SN+L++ + + K+ DFG++ + A +F GT Y APE S ++DI
Sbjct: 140 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMAPERLQGTHYSVQSDI 196
Query: 269 YSFGVLVLEIISCR 282
+S G+ ++E+ R
Sbjct: 197 WSMGLSLVELAVGR 210
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 18/201 (8%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 148 CSDGSQRLL-----VYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
+ R L VY DL + K + +F +I I RGL+Y+H
Sbjct: 110 FTPA--RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHS--- 163
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG-E 261
I+HRD+K SN+ ++E + KI DFGLAR ++ T Y APE +
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----XGXVATRWYRAPEIMLNWMH 219
Query: 262 LSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+++ R
Sbjct: 220 YNQTVDIWSVGCIMAELLTGR 240
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 90 LGRGGFGPV---YRGKLADGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLL 145
+G G +G V Y +L VAVKKL +S E+R++ ++H+N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 146 GCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE 199
+ D S+ LV M DL + + +F ++ + RGL+Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM---GADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIHS 149
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I+HRD+K SNV ++E + +I DFGLAR E+ T + T Y APE +
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEM----TGYVATRWYRAPEIMLN 202
Query: 260 G-ELSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E++ +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVVAA--YDAILERNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS-----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
++ + HKN++ LL + + Q + + + + +L +I E D +Q+
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
++GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 136 LVGI----KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYV 186
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S GV++ E+I
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 87 GNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGE--SEFLSEVRMITSIQHKNLVR 143
G +LG GG V+ + L VAVK L D ++ F E + ++ H +V
Sbjct: 17 GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 144 LLGC----CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE 199
+ G +V EY+ +L +++ E + ++I + L + H+
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQ 134
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA--GTLGYTAPEYA 257
+ I+HRD+K +N+++ K+ DFG+AR + ++ A GT Y +PE A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 258 IRGELSEKADIYSFGVLVLEIIS 280
+ ++D+YS G ++ E+++
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLT 214
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 31/201 (15%)
Query: 90 LGRGGFGPVYR------GKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LG+G F V R G+ ++ KKL Q+ E E R+ ++H N+VR
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLERE----ARICRLLKHPNIVR 85
Query: 144 LLGCCSDGSQRLLVYEYMKNRSL--DLLI---YGESDKFLNWSTRFQIILGIARGLQYLH 198
L S+ L+++ + L D++ Y E+D I I + + H
Sbjct: 86 LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS-------HCIQQILEAVLHCH 138
Query: 199 EDSHTRIVHRDIKASNVLLDEKFQS---KIGDFGLA-RFFPEDQAYLSTNFAGTLGYTAP 254
+ +VHRD+K N+LL K + K+ DFGLA E QA+ FAGT GY +P
Sbjct: 139 Q---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF--GFAGTPGYLSP 193
Query: 255 EYAIRGELSEKADIYSFGVLV 275
E + + D+++ GV++
Sbjct: 194 EVLRKDPYGKPVDLWACGVIL 214
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 31/215 (14%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYR------GKLADGTLVAVKKLCVDKSQQGESEFLSE 129
T + T+ + LG+G F V R G+ ++ KKL Q+ E E
Sbjct: 5 TCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLERE---- 60
Query: 130 VRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL--DLLI---YGESDKFLNWSTRF 184
R+ ++H N+VRL S+ L+++ + L D++ Y E+D
Sbjct: 61 ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADAS------- 113
Query: 185 QIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQS---KIGDFGLA-RFFPEDQAY 240
I I + + H+ +VHR++K N+LL K + K+ DFGLA E QA+
Sbjct: 114 HCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW 170
Query: 241 LSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLV 275
FAGT GY +PE + + D+++ GV++
Sbjct: 171 F--GFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS-----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
++ + HKN++ LL + + Q + + + + +L +I E D +Q+
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
++GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 136 LVGI----KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYV 186
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S GV++ E+I
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 87 GNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGE--SEFLSEVRMITSIQHKNLVR 143
G +LG GG V+ + L VAVK L D ++ F E + ++ H +V
Sbjct: 34 GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 93
Query: 144 LLGC----CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHE 199
+ G +V EY+ +L +++ E + ++I + L + H+
Sbjct: 94 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQ 151
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA--GTLGYTAPEYA 257
+ I+HRD+K +N+++ K+ DFG+AR + ++ A GT Y +PE A
Sbjct: 152 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 208
Query: 258 IRGELSEKADIYSFGVLVLEIIS 280
+ ++D+YS G ++ E+++
Sbjct: 209 RGDSVDARSDVYSLGCVLYEVLT 231
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 90
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 91 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 146
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T Y APE
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 203
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+G G +G V + VA+KK+ + Q L E++++ +H+N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI---- 91
Query: 149 SDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF-------QIILGIARGLQYLHE 199
+ R E MK+ + DL+ E+D + T+ + I RGL+Y+H
Sbjct: 92 -NDIIRAPTIEQMKDVYIVQDLM---ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS 147
Query: 200 DSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTLGYTAPEYA 257
++HRD+K SN+LL+ KI DFGLAR D + T Y APE
Sbjct: 148 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 204
Query: 258 IRGE-LSEKADIYSFGVLVLEIISCR 282
+ + ++ DI+S G ++ E++S R
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 23/197 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G+G F V R KL G A K + K S + + E R+ ++H N+VRL
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 148 CSDGSQRLLVYEYMKNRSL--DLLI---YGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
S+ LV++ + L D++ Y E+D I I + + H+
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-------HCIQQILEAVLHCHQ--- 121
Query: 203 TRIVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQ-AYLSTNFAGTLGYTAPEYAI 258
+VHRD+K N+LL K + K+ DFGLA DQ A+ FAGT GY +PE
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWF--GFAGTPGYLSPEVLR 179
Query: 259 RGELSEKADIYSFGVLV 275
+ + DI++ GV++
Sbjct: 180 KEAYGKPVDIWACGVIL 196
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 23/197 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGC 147
LG+G F V R K+ G A K + K S + + E R+ ++H N+VRL
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 148 CSDGSQRLLVYEYMKNRSL--DLLI---YGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
S+ LV++ + L D++ Y E+D I I + + H +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-------HCIQQILESVNHCHLNG- 123
Query: 203 TRIVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQ-AYLSTNFAGTLGYTAPEYAI 258
IVHRD+K N+LL K + K+ DFGLA DQ A+ FAGT GY +PE
Sbjct: 124 --IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF--GFAGTPGYLSPEVLR 179
Query: 259 RGELSEKADIYSFGVLV 275
+ + D+++ GV++
Sbjct: 180 KDPYGKPVDMWACGVIL 196
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 29/220 (13%)
Query: 78 KKATKNFHPGNLLGRGGFGPVYRGKLADG-------TLVAVKKLCVDKSQQGESEFLSEV 130
K +NF +LG G +G V+ + G + +KK + + + +E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 131 RMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF----- 184
+++ I Q LV L ++ L+ +Y+ GE L+ RF
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYING--------GELFTHLSQRERFTEHEV 161
Query: 185 QIILG-IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243
QI +G I L++LH+ I++RDIK N+LLD + DFGL++ F D+ +
Sbjct: 162 QIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY 218
Query: 244 NFAGTLGYTAPEYAIRGELS---EKADIYSFGVLVLEIIS 280
+F GT+ Y AP+ +RG S + D +S GVL+ E+++
Sbjct: 219 DFCGTIEYMAPD-IVRGGDSGHDKAVDWWSLGVLMYELLT 257
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 12/199 (6%)
Query: 89 LLGRGGFGPVYRGK-LADGTLVAVK----KLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LLG+G FG V K A G A+K ++ V K + + L+E R++ + +H L
Sbjct: 158 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT--LTENRVLQNSRHPFLTA 215
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
L + V EY L + E F RF I L YLH S
Sbjct: 216 LKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARF-YGAEIVSALDYLH--SEK 271
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELS 263
+V+RD+K N++LD+ KI DFGL + +D A + T F GT Y APE +
Sbjct: 272 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDYG 330
Query: 264 EKADIYSFGVLVLEIISCR 282
D + GV++ E++ R
Sbjct: 331 RAVDWWGLGVVMYEMMCGR 349
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 38/229 (16%)
Query: 90 LGRGGFGP-VYRGKLADGTLVAVKKLCVDKSQQGES-EFLS---------------EVRM 132
+ + GP + R L +G+ VK K+QQ + +F+S E+
Sbjct: 3 ISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISY 62
Query: 133 ITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR--FQIILGI 190
+ ++H ++++L + + ++V EY D ++ E + R FQ I+
Sbjct: 63 LKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIV--EKKRMTEDEGRRFFQQIIC- 119
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
++Y H +IVHRD+K N+LLD+ KI DFGL+ D +L T+ G+
Sbjct: 120 --AIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIM-TDGNFLKTS-CGSPN 172
Query: 251 YTAPEYAIRGEL--SEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLP 297
Y APE I G+L + D++S G+++ ++ R LP + +++P
Sbjct: 173 YAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGR------LPFDDEFIP 214
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 23/197 (11%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHKNLVRLLGC 147
LG+G F V R K+ G A K + K S + + E R+ ++H N+VRL
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 148 CSDGSQRLLVYEYMKNRSL--DLLI---YGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
S+ LV++ + L D++ Y E+D I I + + H +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-------HCIQQILESVNHCHLNG- 123
Query: 203 TRIVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQ-AYLSTNFAGTLGYTAPEYAI 258
IVHRD+K N+LL K + K+ DFGLA DQ A+ FAGT GY +PE
Sbjct: 124 --IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF--GFAGTPGYLSPEVLR 179
Query: 259 RGELSEKADIYSFGVLV 275
+ + D+++ GV++
Sbjct: 180 KDPYGKPVDMWACGVIL 196
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 124/305 (40%), Gaps = 45/305 (14%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKL--CVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
+GRG +G V + G ++AVK++ VD+ +Q + +V M +S +V+ G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSS-DCPYIVQFYG 88
Query: 147 CCSDGSQRLLVYEYMKNRSLDLL---IYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
+ E M S D +Y D + +I L + L +L E +
Sbjct: 89 ALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE--NL 145
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPE----YAIR 259
+I+HRDIK SN+LLD K+ DFG++ + A T AG Y APE A R
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA--KTRDAGCRPYMAPERIDPSASR 203
Query: 260 GELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWK-LYERGRILELVDPRMR 318
++D++S G+ + E+ + R P W ++++ + DP
Sbjct: 204 QGYDVRSDVWSLGITLYELATGR-------------FPYPKWNSVFDQLTQVVKGDPPQL 250
Query: 319 KEGIVERDALQVINVAFICLQPHGNQRPPMSEI---------------VAMLTCKVESGI 363
+ IN +CL ++RP E+ VA CK+ +
Sbjct: 251 SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQM 310
Query: 364 PVRPA 368
P P+
Sbjct: 311 PATPS 315
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 12/199 (6%)
Query: 89 LLGRGGFGPVYRGK-LADGTLVAVK----KLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LLG+G FG V K A G A+K ++ V K + + L+E R++ + +H L
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT--LTENRVLQNSRHPFLTA 212
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
L + V EY L + E F RF I L YLH S
Sbjct: 213 LKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARF-YGAEIVSALDYLH--SEK 268
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELS 263
+V+RD+K N++LD+ KI DFGL + +D A + T F GT Y APE +
Sbjct: 269 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDYG 327
Query: 264 EKADIYSFGVLVLEIISCR 282
D + GV++ E++ R
Sbjct: 328 RAVDWWGLGVVMYEMMCGR 346
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 26/225 (11%)
Query: 73 DFQTLKKATKNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVR 131
D+ K+ + + P +++GRG V R A G AVK + V +++ E L EVR
Sbjct: 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEV-TAERLSPEQLEEVR 143
Query: 132 MITSIQ---------HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWST 182
T + H +++ L+ S LV++ M R +L Y L+
Sbjct: 144 EATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLM--RKGELFDYLTEKVALSEKE 201
Query: 183 RFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS 242
I+ + + +LH ++ IVHRD+K N+LLD+ Q ++ DFG + +
Sbjct: 202 TRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL-- 256
Query: 243 TNFAGTLGYTAPEYAIRGELSE-------KADIYSFGVLVLEIIS 280
GT GY APE ++ + E + D+++ GV++ +++
Sbjct: 257 RELCGTPGYLAPEI-LKCSMDETHPGYGKEVDLWACGVILFTLLA 300
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLC-VDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G G V++ LV +KL ++ ++ + E++++ +V G
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ + E+M SLD ++ + + ++ + + +GL YL E +I+HR
Sbjct: 136 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 191
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+K SN+L++ + + K+ DFG++ + A +F GT Y +PE S ++DI
Sbjct: 192 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQGTHYSVQSDI 248
Query: 269 YSFGVLVLEIISCR 282
+S G+ ++E+ R
Sbjct: 249 WSMGLSLVEMAVGR 262
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLC-VDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G G V++ LV +KL ++ ++ + E++++ +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ + E+M SLD ++ + + ++ + + +GL YL E +I+HR
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 129
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+K SN+L++ + + K+ DFG++ + A +F GT Y +PE S ++DI
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 269 YSFGVLVLEIISCR 282
+S G+ ++E+ R
Sbjct: 187 WSMGLSLVEMAVGR 200
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 10/194 (5%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
LG G FG V+R V V K + +E+ ++ + H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 150 DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRD 209
D + +L+ E++ L I E K ++ + + GL+++HE S IVH D
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMHEHS---IVHLD 174
Query: 210 IKASNVLLDEKFQS--KIGDFGLA-RFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKA 266
IK N++ + K S KI DFGLA + P++ ++T T + APE R +
Sbjct: 175 IKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPVGFYT 231
Query: 267 DIYSFGVLVLEIIS 280
D+++ GVL ++S
Sbjct: 232 DMWAIGVLGYVLLS 245
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLC-VDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G G V++ LV +KL ++ ++ + E++++ +V G
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ + E+M SLD ++ + + ++ + + +GL YL E +I+HR
Sbjct: 77 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 132
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+K SN+L++ + + K+ DFG++ ++ A F GT Y +PE S ++DI
Sbjct: 133 DVKPSNILVNSRGEIKLCDFGVSGQLIDEMA---NEFVGTRSYMSPERLQGTHYSVQSDI 189
Query: 269 YSFGVLVLEIISCR 282
+S G+ ++E+ R
Sbjct: 190 WSMGLSLVEMAVGR 203
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
Query: 110 AVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDL 168
AVK +DKS++ SE E+ ++ QH N++ L DG LV E M R +L
Sbjct: 56 AVK--VIDKSKRDPSE---EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELM--RGGEL 108
Query: 169 LIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVL-LDEKFQS---K 224
L KF + ++ I + ++YLH +VHRD+K SN+L +DE +
Sbjct: 109 LDKILRQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLR 165
Query: 225 IGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
I DFG A+ + L T T + APE R E DI+S G+L+ +++
Sbjct: 166 ICDFGFAKQLRAENGLLMTP-CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA 220
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 34/280 (12%)
Query: 83 NFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRM-ITSIQHKN 140
+ P LGRG +G V + + + G + AVK++ + Q + L ++ + ++
Sbjct: 35 DLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPF 94
Query: 141 LVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF--QIILGIARGLQYLH 198
V G + E + + SLD DK +I + I + L++LH
Sbjct: 95 TVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 153
Query: 199 EDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAI 258
S ++HRD+K SNVL++ Q K DFG++ + +D A AG Y APE I
Sbjct: 154 --SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVA--KDIDAGCKPYXAPE-RI 208
Query: 259 RGELSE-----KADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAW--KLYERGRILE 311
EL++ K+DI+S G+ +E+ R P +W + +++E
Sbjct: 209 NPELNQKGYSVKSDIWSLGITXIELAILR-------------FPYDSWGTPFQQLKQVVE 255
Query: 312 LVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEI 351
P++ ++ + + ++ CL+ + +RP E+
Sbjct: 256 EPSPQLP----ADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 30/210 (14%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI--QHKNLVRLLGC 147
+G+G +G V+RG L G VAVK S + E + E + ++ +H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIF----SSRDEQSWFRETEIYNTVLLRHDNILGFIAS 70
Query: 148 C----SDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQYLHED-- 200
+ +Q L+ Y ++ SL D L + L ++ + A GL +LH +
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVEIF 126
Query: 201 ---SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF---AGTLGYTAP 254
I HRD K+ NVL+ Q I D GLA + YL GT Y AP
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP 186
Query: 255 EY---AIRGELSEK---ADIYSFGVLVLEI 278
E IR + E DI++FG+++ EI
Sbjct: 187 EVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 78 KKATKNFHPGNLLGRGGFGPV--YRGKLADGTLVAVK----KLCVDKSQQGESEFLSEVR 131
K +F LLG+G FG V R K A G A+K ++ + K + + ++E R
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHT--VTESR 60
Query: 132 MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIA 191
++ + +H L L + V EY L + E F RF I
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGA-EIV 118
Query: 192 RGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGY 251
L+YLH +V+RDIK N++LD+ KI DFGL + D A + T F GT Y
Sbjct: 119 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEY 174
Query: 252 TAPEYAIRGELSEKADIYSFGVLVLEIISCR 282
APE + D + GV++ E++ R
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 25/215 (11%)
Query: 81 TKNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHK 139
+ +F +LLG G +G V G +VA+KK+ L E++++ +H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 140 NLVRLLGCCSDGS----QRLLVYEYMKNRSLDLLIYGE--SDKFLNWSTRFQIILGIARG 193
N++ + S + + + + L +I + SD + + I R
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRA 124
Query: 194 LQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS---------TN 244
++ LH + ++HRD+K SN+L++ K+ DFGLAR E A S T
Sbjct: 125 VKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 245 FAGTLGYTAPEYAI-RGELSEKADIYSFGVLVLEI 278
+ T Y APE + + S D++S G ++ E+
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLC-VDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G G V++ LV +KL ++ ++ + E++++ +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ + E+M SLD ++ + + ++ + + +GL YL E +I+HR
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 129
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+K SN+L++ + + K+ DFG++ + A +F GT Y +PE S ++DI
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 269 YSFGVLVLEIISCR 282
+S G+ ++E+ R
Sbjct: 187 WSMGLSLVEMAVGR 200
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 78 KKATKNFHPGNLLGRGGFGPV--YRGKLADGTLVAVK----KLCVDKSQQGESEFLSEVR 131
K +F LLG+G FG V R K A G A+K ++ + K + + ++E R
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHT--VTESR 57
Query: 132 MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIA 191
++ + +H L L + V EY L + E F RF I
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGA-EIV 115
Query: 192 RGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGY 251
L+YLH +V+RDIK N++LD+ KI DFGL + D A + T F GT Y
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEY 171
Query: 252 TAPEYAIRGELSEKADIYSFGVLVLEIISCR 282
APE + D + GV++ E++ R
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-T 248
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D Y+ A
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 249 LGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
L + APE + ++D++SFGVL+ EI S
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 140 NLVRLLGCCSD-GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR 183
N+V LLG C+ G +++ E+ K +L + + ++F+ + T+
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 136
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLC-VDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G G V++ LV +KL ++ ++ + E++++ +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ + E+M SLD ++ + + ++ + + +GL YL E +I+HR
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 129
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+K SN+L++ + + K+ DFG++ + A +F GT Y +PE S ++DI
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 269 YSFGVLVLEIISCR 282
+S G+ ++E+ R
Sbjct: 187 WSMGLSLVEMAVGR 200
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS-----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
++ + HKN++ LL + + Q + + + + +L +I E D +Q+
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
++GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 136 LVGI----KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYV 186
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E+I
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 78 KKATKNFHPGNLLGRGGFGPV--YRGKLADGTLVAVK----KLCVDKSQQGESEFLSEVR 131
K +F LLG+G FG V R K A G A+K ++ + K + + ++E R
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHT--VTESR 57
Query: 132 MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIA 191
++ + +H L L + V EY L + E F RF I
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGA-EIV 115
Query: 192 RGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGY 251
L+YLH +V+RDIK N++LD+ KI DFGL + D A + T F GT Y
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEY 171
Query: 252 TAPEYAIRGELSEKADIYSFGVLVLEIISCR 282
APE + D + GV++ E++ R
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
++ + HKN++ LL + + LV E M + +L +I E D +Q
Sbjct: 76 LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLYQ 134
Query: 186 IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
++ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 135 MLXGI----KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPY 185
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
++ + HKN++ LL + + LV E M + +L +I E D +Q
Sbjct: 76 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLYQ 134
Query: 186 IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
++ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 135 MLXGI----KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPY 185
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 14 TVLKRYQNLKP---IGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 68
Query: 132 MITSIQHKNLVRLLGCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
++ + HKN++ LL + + LV E M + +L +I E D +Q
Sbjct: 69 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLYQ 127
Query: 186 IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
++ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 128 MLXGI----KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPY 178
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E++
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-T 248
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D Y+ A
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 249 LGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
L + APE + ++D++SFGVL+ EI S
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 86
Query: 140 NLVRLLGCCSD-GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR 183
N+V LLG C+ G +++ E+ K +L + + ++F+ + T+
Sbjct: 87 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 131
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-T 248
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D Y+ A
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 249 LGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
L + APE + ++D++SFGVL+ EI S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 140 NLVRLLGCCSD-GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR 183
N+V LLG C+ G +++ E+ K +L + + ++F+ + T+
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 138
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLC-VDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G G V++ LV +KL ++ ++ + E++++ +V G
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ + E+M SLD ++ + + ++ + + +GL YL E +I+HR
Sbjct: 101 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 156
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+K SN+L++ + + K+ DFG++ + A +F GT Y +PE S ++DI
Sbjct: 157 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQGTHYSVQSDI 213
Query: 269 YSFGVLVLEIISCR 282
+S G+ ++E+ R
Sbjct: 214 WSMGLSLVEMAVGR 227
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
Query: 110 AVKKLCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDL 168
AVK +DKS++ SE E+ ++ QH N++ L DG LV E M R +L
Sbjct: 56 AVK--VIDKSKRDPSE---EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELM--RGGEL 108
Query: 169 LIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVL-LDEKFQS---K 224
L KF + ++ I + ++YLH +VHRD+K SN+L +DE +
Sbjct: 109 LDKILRQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLR 165
Query: 225 IGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
I DFG A+ + L T T + APE R E DI+S G+L+ +++
Sbjct: 166 ICDFGFAKQLRAENGLLMTP-CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 29/206 (14%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLS-----EVRMITSIQHKNLVR 143
+G G +G V G VA+KKL S+ +SE + E+ ++ +QH+N++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL----SRPFQSEIFAKRAYRELLLLKHMQHENVIG 87
Query: 144 LLGCCSDGSQR------LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYL 197
LL + S LV +M+ ++ S++ + + ++ + +GL+Y+
Sbjct: 88 LLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYI 142
Query: 198 HEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYA 257
H +VHRD+K N+ ++E + KI DFGLAR + T + T Y APE
Sbjct: 143 HSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEM----TGYVVTRWYRAPEVI 195
Query: 258 IRG-ELSEKADIYSFGVLVLEIISCR 282
+ ++ DI+S G ++ E+++ +
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG-T 248
+A+G+++L + + +HRD+ A N+LL EK KI DFGLAR +D Y+ A
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 249 LGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
L + APE + ++D++SFGVL+ EI S
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 87 GNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-QHK 139
G LGRG FG V K A VAVK L + +SE++++ I H
Sbjct: 25 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 84
Query: 140 NLVRLLGCCSD-GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR 183
N+V LLG C+ G +++ E+ K +L + + ++F+ + T+
Sbjct: 85 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 129
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
++ + HKN++ LL + + LV E M + +L +I E D +Q
Sbjct: 76 LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLYQ 134
Query: 186 IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
++ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 135 MLCGI----KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPY 185
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 83 NFHPGNLLGRGGFGPVYRGKL-ADGTLVAVKKL---CVDKSQQGESEFLSEVR-MITSIQ 137
+FH ++G+G FG V + A+ AVK L + K ++ E +SE ++ +++
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKE-EKHIMSERNVLLKNVK 97
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYL 197
H LV L + V +Y+ L + E FL RF IA L YL
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER-CFLEPRARFYAA-EIASALGYL 155
Query: 198 HEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYA 257
H IV+RD+K N+LLD + + DFGL + E + ST F GT Y APE
Sbjct: 156 HS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST-FCGTPEYLAPEVL 211
Query: 258 IRGELSEKADIYSFGVLVLEII 279
+ D + G ++ E++
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEML 233
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLC-VDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G G V++ LV +KL ++ ++ + E++++ +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ + E+M SLD ++ + + ++ + + +GL YL E +I+HR
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 129
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+K SN+L++ + + K+ DFG++ + A +F GT Y +PE S ++DI
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 269 YSFGVLVLEIISCR 282
+S G+ ++E+ R
Sbjct: 187 WSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLC-VDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G G V++ LV +KL ++ ++ + E++++ +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ + E+M SLD ++ + + ++ + + +GL YL E +I+HR
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 129
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+K SN+L++ + + K+ DFG++ + A +F GT Y +PE S ++DI
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 269 YSFGVLVLEIISCR 282
+S G+ ++E+ R
Sbjct: 187 WSMGLSLVEMAVGR 200
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 81 TKNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHK 139
+ +F +LLG G +G V G +VA+KK+ L E++++ +H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 140 NLVRLLGCCSDGS----QRLLVYEYMKNRSLDLLIYGE--SDKFLNWSTRFQIILGIARG 193
N++ + S + + + + L +I + SD + + I R
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRA 124
Query: 194 LQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS---------TN 244
++ LH + ++HRD+K SN+L++ K+ DFGLAR E A S
Sbjct: 125 VKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181
Query: 245 FAGTLGYTAPEYAI-RGELSEKADIYSFGVLVLEI 278
F T Y APE + + S D++S G ++ E+
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI-----QHKNLVR 143
++GRG + V +L + K+ V K + E + V+ + H LV
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKV-VKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
L C S+ V EY+ DL+ + + + L I+ L YLHE
Sbjct: 75 LHSCFQTESRLFFVIEYVNGG--DLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG-- 130
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLAR--FFPEDQAYLSTNFAGTLGYTAPEYAIRGE 261
I++RD+K NVLLD + K+ D+G+ + P D ++ F GT Y APE +RGE
Sbjct: 131 -IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNYIAPE-ILRGE 185
Query: 262 -LSEKADIYSFGVLVLEIISCRKNTDLTLPSE 292
D ++ GVL+ E+++ R D+ S+
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 217
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 18/219 (8%)
Query: 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI----- 136
++F ++GRG + V +L + K+ V K + E + V+ +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKV-VKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H LV L C S+ V EY+ DL+ + + + L I+ L Y
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGG--DLMFHMQRQRKLPEEHARFYSAEISLALNY 136
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR--FFPEDQAYLSTNFAGTLGYTAP 254
LHE I++RD+K NVLLD + K+ D+G+ + P D ++ F GT Y AP
Sbjct: 137 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNYIAP 190
Query: 255 EYAIRGE-LSEKADIYSFGVLVLEIISCRKNTDLTLPSE 292
E +RGE D ++ GVL+ E+++ R D+ S+
Sbjct: 191 E-ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 228
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 90 LGRGGFGPVY--RGKL--ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V + KL A+ + +KK V + + L EV ++ + H N+++L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGA-LLDEVAVLKQLDHPNIMKLY 87
Query: 146 GCCSDGSQRLLVYE-YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTR 204
D LV E Y D +I + ++ + + +L G YLH+ +
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLHKHN--- 141
Query: 205 IVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGE 261
IVHRD+K N+LL+ K + KI DFGL+ F E + GT Y APE +R +
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKERL-GTAYYIAPE-VLRKK 198
Query: 262 LSEKADIYSFGVLVLEIISC 281
EK D++S GV +L I+ C
Sbjct: 199 YDEKCDVWSCGV-ILYILLC 217
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 41/223 (18%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMIT-SIQHKNLVRLLGC 147
+LG G G V G VAVK++ +D L E++++T S H N++R
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRYY-- 75
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ-------IILGIARGLQYLHED 200
CS+ + R L Y ++ +L+L ES + + + Q ++ IA G+ +LH
Sbjct: 76 CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS- 133
Query: 201 SHTRIVHRDIKASNVLLD-------------EKFQSKIGDFGLARFFPEDQAYLSTNF-- 245
+I+HRD+K N+L+ E + I DFGL + Q+ TN
Sbjct: 134 --LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNN 191
Query: 246 -AGTLGYTAPE-------YAIRGELSEKADIYSFGVLVLEIIS 280
+GT G+ APE + L+ DI+S G + I+S
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 18/219 (8%)
Query: 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI----- 136
++F ++GRG + V +L + K+ V K + E + V+ +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKV-VKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H LV L C S+ V EY+ DL+ + + + L I+ L Y
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGG--DLMFHMQRQRKLPEEHARFYSAEISLALNY 121
Query: 197 LHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR--FFPEDQAYLSTNFAGTLGYTAP 254
LHE I++RD+K NVLLD + K+ D+G+ + P D ++ F GT Y AP
Sbjct: 122 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNYIAP 175
Query: 255 EYAIRGE-LSEKADIYSFGVLVLEIISCRKNTDLTLPSE 292
E +RGE D ++ GVL+ E+++ R D+ S+
Sbjct: 176 E-ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 213
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 29/206 (14%)
Query: 90 LGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLS-----EVRMITSIQHKNLVR 143
+G G +G V G VA+KKL S+ +SE + E+ ++ +QH+N++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL----SRPFQSEIFAKRAYRELLLLKHMQHENVIG 105
Query: 144 LLGCCSDGSQR------LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYL 197
LL + S LV +M+ ++ S++ + + ++ + +GL+Y+
Sbjct: 106 LLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYI 160
Query: 198 HEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYA 257
H +VHRD+K N+ ++E + KI DFGLAR + T + T Y APE
Sbjct: 161 HSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEM----TGYVVTRWYRAPEVI 213
Query: 258 IRG-ELSEKADIYSFGVLVLEIISCR 282
+ ++ DI+S G ++ E+++ +
Sbjct: 214 LSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS-----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
++ + HKN++ LL + + Q + + + + +L +I E D +Q+
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
+ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 136 LCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E+I
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 17/181 (9%)
Query: 106 GTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGCCS------DGSQRLLVY 158
G VAVKKL ++Q E+ ++ + HKN++ LL + + LV
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD 218
E M + +L +I+ E D +Q++ GI ++LH I+HRD+K SN+++
Sbjct: 107 ELM-DANLCQVIHMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVK 158
Query: 219 EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEI 278
KI DFGLAR + ++ T + T Y APE + E DI+S G ++ E+
Sbjct: 159 SDCTLKILDFGLARTASTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL 216
Query: 279 I 279
+
Sbjct: 217 V 217
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS-----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
++ + HKN++ LL + + Q + + + + +L +I E D +Q+
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
+ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 136 LCGI----KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYV 186
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E+I
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 15 TVLKRYQNLKP---IGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 69
Query: 132 MITSIQHKNLVRLLGCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
++ + HKN++ LL + + LV E M + +L +I E D +Q
Sbjct: 70 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQ 128
Query: 186 IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
++ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 129 MLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPY 179
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E++
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 32/237 (13%)
Query: 61 FFNGNLRTISYFDFQTLKKATKNFHPGNLLGRGGFGPV-YRGKLADGTLVAVKKLCVDKS 119
+F G++ I + ++K LG GGF V L DG A+K++ +
Sbjct: 18 YFQGHMVIIDNKHYLFIQK----------LGEGGFSYVDLVEGLHDGHFYALKRILCHE- 66
Query: 120 QQGESEFLSEVRMITSIQHKNLVRLLGCC----SDGSQRLLVYEYMKNRSLDLLIYGESD 175
QQ E E M H N++RL+ C + L+ + K +L I D
Sbjct: 67 QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKD 126
Query: 176 K--FLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFG---- 229
K FL ++LGI RGL+ +H + HRD+K +N+LL ++ Q + D G
Sbjct: 127 KGNFLTEDQILWLLLGICRGLEAIHAKGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQ 183
Query: 230 -LARFFPEDQAYLSTNFAG---TLGYTAPE-YAIRGE--LSEKADIYSFGVLVLEII 279
QA ++A T+ Y APE ++++ + E+ D++S G ++ ++
Sbjct: 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 34/212 (16%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI--QHKNLVRLLGC 147
+G+G +G V+RG G VAVK S + E + E + ++ +H+N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF----SSRDEKSWFRETELYNTVMLRHENILGFIA- 69
Query: 148 CSD------GSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQYLH-- 198
SD +Q L+ Y + SL D L D + +I+L IA GL +LH
Sbjct: 70 -SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIE 124
Query: 199 ---EDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF---AGTLGYT 252
I HRD+K+ N+L+ + Q I D GLA + L GT Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 253 APEY---AIRGELSE---KADIYSFGVLVLEI 278
APE I+ + + + DI++FG+++ E+
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYL-STNFAGT 248
+ARG+++L S + +HRD+ A N+LL E KI DFGLAR ++ Y+ +
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 249 LGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
L + APE S K+D++S+GVL+ EI S
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
Query: 72 FDFQTLKKATKNFHPGNLLGRGGFGPVYRG------KLADGTLVAVKKLCVDKSQQGESE 125
+D + A + G LGRG FG V + K VAVK L +
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKA 76
Query: 126 FLSEVRMITSI-QHKNLVRLLGCCS-DGSQRLLVYEYMKNRSLDLLIYGESDKFL 178
++E++++T I H N+V LLG C+ G +++ EY K +L + + D F
Sbjct: 77 LMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFF 131
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 37/219 (16%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMIT-SIQHKNLVRLLGC 147
+LG G G V G VAVK++ +D L E++++T S H N++R
Sbjct: 40 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRYY-- 93
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ-------IILGIARGLQYLHED 200
CS+ + R L Y ++ +L+L ES + + + Q ++ IA G+ +LH
Sbjct: 94 CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS- 151
Query: 201 SHTRIVHRDIKASNVLLD-------------EKFQSKIGDFGLARFFPEDQAYLSTNF-- 245
+I+HRD+K N+L+ E + I DFGL + Q N
Sbjct: 152 --LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 246 -AGTLGYTAPEY---AIRGELSEKADIYSFGVLVLEIIS 280
+GT G+ APE + + L+ DI+S G + I+S
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 37/219 (16%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMIT-SIQHKNLVRLLGC 147
+LG G G V G VAVK++ +D L E++++T S H N++R
Sbjct: 40 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRYY-- 93
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ-------IILGIARGLQYLHED 200
CS+ + R L Y ++ +L+L ES + + + Q ++ IA G+ +LH
Sbjct: 94 CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS- 151
Query: 201 SHTRIVHRDIKASNVLLD-------------EKFQSKIGDFGLARFFPEDQAYLSTNF-- 245
+I+HRD+K N+L+ E + I DFGL + Q N
Sbjct: 152 --LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 246 -AGTLGYTAPEY---AIRGELSEKADIYSFGVLVLEIIS 280
+GT G+ APE + + L+ DI+S G + I+S
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 34/212 (16%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI--QHKNLVRLLGC 147
+G+G +G V+RG G VAVK S + E + E + ++ +H+N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF----SSRDEKSWFRETELYNTVMLRHENILGFIA- 69
Query: 148 CSD------GSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQYLH-- 198
SD +Q L+ Y + SL D L D + +I+L IA GL +LH
Sbjct: 70 -SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIE 124
Query: 199 ---EDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF---AGTLGYT 252
I HRD+K+ N+L+ + Q I D GLA + L GT Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 253 APEY---AIRGELSE---KADIYSFGVLVLEI 278
APE I+ + + + DI++FG+++ E+
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 15 TVLKRYQNLKP---IGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 69
Query: 132 MITSIQHKNLVRLLGCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
++ + HKN++ LL + + LV E M + +L +I E D +Q
Sbjct: 70 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQ 128
Query: 186 IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
++ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 129 MLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPY 179
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E++
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 14 TVLKRYQNLKP---IGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 68
Query: 132 MITSIQHKNLVRLLGCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
++ + HKN++ LL + + LV E M + +L +I E D +Q
Sbjct: 69 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQ 127
Query: 186 IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
++ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 128 MLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPY 178
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E++
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 22 TVLKRYQNLKP---IGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 76
Query: 132 MITSIQHKNLVRLLGCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
++ + HKN++ LL + + LV E M + +L +I E D +Q
Sbjct: 77 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQ 135
Query: 186 IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
++ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 136 MLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPY 186
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E++
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
++ + HKN++ LL + + LV E M + +L +I E D +Q
Sbjct: 76 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQ 134
Query: 186 IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
++ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 135 MLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPY 185
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
++ + HKN++ LL + + LV E M + +L +I E D +Q
Sbjct: 76 LMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQ 134
Query: 186 IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
++ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 135 MLCGI----KHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPY 185
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 20 TVLKRYQNLKP---IGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 74
Query: 132 MITSIQHKNLVRLLGCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
++ + HKN++ LL + + LV E M + +L +I E D +Q
Sbjct: 75 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQ 133
Query: 186 IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
++ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 134 MLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPY 184
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E++
Sbjct: 185 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS-----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
++ + HKN++ LL + + Q + + + + +L +I E D +Q+
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
+ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 136 LCGI----KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYV 186
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E+I
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 81
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ +VY + + +Y + + +I + R L Y+H
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 201 SHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD + K+ DFG A+ + +S + Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 196
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 197 ATDYTSSIDVWSAGCVLAELL 217
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
++ + HKN++ LL + + LV E M + +L +I E D +Q
Sbjct: 76 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQ 134
Query: 186 IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
++ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 135 MLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPY 185
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLC-VDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LG G G V++ LV +KL ++ ++ + E++++ +V G
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHR 208
+ + E+M SLD ++ + + ++ + + +GL YL E +I+HR
Sbjct: 93 YSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHR 148
Query: 209 DIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
D+K SN+L++ + + K+ DFG++ + A +F GT Y +PE S ++DI
Sbjct: 149 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMSPERLQGTHYSVQSDI 205
Query: 269 YSFGVLVLEIISCR 282
+S G+ ++E+ R
Sbjct: 206 WSMGLSLVEMAVGR 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 59 TVLKRYQNLKP---IGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 113
Query: 132 MITSIQHKNLVRLLGCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
++ + HKN++ LL + + LV E M + +L +I E D +Q
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQ 172
Query: 186 IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
++ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 173 MLCGI----KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPY 223
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E++
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 94
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 154
Query: 201 SHTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD K+ DFG A+ + +S + + Y APE
Sbjct: 155 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFG 209
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 210 ATDYTSSIDVWSAGCVLAELL 230
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 34/212 (16%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI--QHKNLVRLLGC 147
+G+G +G V+RG G VAVK S + E + E + ++ +H+N++ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIF----SSRDEKSWFRETELYNTVMLRHENILGFIA- 98
Query: 148 CSD------GSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQYLH-- 198
SD +Q L+ Y + SL D L D + +I+L IA GL +LH
Sbjct: 99 -SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIE 153
Query: 199 ---EDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF---AGTLGYT 252
I HRD+K+ N+L+ + Q I D GLA + L GT Y
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 253 APEY---AIRGELSE---KADIYSFGVLVLEI 278
APE I+ + + + DI++FG+++ E+
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 22 TVLKRYQNLKP---IGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 76
Query: 132 MITSIQHKNLVRLLGCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
++ + HKN++ LL + + LV E M + +L +I E D +Q
Sbjct: 77 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQ 135
Query: 186 IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
++ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 136 MLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPY 186
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E++
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 16/218 (7%)
Query: 82 KNFHPGNLLGRGGFGPVYRGKLADGTLV----AVKKLCVDKSQQGESEFLSEVRMITSIQ 137
++F ++GRG + V +L + VKK V+ + + + +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYL 197
H LV L C S+ V EY+ DL+ + + + L I+ L YL
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGG--DLMFHMQRQRKLPEEHARFYSAEISLALNYL 169
Query: 198 HEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLAR--FFPEDQAYLSTNFAGTLGYTAPE 255
HE I++RD+K NVLLD + K+ D+G+ + P D ++ F GT Y APE
Sbjct: 170 HERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSTFCGTPNYIAPE 223
Query: 256 YAIRGE-LSEKADIYSFGVLVLEIISCRKNTDLTLPSE 292
+RGE D ++ GVL+ E+++ R D+ S+
Sbjct: 224 -ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 260
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 115
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 201 SHTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD K+ DFG A+ + +S + + Y APE
Sbjct: 176 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFG 230
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 231 ATDYTSSIDVWSAGCVLAELL 251
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 117
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 177
Query: 201 SHTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD K+ DFG A+ + +S + + Y APE
Sbjct: 178 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFG 232
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 233 ATDYTSSIDVWSAGCVLAELL 253
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 45/287 (15%)
Query: 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGE-SEFLSEVRMITSIQHKNLVRLL 145
G L+G+G FG VY G+ VA++ + +++ + + F EV +H+N+V +
Sbjct: 38 GELIGKGRFGQVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
G C ++ K R+L ++ ++ L+ + QI I +G+ YLH I
Sbjct: 96 GACMSPPHLAIITSLCKGRTLYSVVR-DAKIVLDVNKTRQIAQEIVKGMGYLHAKG---I 151
Query: 206 VHRDIKASNVLLDEKFQSKIGDFGLARFFP-------EDQAYLSTNFAGTLGYTAPEYAI 258
+H+D+K+ NV D + I DFGL ED+ + G L + APE I
Sbjct: 152 LHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQN---GWLCHLAPEI-I 206
Query: 259 RG----------ELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGR 308
R S+ +D+++ G + E + R+ T P+E +++ G
Sbjct: 207 RQLSPDTEEDKLPFSKHSDVFALGTIWYE-LHAREWPFKTQPAEA--------IIWQMGT 257
Query: 309 ILELVDPRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIVAML 355
++ P + + G+ ++ ++ C +RP ++++ ML
Sbjct: 258 GMK---PNLSQIGM----GKEISDILLFCWAFEQEERPTFTKLMDML 297
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 81
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 201 SHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD + K+ DFG A+ + +S + + Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFG 196
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 197 ATDYTSSIDVWSAGCVLAELL 217
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 90 LGRGGFGPVY--RGKL--ADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G +G V + KL A+ + +KK V + + L EV ++ + H N+++L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGA-LLDEVAVLKQLDHPNIMKLY 70
Query: 146 GCCSDGSQRLLVYE-YMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTR 204
D LV E Y D +I + ++ + I+ + G YLH+ +
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGTTYLHKHN--- 124
Query: 205 IVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGE 261
IVHRD+K N+LL+ K + KI DFGL+ F E + GT Y APE +R +
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKERL-GTAYYIAPE-VLRKK 181
Query: 262 LSEKADIYSFGVLVLEIISC 281
EK D++S GV +L I+ C
Sbjct: 182 YDEKCDVWSCGV-ILYILLC 200
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 59 TVLKRYQNLKP---IGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 113
Query: 132 MITSIQHKNLVRLLGCCS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ 185
++ + HKN++ LL + + LV E M + +L +I E D +Q
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQ 172
Query: 186 IILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNF 245
++ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 173 MLCGI----KHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPY 223
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E++
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 109
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 169
Query: 201 SHTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD K+ DFG A+ + +S + + Y APE
Sbjct: 170 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFG 224
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 225 ATDYTSSIDVWSAGCVLAELL 245
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 119
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 179
Query: 201 SHTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD K+ DFG A+ + +S + + Y APE
Sbjct: 180 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFG 234
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 235 ATDYTSSIDVWSAGCVLAELL 255
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 89 LLGRGGFGPVYRGKLAD--GT--LVAVKKLCVDKSQQGESE--FLSEVRMITSIQHKNLV 142
+LG+G FG V LAD GT L A+K L D Q + + E R++ + +
Sbjct: 26 VLGKGSFGKVM---LADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFL 82
Query: 143 RLLGCCSDGSQRL-LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDS 201
L C RL V EY+ L I + KF F I+ GL +LH+
Sbjct: 83 TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ-QVGKFKEPQAVF-YAAEISIGLFFLHKRG 140
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGE 261
I++RD+K NV+LD + KI DFG+ + D + F GT Y APE
Sbjct: 141 ---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD-GVTTREFCGTPDYIAPEIIAYQP 196
Query: 262 LSEKADIYSFGVLVLEIISCRKNTD 286
+ D +++GVL+ E+++ + D
Sbjct: 197 YGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS-----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
++ + HKN++ LL + + Q + + + + +L +I E D +Q+
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
+ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 136 LCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E+I
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS-----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
++ + HKN++ LL + + Q + + + + +L +I E D +Q+
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
+ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 136 LCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 186
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E+I
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 22 TVLKRYQNLKP---IGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYRELV 76
Query: 132 MITSIQHKNLVRLLGCCS-----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
++ + HKN++ LL + + Q + + + + +L +I E D +Q+
Sbjct: 77 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
+ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 137 LCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 187
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E+I
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 86
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 146
Query: 201 SHTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD K+ DFG A+ + +S + + Y APE
Sbjct: 147 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFG 201
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 202 ATDYTSSIDVWSAGCVLAELL 222
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 81 TKNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHK 139
+ +F +LLG G +G V G +VA+KK+ L E++++ +H+
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 140 NLVRLLGCCSDGS----QRLLVYEYMKNRSLDLLIYGE--SDKFLNWSTRFQIILGIARG 193
N++ + S + + + + L +I + SD + + I R
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLRA 124
Query: 194 LQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS---------TN 244
++ LH + ++HRD+K SN+L++ K+ DFGLAR E A S T
Sbjct: 125 VKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 245 FAGTLGYTAPEYAI-RGELSEKADIYSFGVLVLEI 278
T Y APE + + S D++S G ++ E+
Sbjct: 182 XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 12/199 (6%)
Query: 89 LLGRGGFGPVYRGK-LADGTLVAVK----KLCVDKSQQGESEFLSEVRMITSIQHKNLVR 143
LLG+G FG V K A G A+K ++ V K + + L+E R++ + +H L
Sbjct: 17 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT--LTENRVLQNSRHPFLTA 74
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHT 203
L + V EY L + E F RF I L YLH S
Sbjct: 75 LKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARF-YGAEIVSALDYLH--SEK 130
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELS 263
+V+RD+K N++LD+ KI DFGL + +D A + F GT Y APE +
Sbjct: 131 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLAPEVLEDNDYG 189
Query: 264 EKADIYSFGVLVLEIISCR 282
D + GV++ E++ R
Sbjct: 190 RAVDWWGLGVVMYEMMCGR 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 76 TLKKATKN-FHPGNLLGRGGFGPVYRGK-LADGTLVAVK----KLCVDKSQQGESEFLSE 129
+ + T N F LLG+G FG V K A G A+K ++ V K + + L+E
Sbjct: 2 AMARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT--LTE 59
Query: 130 VRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG 189
R++ + +H L L + V EY L + E F RF
Sbjct: 60 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARF-YGAE 117
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL 249
I L YLH S +V+RD+K N++LD+ KI DFGL + +D A + F GT
Sbjct: 118 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTP 174
Query: 250 GYTAPEYAIRGELSEKADIYSFGVLVLEIISCR 282
Y APE + D + GV++ E++ R
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 160
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 220
Query: 201 SHTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD K+ DFG A+ + +S + + Y APE
Sbjct: 221 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFG 275
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 276 ATDYTSSIDVWSAGCVLAELL 296
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 86/193 (44%), Gaps = 10/193 (5%)
Query: 90 LGRGGFGPVYRGKLADGTL-VAVKKLCVDKSQQGESE-FLSEVRMITSIQHKNLVRLLGC 147
+GRG F VY+G + T+ VA +L K + E + F E + +QH N+VR
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 148 --CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
+ ++ +V S L Y + K I +GLQ+LH + I
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPP-I 152
Query: 206 VHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSE 264
+HRD+K N+ + S KIGD GLA +A + GT + APE + E
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPE-XYEEKYDE 208
Query: 265 KADIYSFGVLVLE 277
D+Y+FG LE
Sbjct: 209 SVDVYAFGXCXLE 221
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 78 KKATKNFHPGNLLGRGGFGPV--YRGKLADGTLVAVK----KLCVDKSQQGESEFLSEVR 131
K +F LLG+G FG V R K A G A+K ++ + K + + ++E R
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHT--VTESR 62
Query: 132 MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIA 191
++ + +H L L + V EY L + E F RF I
Sbjct: 63 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGA-EIV 120
Query: 192 RGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGY 251
L+YLH +V+RDIK N++LD+ KI DFGL + D A + F GT Y
Sbjct: 121 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEY 176
Query: 252 TAPEYAIRGELSEKADIYSFGVLVLEIISCR 282
APE + D + GV++ E++ R
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 89/200 (44%), Gaps = 12/200 (6%)
Query: 88 NLLGRGGFGPVYRGK-LADGTLVAVK----KLCVDKSQQGESEFLSEVRMITSIQHKNLV 142
LLG+G FG V K A G A+K ++ V K + + L+E R++ + +H L
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT--LTENRVLQNSRHPFLT 71
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
L + V EY L + E F RF I L YLH S
Sbjct: 72 ALKYSFQTHDRLCFVMEYANGGELFFHLSRER-VFSEDRARF-YGAEIVSALDYLH--SE 127
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGEL 262
+V+RD+K N++LD+ KI DFGL + +D A + F GT Y APE +
Sbjct: 128 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYLAPEVLEDNDY 186
Query: 263 SEKADIYSFGVLVLEIISCR 282
D + GV++ E++ R
Sbjct: 187 GRAVDWWGLGVVMYEMMCGR 206
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 78 KKATKNFHPGNLLGRGGFGPV--YRGKLADGTLVAVK----KLCVDKSQQGESEFLSEVR 131
K +F LLG+G FG V R K A G A+K ++ + K + + ++E R
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHT--VTESR 57
Query: 132 MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIA 191
++ + +H L L + V EY L + E F RF I
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGA-EIV 115
Query: 192 RGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGY 251
L+YLH +V+RDIK N++LD+ KI DFGL + D A + F GT Y
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEY 171
Query: 252 TAPEYAIRGELSEKADIYSFGVLVLEIISCR 282
APE + D + GV++ E++ R
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 24/217 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 26 TVLKRYQNLKP---IGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYRELV 80
Query: 132 MITSIQHKNLVRLLGCCS-----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
++ + HKN++ LL + + Q + + + + +L +I E D +Q+
Sbjct: 81 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 140
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
+ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 141 LCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 191
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRK 283
T Y APE + E D++S G ++ E++ C K
Sbjct: 192 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV-CHK 227
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 78 KKATKNFHPGNLLGRGGFGPV--YRGKLADGTLVAVK----KLCVDKSQQGESEFLSEVR 131
K +F LLG+G FG V R K A G A+K ++ + K + + ++E R
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHT--VTESR 57
Query: 132 MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIA 191
++ + +H L L + V EY L + E F RF I
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGA-EIV 115
Query: 192 RGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGY 251
L+YLH +V+RDIK N++LD+ KI DFGL + D A + F GT Y
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEY 171
Query: 252 TAPEYAIRGELSEKADIYSFGVLVLEIISCR 282
APE + D + GV++ E++ R
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 23 TVLKRYQNLKP---IGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYRELV 77
Query: 132 MITSIQHKNLVRLLGCCS-----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
++ + HKN++ LL + + Q + + + + +L +I E D +Q+
Sbjct: 78 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 137
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
+ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ F
Sbjct: 138 LCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFV 188
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E+I
Sbjct: 189 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 221
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 20/192 (10%)
Query: 103 LADGTLVAVKKLCVDKSQQGESEFLSEVRM-------ITSIQ----HKNLVRLLGCCSDG 151
L +G+ +K KS Q + + RM IT+++ H N+V+L D
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQ 78
Query: 152 SQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIK 211
LV E + L I + K + + I+ + + ++H+ +VHRD+K
Sbjct: 79 LHTFLVMELLNGGELFERI--KKKKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLK 133
Query: 212 ASNVLL---DEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADI 268
N+L ++ + KI DFG AR P D L T TL Y APE + E D+
Sbjct: 134 PENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP-CFTLHYAAPELLNQNGYDESCDL 192
Query: 269 YSFGVLVLEIIS 280
+S GV++ ++S
Sbjct: 193 WSLGVILYTMLS 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 78 KKATKNFHPGNLLGRGGFGPV--YRGKLADGTLVAVK----KLCVDKSQQGESEFLSEVR 131
K +F LLG+G FG V R K A G A+K ++ + K + + ++E R
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHT--VTESR 57
Query: 132 MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIA 191
++ + +H L L + V EY L + E F RF I
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-VFTEERARFYGA-EIV 115
Query: 192 RGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGY 251
L+YLH +V+RDIK N++LD+ KI DFGL + D A + F GT Y
Sbjct: 116 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEY 171
Query: 252 TAPEYAIRGELSEKADIYSFGVLVLEIISCR 282
APE + D + GV++ E++ R
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 24/217 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 15 TVLKRYQNLKP---IGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYRELV 69
Query: 132 MITSIQHKNLVRLLGCCS-----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
++ + HKN++ LL + + Q + + + + +L +I E D +Q+
Sbjct: 70 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
+ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T +
Sbjct: 130 LCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYV 180
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRK 283
T Y APE + E D++S G ++ E++ C K
Sbjct: 181 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV-CHK 216
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 19/209 (9%)
Query: 83 NFHPGNLLGRGGFGPVYR------GKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI 136
++ G LG G F V + GK + ++L + E EV ++ I
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQ 195
+H N++ L + + +L+ E + L D L ES L Q + I G+
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVH 129
Query: 196 YLHEDSHTRIVHRDIKASNVLLDEKF----QSKIGDFGLARFFPEDQAYLSTNFAGTLGY 251
YLH RI H D+K N++L +K + K+ DFG+A + N GT +
Sbjct: 130 YLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEF 184
Query: 252 TAPEYAIRGELSEKADIYSFGVLVLEIIS 280
APE L +AD++S GV+ ++S
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 88 NLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
++LG+G V+RG+ G L A+K + + E ++ + HKN+V+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 147 CCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIIL-GIARGLQYLHEDSHT 203
+ + R +L+ E+ SL ++ S+ + + F I+L + G+ +L E+
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-- 132
Query: 204 RIVHRDIKASNVL--LDEKFQS--KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
IVHR+IK N++ + E QS K+ DFG AR +D+ ++S GT Y P+ R
Sbjct: 133 -IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMYER 189
Query: 260 GELSE--------KADIYSFGV 273
L + D++S GV
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGV 211
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 29/213 (13%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL---- 144
LG GG G V+ D VA+KK+ + Q + L E+++I + H N+V++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHA-LREIKIIRRLDHDNIVKVFEIL 77
Query: 145 ----------LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
+G ++ + +V EYM+ ++L E L R + + RGL
Sbjct: 78 GPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL---EQGPLLEEHARL-FMYQLLRGL 133
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFP---EDQAYLSTNFAGTLG 250
+Y+H ++HRD+K +N+ ++ E KIGDFGLAR + +LS T
Sbjct: 134 KYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKW 189
Query: 251 YTAPEYAIRGELSEKA-DIYSFGVLVLEIISCR 282
Y +P + KA D+++ G + E+++ +
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ QG++ E++++ + H N+VRL
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVL-----QGKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 201 SHTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD K+ DFG A+ + +S + + Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFG 196
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 197 ATDYTSSIDVWSAGCVLAELL 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 19/209 (9%)
Query: 83 NFHPGNLLGRGGFGPVYR------GKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSI 136
++ G LG G F V + GK + ++L + E EV ++ I
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 137 QHKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQ 195
+H N++ L + + +L+ E + L D L ES L Q + I G+
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVH 122
Query: 196 YLHEDSHTRIVHRDIKASNVLLDEKF----QSKIGDFGLARFFPEDQAYLSTNFAGTLGY 251
YLH RI H D+K N++L +K + K+ DFG+A + N GT +
Sbjct: 123 YLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEF 177
Query: 252 TAPEYAIRGELSEKADIYSFGVLVLEIIS 280
APE L +AD++S GV+ ++S
Sbjct: 178 VAPEIVNYEPLGLEADMWSIGVITYILLS 206
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 100
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 160
Query: 201 SHTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD K+ DFG A+ + +S + Y APE
Sbjct: 161 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 215
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 216 ATDYTSSIDVWSAGCVLAELL 236
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 120/278 (43%), Gaps = 43/278 (15%)
Query: 87 GNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK----SQQGESEFLS-EVRMITSIQ--- 137
G LLG+GGFG V+ G +L D VA+K + ++ S +S EV ++ +
Sbjct: 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGG 95
Query: 138 -HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H ++RLL +LV E + DL Y L + +Q+
Sbjct: 96 GHPGVIRLLDWFETQEGFMLVLE-RPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQH 154
Query: 197 LHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPE 255
H +VHRDIK N+L+D + +K+ DFG D+ Y T+F GT Y+ PE
Sbjct: 155 CHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEPY--TDFDGTRVYSPPE 208
Query: 256 YAIRGELSE-KADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYERGRILELVD 314
+ R + A ++S G+L+ +++ D+ +ER + E+++
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVC----GDIP---------------FERDQ--EILE 247
Query: 315 PRMRKEGIVERDALQVINVAFICLQPHGNQRPPMSEIV 352
+ V D +I CL P + RP + EI+
Sbjct: 248 AELHFPAHVSPDCCALIRR---CLAPKPSSRPSLEEIL 282
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ QG++ E++++ + H N+VRL
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVL-----QGKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 201 SHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD + K+ DFG A+ + +S + + Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YICSRYYRAPELIFG 196
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 197 ATDYTSSIDVWSAGCVLAELL 217
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 89
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 149
Query: 201 SHTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD K+ DFG A+ + +S + Y APE
Sbjct: 150 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 204
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 205 ATDYTSSIDVWSAGCVLAELL 225
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 17/181 (9%)
Query: 106 GTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGCCS------DGSQRLLVY 158
G VAVKKL ++Q E+ ++ + HKN++ LL + + LV
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 159 EYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLD 218
E M + +L +I+ E D +Q++ GI ++LH I+HRD+K SN+++
Sbjct: 109 ELM-DANLCQVIHMELDHERMSYLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVK 160
Query: 219 EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEI 278
KI DFGLAR + ++ T + T Y APE + + DI+S G ++ E+
Sbjct: 161 SDCTLKILDFGLARTACTN--FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGEL 218
Query: 279 I 279
+
Sbjct: 219 V 219
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 21/218 (9%)
Query: 74 FQTLKKATKNFHPGNLLGRGGFGPVYR------GKLADGTLVAVKKLCVDKSQQGESEFL 127
FQ++ ++ G LG G F V + GK + ++L + E
Sbjct: 20 FQSM--VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE 77
Query: 128 SEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQI 186
EV ++ I+H N++ L + + +L+ E + L D L ES L Q
Sbjct: 78 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQF 134
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKF----QSKIGDFGLARFFPEDQAYLS 242
+ I G+ YLH RI H D+K N++L +K + K+ DFG+A +
Sbjct: 135 LKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF-- 189
Query: 243 TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
N GT + APE L +AD++S GV+ ++S
Sbjct: 190 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 227
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 81
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 201 SHTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD K+ DFG A+ + +S + Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 196
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 197 ATDYTSSIDVWSAGCVLAELL 217
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 93
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 201 SHTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD K+ DFG A+ + +S + Y APE
Sbjct: 154 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 208
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 209 ATDYTSSIDVWSAGCVLAELL 229
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 16/171 (9%)
Query: 116 VDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGE 173
+DKS++ +E E+ ++ QH N++ L DG +V E MK L D ++
Sbjct: 55 IDKSKRDPTE---EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL--- 108
Query: 174 SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVL-LDEKFQS---KIGDFG 229
KF + ++ I + ++YLH +VHRD+K SN+L +DE +I DFG
Sbjct: 109 RQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFG 165
Query: 230 LARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
A+ + L T T + APE R DI+S GVL+ +++
Sbjct: 166 FAKQLRAENGLLMTP-CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLT 215
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 81
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 201 SHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD + K+ DFG A+ + +S + Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 196
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 197 ATDYTSSIDVWSAGCVLAELL 217
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 115
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 201 SHTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD K+ DFG A+ + +S + Y APE
Sbjct: 176 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 230
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 231 ATDYTSSIDVWSAGCVLAELL 251
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 12/150 (8%)
Query: 129 EVRMITSIQHKNLVRLLGCCSDGSQRLL--VYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
E+ ++ + H N+V+L+ D ++ L V+E + + + + K L+
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLKPLSEDQARFY 142
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
+ +G++YLH + +I+HRDIK SN+L+ E KI DFG++ F A LS N
Sbjct: 143 FQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLS-NTV 198
Query: 247 GTLGYTAPE--YAIRGELSEKA-DIYSFGV 273
GT + APE R S KA D+++ GV
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGV 228
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Query: 185 QIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTN 244
++ + I + L YL E ++HRD+K SN+LLDE+ Q K+ DFG++ +D+A
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA--KDR 183
Query: 245 FAGTLGYTAPEY-----AIRGELSEKADIYSFGVLVLEIIS 280
AG Y APE + + +AD++S G+ ++E+ +
Sbjct: 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELAT 224
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 82
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 142
Query: 201 SHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD + K+ DFG A+ + +S + Y APE
Sbjct: 143 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 197
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 198 ATDYTSSIDVWSAGCVLAELL 218
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 93
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 201 SHTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD K+ DFG A+ + +S + Y APE
Sbjct: 154 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 208
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 209 ATDYTSSIDVWSAGCVLAELL 229
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ DK + E++++ + H N+VRL
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNIVRLRYF 85
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 145
Query: 201 SHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD + K+ DFG A+ + +S + Y APE
Sbjct: 146 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 200
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 201 ATDYTSSIDVWSAGCVLAELL 221
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 41/223 (18%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMIT-SIQHKNLVRLLGC 147
+LG G G V G VAVK++ +D L E++++T S H N++R
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRYY-- 75
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQ-------IILGIARGLQYLHED 200
CS+ + R L Y ++ +L+L ES + + + Q ++ IA G+ +LH
Sbjct: 76 CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS- 133
Query: 201 SHTRIVHRDIKASNVLLD-------------EKFQSKIGDFGLARFFPEDQAYLSTNF-- 245
+I+HRD+K N+L+ E + I DFGL + Q N
Sbjct: 134 --LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 191
Query: 246 -AGTLGYTAPE-------YAIRGELSEKADIYSFGVLVLEIIS 280
+GT G+ APE + L+ DI+S G + I+S
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 89 LLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRL-LG 146
++G G FG VY+ KL D G LVA+KK+ QG++ E++++ + H N+VRL
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVL-----QGKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII------LGIARGLQYLHED 200
S G ++ VY + + +Y + + +I + R L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 201 SHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
I HRDIK N+LLD + K+ DFG A+ + +S + Y APE
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELIFG 196
Query: 260 G-ELSEKADIYSFGVLVLEII 279
+ + D++S G ++ E++
Sbjct: 197 ATDYTSSIDVWSAGCVLAELL 217
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 19/160 (11%)
Query: 125 EFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGES----DKFLNW 180
+F +E+++IT I+++ + G ++ + ++YEYM+N S+ L + E DK
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI--LKFDEYFFVLDKNYTC 146
Query: 181 STRFQIILGIARGL----QYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPE 236
Q+I I + + Y+H + + I HRD+K SN+L+D+ + K+ DFG + + +
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMVD 204
Query: 237 DQAYLSTNFAGTLGYTAPEYAIRGELS---EKADIYSFGV 273
+ S GT + PE+ E S K DI+S G+
Sbjct: 205 KKIKGS---RGTYEFMPPEF-FSNESSYNGAKVDIWSLGI 240
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 103/249 (41%), Gaps = 22/249 (8%)
Query: 38 KFNKAK--ELVRLALRTTKEGVSKDFFNGNLRTISYFDFQTLKKATKNFHPGNLLGRGGF 95
KF +AK + + T +SK NGN + DF L +LG+G F
Sbjct: 305 KFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLM----------VLGKGSF 354
Query: 96 GPVYRG-KLADGTLVAVKKLCVDKSQQGESE--FLSEVRMITSIQHKNLVRLLGCCSDGS 152
G V + L AVK L D Q + + E R++ + L C
Sbjct: 355 GKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM 414
Query: 153 QRL-LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIK 211
RL V EY+ L I + +F F IA GL +L I++RD+K
Sbjct: 415 DRLYFVMEYVNGGDLMYHIQ-QVGRFKEPHAVF-YAAEIAIGLFFLQSKG---IIYRDLK 469
Query: 212 ASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSF 271
NV+LD + KI DFG+ + D + F GT Y APE + D ++F
Sbjct: 470 LDNVMLDSEGHIKIADFGMCKENIWD-GVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 528
Query: 272 GVLVLEIIS 280
GVL+ E+++
Sbjct: 529 GVLLYEMLA 537
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 89 LLGRGGFGPVYRG-KLADGTLVAVKKLCVDK--SQQGES--EFLSEVRMITSIQHKNLVR 143
++G+G F V R G AVK + V K S G S + E + ++H ++V
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF--QIILGIARGLQYLHEDS 201
LL S +V+E+M L I +D +S + I L+Y H+++
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 202 HTRIVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAI 258
I+HRD+K VLL K S K+G FG+A E ++ GT + APE
Sbjct: 151 ---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE-SGLVAGGRVGTPHFMAPEVVK 206
Query: 259 RGELSEKADIYSFGVLVLEIIS 280
R + D++ GV++ ++S
Sbjct: 207 REPYGKPVDVWGCGVILFILLS 228
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS-----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
++ + HKN++ LL + + Q + + + + +L +I E D +Q+
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
+ GI ++LH I+HRD+K SN+++ KI DFGLAR +++ T
Sbjct: 136 LCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEV 186
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
T Y APE + E DI+S G ++ E+I
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 89 LLGRGGFGPVYRG-KLADGTLVAVKKLCVDK--SQQGES--EFLSEVRMITSIQHKNLVR 143
++G+G F V R G AVK + V K S G S + E + ++H ++V
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 144 LLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF--QIILGIARGLQYLHEDS 201
LL S +V+E+M L I +D +S + I L+Y H+++
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 152
Query: 202 HTRIVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAI 258
I+HRD+K VLL K S K+G FG+A E ++ GT + APE
Sbjct: 153 ---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE-SGLVAGGRVGTPHFMAPEVVK 208
Query: 259 RGELSEKADIYSFGVLVLEIIS 280
R + D++ GV++ ++S
Sbjct: 209 REPYGKPVDVWGCGVILFILLS 230
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 40/215 (18%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFL-SEVRMITSIQHKNLVRLLGCC 148
+G+G FG V+RGK G VAVK + S++ S F +E+ ++H+N++ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 149 SDG----SQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLHE 199
+ +Q LV +Y ++ SL +LN T ++ L A GL +LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLF--------DYLNRYTVTVEGMIKLALSTASGLAHLHM 119
Query: 200 D-----SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA-----GTL 249
+ I HRD+K+ N+L+ + I D GLA D A + + A GT
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 177
Query: 250 GYTAPEYAIRG------ELSEKADIYSFGVLVLEI 278
Y APE E ++ADIY+ G++ EI
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 40/215 (18%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFL-SEVRMITSIQHKNLVRLLGCC 148
+G+G FG V+RGK G VAVK + S++ S F +E+ ++H+N++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 149 SDG----SQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLHE 199
+ +Q LV +Y ++ SL +LN T ++ L A GL +LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLF--------DYLNRYTVTVEGMIKLALSTASGLAHLHM 118
Query: 200 D-----SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA-----GTL 249
+ I HRD+K+ N+L+ + I D GLA D A + + A GT
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 176
Query: 250 GYTAPEYAIRG------ELSEKADIYSFGVLVLEI 278
Y APE E ++ADIY+ G++ EI
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 40/215 (18%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFL-SEVRMITSIQHKNLVRLLGCC 148
+G+G FG V+RGK G VAVK + S++ S F +E+ ++H+N++ +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 149 SDG----SQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLHE 199
+ +Q LV +Y ++ SL +LN T ++ L A GL +LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLF--------DYLNRYTVTVEGMIKLALSTASGLAHLHM 157
Query: 200 D-----SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA-----GTL 249
+ I HRD+K+ N+L+ + I D GLA D A + + A GT
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 215
Query: 250 GYTAPEYAIRG------ELSEKADIYSFGVLVLEI 278
Y APE E ++ADIY+ G++ EI
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 40/215 (18%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFL-SEVRMITSIQHKNLVRLLGCC 148
+G+G FG V+RGK G VAVK + S++ S F +E+ ++H+N++ +
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 149 SDG----SQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLHE 199
+ +Q LV +Y ++ SL +LN T ++ L A GL +LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLF--------DYLNRYTVTVEGMIKLALSTASGLAHLHM 124
Query: 200 D-----SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA-----GTL 249
+ I HRD+K+ N+L+ + I D GLA D A + + A GT
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 182
Query: 250 GYTAPEYAIRG------ELSEKADIYSFGVLVLEI 278
Y APE E ++ADIY+ G++ EI
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 40/215 (18%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFL-SEVRMITSIQHKNLVRLLGCC 148
+G+G FG V+RGK G VAVK + S++ S F +E+ ++H+N++ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 149 SDG----SQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLHE 199
+ +Q LV +Y ++ SL +LN T ++ L A GL +LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLF--------DYLNRYTVTVEGMIKLALSTASGLAHLHM 121
Query: 200 D-----SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA-----GTL 249
+ I HRD+K+ N+L+ + I D GLA D A + + A GT
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 179
Query: 250 GYTAPEYAIRG------ELSEKADIYSFGVLVLEI 278
Y APE E ++ADIY+ G++ EI
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E M+ DL + L + +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 127
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 128 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 181
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 182 PEW-IRYHRYHGRSAAVWSLGILLYDMV 208
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 40/215 (18%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFL-SEVRMITSIQHKNLVRLLGCC 148
+G+G FG V+RGK G VAVK + S++ S F +E+ ++H+N++ +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 149 SDG----SQRLLVYEYMKNRSLDLLIYGESDKFLNWST-----RFQIILGIARGLQYLHE 199
+ +Q LV +Y ++ SL +LN T ++ L A GL +LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLF--------DYLNRYTVTVEGMIKLALSTASGLAHLHM 144
Query: 200 D-----SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA-----GTL 249
+ I HRD+K+ N+L+ + I D GLA D A + + A GT
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTK 202
Query: 250 GYTAPEYAIRG------ELSEKADIYSFGVLVLEI 278
Y APE E ++ADIY+ G++ EI
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 21/202 (10%)
Query: 88 NLLGRGGFGPVYRGKLAD-GTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLG 146
++LG+G V+RG+ G L A+K + + E ++ + HKN+V+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 147 CCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIIL-GIARGLQYLHEDSHT 203
+ + R +L+ E+ SL ++ S+ + + F I+L + G+ +L E+
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-- 132
Query: 204 RIVHRDIKASNVL--LDEKFQS--KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIR 259
IVHR+IK N++ + E QS K+ DFG AR +D+ ++ GT Y P+ R
Sbjct: 133 -IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYGTEEYLHPDMYER 189
Query: 260 GELSEK--------ADIYSFGV 273
L + D++S GV
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGV 211
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 26/205 (12%)
Query: 90 LGRGGFGPVYRGKLA-DGTLVAVKKLCVD-KSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G +G V G VA+KKL +S+ E+R++ ++H+N++ LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 148 CS------DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDS 201
+ D + LV +M DL + +K +F ++ + +GL+Y+H
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGT---DLGKLMKHEKLGEDRIQF-LVYQMLKGLRYIHAAG 148
Query: 202 HTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAG---TLGYTAPEYAI 258
I+HRD+K N+ ++E + KI DFGLAR QA + G T Y APE +
Sbjct: 149 ---IIHRDLKPGNLAVNEDCELKILDFGLAR-----QA--DSEMXGXVVTRWYRAPEVIL 198
Query: 259 RG-ELSEKADIYSFGVLVLEIISCR 282
++ DI+S G ++ E+I+ +
Sbjct: 199 NWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
+G G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EYM + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ K+ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
+G G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EYM + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ K+ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 96/232 (41%), Gaps = 20/232 (8%)
Query: 53 TKEGVSKDFFNGNLRTISYFDFQTLKKATKNFHPGNLLGRGGFGPVYRG-KLADGTLVAV 111
T VSK NGN + DF L +LG+G FG V + L AV
Sbjct: 1 TTNTVSKFDNNGNRDRMKLTDFNFLM----------VLGKGSFGKVMLSERKGTDELYAV 50
Query: 112 KKLCVDKSQQGESE--FLSEVRMITSIQHKNLVRLLGCCSDGSQRL-LVYEYMKNRSLDL 168
K L D Q + + E R++ + L C RL V EY+ L
Sbjct: 51 KILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY 110
Query: 169 LIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDF 228
I + +F F IA GL +L I++RD+K NV+LD + KI DF
Sbjct: 111 HIQ-QVGRFKEPHAVF-YAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADF 165
Query: 229 GLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
G+ + D + F GT Y APE + D ++FGVL+ E+++
Sbjct: 166 GMCKENIWD-GVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
++G G FG V++ KL + VA+KK+ DK + E++++ ++H N+V L
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR-----ELQIMRIVKHPNVVDLKAFF 101
Query: 149 -SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIIL------GIARGLQYLHEDS 201
S+G ++ V+ + + +Y S + ++L + R L Y+H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS-- 159
Query: 202 HTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
I HRDIK N+LLD K+ DFG A+ + +S + Y APE
Sbjct: 160 -IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX--ICSRYYRAPELIFGA 216
Query: 261 -ELSEKADIYSFGVLVLEII 279
+ DI+S G ++ E++
Sbjct: 217 TNYTTNIDIWSTGCVMAELM 236
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 12/175 (6%)
Query: 67 RTISYFDFQTLKKATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESE 125
R S F QT++ +L GGF VY + + G A+K+L ++ ++ +
Sbjct: 13 RDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRA- 71
Query: 126 FLSEVRMITSIQ-HKNLVRLLGCCSDGSQR--------LLVYEYMKNRSLDLLIYGESDK 176
+ EV + + H N+V+ S G + LL+ E K + ++ L ES
Sbjct: 72 IIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG 131
Query: 177 FLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLA 231
L+ T +I R +Q++H I+HRD+K N+LL + K+ DFG A
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVA----VKKLCVDKSQQGES--EFLSEVRMITSIQ 137
+ G LG G F V + + L +KK S++G S + EV ++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H N++ L + + +L+ E + L D L ES L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 129
Query: 197 LHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
LH +I H D+K N++L + K + KI DFGLA + N GT +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPAFV 184
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIIS 280
APE L +AD++S GV+ ++S
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS-----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
++ + HKN++ LL + + Q + + + + +L +I E D +Q+
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
+ GI ++LH I+HRD+K SN+++ KI DFGLAR +++
Sbjct: 136 LCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEV 186
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRK 283
T Y APE + E DI+S G ++ E++ C K
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV-CHK 222
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 16/166 (9%)
Query: 116 VDKSQQGESEFLSEVRMITSI-QHKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGE 173
+DKS++ +E E+ ++ QH N++ L DG +V E K L D ++
Sbjct: 55 IDKSKRDPTE---EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL--- 108
Query: 174 SDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVHRDIKASNVL-LDEKFQS---KIGDFG 229
KF + ++ I + ++YLH +VHRD+K SN+L +DE +I DFG
Sbjct: 109 RQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFG 165
Query: 230 LARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLV 275
A+ + L T T + APE R DI+S GVL+
Sbjct: 166 FAKQLRAENGLLXTP-CYTANFVAPEVLERQGYDAACDIWSLGVLL 210
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 18/209 (8%)
Query: 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESE---FLSEVRMITSIQH 138
++F ++GRG FG V KL + V K+ +E F E ++ +
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF---QIILGIARGLQ 195
K + L D + LV +Y L L+ D+ RF ++++ I +
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI-DSVH 192
Query: 196 YLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPE 255
LH VHRDIK N+L+D ++ DFG ED S+ GT Y +PE
Sbjct: 193 QLH------YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPE 246
Query: 256 Y-----AIRGELSEKADIYSFGVLVLEII 279
+G + D +S GV + E++
Sbjct: 247 ILQAMEGGKGRYGPECDWWSLGVCMYEML 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVA----VKKLCVDKSQQGES--EFLSEVRMITSIQ 137
+ G LG G F V + + L +KK S++G S + EV ++ IQ
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H N++ L + + +L+ E + L D L ES L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 129
Query: 197 LHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
LH +I H D+K N++L + K + KI DFGLA + N GT +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIIS 280
APE L +AD++S GV+ ++S
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVA----VKKLCVDKSQQGES--EFLSEVRMITSIQ 137
+ G LG G F V + + L +KK S++G S + EV ++ IQ
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H N++ L + + +L+ E + L D L ES L + + I G+ Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 128
Query: 197 LHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
LH +I H D+K N++L + K + KI DFGLA D N GT +
Sbjct: 129 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFV 183
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIIS 280
APE L +AD++S GV+ ++S
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLS 211
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVA----VKKLCVDKSQQGES--EFLSEVRMITSIQ 137
+ G LG G F V + + L +KK S++G S + EV ++ IQ
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H N++ L + + +L+ E + L D L ES L + + I G+ Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 128
Query: 197 LHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
LH +I H D+K N++L + K + KI DFGLA + N GT +
Sbjct: 129 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 183
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIIS 280
APE L +AD++S GV+ ++S
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLS 211
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVA----VKKLCVDKSQQGES--EFLSEVRMITSIQ 137
+ G LG G F V + + L +KK S++G S + EV ++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H N++ L + + +L+ E + L D L ES L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 129
Query: 197 LHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
LH +I H D+K N++L + K + KI DFGLA + N GT +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIIS 280
APE L +AD++S GV+ ++S
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVA----VKKLCVDKSQQGES--EFLSEVRMITSIQ 137
+ G LG G F V + + L +KK S++G S + EV ++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H N++ L + + +L+ E + L D L ES L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 129
Query: 197 LHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
LH +I H D+K N++L + K + KI DFGLA + N GT +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIIS 280
APE L +AD++S GV+ ++S
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCS 149
+G+G +G V+ GK G VAVK + E +E+ ++H+N++ +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIAADI 101
Query: 150 DGS----QRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTR 204
G+ Q L+ +Y +N SL D L L+ + ++ GL +LH + +
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFST 157
Query: 205 -----IVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS---TNFAGTLGYTAPEY 256
I HRD+K+ N+L+ + I D GLA F D + GT Y PE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE- 216
Query: 257 AIRGELSEK-------ADIYSFGVLVLEI 278
+ L+ AD+YSFG+++ E+
Sbjct: 217 VLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 103/233 (44%), Gaps = 26/233 (11%)
Query: 55 EGVSKDFFNGNLRTISYFDFQTLKKATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKK 113
EGV L+ + Y + + AT LGRG FG V+R + G AVKK
Sbjct: 73 EGV---LLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKK 125
Query: 114 LCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGE 173
+ ++ + E+ + +V L G +G + E ++ SL L+
Sbjct: 126 VRLEVFRA------EELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV--- 176
Query: 174 SDKFLNWSTRFQIILGIA-RGLQYLHEDSHTRIVHRDIKASNVLL-DEKFQSKIGDFGLA 231
++ R LG A GL+YLH RI+H D+KA NVLL + + + DFG A
Sbjct: 177 KEQGCLPEDRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHA 233
Query: 232 RFFPED---QAYLSTNF-AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
D ++ L+ ++ GT + APE + K D++S ++L +++
Sbjct: 234 VCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 286
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 142
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 143 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 196
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 197 PEW-IRYHRYHGRSAAVWSLGILLYDMV 223
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 76 TLKKATKNFHPGNLLGRGGFGPVYRGKLADGTL---VAVKKLCVD-KSQQGESEFLSEVR 131
T+ K +N P +G G G V D L VA+KKL ++Q E+
Sbjct: 21 TVLKRYQNLKP---IGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYRELV 75
Query: 132 MITSIQHKNLVRLLGCCS-----DGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
++ + HKN++ LL + + Q + + + + +L +I E D +Q+
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
+ GI ++LH I+HRD+K SN+++ KI DFGLAR +++
Sbjct: 136 LCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEV 186
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRK 283
T Y APE + E D++S G ++ E++ C K
Sbjct: 187 VTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV-CHK 222
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVA----VKKLCVDKSQQGES--EFLSEVRMITSIQ 137
+ G LG G F V + + L +KK S++G S + EV ++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H N++ L + + +L+ E + L D L ES L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 129
Query: 197 LHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
LH +I H D+K N++L + K + KI DFGLA + N GT +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIIS 280
APE L +AD++S GV+ ++S
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 142
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 143 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 196
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 197 PEW-IRYHRYHGRSAAVWSLGILLYDMV 223
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 155
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 156 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 209
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 210 PEW-IRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVA----VKKLCVDKSQQGES--EFLSEVRMITSIQ 137
+ G LG G F V + + L +KK S++G S + EV ++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H N++ L + + +L+ E + L D L ES L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 129
Query: 197 LHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
LH +I H D+K N++L + K + KI DFGLA + N GT +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIIS 280
APE L +AD++S GV+ ++S
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 143
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 144 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 197
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 198 PEW-IRYHRYHGRSAAVWSLGILLYDMV 224
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 170
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 171 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 224
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 225 PEW-IRYHRYHGRSAAVWSLGILLYDMV 251
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 143
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 144 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 197
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 198 PEW-IRYHRYHGRSAAVWSLGILLYDMV 224
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 143
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 144 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 197
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 198 PEW-IRYHRYHGRSAAVWSLGILLYDMV 224
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVA----VKKLCVDKSQQGES--EFLSEVRMITSIQ 137
+ G LG G F V + + L +KK S++G S + EV ++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H N++ L + + +L+ E + L D L ES L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 129
Query: 197 LHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
LH +I H D+K N++L + K + KI DFGLA + N GT +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIIS 280
APE L +AD++S GV+ ++S
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVA----VKKLCVDKSQQGES--EFLSEVRMITSIQ 137
+ G LG G F V + + L +KK S++G S + EV ++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H N++ L + + +L+ E + L D L ES L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 129
Query: 197 LHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
LH +I H D+K N++L + K + KI DFGLA + N GT +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIIS 280
APE L +AD++S GV+ ++S
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 127
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 128 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 181
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 182 PEW-IRYHRYHGRSAAVWSLGILLYDMV 208
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 155
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 156 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 209
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 210 PEW-IRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 128
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 129 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 182
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 183 PEW-IRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 156
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 157 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 210
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 211 PEW-IRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVA----VKKLCVDKSQQGES--EFLSEVRMITSIQ 137
+ G LG G F V + + L +KK S++G S + EV ++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H N++ L + + +L+ E + L D L ES L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 129
Query: 197 LHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
LH +I H D+K N++L + K + KI DFGLA + N GT +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIIS 280
APE L +AD++S GV+ ++S
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 155
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 156 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 209
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 210 PEW-IRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 156
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 157 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 210
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 211 PEW-IRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 77/145 (53%), Gaps = 11/145 (7%)
Query: 90 LGRGGFGPVYRG---KLAD-GTLVAVKKL--CVDKSQQGESE-FLSEVRMITSIQHKNLV 142
LG+G F +++G ++ D G L + L +DK+ + SE F M++ + HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C G + +LV E++K SLD + ++ +N + ++ +A + +L E++
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAAAMHFLEENT- 133
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGD 227
++H ++ A N+LL + K G+
Sbjct: 134 --LIHGNVCAKNILLIREEDRKTGN 156
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVA----VKKLCVDKSQQGES--EFLSEVRMITSIQ 137
+ G LG G F V + + L +KK S++G S + EV ++ IQ
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H N++ L + + +L+ E + L D L ES L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 129
Query: 197 LHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
LH +I H D+K N++L + K + KI DFGLA + N GT +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIIS 280
APE L +AD++S GV+ ++S
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L AGT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----AGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 87 GNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK----- 139
G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 107
Query: 140 -NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLH 198
++RLL +L+ E + DL + L + +++ H
Sbjct: 108 SGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAVRHCH 166
Query: 199 EDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYA 257
+ ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+ PE+
Sbjct: 167 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSPPEW- 219
Query: 258 IRGE--LSEKADIYSFGVLVLEII 279
IR A ++S G+L+ +++
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDMV 243
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 128
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 129 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 182
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 183 PEW-IRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 156
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 157 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 210
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 211 PEW-IRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 156
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 157 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 210
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 211 PEW-IRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 155
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 156 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 209
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 210 PEW-IRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 77 LKKATKNFHPGNLLGRGGFGPV--YRGKLADGTLVAVKKLC-VDKSQQGESEFLSEVRMI 133
L+ +++ ++GRG FG V R K A + A+K L + ++ +S F E R I
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHK-ASQKVYAMKLLSKFEMIKRSDSAFFWEERDI 128
Query: 134 TSIQHKNLVRLLGCC-SDGSQRLLVYEYMKNRSLDLLI--YGESDKFLNWSTRFQIILGI 190
+ + V L C D +V EYM L L+ Y +K+ + T +++L
Sbjct: 129 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTA-EVVLA- 186
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG 250
L +H ++HRD+K N+LLD+ K+ DFG E GT
Sbjct: 187 ---LDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPD 240
Query: 251 YTAPEY----AIRGELSEKADIYSFGVLVLEII 279
Y +PE G + D +S GV + E++
Sbjct: 241 YISPEVLKSQGGDGYYGRECDWWSVGVFLFEML 273
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 170
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 171 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 224
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 225 PEW-IRYHRYHGRSAAVWSLGILLYDMV 251
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 128
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 129 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 182
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 183 PEW-IRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
+G G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ K+ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 175
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 176 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 229
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 230 PEW-IRYHRYHGRSAAVWSLGILLYDMV 256
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
LGRG FG V+R K G AVKK+ ++ + + E+ + +V L G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR------VEELVACAGLSSPRIVPLYGAV 133
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIA-RGLQYLHEDSHTRIVH 207
+G + E ++ SL LI R LG A GL+YLH RI+H
Sbjct: 134 REGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHT---RRILH 187
Query: 208 RDIKASNVLL-DEKFQSKIGDFGLARFFPED---QAYLSTNF-AGTLGYTAPEYAIRGEL 262
D+KA NVLL + ++ + DFG A D ++ L+ ++ GT + APE +
Sbjct: 188 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 247
Query: 263 SEKADIYSFGVLVLEIIS 280
K DI+S ++L +++
Sbjct: 248 DAKVDIWSSCCMMLHMLN 265
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVA----VKKLCVDKSQQGES--EFLSEVRMITSIQ 137
+ G LG G F V + + L +KK S++G S + EV ++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H N++ L + + +L+ E + L D L ES L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 129
Query: 197 LHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
LH +I H D+K N++L + K + KI DFGLA D N GT +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFV 184
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIIS 280
APE L +AD++S GV+ ++S
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 150
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 151 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 204
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 205 PEW-IRYHRYHGRSAAVWSLGILLYDMV 231
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 84 FHPGNLLGRGGFGPVYRGKLADGTLVA----VKKLCVDKSQQGES--EFLSEVRMITSIQ 137
+ G LG G F V + + L +KK S++G S + EV ++ IQ
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 138 HKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGIARGLQY 196
H N++ L + + +L+ E + L D L ES L + + I G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYY 129
Query: 197 LHEDSHTRIVHRDIKASNVLLDE----KFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYT 252
LH +I H D+K N++L + K + KI DFGLA + N GT +
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFV 184
Query: 253 APEYAIRGELSEKADIYSFGVLVLEIIS 280
APE L +AD++S GV+ ++S
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 86/197 (43%), Gaps = 30/197 (15%)
Query: 90 LGRGGFGPVYRGKLADGT----LVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LGRG VYR K GT + V K VDK +E+ ++ + H N+++L
Sbjct: 61 LGRGATSIVYRCK-QKGTQKPYALKVLKKTVDKKI-----VRTEIGVLLRLSHPNIIKLK 114
Query: 146 GCCSDGSQRLLVYEYMK-----NRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHED 200
++ LV E + +R ++ Y E D + I + YLHE+
Sbjct: 115 EIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA-------DAVKQILEAVAYLHEN 167
Query: 201 SHTRIVHRDIKASNVLLDEKFQS---KIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYA 257
IVHRD+K N+L KI DFGL++ E Q + T GT GY APE
Sbjct: 168 G---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV-EHQVLMKT-VCGTPGYCAPEIL 222
Query: 258 IRGELSEKADIYSFGVL 274
+ D++S G++
Sbjct: 223 RGCAYGPEVDMWSVGII 239
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 123
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 124 RHCHNXG---VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 177
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 178 PEW-IRYHRYHGRSAAVWSLGILLYDMV 204
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 126
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 127 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 180
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 181 PEW-IRYHRYHGRSAAVWSLGILLYDMV 207
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 123
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 124 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 177
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 178 PEW-IRYHRYHGRSAAVWSLGILLYDMV 204
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 77/145 (53%), Gaps = 11/145 (7%)
Query: 90 LGRGGFGPVYRG---KLAD-GTLVAVKKL--CVDKSQQGESE-FLSEVRMITSIQHKNLV 142
LG+G F +++G ++ D G L + L +DK+ + SE F M++ + HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 143 RLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSH 202
G C G + +LV E++K SLD + ++ +N + ++ +A + +L E++
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAWAMHFLEENT- 133
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGD 227
++H ++ A N+LL + K G+
Sbjct: 134 --LIHGNVCAKNILLIREEDRKTGN 156
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 94
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 95 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 146
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+DE+ ++ DFG A+ L GT Y APE +
Sbjct: 147 --LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 200
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 201 GYNKAVDWWALGVLIYEMAA 220
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 108
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFXEPHARFYAAQIVLT----FEYLHS- 160
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 214
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 215 GYNKAVDWWALGVLIYEMAA 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFXEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFXEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+++D++ K+ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 26/233 (11%)
Query: 55 EGVSKDFFNGNLRTISYFDFQTLKKATKNFHPGNLLGRGGFGPVYRGK-LADGTLVAVKK 113
EGV L+ + Y + + AT LGRG FG V+R + G AVKK
Sbjct: 54 EGV---LLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKK 106
Query: 114 LCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGE 173
+ ++ + E+ + +V L G +G + E ++ SL L+
Sbjct: 107 VRLEVFRA------EELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV--- 157
Query: 174 SDKFLNWSTRFQIILGIA-RGLQYLHEDSHTRIVHRDIKASNVLL-DEKFQSKIGDFGLA 231
++ R LG A GL+YLH RI+H D+KA NVLL + + + DFG A
Sbjct: 158 KEQGCLPEDRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHA 214
Query: 232 RFFPED---QAYLSTNF-AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
D + L+ ++ GT + APE + K D++S ++L +++
Sbjct: 215 VCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 267
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFXEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 83 NFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDK-SQQGESEFLSEVRMITSIQHK- 139
+ G LLG GGFG VY G +++D VA+K + D+ S GE + V M + K
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 140 -----NLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGL 194
++RLL +L+ E + DL + L + +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQVLEAV 123
Query: 195 QYLHEDSHTRIVHRDIKASNVLLD-EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTA 253
++ H + ++HRDIK N+L+D + + K+ DFG +D Y T+F GT Y+
Sbjct: 124 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--TDFDGTRVYSP 177
Query: 254 PEYAIRGE--LSEKADIYSFGVLVLEII 279
PE+ IR A ++S G+L+ +++
Sbjct: 178 PEW-IRYHRYHGRSAAVWSLGILLYDMV 204
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+GRG FG V+R K G AVKK+ ++ + + E+ + +V L G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR------VEELVACAGLSSPRIVPLYGAV 135
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIA-RGLQYLHEDSHTRIVH 207
+G + E ++ SL LI R LG A GL+YLH RI+H
Sbjct: 136 REGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHT---RRILH 189
Query: 208 RDIKASNVLL-DEKFQSKIGDFGLARFFPED---QAYLSTNF-AGTLGYTAPEYAIRGEL 262
D+KA NVLL + ++ + DFG A D ++ L+ ++ GT + APE +
Sbjct: 190 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 249
Query: 263 SEKADIYSFGVLVLEIIS 280
K DI+S ++L +++
Sbjct: 250 DAKVDIWSSCCMMLHMLN 267
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 28/213 (13%)
Query: 83 NFHPGNLLGRGGFGP-VYRGKLADGTLVAVKKL---CVDKSQQGESEFLSEVRMITSIQH 138
+F P ++LG G G VYRG + D VAVK++ C + + E + L E S +H
Sbjct: 25 SFCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPECFSFADR-EVQLLRE-----SDEH 77
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR-FQIILGIARGLQYL 197
N++R C++ R Y ++ + L Y E F + ++ GL +L
Sbjct: 78 PNVIRYF--CTE-KDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL 134
Query: 198 HEDSHTRIVHRDIKASNVLLDE-----KFQSKIGDFGLARFFPEDQAYLS--TNFAGTLG 250
H IVHRD+K N+L+ K ++ I DFGL + + S + GT G
Sbjct: 135 HS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEG 191
Query: 251 YTAPEYA---IRGELSEKADIYSFGVLVLEIIS 280
+ APE + + DI+S G + +IS
Sbjct: 192 WIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 129 EVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIIL 188
E+ +++ ++H N++++L + LV E LDL + + L+ I
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVME-KHGSGLDLFAFIDRHPRLDEPLASYIFR 137
Query: 189 GIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGT 248
+ + YL I+HRDIK N+++ E F K+ DFG A + ++ L F GT
Sbjct: 138 QLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL--ERGKLFYTFCGT 192
Query: 249 LGYTAPEYAI----RGELSEKADIYSFGVLVLEII 279
+ Y APE + RG + +++S GV + ++
Sbjct: 193 IEYCAPEVLMGNPYRG---PELEMWSLGVTLYTLV 224
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGCC 148
+GRG FG V+R K G AVKK+ ++ + + E+ + +V L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR------VEELVACAGLSSPRIVPLYGAV 119
Query: 149 SDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIA-RGLQYLHEDSHTRIVH 207
+G + E ++ SL LI R LG A GL+YLH RI+H
Sbjct: 120 REGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHT---RRILH 173
Query: 208 RDIKASNVLL-DEKFQSKIGDFGLARFFPED---QAYLSTNF-AGTLGYTAPEYAIRGEL 262
D+KA NVLL + ++ + DFG A D ++ L+ ++ GT + APE +
Sbjct: 174 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 233
Query: 263 SEKADIYSFGVLVLEIIS 280
K DI+S ++L +++
Sbjct: 234 DAKVDIWSSCCMMLHMLN 251
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 100
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFXEPHARFYAAQIVLT----FEYLHS- 152
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 153 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 206
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 207 GYNKAVDWWALGVLIYEMAA 226
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 108
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 160
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 214
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 215 GYNKAVDWWALGVLIYEMAA 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+++D++ K+ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 102
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 103 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQIVLT----FEYLHS- 154
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 155 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 208
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 209 GYNKAVDWWALGVLIYEMAA 228
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 20/198 (10%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 93
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF---QIILGIARGLQYLHEDSH 202
D S +V EY+ + +F RF QI+L +YLH
Sbjct: 94 FSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS--- 145
Query: 203 TRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGEL 262
+++RD+K N+L+D++ ++ DFG A+ + GT Y APE +
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEIILSKGY 201
Query: 263 SEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 202 NKAVDWWALGVLIYEMAA 219
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQ----- 238
I + IA +++LH ++HRD+K SN+ K+GDFGL +D+
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 239 -----AYLS-TNFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEII 279
AY + GT Y +PE S K DI+S G+++ E++
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 83 NFHPGNLLGRGGFGPVYRGK-LADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNL 141
+F P +GRGGFG V+ K D A+K++ + + + + EV+ + ++H +
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 142 VRLLGC 147
VR
Sbjct: 67 VRYFNA 72
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K ++ E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+++D++ K+ DFGLA+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 108
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 160
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ + GT Y APE +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEIILSK 214
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 215 GYNKAVDWWALGVLIYEMAA 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFAEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 128
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQIVLT----FEYLHS- 180
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 181 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 234
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 235 GYNKAVDWWALGVLIYEMAA 254
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+++D++ ++ DFG A+ L GT Y APE I
Sbjct: 160 --LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIISK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 36/215 (16%)
Query: 128 SEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR---- 183
+E+ ++ + H ++++ D +V E M+ L + G +K L +T
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYF 126
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAY 240
+Q++L + QYLHE+ I+HRD+K NVLL +E KI DFG ++ E
Sbjct: 127 YQMLLAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS-- 177
Query: 241 LSTNFAGTLGYTAPEYAIR---GELSEKADIYSFGVLVLEIIS-----CRKNTDLTLPSE 292
L GT Y APE + + D +S GV++ +S T ++L +
Sbjct: 178 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 237
Query: 293 M-----QYLPEYAWKLYERG----RILELVDPRMR 318
+ ++PE ++ E+ + L +VDP+ R
Sbjct: 238 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 272
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 78 KKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDK----SQQGES--EFLSEVR 131
+K + G LG G F V + + L K + S++G S E EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 132 MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGI 190
++ + H N++ L + + +L+ E + L D L ES L+ I I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQI 124
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKF----QSKIGDFGLARFFPEDQAYLSTNFA 246
G+ YLH +I H D+K N++L +K K+ DFGLA + + N
Sbjct: 125 LDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIF 179
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
GT + APE L +AD++S GV+ ++S
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 106/256 (41%), Gaps = 55/256 (21%)
Query: 71 YFDFQTLKKATKNFHPGNLLGRGGFGPVYRGKLADGT--LVAVKKLCVDKSQQGESEFL- 127
YF +L + K +H +G+G +G V R + + T + A+K + +K +Q + +
Sbjct: 15 YFQGGSLLELQKKYHLKGAIGQGSYG-VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVE 73
Query: 128 ---SEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNR-----------------SLD 167
+EVR++ + H N+ RL D LV E ++D
Sbjct: 74 RIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMD 133
Query: 168 LL--------------IYGESDKF---LNWSTRFQIILGIAR----GLQYLHEDSHTRIV 206
++ I G F L++ R ++I I R L YLH I
Sbjct: 134 VVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---IC 190
Query: 207 HRDIKASNVLL--DEKFQSKIGDFGLARFF---PEDQAYLSTNFAGTLGYTAPEY--AIR 259
HRDIK N L ++ F+ K+ DFGL++ F + Y T AGT + APE
Sbjct: 191 HRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN 250
Query: 260 GELSEKADIYSFGVLV 275
K D +S GVL+
Sbjct: 251 ESYGPKCDAWSAGVLL 266
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 36/215 (16%)
Query: 128 SEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWST----R 183
+E+ ++ + H ++++ D +V E M+ L + G +K L +T
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYF 120
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAY 240
+Q++L + QYLHE+ I+HRD+K NVLL +E KI DFG ++ E
Sbjct: 121 YQMLLAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS-- 171
Query: 241 LSTNFAGTLGYTAPEYAIR---GELSEKADIYSFGVLVLEIIS-----CRKNTDLTLPSE 292
L GT Y APE + + D +S GV++ +S T ++L +
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 231
Query: 293 M-----QYLPEYAWKLYERG----RILELVDPRMR 318
+ ++PE ++ E+ + L +VDP+ R
Sbjct: 232 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 36/215 (16%)
Query: 128 SEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWST----R 183
+E+ ++ + H ++++ D +V E M+ L + G +K L +T
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYF 120
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAY 240
+Q++L + QYLHE+ I+HRD+K NVLL +E KI DFG ++ E
Sbjct: 121 YQMLLAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS-- 171
Query: 241 LSTNFAGTLGYTAPEYAIR---GELSEKADIYSFGVLVLEIIS-----CRKNTDLTLPSE 292
L GT Y APE + + D +S GV++ +S T ++L +
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 231
Query: 293 M-----QYLPEYAWKLYERG----RILELVDPRMR 318
+ ++PE ++ E+ + L +VDP+ R
Sbjct: 232 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 78 KKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDK----SQQGES--EFLSEVR 131
+K + G LG G F V + + L K + S++G S E EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 132 MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGI 190
++ + H N++ L + + +L+ E + L D L ES L+ I I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQI 124
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKF----QSKIGDFGLARFFPEDQAYLSTNFA 246
G+ YLH +I H D+K N++L +K K+ DFGLA + + N
Sbjct: 125 LDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIF 179
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
GT + APE L +AD++S GV+ ++S
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 36/215 (16%)
Query: 128 SEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR---- 183
+E+ ++ + H ++++ D +V E M+ L + G +K L +T
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYF 119
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAY 240
+Q++L + QYLHE+ I+HRD+K NVLL +E KI DFG ++ E
Sbjct: 120 YQMLLAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS-- 170
Query: 241 LSTNFAGTLGYTAPEYAIR---GELSEKADIYSFGVLVLEIIS-----CRKNTDLTLPSE 292
L GT Y APE + + D +S GV++ +S T ++L +
Sbjct: 171 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 230
Query: 293 M-----QYLPEYAWKLYERG----RILELVDPRMR 318
+ ++PE ++ E+ + L +VDP+ R
Sbjct: 231 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 265
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 100
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 152
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 153 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 206
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 207 GYNKAVDWWALGVLIYEMAA 226
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 36/215 (16%)
Query: 128 SEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWST----R 183
+E+ ++ + H ++++ D +V E M+ L + G +K L +T
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYF 120
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAY 240
+Q++L + QYLHE+ I+HRD+K NVLL +E KI DFG ++ E
Sbjct: 121 YQMLLAV----QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS-- 171
Query: 241 LSTNFAGTLGYTAPEYAIR---GELSEKADIYSFGVLVLEIIS-----CRKNTDLTLPSE 292
L GT Y APE + + D +S GV++ +S T ++L +
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 231
Query: 293 M-----QYLPEYAWKLYERG----RILELVDPRMR 318
+ ++PE ++ E+ + L +VDP+ R
Sbjct: 232 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX----GTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 78 KKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDK----SQQGES--EFLSEVR 131
+K + G LG G F V + + L K + S++G S E EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 132 MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGI 190
++ + H N++ L + + +L+ E + L D L ES L+ I I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQI 124
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKF----QSKIGDFGLARFFPEDQAYLSTNFA 246
G+ YLH +I H D+K N++L +K K+ DFGLA + + N
Sbjct: 125 LDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIF 179
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
GT + APE L +AD++S GV+ ++S
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 128
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 180
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ + GT Y APE +
Sbjct: 181 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----ATWTLCGTPEYLAPEIILSK 234
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 235 GYNKAVDWWALGVLIYEMAA 254
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 108
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY + L G +F RF QI+L +YLH
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 160
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+++D++ K+ DFG A+ L GT Y APE +
Sbjct: 161 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 214
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 215 GYNKAVDWWALGVLIYEMAA 234
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 78 KKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDK----SQQGES--EFLSEVR 131
+K + G LG G F V + + L K + S++G S E EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 132 MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGI 190
++ + H N++ L + + +L+ E + L D L ES L+ I I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQI 124
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKF----QSKIGDFGLARFFPEDQAYLSTNFA 246
G+ YLH +I H D+K N++L +K K+ DFGLA + + N
Sbjct: 125 LDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIF 179
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
GT + APE L +AD++S GV+ ++S
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 108
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 160
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 214
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 215 GYNKAVDWWALGVLIYEMAA 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 108
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 160
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 214
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 215 GYNKAVDWWALGVLIYEMAA 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 108
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 109 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 160
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 214
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 215 GYNKAVDWWALGVLIYEMAA 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 108
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 160
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 214
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 215 GYNKAVDWWALGVLIYEMAA 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 128
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 129 FSFKDNSNLYMVMEYVPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 180
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 181 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 234
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 235 GYNKAVDWWALGVLIYEMAA 254
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 21/215 (9%)
Query: 78 KKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGES-------EFLSEV 130
+K + G LG G F V + + L K + K Q S E EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKF-IKKRQSRASRRGVCREEIEREV 66
Query: 131 RMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILG 189
++ + H N++ L + + +L+ E + L D L ES L+ I
Sbjct: 67 SILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQ 123
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKF----QSKIGDFGLARFFPEDQAYLSTNF 245
I G+ YLH +I H D+K N++L +K K+ DFGLA + + N
Sbjct: 124 ILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNI 178
Query: 246 AGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
GT + APE L +AD++S GV+ ++S
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 78 KKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDK----SQQGES--EFLSEVR 131
+K + G LG G F V + + L K + S++G S E EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 132 MITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSL-DLLIYGESDKFLNWSTRFQIILGI 190
++ + H N++ L + + +L+ E + L D L ES L+ I I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQI 124
Query: 191 ARGLQYLHEDSHTRIVHRDIKASNVLLDEKF----QSKIGDFGLARFFPEDQAYLSTNFA 246
G+ YLH +I H D+K N++L +K K+ DFGLA + + N
Sbjct: 125 LDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIF 179
Query: 247 GTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIS 280
GT + APE L +AD++S GV+ ++S
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ L +L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLTKLE 108
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY + L G +F RF QI+L +YLH
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFXEPHARFYAAQIVLT----FEYLHS- 160
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+++D++ K+ DFG A+ L GT Y APE +
Sbjct: 161 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 214
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 215 GYNKAVDWWALGVLIYEMAA 234
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 28/211 (13%)
Query: 128 SEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII 187
+E+ ++ + H ++++ D +V E M+ L + G +K L +T
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYF 245
Query: 188 LGIARGLQYLHEDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAYLSTN 244
+ +QYLHE+ I+HRD+K NVLL +E KI DFG ++ E L
Sbjct: 246 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT 300
Query: 245 FAGTLGYTAPEYAIR---GELSEKADIYSFGVLVLEIIS-----CRKNTDLTLPSEM--- 293
GT Y APE + + D +S GV++ +S T ++L ++
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 360
Query: 294 --QYLPEYAWKLYERG----RILELVDPRMR 318
++PE ++ E+ + L +VDP+ R
Sbjct: 361 KYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 391
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 91/200 (45%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R+ ++ LV+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRIQQAVNFPFLVKLE 108
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY + L G +F RF QI+L +YLH
Sbjct: 109 FSFKDNSNLYMVLEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 160
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ K+ DFG A+ L GT Y APE +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 214
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 215 GYNKAVDWWALGVLIYEMAA 234
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 71 YFDFQTLK--KATKNFHPGNLLGRGGFGPVYRG--KLADGTLVAVKKLC-VDKSQQGESE 125
YF +K K N+ +L+GRG +G VY K A+ VA+KK+ + +
Sbjct: 15 YFQGAIIKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKN-VAIKKVNRMFEDLIDCKR 73
Query: 126 FLSEVRMITSIQHKNLVRL--LGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTR 183
L E+ ++ ++ ++RL L D + +Y ++ DL ++ FL
Sbjct: 74 ILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHV 133
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLST 243
I+ + G +++HE + I+HRD+K +N LL++ KI DFGLAR D+
Sbjct: 134 KTILYNLLLGEKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIV 190
Query: 244 N------------------------FAGTLGYTAPEYAIRGE-LSEKADIYSFGVLVLEI 278
N T Y APE + E + DI+S G + E+
Sbjct: 191 NDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250
Query: 279 ISCRK 283
++ K
Sbjct: 251 LNMMK 255
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 28/211 (13%)
Query: 128 SEVRMITSIQHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQII 187
+E+ ++ + H ++++ D +V E M+ L + G +K L +T
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYF 259
Query: 188 LGIARGLQYLHEDSHTRIVHRDIKASNVLL---DEKFQSKIGDFGLARFFPEDQAYLSTN 244
+ +QYLHE+ I+HRD+K NVLL +E KI DFG ++ E L
Sbjct: 260 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRT 314
Query: 245 FAGTLGYTAPEYAIR---GELSEKADIYSFGVLVLEIIS-----CRKNTDLTLPSEM--- 293
GT Y APE + + D +S GV++ +S T ++L ++
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 374
Query: 294 --QYLPEYAWKLYERG----RILELVDPRMR 318
++PE ++ E+ + L +VDP+ R
Sbjct: 375 KYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 405
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+++D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 31/222 (13%)
Query: 70 SYFDFQTLKKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCV-DKSQQGESEFLS 128
S DF+ L TK L G +++G+ G + VK L V D S + +F
Sbjct: 5 SGIDFKQLNFLTK-------LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNE 56
Query: 129 EVRMITSIQHKNLVRLLGCCSD--GSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI 186
E + H N++ +LG C L+ +M SL +++ ++ ++ S +
Sbjct: 57 ECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKF 116
Query: 187 ILGIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFA 246
L +ARG+ +LH I + + +V++DE ++I A + +F
Sbjct: 117 ALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMTARIS-----------MADVKFSFQ 164
Query: 247 GTLGYTAPEYAIRGELSEK--------ADIYSFGVLVLEIIS 280
AP + L +K AD++SF VL+ E+++
Sbjct: 165 SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K ++ E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+++D++ ++ DFGLA+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 83/189 (43%), Gaps = 15/189 (7%)
Query: 90 LGRGGFGP--VYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G FG + R KL LVAVK +++ + E+ S++H N+VR
Sbjct: 28 IGSGNFGVARLMRDKLT-KELVAVKY--IERGAAIDENVQREIINHRSLRHPNIVRFKEV 84
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVH 207
+ ++ EY L I + +F RF + G+ Y H +I H
Sbjct: 85 ILTPTHLAIIMEYASGGELYERICN-AGRFSEDEARF-FFQQLLSGVSYCHS---MQICH 139
Query: 208 RDIKASNVLLD--EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEK 265
RD+K N LLD + KI DFG ++ ST GT Y APE +R E K
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLRQEYDGK 197
Query: 266 -ADIYSFGV 273
AD++S GV
Sbjct: 198 IADVWSCGV 206
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ L +L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLTKLE 108
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY + L G +F RF QI+L +YLH
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 160
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+++D++ K+ DFG A+ L GT Y APE +
Sbjct: 161 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 214
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 215 GYNKAVDWWALGVLIYEMAA 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGK-LADGTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ L +L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLTKLE 108
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY + L G +F RF QI+L +YLH
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 160
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+++D++ K+ DFG A+ L GT Y APE +
Sbjct: 161 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 214
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 215 GYNKAVDWWALGVLIYEMAA 234
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 27/195 (13%)
Query: 90 LGRGGFGP--VYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G FG + R K A+ LVAVK +++ ++ + E+ S++H N+VR
Sbjct: 27 IGAGNFGVARLMRDKQAN-ELVAVK--YIERGEKIDENVKREIINHRSLRHPNIVRFKEV 83
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF---QIILGIARGLQYLHEDSHTR 204
+ +V EY L I + +F RF Q+I G++ Y H +
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVS----YAHA---MQ 135
Query: 205 IVHRDIKASNVLLD--EKFQSKIGDFGLARFFPEDQAYLST---NFAGTLGYTAPEYAIR 259
+ HRD+K N LLD + KI DFG ++ + L + + GT Y APE ++
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSK-----ASVLHSQPKSAVGTPAYIAPEVLLK 190
Query: 260 GELSEK-ADIYSFGV 273
E K AD++S GV
Sbjct: 191 KEYDGKVADVWSCGV 205
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ ++ +
Sbjct: 214 GYNKAVDWWALGVLIYQMAA 233
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 88/209 (42%), Gaps = 18/209 (8%)
Query: 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESE---FLSEVRMITSIQH 138
++F ++GRG FG V K+ + + K+ +E F E ++ +
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF---QIILGIARGLQ 195
+ + L D + LV +Y L L+ DK RF +++L I +
Sbjct: 134 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI-DSIH 192
Query: 196 YLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPE 255
LH VHRDIK NVLLD ++ DFG +D S+ GT Y +PE
Sbjct: 193 QLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPE 246
Query: 256 Y--AIR---GELSEKADIYSFGVLVLEII 279
A+ G+ + D +S GV + E++
Sbjct: 247 ILQAMEDGMGKYGPECDWWSLGVCMYEML 275
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 75 QTLKKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLC--VDKSQQGESEFLSEVRM 132
+ L+ +++ ++GRG FG V + V KL + ++ +S F E R
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 133 ITSIQHKN-LVRLLGCCSDGSQRLLVYEYMKNRSLDLLI--YGESDKFLNWSTRFQIILG 189
I + + +V+L D +V EYM L L+ Y +K+ + T +++L
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA-EVVLA 185
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL 249
L +H +HRD+K N+LLD+ K+ DFG ++ GT
Sbjct: 186 ----LDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 238
Query: 250 GYTAPEY----AIRGELSEKADIYSFGVLVLEII 279
Y +PE G + D +S GV + E++
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 88/209 (42%), Gaps = 18/209 (8%)
Query: 82 KNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESE---FLSEVRMITSIQH 138
++F ++GRG FG V K+ + + K+ +E F E ++ +
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 139 KNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRF---QIILGIARGLQ 195
+ + L D + LV +Y L L+ DK RF +++L I +
Sbjct: 150 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI-DSIH 208
Query: 196 YLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPE 255
LH VHRDIK NVLLD ++ DFG +D S+ GT Y +PE
Sbjct: 209 QLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPE 262
Query: 256 Y--AIR---GELSEKADIYSFGVLVLEII 279
A+ G+ + D +S GV + E++
Sbjct: 263 ILQAMEDGMGKYGPECDWWSLGVCMYEML 291
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 75 QTLKKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLC--VDKSQQGESEFLSEVRM 132
+ L+ +++ ++GRG FG V + V KL + ++ +S F E R
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 133 ITSIQHKN-LVRLLGCCSDGSQRLLVYEYMKNRSLDLLI--YGESDKFLNWSTRFQIILG 189
I + + +V+L D +V EYM L L+ Y +K+ + T +++L
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA-EVVLA 180
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL 249
L +H +HRD+K N+LLD+ K+ DFG ++ GT
Sbjct: 181 ----LDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 233
Query: 250 GYTAPEY----AIRGELSEKADIYSFGVLVLEII 279
Y +PE G + D +S GV + E++
Sbjct: 234 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 75 QTLKKATKNFHPGNLLGRGGFGPVYRGKLADGTLVAVKKLC--VDKSQQGESEFLSEVRM 132
+ L+ +++ ++GRG FG V + V KL + ++ +S F E R
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 133 ITSIQHKN-LVRLLGCCSDGSQRLLVYEYMKNRSLDLLI--YGESDKFLNWSTRFQIILG 189
I + + +V+L D +V EYM L L+ Y +K+ + T +++L
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA-EVVLA 185
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL 249
L +H +HRD+K N+LLD+ K+ DFG ++ GT
Sbjct: 186 ----LDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 238
Query: 250 GYTAPEY----AIRGELSEKADIYSFGVLVLEII 279
Y +PE G + D +S GV + E++
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 87 GNLLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLS---EVRMITSIQHKNLVR 143
G +GRG +G VY+ K DG L K +G +S E+ ++ ++H N++
Sbjct: 26 GCKVGRGTYGHVYKAKRKDGKDDKDYAL---KQIEGTGISMSACREIALLRELKHPNVIS 82
Query: 144 LLGCCSDGSQR--LLVYEYMKNRSLDLLIYGESDKFLNWSTRF------QIILGIARGLQ 195
L + R L+++Y ++ ++ + + K + ++ I G+
Sbjct: 83 LQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142
Query: 196 YLHEDSHTRIVHRDIKASNVLL----DEKFQSKIGDFGLARFFPEDQAYLS--TNFAGTL 249
YLH + ++HRD+K +N+L+ E+ + KI D G AR F L+ T
Sbjct: 143 YLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTF 199
Query: 250 GYTAPEYAIRGELSEKA-DIYSFGVLVLEIIS 280
Y APE + KA DI++ G + E+++
Sbjct: 200 WYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 90 LGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGE---SEFLSEVRMITSIQH-KNLVRLL 145
LGRG F V R ++ T + K ++G+ +E L E+ ++ + ++ L
Sbjct: 37 LGRGKFA-VVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95
Query: 146 GCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRI 205
+ S+ +L+ EY + L E + ++ + ++I I G+ YLH+++ I
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---I 152
Query: 206 VHRDIKASNVLLDEKF---QSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGEL 262
VH D+K N+LL + KI DFG++R A GT Y APE +
Sbjct: 153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--GHACELREIMGTPEYLAPEILNYDPI 210
Query: 263 SEKADIYSFGVLVLEIIS 280
+ D+++ G++ +++
Sbjct: 211 TTATDMWNIGIIAYMLLT 228
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 27/200 (13%)
Query: 90 LGRGGFGPVYRGKLA-DGTLVAVKK-LCVDKSQQGESEFLSEVRMITSI-QHKNLVRLLG 146
LG G +G V++ + DG L AVK+ + + + + L+EV + QH VRL
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 147 CCSDGSQRLLVYEYMKNRSLD--LLIYGES-DKFLNWSTRFQIILGIARGLQYLHEDSHT 203
+G L E + SL +G S + W +L +A +LH
Sbjct: 125 AWEEGGILYLQTE-LCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALA----HLHSQG-- 177
Query: 204 RIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLG-----YTAPEYAI 258
+VH D+K +N+ L + + K+GDFGL L T AG + Y APE +
Sbjct: 178 -LVHLDVKPANIFLGPRGRCKLGDFGLL-------VELGTAGAGEVQEGDPRYMAPEL-L 228
Query: 259 RGELSEKADIYSFGVLVLEI 278
+G AD++S G+ +LE+
Sbjct: 229 QGSYGTAADVFSLGLTILEV 248
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT Y AP +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPAIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 15/189 (7%)
Query: 90 LGRGGFGP--VYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G FG + R K ++ LVAVK +++ ++ + E+ S++H N+VR
Sbjct: 26 IGSGNFGVARLMRDKQSN-ELVAVKY--IERGEKIDENVKREIINHRSLRHPNIVRFKEV 82
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVH 207
+ +V EY L I + +F RF + G+ Y H ++ H
Sbjct: 83 ILTPTHLAIVMEYASGGELFERICN-AGRFSEDEARF-FFQQLISGVSYCHA---MQVCH 137
Query: 208 RDIKASNVLLD--EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEK 265
RD+K N LLD + KI DFG ++ ST GT Y APE ++ E K
Sbjct: 138 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEYDGK 195
Query: 266 -ADIYSFGV 273
AD++S GV
Sbjct: 196 VADVWSCGV 204
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 15/189 (7%)
Query: 90 LGRGGFGP--VYRGKLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLLGC 147
+G G FG + R K ++ LVAVK +++ ++ + E+ S++H N+VR
Sbjct: 27 IGSGNFGVARLMRDKQSN-ELVAVKY--IERGEKIAANVKREIINHRSLRHPNIVRFKEV 83
Query: 148 CSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIVH 207
+ +V EY L I + +F RF + G+ Y H ++ H
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICN-AGRFSEDEARF-FFQQLISGVSYCHA---MQVCH 138
Query: 208 RDIKASNVLLD--EKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRGELSEK 265
RD+K N LLD + KI DFG ++ ST GT Y APE ++ E K
Sbjct: 139 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEYDGK 196
Query: 266 -ADIYSFGV 273
AD++S GV
Sbjct: 197 VADVWSCGV 205
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 81 TKNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQG---ESEFLSEVRMITSI 136
T FH +G G FG V++ K DG + A+K+ K G E L EV +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR--SKKPLAGSVDEQNALREVYAHAVL 65
Query: 137 -QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI---ILGIAR 192
QH ++VR ++ L+ EY SL I E+ + +++ ++ +L + R
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 124
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLL 217
GL+Y+H S +VH DIK SN+ +
Sbjct: 125 GLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 81 TKNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQG---ESEFLSEVRMITSI 136
T FH +G G FG V++ K DG + A+K+ K G E L EV +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR--SKKPLAGSVDEQNALREVYAHAVL 65
Query: 137 -QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI---ILGIAR 192
QH ++VR ++ L+ EY SL I E+ + +++ ++ +L + R
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 124
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLL 217
GL+Y+H S +VH DIK SN+ +
Sbjct: 125 GLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 81 TKNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQG---ESEFLSEVRMITSI 136
T FH +G G FG V++ K DG + A+K+ K G E L EV +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR--SKKPLAGSVDEQNALREVYAHAVL 63
Query: 137 -QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI---ILGIAR 192
QH ++VR ++ L+ EY SL I E+ + +++ ++ +L + R
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 122
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLL 217
GL+Y+H S +VH DIK SN+ +
Sbjct: 123 GLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 82 KNFHPGNLLGRGGFGPV-----------YRGKLADGTLVAVKKLCVDKSQQGESEFLSEV 130
+N+ P +LGRG V Y K+ D T ++ Q+ L EV
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVT--GGGSFSAEEVQELREATLKEV 74
Query: 131 RMITSIQ-HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG 189
++ + H N+++L + LV++ MK +L Y L+ +I+
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG--ELFDYLTEKVTLSEKETRKIMRA 132
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL 249
+ + LH+ IVHRD+K N+LLD+ K+ DFG + + S GT
Sbjct: 133 LLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSV--CGTP 187
Query: 250 GYTAPEYAIRGELSE-------KADIYSFGVLVLEIIS 280
Y APE I +++ + D++S GV++ +++
Sbjct: 188 SYLAPE-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 81 TKNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQG---ESEFLSEVRMITSI 136
T FH +G G FG V++ K DG + A+K+ K G E L EV +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR--SKKPLAGSVDEQNALREVYAHAVL 67
Query: 137 -QHKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQI---ILGIAR 192
QH ++VR ++ L+ EY SL I E+ + +++ ++ +L + R
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVGR 126
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLL 217
GL+Y+H S +VH DIK SN+ +
Sbjct: 127 GLRYIHSMS---LVHMDIKPSNIFI 148
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLS----------EVRMITSIQH 138
+ G +G V G ++G VA+K++ S LS E+R++ H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 139 KNLVRL----LGCCSDGSQRL-LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIIL-GIAR 192
N++ L + +L LV E M+ DL + + Q + I
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRT---DLAQVIHDQRIVISPQHIQYFMYHILL 145
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS-TNFAGTLGY 251
GL LHE +VHRD+ N+LL + I DF LAR ED A + T++ Y
Sbjct: 146 GLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWY 199
Query: 252 TAPEYAIRGE-LSEKADIYSFGVLVLEIIS 280
APE ++ + ++ D++S G ++ E+ +
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 24/200 (12%)
Query: 90 LGRGGFGPVYRGKLAD-GTLVAVK---KLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
LG G FG V K + G A+K K V K +Q E L+E R++ ++ LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 146 GCCSDGSQRLLVYEYMKNRSL--DLLIYGESDKFLNWSTRF---QIILGIARGLQYLHED 200
D S +V EY+ + L G +F RF QI+L +YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLT----FEYLHS- 159
Query: 201 SHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTLGYTAPEYAIRG 260
+++RD+K N+L+D++ ++ DFG A+ L GT APE +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEALAPEIILSK 213
Query: 261 ELSEKADIYSFGVLVLEIIS 280
++ D ++ GVL+ E+ +
Sbjct: 214 GYNKAVDWWALGVLIYEMAA 233
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 27/216 (12%)
Query: 71 YFDFQTLKKATKNFHPGNLLGRGGFGPVYRGKLADGTLV--AVKKLCVDKSQQGESEFLS 128
YF T + + N +GRG +G V + + GT + A KK+ + F
Sbjct: 15 YFQGSTKGDINQYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIP-KYFVEDVDRFKQ 72
Query: 129 EVRMITSIQHKNLVRLLGCCSDGSQRLLVYEY-----MKNRSLDLLIYGESDKFLNWSTR 183
E+ ++ S+ H N++RL D + LV E + R + ++ ESD
Sbjct: 73 EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA------- 125
Query: 184 FQIILGIARGLQYLHEDSHTRIVHRDIKASNVL-LDEKFQS--KIGDFGL-ARFFPEDQA 239
+I+ + + Y H+ + HRD+K N L L + S K+ DFGL ARF P
Sbjct: 126 ARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP---G 179
Query: 240 YLSTNFAGTLGYTAPEYAIRGELSEKADIYSFGVLV 275
+ GT Y +P+ + G + D +S GV++
Sbjct: 180 KMMRTKVGTPYYVSPQ-VLEGLYGPECDEWSAGVMM 214
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 89 LLGRGGFGPVYRGKLADGTLVAVKKLCVDKSQQGESEFLS----------EVRMITSIQH 138
+ G +G V G ++G VA+K++ S LS E+R++ H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 139 KNLVRL----LGCCSDGSQRL-LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIIL-GIAR 192
N++ L + +L LV E M+ DL + + Q + I
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRT---DLAQVIHDQRIVISPQHIQYFMYHILL 145
Query: 193 GLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLS-TNFAGTLGY 251
GL LHE +VHRD+ N+LL + I DF LAR ED A + T++ Y
Sbjct: 146 GLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWY 199
Query: 252 TAPEYAIRGE-LSEKADIYSFGVLVLEIIS 280
APE ++ + ++ D++S G ++ E+ +
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 89 LLGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVRMITSIQ-HKNLVRLLG 146
LLG G + V L +G AVK + ++ S EV + Q +KN++ L+
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVK-IIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 147 CCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHEDSHTRIV 206
D ++ LV+E ++ S+ L + + K N +++ +A L +LH I
Sbjct: 79 FFEDDTRFYLVFEKLQGGSI--LAHIQKQKHFNEREASRVVRDVAAALDFLHTKG---IA 133
Query: 207 HRDIKASNVLLD--EKFQS-KIGDFGLARFFPEDQAYLS------TNFAGTLGYTAPE-- 255
HRD+K N+L + EK KI DF L + + T G+ Y APE
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 256 --YAIRGELSEK-ADIYSFGVLVLEIIS 280
+ + +K D++S GV++ ++S
Sbjct: 194 EVFTDQATFYDKRCDLWSLGVVLYIMLS 221
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 30/213 (14%)
Query: 73 DFQTLKKATKNFHPGNLLGRGGFGPVYRG-KLADGTLVAVKKLCVDKSQQGESEFLSEVR 131
D+Q ++K LGRG + V+ + + V VK L K +++ E++
Sbjct: 38 DYQLVRK----------LGRGKYSEVFEAINITNNEKVVVKILKPVK----KNKIKREIK 83
Query: 132 MITSIQH-KNLVRLLGCCSDGSQRL--LVYEYMKNRSLDLLIYGESDKFLNWSTRFQIIL 188
++ +++ N++ L D R LV+E++ N L +D + RF +
Sbjct: 84 ILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTD----YDIRF-YMY 138
Query: 189 GIARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQS-KIGDFGLARFFPEDQAYLSTNFAG 247
I + L Y H I+HRD+K NV++D + + ++ D+GLA F+ Q Y
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR--VA 193
Query: 248 TLGYTAPEYAIRGELSEKA-DIYSFGVLVLEII 279
+ + PE + ++ + + D++S G ++ +I
Sbjct: 194 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 29/218 (13%)
Query: 82 KNFHPGNLLGRGGFGPV-----------YRGKLADGTLVAVKKLCVDKSQQGESEFLSEV 130
+N+ P +LGRG V Y K+ D T ++ Q+ L EV
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVT--GGGSFSAEEVQELREATLKEV 61
Query: 131 RMITSIQ-HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG 189
++ + H N+++L + LV++ MK +L Y L+ +I+
Sbjct: 62 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG--ELFDYLTEKVTLSEKETRKIMRA 119
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL 249
+ + LH+ IVHRD+K N+LLD+ K+ DFG + D GT
Sbjct: 120 LLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLREVCGTP 174
Query: 250 GYTAPEYAIRGELSE-------KADIYSFGVLVLEIIS 280
Y APE I +++ + D++S GV++ +++
Sbjct: 175 SYLAPE-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 29/218 (13%)
Query: 82 KNFHPGNLLGRGGFGPV-----------YRGKLADGTLVAVKKLCVDKSQQGESEFLSEV 130
+N+ P +LGRG V Y K+ D T ++ Q+ L EV
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVT--GGGSFSAEEVQELREATLKEV 74
Query: 131 RMITSIQ-HKNLVRLLGCCSDGSQRLLVYEYMKNRSLDLLIYGESDKFLNWSTRFQIILG 189
++ + H N+++L + LV++ MK +L Y L+ +I+
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG--ELFDYLTEKVTLSEKETRKIMRA 132
Query: 190 IARGLQYLHEDSHTRIVHRDIKASNVLLDEKFQSKIGDFGLARFFPEDQAYLSTNFAGTL 249
+ + LH+ IVHRD+K N+LLD+ K+ DFG + D GT
Sbjct: 133 LLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLREVCGTP 187
Query: 250 GYTAPEYAIRGELSE-------KADIYSFGVLVLEIIS 280
Y APE I +++ + D++S GV++ +++
Sbjct: 188 SYLAPE-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 27/199 (13%)
Query: 88 NLLGRGGFGPVYRGKLADGTLV--AVKKLCVDKSQQGESEFLSEVRMITSIQHKNLVRLL 145
N +GRG +G V + + GT + A KK+ + F E+ ++ S+ H N++RL
Sbjct: 15 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIP-KYFVEDVDRFKQEIEIMKSLDHPNIIRLY 72
Query: 146 GCCSDGSQRLLVYEY-----MKNRSLDLLIYGESDKFLNWSTRFQIILGIARGLQYLHED 200
D + LV E + R + ++ ESD +I+ + + Y H+
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA-------ARIMKDVLSAVAYCHK- 124
Query: 201 SHTRIVHRDIKASNVL-LDEKFQS--KIGDFGL-ARFFPEDQAYLSTNFAGTLGYTAPEY 256
+ HRD+K N L L + S K+ DFGL ARF P + GT Y +P+
Sbjct: 125 --LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP---GKMMRTKVGTPYYVSPQ- 178
Query: 257 AIRGELSEKADIYSFGVLV 275
+ G + D +S GV++
Sbjct: 179 VLEGLYGPECDEWSAGVMM 197
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,275,168
Number of Sequences: 62578
Number of extensions: 469262
Number of successful extensions: 3648
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 237
Number of HSP's that attempted gapping in prelim test: 1177
Number of HSP's gapped (non-prelim): 1145
length of query: 407
length of database: 14,973,337
effective HSP length: 101
effective length of query: 306
effective length of database: 8,652,959
effective search space: 2647805454
effective search space used: 2647805454
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)